TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 109 - 196 | 3.3e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 115 - 317 | 6.8e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 223 - 297 | 1.6e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 369 - 412 | 3e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 846 |
| AccB1I | GGYRCC | 1 cut(s) | 864 |
| AccBSI | CCGCTC | 1 cut(s) | 1243 |
| AccI | GTMKAC | 2 cut(s) | 808, 912 |
| AciI | CCGC | 2 cut(s) | 1241, 1247 |
| AclWI | GGATC | 2 cut(s) | 613, 1362 |
| AcoI | YGGCCR | 1 cut(s) | 945 |
| AcsI | RAATTY | 3 cut(s) | 569, 1119, 1295 |
| AcuI | CTGAAG | 2 cut(s) | 41, 753 |
| AfaI | GTAC | 1 cut(s) | 1133 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 1147 |
| AflIII | ACRYGT | 1 cut(s) | 175 |
| AjnI | CCWGG | 2 cut(s) | 1108, 1177 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1280, 1312 |
| AluBI | AGCT | 7 cut(s) | 139, 153, 454, 502, 892, 1023, 1171 |
| AluI | AGCT | 7 cut(s) | 139, 153, 454, 502, 892, 1023, 1171 |
| Alw26I | GTCTC | 1 cut(s) | 162 |
| AlwI | GGATC | 2 cut(s) | 613, 1362 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 139 |
| Ama87I | CYCGRG | 1 cut(s) | 815 |
| AoxI | GGCC | 1 cut(s) | 945 |
| ApeKI | GCWGC | 1 cut(s) | 1171 |
| ApoI | RAATTY | 3 cut(s) | 569, 1119, 1295 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 631, 663 |
| AseI | ATTAAT | 1 cut(s) | 219 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 140 |
| AsuHPI | GGTGA | 2 cut(s) | 591, 1130 |
| AsuII | TTCGAA | 1 cut(s) | 144 |
| AvaI | CYCGRG | 1 cut(s) | 815 |
| AxyI | CCTNAGG | 1 cut(s) | 45 |
| BalI | TGGCCA | 1 cut(s) | 947 |
| BanI | GGYRCC | 1 cut(s) | 864 |
| BbsI | GAAGAC | 3 cut(s) | 759, 842, 1146 |
| BbvI | GCAGC | 1 cut(s) | 1158 |
| BccI | CCATC | 5 cut(s) | 109, 124, 544, 904, 1195 |
| BceAI | ACGGC | 1 cut(s) | 256 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 648, 682, 1265, 1299 |
| BciT130I | CCWGG | 2 cut(s) | 1110, 1179 |
| BciVI | GTATCC | 1 cut(s) | 108 |
| BcoDI | GTCTC | 1 cut(s) | 162 |
| BfaI | CTAG | 2 cut(s) | 837, 977 |
| BfuI | GTATCC | 1 cut(s) | 108 |
| BglII | AGATCT | 1 cut(s) | 427 |
| BisI | GCNGC | 1 cut(s) | 1172 |
| BlsI | GCNGC | 1 cut(s) | 1173 |
| Bme1390I | CCNGG | 2 cut(s) | 1110, 1179 |
| BmeT110I | CYCGRG | 1 cut(s) | 815 |
| BmiI | GGNNCC | 2 cut(s) | 38, 866 |
| BmrFI | CCNGG | 2 cut(s) | 1110, 1179 |
| BmrI | ACTGGG | 1 cut(s) | 741 |
| BmsI | GCATC | 3 cut(s) | 749, 831, 1183 |
| BmuI | ACTGGG | 1 cut(s) | 741 |
| BpiI | GAAGAC | 3 cut(s) | 759, 842, 1146 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 217, 249 |
| Bpu14I | TTCGAA | 1 cut(s) | 144 |
| BpuEI | CTTGAG | 1 cut(s) | 299 |
| BsaBI | GATNNNNATC | 1 cut(s) | 432 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 1147 |
| Bse1I | ACTGG | 2 cut(s) | 747, 1011 |
| Bse21I | CCTNAGG | 1 cut(s) | 45 |
