TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 202 | 2.2e-57 | TIR domain |
| TIR_2 | PF13676 | 23 - 119 | 6.7e-15 | TIR domain |
| NB-ARC | PF00931 | 210 - 374 | 2.7e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 442 - 512 | 9.9e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 757 - 842 | 4.6e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 904 - 1033 | 7.8e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 2764 |
| AccB1I | GGYRCC | 1 cut(s) | 2764 |
| AccI | GTMKAC | 1 cut(s) | 1024 |
| AccII | CGCG | 1 cut(s) | 250 |
| AciI | CCGC | 3 cut(s) | 97, 2523, 2916 |
| AclWI | GGATC | 9 cut(s) | 344, 357, 942, 1213, 1262, 1920, 2391, 2756, 2964 |
| AcoI | YGGCCR | 4 cut(s) | 471, 876, 960, 1552 |
| AcuI | CTGAAG | 9 cut(s) | 27, 1073, 1149, 1724, 2318, 2462, 2654, 3360, 3590 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AdeI | CACNNNGTG | 1 cut(s) | 273 |
| AfeI | AGCGCT | 1 cut(s) | 1296 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1133 |
| AflIII | ACRYGT | 2 cut(s) | 66, 3026 |
| AhlI | ACTAGT | 2 cut(s) | 1027, 3245 |
| AjiI | CACGTC | 1 cut(s) | 67 |
| AjnI | CCWGG | 5 cut(s) | 1549, 2086, 2713, 2833, 3542 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 963, 995, 1669, 1701, 2761, 2793 |
| Alw21I | GWGCWC | 2 cut(s) | 3082, 3108 |
| Alw26I | GTCTC | 1 cut(s) | 358 |
| AlwI | GGATC | 9 cut(s) | 344, 357, 942, 1213, 1262, 1920, 2391, 2756, 2964 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2319 |
| Ama87I | CYCGRG | 3 cut(s) | 3230, 3349, 3492 |
| Aor51HI | AGCGCT | 1 cut(s) | 1296 |
| AoxI | GGCC | 8 cut(s) | 390, 471, 876, 960, 1177, 1552, 1741, 2920 |
| ApeKI | GCWGC | 2 cut(s) | 2133, 2319 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| Asp718I | GGTACC | 1 cut(s) | 2764 |
| AspLEI | GCGC | 1 cut(s) | 1297 |
| AspS9I | GGNCC | 2 cut(s) | 112, 1742 |
| AsuC2I | CCSGG | 1 cut(s) | 83 |
| AsuII | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| AvaI | CYCGRG | 3 cut(s) | 3230, 3349, 3492 |
| AvaII | GGWCC | 1 cut(s) | 112 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1411, 1444 |
| BalI | TGGCCA | 3 cut(s) | 473, 878, 1554 |
| BamHI | GGATCC | 1 cut(s) | 349 |
| BanI | GGYRCC | 1 cut(s) | 2764 |
| BanII | GRGCYC | 1 cut(s) | 3108 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2748, 2780 |
| BbsI | GAAGAC | 3 cut(s) | 432, 704, 2044 |
| Bbv12I | GWGCWC | 2 cut(s) | 3082, 3108 |
| BbvI | GCAGC | 2 cut(s) | 2120, 2306 |
| BccI | CCATC | 8 cut(s) | 480, 863, 1307, 2026, 2618, 3301, 3362, 3513 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 377, 411, 2455, 2489 |
| BciT130I | CCWGG | 5 cut(s) | 1551, 2088, 2715, 2835, 3544 |
| BciVI | GTATCC | 2 cut(s) | 1800, 2084 |
| BclI | TGATCA | 2 cut(s) | 1276, 1864 |
| BcnI | CCSGG | 1 cut(s) | 83 |
| BcoDI | GTCTC | 1 cut(s) | 358 |
| BcuI | ACTAGT | 2 cut(s) | 1027, 3245 |
| BfmI | CTRYAG | 3 cut(s) | 131, 2611, 2657 |
