TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 132 |
| AciI | CCGC | 1 cut(s) | 130 |
| AclWI | GGATC | 1 cut(s) | 42 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 65 |
| AgsI | TTSAA | 3 cut(s) | 80, 125, 281 |
| AluBI | AGCT | 1 cut(s) | 223 |
| AluI | AGCT | 1 cut(s) | 223 |
| Alw26I | GTCTC | 1 cut(s) | 24 |
| AlwI | GGATC | 1 cut(s) | 42 |
| AseI | ATTAAT | 1 cut(s) | 261 |
| AspLEI | GCGC | 1 cut(s) | 58 |
| AspS9I | GGNCC | 1 cut(s) | 190 |
| AvaII | GGWCC | 1 cut(s) | 190 |
| BauI | CACGAG | 1 cut(s) | 26 |
| BccI | CCATC | 2 cut(s) | 59, 111 |
| BcoDI | GTCTC | 1 cut(s) | 24 |
| BfaI | CTAG | 1 cut(s) | 306 |
| Bme18I | GGWCC | 1 cut(s) | 190 |
| BmgT120I | GGNCC | 1 cut(s) | 190 |
| BmiI | GGNNCC | 2 cut(s) | 191, 377 |
| BmsI | GCATC | 2 cut(s) | 59, 311 |
| BsaI | GGTCTC | 1 cut(s) | 24 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 65 |
| Bse3DI | GCAATG | 1 cut(s) | 256 |
| BseGI | GGATG | 2 cut(s) | 74, 301 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseMI | GCAATG | 1 cut(s) | 256 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BsmAI | GTCTC | 1 cut(s) | 24 |
| Bso31I | GGTCTC | 1 cut(s) | 24 |
| Bsp143I | GATC | 1 cut(s) | 34 |
| BspACI | CCGC | 1 cut(s) | 130 |
| BspHI | TCATGA | 1 cut(s) | 389 |
| BspLI | GGNNCC | 2 cut(s) | 191, 377 |
| BspPI | GGATC | 1 cut(s) | 42 |
| BspQI | GCTCTTC | 1 cut(s) | 330 |
| BspTNI | GGTCTC | 1 cut(s) | 24 |
| BsrBI | CCGCTC | 1 cut(s) | 132 |
| BsrDI | GCAATG | 1 cut(s) | 256 |
| BssMI | GATC | 1 cut(s) | 34 |
| BssSI | CACGAG | 1 cut(s) | 26 |
| Bst2BI | CACGAG | 1 cut(s) | 26 |
| Bst6I | CTCTTC | 2 cut(s) | 173, 330 |
| BstF5I | GGATG | 2 cut(s) | 74, 301 |
| BstHHI | GCGC | 1 cut(s) | 58 |
| BstKTI | GATC | 1 cut(s) | 37 |
| BstMAI | GTCTC | 1 cut(s) | 24 |
| BstMBI | GATC | 1 cut(s) | 34 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 255, 320 |
| BtsCI | GGATG | 2 cut(s) | 74, 301 |
| CciI | TCATGA | 1 cut(s) | 389 |
| CfoI | GCGC | 1 cut(s) | 58 |
| Cfr13I | GGNCC | 1 cut(s) | 190 |
| CviAII | CATG | 1 cut(s) | 390 |
| CviJI | RGCY | 3 cut(s) | 223, 276, 323 |
| CviKI_1 | RGCY | 3 cut(s) | 223, 276, 323 |
| DpnI | GATC | 1 cut(s) | 36 |
| DpnII | GATC | 1 cut(s) | 34 |
| Eam1104I | CTCTTC | 2 cut(s) | 173, 330 |
| EarI | CTCTTC | 2 cut(s) | 173, 330 |
| Eco31I | GGTCTC | 1 cut(s) | 24 |
| Eco32I | GATATC | 1 cut(s) | 97 |
| Eco47I | GGWCC | 1 cut(s) | 190 |
| EcoRV | GATATC | 1 cut(s) | 97 |
| FaeI | CATG | 1 cut(s) | 393 |
