TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 31 - 169 | 8e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 89 |
| Acc36I | ACCTGC | 1 cut(s) | 451 |
| AccB1I | GGYRCC | 1 cut(s) | 578 |
| AccII | CGCG | 1 cut(s) | 557 |
| AciI | CCGC | 4 cut(s) | 32, 43, 557, 615 |
| AclWI | GGATC | 2 cut(s) | 254, 525 |
| AcsI | RAATTY | 1 cut(s) | 105 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 388 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 229 |
| AjnI | CCWGG | 1 cut(s) | 94 |
| AluBI | AGCT | 4 cut(s) | 26, 218, 447, 511 |
| AluI | AGCT | 4 cut(s) | 26, 218, 447, 511 |
| Alw21I | GWGCWC | 2 cut(s) | 208, 487 |
| Alw26I | GTCTC | 1 cut(s) | 132 |
| Alw44I | GTGCAC | 1 cut(s) | 483 |
| AlwI | GGATC | 2 cut(s) | 254, 525 |
| ApaLI | GTGCAC | 1 cut(s) | 483 |
| ApeKI | GCWGC | 2 cut(s) | 540, 605 |
| ApoI | RAATTY | 1 cut(s) | 105 |
| AspLEI | GCGC | 1 cut(s) | 14 |
| AspS9I | GGNCC | 1 cut(s) | 477 |
| AsuHPI | GGTGA | 2 cut(s) | 150, 347 |
| AvaII | GGWCC | 1 cut(s) | 477 |
| BaeGI | GKGCMC | 1 cut(s) | 487 |
| BanI | GGYRCC | 1 cut(s) | 578 |
| Bbv12I | GWGCWC | 2 cut(s) | 208, 487 |
| BbvI | GCAGC | 2 cut(s) | 552, 617 |
| BccI | CCATC | 1 cut(s) | 90 |
| BciT130I | CCWGG | 1 cut(s) | 96 |
| BclI | TGATCA | 1 cut(s) | 513 |
| BcoDI | GTCTC | 1 cut(s) | 132 |
| BfmI | CTRYAG | 1 cut(s) | 648 |
| BfoI | RGCGCY | 1 cut(s) | 15 |
| BfuAI | ACCTGC | 1 cut(s) | 451 |
| BisI | GCNGC | 3 cut(s) | 541, 558, 606 |
| BlsI | GCNGC | 3 cut(s) | 542, 559, 607 |
| Bme1390I | CCNGG | 1 cut(s) | 96 |
| Bme18I | GGWCC | 1 cut(s) | 477 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 1 cut(s) | 477 |
| BmiI | GGNNCC | 4 cut(s) | 328, 478, 479, 580 |
| BmrFI | CCNGG | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 1 cut(s) | 38 |
| BpuEI | CTTGAG | 2 cut(s) | 71, 204 |
| BsaBI | GATNNNNATC | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 2 cut(s) | 95, 582 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 388 |
| Bse8I | GATNNNNATC | 1 cut(s) | 270 |
| BseBI | CCWGG | 1 cut(s) | 96 |
| BseDI | CCNNGG | 2 cut(s) | 95, 582 |
| BseGI | GGATG | 1 cut(s) | 571 |
| BseJI | GATNNNNATC | 1 cut(s) | 270 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BseMII | CTCAG | 2 cut(s) | 102, 141 |
| BseSI | GKGCMC | 1 cut(s) | 487 |
| BseXI | GCAGC | 2 cut(s) | 552, 617 |