| Bse3DI | GCAATG | 2 cut(s) | 747, 1043 |
| Bse8I | GATNNNNATC | 1 cut(s) | 432 |
| BseBI | CCWGG | 2 cut(s) | 1110, 1179 |
| BseGI | GGATG | 6 cut(s) | 475, 536, 590, 764, 1174, 1206 |
| BseJI | GATNNNNATC | 1 cut(s) | 432 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 1147 |
| BseMI | GCAATG | 2 cut(s) | 747, 1043 |
| BseMII | CTCAG | 4 cut(s) | 146, 215, 802, 1271 |
| BseNI | ACTGG | 2 cut(s) | 747, 1011 |
| BseRI | GAGGAG | 1 cut(s) | 1223 |
| BseXI | GCAGC | 1 cut(s) | 1158 |
| BshFI | GGCC | 1 cut(s) | 947 |
| BshNI | GGYRCC | 1 cut(s) | 864 |
| BsiHKCI | CYCGRG | 1 cut(s) | 815 |
| BsiSI | CCGG | 2 cut(s) | 467, 656 |
| BslFI | GGGAC | 1 cut(s) | 63 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 1147 |
| BsmAI | GTCTC | 1 cut(s) | 162 |
| BsmFI | GGGAC | 1 cut(s) | 63 |
| BsmI | GAATGC | 1 cut(s) | 691 |
| BsnI | GGCC | 1 cut(s) | 947 |
| BsoBI | CYCGRG | 1 cut(s) | 815 |
| Bsp119I | TTCGAA | 1 cut(s) | 144 |
| Bsp143I | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| BspACI | CCGC | 2 cut(s) | 1241, 1247 |
| BspANI | GGCC | 1 cut(s) | 947 |
| BspCNI | CTCAG | 4 cut(s) | 145, 216, 801, 1272 |
| BspLI | GGNNCC | 2 cut(s) | 38, 866 |
| BspPI | GGATC | 2 cut(s) | 613, 1362 |
| BspT104I | TTCGAA | 1 cut(s) | 144 |
| BspT107I | GGYRCC | 1 cut(s) | 864 |
| BsrBI | CCGCTC | 1 cut(s) | 1243 |
| BsrDI | GCAATG | 2 cut(s) | 747, 1043 |
| BsrI | ACTGG | 2 cut(s) | 747, 1011 |
| BssMI | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| Bst2UI | CCWGG | 2 cut(s) | 1110, 1179 |
| Bst4CI | ACNGT | 5 cut(s) | 355, 848, 998, 1147, 1165 |
| BstBI | TTCGAA | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 1 cut(s) | 1213 |
| BstDEI | CTNAG | 7 cut(s) | 45, 132, 149, 224, 713, 788, 1280 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 44 |
| BstF5I | GGATG | 6 cut(s) | 475, 536, 590, 764, 1174, 1206 |
| BstKTI | GATC | 5 cut(s) | 430, 621, 779, 1315, 1357 |
| BstMAI | GTCTC | 1 cut(s) | 162 |
| BstMBI | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| BstNI | CCWGG | 2 cut(s) | 1110, 1179 |
| BstNSI | RCATGY | 1 cut(s) | 179 |
| BstSCI | CCNGG | 2 cut(s) | 1108, 1177 |
| BstV1I | GCAGC | 1 cut(s) | 1158 |
| BstV2I | GAAGAC | 3 cut(s) | 759, 842, 1146 |
| BstX2I | RGATCY | 1 cut(s) | 427 |
| BstYI | RGATCY | 1 cut(s) | 427 |
| Bsu36I | CCTNAGG | 1 cut(s) | 45 |
| BsuI | GTATCC | 1 cut(s) | 108 |
| BsuRI | GGCC | 1 cut(s) | 947 |
| BtgZI | GCGATG | 1 cut(s) | 102 |
| BtsCI | GGATG | 6 cut(s) | 475, 536, 590, 764, 1174, 1206 |
| BtsI | GCAGTG | 1 cut(s) | 406 |
| BtsIMutI | CAGTG | 2 cut(s) | 406, 754 |
| Cac8I | GCNNGC | 1 cut(s) | 1213 |
| CaiI | CAGNNNCTG | 1 cut(s) | 139 |
| CseI | GACGC | 1 cut(s) | 923 |
| Csp6I | GTAC | 1 cut(s) | 1132 |
| CviAII | CATG | 4 cut(s) | 176, 482, 609, 902 |
| CviQI | GTAC | 1 cut(s) | 1132 |
| DdeI | CTNAG | 7 cut(s) | 45, 132, 149, 224, 713, 788, 1280 |