| FaiI | YATR | 7 cut(s) | 54, 197, 202, 204, 288, 385, 391 |
| FatI | CATG | 1 cut(s) | 389 |
| FauI | CCCGC | 1 cut(s) | 137 |
| FokI | GGATG | 2 cut(s) | 81, 308 |
| FspBI | CTAG | 1 cut(s) | 306 |
| GlaI | GCGC | 1 cut(s) | 57 |
| HhaI | GCGC | 1 cut(s) | 58 |
| Hin1II | CATG | 1 cut(s) | 393 |
| Hin6I | GCGC | 1 cut(s) | 56 |
| HinP1I | GCGC | 1 cut(s) | 56 |
| HinfI | GANTC | 1 cut(s) | 125 |
| Hpy188I | TCNGA | 1 cut(s) | 34 |
| Hpy188III | TCNNGA | 2 cut(s) | 353, 390 |
| HpyAV | CCTTC | 1 cut(s) | 287 |
| HpyCH4V | TGCA | 2 cut(s) | 172, 314 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 255, 320 |
| Hsp92II | CATG | 1 cut(s) | 393 |
| HspAI | GCGC | 1 cut(s) | 56 |
| Kzo9I | GATC | 1 cut(s) | 34 |
| LguI | GCTCTTC | 1 cut(s) | 330 |
| LmnI | GCTCC | 1 cut(s) | 137 |
| LpnPI | CCDG | 3 cut(s) | 92, 148, 305 |
| LweI | GCATC | 2 cut(s) | 59, 311 |
| MaeI | CTAG | 1 cut(s) | 306 |
| MalI | GATC | 1 cut(s) | 36 |
| MbiI | CCGCTC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 34 |
| MboII | GAAGA | 4 cut(s) | 104, 190, 221, 317 |
| MluCI | AATT | 3 cut(s) | 165, 262, 336 |
| MmeI | TCCRAC | 1 cut(s) | 12 |
| MnlI | CCTC | 5 cut(s) | 154, 174, 199, 286, 360 |
| MseI | TTAA | 3 cut(s) | 239, 261, 339 |
| MslI | CAYNNNNRTG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 255, 320 |
| NdeII | GATC | 1 cut(s) | 34 |
| NlaIII | CATG | 1 cut(s) | 393 |
| NlaIV | GGNNCC | 2 cut(s) | 191, 377 |
| PagI | TCATGA | 1 cut(s) | 389 |
| PciSI | GCTCTTC | 1 cut(s) | 330 |
| PfeI | GAWTC | 1 cut(s) | 125 |
| PshBI | ATTAAT | 1 cut(s) | 261 |
| PspN4I | GGNNCC | 2 cut(s) | 191, 377 |
| PspPI | GGNCC | 1 cut(s) | 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 288 |
| SapI | GCTCTTC | 1 cut(s) | 330 |
| SaqAI | TTAA | 3 cut(s) | 239, 261, 339 |
| Sau3AI | GATC | 1 cut(s) | 34 |
| Sau96I | GGNCC | 1 cut(s) | 190 |
| SetI | ASST | 3 cut(s) | 111, 185, 225 |
| SfaNI | GCATC | 2 cut(s) | 59, 311 |
| SinI | GGWCC | 1 cut(s) | 190 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 288 |
| Sse9I | AATT | 3 cut(s) | 165, 262, 336 |
| SsiI | CCGC | 1 cut(s) | 130 |
| SspMI | CTAG | 1 cut(s) | 306 |
| TaqI | TCGA | 1 cut(s) | 140 |
| TasI | AATT | 3 cut(s) | 165, 262, 336 |
| TfiI | GAWTC | 1 cut(s) | 125 |
| Tru1I | TTAA | 3 cut(s) | 239, 261, 339 |
| Tru9I | TTAA | 3 cut(s) | 239, 261, 339 |
| TspDTI | ATGAA | 2 cut(s) | 312, 378 |
| TspGWI | ACGGA | 1 cut(s) | 182 |
| VpaK11BI | GGWCC | 1 cut(s) | 190 |
| VspI | ATTAAT | 1 cut(s) | 261 |
| XspI | CTAG | 1 cut(s) | 306 |