| Bsh1236I | CGCG | 1 cut(s) | 557 |
| BshNI | GGYRCC | 1 cut(s) | 578 |
| BsiHKAI | GWGCWC | 2 cut(s) | 208, 487 |
| BsiSI | CCGG | 1 cut(s) | 389 |
| BslFI | GGGAC | 1 cut(s) | 463 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BsmAI | GTCTC | 1 cut(s) | 132 |
| BsmFI | GGGAC | 1 cut(s) | 463 |
| Bsp1286I | GDGCHC | 2 cut(s) | 208, 487 |
| Bsp143I | GATC | 4 cut(s) | 259, 352, 513, 530 |
| Bsp19I | CCATGG | 1 cut(s) | 582 |
| BspACI | CCGC | 4 cut(s) | 32, 43, 557, 615 |
| BspCNI | CTCAG | 2 cut(s) | 103, 142 |
| BspFNI | CGCG | 1 cut(s) | 557 |
| BspLI | GGNNCC | 4 cut(s) | 328, 478, 479, 580 |
| BspMAI | CTGCAG | 1 cut(s) | 652 |
| BspMI | ACCTGC | 1 cut(s) | 451 |
| BspPI | GGATC | 2 cut(s) | 254, 525 |
| BspQI | GCTCTTC | 1 cut(s) | 501 |
| BspT107I | GGYRCC | 1 cut(s) | 578 |
| BssECI | CCNNGG | 2 cut(s) | 95, 582 |
| BssMI | GATC | 4 cut(s) | 259, 352, 513, 530 |
| BssT1I | CCWWGG | 1 cut(s) | 582 |
| Bst2UI | CCWGG | 1 cut(s) | 96 |
| Bst4CI | ACNGT | 1 cut(s) | 383 |
| Bst6I | CTCTTC | 2 cut(s) | 501, 594 |
| BstDEI | CTNAG | 3 cut(s) | 38, 111, 150 |
| BstDSI | CCRYGG | 1 cut(s) | 582 |
| BstF5I | GGATG | 1 cut(s) | 571 |
| BstFNI | CGCG | 1 cut(s) | 557 |
| BstH2I | RGCGCY | 1 cut(s) | 15 |
| BstHHI | GCGC | 1 cut(s) | 14 |
| BstKTI | GATC | 4 cut(s) | 262, 355, 516, 533 |
| BstMAI | GTCTC | 1 cut(s) | 132 |
| BstMBI | GATC | 4 cut(s) | 259, 352, 513, 530 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 203 |
| BstNI | CCWGG | 1 cut(s) | 96 |
| BstNSI | RCATGY | 1 cut(s) | 174 |
| BstSCI | CCNGG | 1 cut(s) | 94 |
| BstSFI | CTRYAG | 1 cut(s) | 648 |
| BstSLI | GKGCMC | 1 cut(s) | 487 |
| BstUI | CGCG | 1 cut(s) | 557 |
| BstV1I | GCAGC | 2 cut(s) | 552, 617 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| BtgI | CCRYGG | 1 cut(s) | 582 |
| BtgZI | GCGATG | 1 cut(s) | 414 |
| BtsCI | GGATG | 1 cut(s) | 571 |
| BveI | ACCTGC | 1 cut(s) | 451 |
| CfoI | GCGC | 1 cut(s) | 14 |
| Cfr13I | GGNCC | 1 cut(s) | 477 |
| CviAII | CATG | 4 cut(s) | 171, 277, 502, 583 |
| CviJI | RGCY | 5 cut(s) | 26, 218, 447, 511, 560 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 218, 447, 511, 560 |
| DdeI | CTNAG | 3 cut(s) | 38, 111, 150 |
| DpnI | GATC | 4 cut(s) | 261, 354, 515, 532 |
| DpnII | GATC | 4 cut(s) | 259, 352, 513, 530 |
| DriI | GACNNNNNGTC | 1 cut(s) | 229 |