| DpnI | GATC | 5 cut(s) | 429, 620, 778, 1314, 1356 |
| DpnII | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| DraI | TTTAAA | 1 cut(s) | 262 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 846 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 846 |
| EaeI | YGGCCR | 1 cut(s) | 945 |
| Eco57I | CTGAAG | 2 cut(s) | 41, 753 |
| Eco81I | CCTNAGG | 1 cut(s) | 45 |
| Eco88I | CYCGRG | 1 cut(s) | 815 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 44 |
| EcoRI | GAATTC | 1 cut(s) | 569 |
| EcoRII | CCWGG | 2 cut(s) | 1108, 1177 |
| FaeI | CATG | 4 cut(s) | 179, 485, 612, 905 |
| FaqI | GGGAC | 1 cut(s) | 63 |
| FatI | CATG | 4 cut(s) | 175, 481, 608, 901 |
| FauI | CCCGC | 1 cut(s) | 1254 |
| FblI | GTMKAC | 2 cut(s) | 808, 912 |
| Fnu4HI | GCNGC | 1 cut(s) | 1172 |
| FokI | GGATG | 6 cut(s) | 482, 523, 597, 771, 1161, 1213 |
| Fsp4HI | GCNGC | 1 cut(s) | 1172 |
| FspBI | CTAG | 2 cut(s) | 837, 977 |
| GluI | GCNGC | 1 cut(s) | 1172 |
| HaeIII | GGCC | 1 cut(s) | 947 |
| HapII | CCGG | 2 cut(s) | 467, 656 |
| HgaI | GACGC | 1 cut(s) | 923 |
| Hin1II | CATG | 4 cut(s) | 179, 485, 612, 905 |
| HincII | GTYRAC | 5 cut(s) | 247, 322, 830, 994, 1343 |
| HindII | GTYRAC | 5 cut(s) | 247, 322, 830, 994, 1343 |
| HindIII | AAGCTT | 2 cut(s) | 452, 500 |
| HinfI | GANTC | 9 cut(s) | 79, 226, 379, 596, 709, 874, 1015, 1206, 1230 |
| HpaI | GTTAAC | 1 cut(s) | 994 |
| HpaII | CCGG | 2 cut(s) | 467, 656 |
| HphI | GGTGA | 2 cut(s) | 591, 1130 |
| Hpy166II | GTNNAC | 8 cut(s) | 74, 247, 322, 809, 830, 913, 994, 1343 |
| Hpy188I | TCNGA | 6 cut(s) | 135, 183, 225, 733, 879, 1081 |
| Hpy188III | TCNNGA | 5 cut(s) | 83, 278, 293, 837, 1124 |
| Hpy8I | GTNNAC | 8 cut(s) | 74, 247, 322, 809, 830, 913, 994, 1343 |
| HpyAV | CCTTC | 4 cut(s) | 290, 974, 1260, 1314 |
| HpyCH4III | ACNGT | 5 cut(s) | 355, 848, 998, 1147, 1165 |
| HpyCH4IV | ACGT | 1 cut(s) | 941 |
| HpyCH4V | TGCA | 5 cut(s) | 375, 691, 723, 927, 1174 |
| HpyF3I | CTNAG | 7 cut(s) | 45, 132, 149, 224, 713, 788, 1280 |
| HpySE526I | ACGT | 1 cut(s) | 941 |
| Hsp92II | CATG | 4 cut(s) | 179, 485, 612, 905 |
| KspAI | GTTAAC | 1 cut(s) | 994 |
| Kzo9I | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| LmnI | GCTCC | 1 cut(s) | 1248 |
| Lsp1109I | GCAGC | 1 cut(s) | 1158 |
| LweI | GCATC | 3 cut(s) | 749, 831, 1183 |
| MaeI | CTAG | 2 cut(s) | 837, 977 |
| MaeII | ACGT | 1 cut(s) | 941 |
| MaeIII | GTNAC | 3 cut(s) | 597, 647, 716 |
| MalI | GATC | 5 cut(s) | 429, 620, 778, 1314, 1356 |
| MbiI | CCGCTC | 1 cut(s) | 1243 |
| MboI | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| MboII | GAAGA | 7 cut(s) | 34, 53, 746, 759, 842, 1146, 1360 |
| MfeI | CAATTG | 2 cut(s) | 330, 704 |
| MflI | RGATCY | 1 cut(s) | 427 |
| MlsI | TGGCCA | 1 cut(s) | 947 |
| MluNI | TGGCCA | 1 cut(s) | 947 |
| MlyI | GAGTC | 3 cut(s) | 235, 605, 1224 |