| Eam1104I | CTCTTC | 2 cut(s) | 501, 594 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 229 |
| EarI | CTCTTC | 2 cut(s) | 501, 594 |
| Eco130I | CCWWGG | 1 cut(s) | 582 |
| Eco32I | GATATC | 1 cut(s) | 268 |
| Eco47I | GGWCC | 1 cut(s) | 477 |
| EcoO109I | RGGNCCY | 1 cut(s) | 477 |
| EcoRII | CCWGG | 1 cut(s) | 94 |
| EcoRV | GATATC | 1 cut(s) | 268 |
| EcoT14I | CCWWGG | 1 cut(s) | 582 |
| EcoT22I | ATGCAT | 2 cut(s) | 78, 172 |
| ErhI | CCWWGG | 1 cut(s) | 582 |
| FaeI | CATG | 4 cut(s) | 174, 280, 505, 586 |
| FaqI | GGGAC | 1 cut(s) | 463 |
| FatI | CATG | 4 cut(s) | 170, 276, 501, 582 |
| FauI | CCCGC | 1 cut(s) | 36 |
| FauNDI | CATATG | 1 cut(s) | 395 |
| FbaI | TGATCA | 1 cut(s) | 513 |
| Fnu4HI | GCNGC | 3 cut(s) | 541, 558, 606 |
| FokI | GGATG | 1 cut(s) | 578 |
| Fsp4HI | GCNGC | 3 cut(s) | 541, 558, 606 |
| GlaI | GCGC | 1 cut(s) | 13 |
| GluI | GCNGC | 3 cut(s) | 541, 558, 606 |
| HaeII | RGCGCY | 1 cut(s) | 15 |
| HapII | CCGG | 1 cut(s) | 389 |
| HhaI | GCGC | 1 cut(s) | 14 |
| Hin1II | CATG | 4 cut(s) | 174, 280, 505, 586 |
| Hin6I | GCGC | 1 cut(s) | 12 |
| HinP1I | GCGC | 1 cut(s) | 12 |
| HinfI | GANTC | 1 cut(s) | 140 |
| HpaII | CCGG | 1 cut(s) | 389 |
| HphI | GGTGA | 2 cut(s) | 150, 347 |
| Hpy166II | GTNNAC | 2 cut(s) | 485, 553 |
| Hpy188I | TCNGA | 3 cut(s) | 352, 422, 631 |
| Hpy188III | TCNNGA | 3 cut(s) | 110, 221, 263 |
| Hpy8I | GTNNAC | 2 cut(s) | 485, 553 |
| Hpy99I | CGWCG | 1 cut(s) | 638 |
| HpyAV | CCTTC | 2 cut(s) | 171, 569 |
| HpyCH4III | ACNGT | 1 cut(s) | 383 |
| HpyCH4V | TGCA | 5 cut(s) | 76, 170, 460, 485, 650 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 203 |
| HpyF3I | CTNAG | 3 cut(s) | 38, 111, 150 |
| Hsp92II | CATG | 4 cut(s) | 174, 280, 505, 586 |
| HspAI | GCGC | 1 cut(s) | 12 |
| KflI | GGGWCCC | 1 cut(s) | 477 |
| Ksp22I | TGATCA | 1 cut(s) | 513 |
| Kzo9I | GATC | 4 cut(s) | 259, 352, 513, 530 |
| LguI | GCTCTTC | 1 cut(s) | 501 |
| LpnPI | CCDG | 6 cut(s) | 81, 108, 123, 276, 402, 446 |
| Lsp1109I | GCAGC | 2 cut(s) | 552, 617 |
| MaeIII | GTNAC | 1 cut(s) | 156 |
| MalI | GATC | 4 cut(s) | 261, 354, 515, 532 |
| MboI | GATC | 4 cut(s) | 259, 352, 513, 530 |
| MboII | GAAGA | 3 cut(s) | 304, 518, 611 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MhlI | GDGCHC | 2 cut(s) | 208, 487 |
| MluCI | AATT | 5 cut(s) | 90, 105, 210, 342, 432 |
| MlyI | GAGTC | 1 cut(s) | 134 |
| MnlI | CCTC | 7 cut(s) | 46, 72, 298, 397, 431, 595, 637 |
| Mph1103I | ATGCAT | 2 cut(s) | 78, 172 |
| MspI | CCGG | 1 cut(s) | 389 |
| MspR9I | CCNGG | 1 cut(s) | 96 |
| MvaI | CCWGG | 1 cut(s) | 96 |
| MvnI | CGCG | 1 cut(s) | 557 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 203 |
| NcoI | CCATGG | 1 cut(s) | 582 |
| NdeI | CATATG | 1 cut(s) | 395 |
| NdeII | GATC | 4 cut(s) | 259, 352, 513, 530 |
| NlaIII | CATG | 4 cut(s) | 174, 280, 505, 586 |
| NlaIV | GGNNCC | 4 cut(s) | 328, 478, 479, 580 |
| NmuCI | GTSAC | 1 cut(s) | 156 |
| NsiI | ATGCAT | 2 cut(s) | 78, 172 |
| NspI | RCATGY | 1 cut(s) | 174 |
| PciSI | GCTCTTC | 1 cut(s) | 501 |
| PkrI | GCNGC | 3 cut(s) | 542, 559, 607 |
| PleI | GAGTC | 1 cut(s) | 134 |
| PpsI | GAGTC | 1 cut(s) | 134 |
| PpuMI | RGGWCCY | 1 cut(s) | 477 |
| PsiI | TTATAA | 1 cut(s) | 89 |
| Psp5II | RGGWCCY | 1 cut(s) | 477 |
| Psp6I | CCWGG | 1 cut(s) | 94 |
| PspGI | CCWGG | 1 cut(s) | 94 |
| PspN4I | GGNNCC | 4 cut(s) | 328, 478, 479, 580 |
| PspPI | GGNCC | 1 cut(s) | 477 |
| PspPPI | RGGWCCY | 1 cut(s) | 477 |
| PstI | CTGCAG | 1 cut(s) | 652 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| SapI | GCTCTTC | 1 cut(s) | 501 |
| SatI | GCNGC | 3 cut(s) | 541, 558, 606 |
| Sau3AI | GATC | 4 cut(s) | 259, 352, 513, 530 |
| Sau96I | GGNCC | 1 cut(s) | 477 |
| SchI | GAGTC | 1 cut(s) | 134 |
| ScrFI | CCNGG | 1 cut(s) | 96 |
| SduI | GDGCHC | 2 cut(s) | 208, 487 |
| SfcI | CTRYAG | 1 cut(s) | 648 |
| SinI | GGWCC | 1 cut(s) | 477 |
| SmlI | CTYRAG | 2 cut(s) | 50, 219 |
| SmoI | CTYRAG | 2 cut(s) | 50, 219 |
| Sse9I | AATT | 5 cut(s) | 90, 105, 210, 342, 432 |
| SsiI | CCGC | 4 cut(s) | 32, 43, 557, 615 |
| SspI | AATATT | 1 cut(s) | 641 |
| StyD4I | CCNGG | 1 cut(s) | 94 |
| StyI | CCWWGG | 1 cut(s) | 582 |
| TaaI | ACNGT | 1 cut(s) | 383 |
| TaqI | TCGA | 2 cut(s) | 143, 430 |
| TasI | AATT | 5 cut(s) | 90, 105, 210, 342, 432 |
| TauI | GCSGC | 1 cut(s) | 560 |
| TseFI | GTSAC | 1 cut(s) | 156 |
| TseI | GCWGC | 2 cut(s) | 540, 605 |
| Tsp45I | GTSAC | 1 cut(s) | 156 |
| TspDTI | ATGAA | 2 cut(s) | 539, 582 |
| TspGWI | ACGGA | 2 cut(s) | 219, 239 |
| VneI | GTGCAC | 1 cut(s) | 483 |
| VpaK11BI | GGWCC | 1 cut(s) | 477 |
| XapI | RAATTY | 1 cut(s) | 105 |
| XceI | RCATGY | 1 cut(s) | 174 |
| Zsp2I | ATGCAT | 2 cut(s) | 78, 172 |