| MmeI | TCCRAC | 1 cut(s) | 1332 |
| MnlI | CCTC | 6 cut(s) | 87, 141, 310, 550, 572, 1244 |
| Mox20I | TGGCCA | 1 cut(s) | 947 |
| MroXI | GAANNNNTTC | 1 cut(s) | 140 |
| MscI | TGGCCA | 1 cut(s) | 947 |
| Msp20I | TGGCCA | 1 cut(s) | 947 |
| MspI | CCGG | 2 cut(s) | 467, 656 |
| MspR9I | CCNGG | 2 cut(s) | 1110, 1179 |
| MunI | CAATTG | 2 cut(s) | 330, 704 |
| Mva1269I | GAATGC | 1 cut(s) | 691 |
| MvaI | CCWGG | 2 cut(s) | 1110, 1179 |
| NdeII | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| NlaIII | CATG | 4 cut(s) | 179, 485, 612, 905 |
| NlaIV | GGNNCC | 2 cut(s) | 38, 866 |
| NmuCI | GTSAC | 3 cut(s) | 597, 647, 716 |
| NspI | RCATGY | 1 cut(s) | 179 |
| NspV | TTCGAA | 1 cut(s) | 144 |
| PacI | TTAATTAA | 1 cut(s) | 1269 |
| PciI | ACATGT | 1 cut(s) | 175 |
| PctI | GAATGC | 1 cut(s) | 691 |
| PdmI | GAANNNNTTC | 1 cut(s) | 140 |
| PfeI | GAWTC | 6 cut(s) | 79, 379, 709, 874, 1015, 1206 |
| PfoI | TCCNGGA | 1 cut(s) | 1108 |
| PkrI | GCNGC | 1 cut(s) | 1173 |
| PleI | GAGTC | 3 cut(s) | 234, 604, 1224 |
| PpsI | GAGTC | 3 cut(s) | 234, 604, 1224 |
| PscI | ACATGT | 1 cut(s) | 175 |
| PshBI | ATTAAT | 1 cut(s) | 219 |
| Psp6I | CCWGG | 2 cut(s) | 1108, 1177 |
| PspGI | CCWGG | 2 cut(s) | 1108, 1177 |
| PspN4I | GGNNCC | 2 cut(s) | 38, 866 |
| PstNI | CAGNNNCTG | 1 cut(s) | 139 |
| PsuI | RGATCY | 1 cut(s) | 427 |
| RsaI | GTAC | 1 cut(s) | 1133 |
| RsaNI | GTAC | 1 cut(s) | 1132 |
| SatI | GCNGC | 1 cut(s) | 1172 |
| Sau3AI | GATC | 5 cut(s) | 427, 618, 776, 1312, 1354 |
| SchI | GAGTC | 3 cut(s) | 235, 605, 1224 |
| ScrFI | CCNGG | 2 cut(s) | 1110, 1179 |
| SfaNI | GCATC | 3 cut(s) | 749, 831, 1183 |
| SfuI | TTCGAA | 1 cut(s) | 144 |
| SmlI | CTYRAG | 1 cut(s) | 278 |
| SmoI | CTYRAG | 1 cut(s) | 278 |
| SsiI | CCGC | 2 cut(s) | 1241, 1247 |
| SspI | AATATT | 1 cut(s) | 1092 |
| SspMI | CTAG | 2 cut(s) | 837, 977 |
| StyD4I | CCNGG | 2 cut(s) | 1108, 1177 |
| TaaI | ACNGT | 5 cut(s) | 355, 848, 998, 1147, 1165 |
| TaiI | ACGT | 1 cut(s) | 944 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TaqII | GACCGA | 1 cut(s) | 815 |
| TfiI | GAWTC | 6 cut(s) | 79, 379, 709, 874, 1015, 1206 |
| TscAI | CASTG | 2 cut(s) | 406, 754 |
| TseFI | GTSAC | 3 cut(s) | 597, 647, 716 |
| TseI | GCWGC | 1 cut(s) | 1171 |
| Tsp45I | GTSAC | 3 cut(s) | 597, 647, 716 |
| TspDTI | ATGAA | 7 cut(s) | 17, 684, 759, 921, 1032, 1131, 1296 |
| TspGWI | ACGGA | 1 cut(s) | 91 |
| TspRI | CASTG | 2 cut(s) | 406, 754 |
| VspI | ATTAAT | 1 cut(s) | 219 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 44 |
| XapI | RAATTY | 3 cut(s) | 569, 1119, 1295 |
| XbaI | TCTAGA | 1 cut(s) | 836 |
| XceI | RCATGY | 1 cut(s) | 179 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 903 |
| XmiI | GTMKAC | 2 cut(s) | 808, 912 |
| XmnI | GAANNNNTTC | 1 cut(s) | 140 |
| XspI | CTAG | 2 cut(s) | 837, 977 |