| BfoI | RGCGCY | 1 cut(s) | 1298 |
| BfuI | GTATCC | 2 cut(s) | 1800, 2084 |
| BisI | GCNGC | 2 cut(s) | 2134, 2320 |
| BlsI | GCNGC | 2 cut(s) | 2135, 2321 |
| BmcAI | AGTACT | 1 cut(s) | 1889 |
| Bme1390I | CCNGG | 6 cut(s) | 83, 1551, 2088, 2715, 2835, 3544 |
| Bme18I | GGWCC | 1 cut(s) | 112 |
| BmeT110I | CYCGRG | 3 cut(s) | 3230, 3349, 3492 |
| BmgBI | CACGTC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 2 cut(s) | 112, 1742 |
| BmiI | GGNNCC | 6 cut(s) | 351, 1548, 2676, 2766, 3355, 3427 |
| BmrFI | CCNGG | 6 cut(s) | 83, 1551, 2088, 2715, 2835, 3544 |
| BmrI | ACTGGG | 2 cut(s) | 2936, 3271 |
| BmsI | GCATC | 8 cut(s) | 445, 581, 609, 1582, 1858, 2163, 3125, 3402 |
| BmuI | ACTGGG | 2 cut(s) | 2936, 3271 |
| BpiI | GAAGAC | 3 cut(s) | 432, 704, 2044 |
| Bpu14I | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| BpuEI | CTTGAG | 4 cut(s) | 1349, 1954, 1991, 2006 |
| BpuMI | CCSGG | 1 cut(s) | 83 |
| Bsa29I | ATCGAT | 1 cut(s) | 3133 |
| BsaBI | GATNNNNATC | 1 cut(s) | 933 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 6 cut(s) | 82, 387, 495, 2833, 2842, 3491 |
| BsaWI | WCCGGW | 1 cut(s) | 2900 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1133 |
| Bse118I | RCCGGY | 2 cut(s) | 2253, 2918 |
| Bse1I | ACTGG | 5 cut(s) | 954, 980, 1823, 2942, 3266 |
| Bse8I | GATNNNNATC | 1 cut(s) | 933 |
| BseBI | CCWGG | 5 cut(s) | 1551, 2088, 2715, 2835, 3544 |
| BseCI | ATCGAT | 1 cut(s) | 3133 |
| BseDI | CCNNGG | 6 cut(s) | 82, 387, 495, 2833, 2842, 3491 |
| BseGI | GGATG | 7 cut(s) | 491, 559, 661, 2014, 2464, 3312, 3417 |
| BseJI | GATNNNNATC | 1 cut(s) | 933 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1133 |
| BseMII | CTCAG | 9 cut(s) | 11, 600, 1312, 1530, 2047, 2249, 2326, 2938, 3183 |
| BseNI | ACTGG | 5 cut(s) | 954, 980, 1823, 2942, 3266 |
| BseRI | GAGGAG | 1 cut(s) | 1673 |
| BseXI | GCAGC | 2 cut(s) | 2120, 2306 |
| BsgI | GTGCAG | 1 cut(s) | 1266 |
| Bsh1236I | CGCG | 1 cut(s) | 250 |
| BshFI | GGCC | 8 cut(s) | 392, 473, 878, 962, 1179, 1554, 1743, 2922 |
| BshNI | GGYRCC | 1 cut(s) | 2764 |
| BshVI | ATCGAT | 1 cut(s) | 3133 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3082, 3108 |
| BsiHKCI | CYCGRG | 3 cut(s) | 3230, 3349, 3492 |
| BsiSI | CCGG | 5 cut(s) | 82, 963, 2254, 2901, 2919 |
| BslFI | GGGAC | 2 cut(s) | 173, 334 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1133 |
| BsmAI | GTCTC | 1 cut(s) | 358 |
| BsmFI | GGGAC | 2 cut(s) | 173, 334 |
| BsmI | GAATGC | 1 cut(s) | 308 |
| BsnI | GGCC | 8 cut(s) | 392, 473, 878, 962, 1179, 1554, 1743, 2922 |
| BsoBI | CYCGRG | 3 cut(s) | 3230, 3349, 3492 |
| Bsp119I | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| Bsp1286I | GDGCHC | 2 cut(s) | 3082, 3108 |
| Bsp1407I | TGTACA | 3 cut(s) | 1994, 3084, 3388 |
| Bsp68I | TCGCGA | 1 cut(s) | 250 |
| BspACI | CCGC | 3 cut(s) | 97, 2523, 2916 |
| BspANI | GGCC | 8 cut(s) | 392, 473, 878, 962, 1179, 1554, 1743, 2922 |
| BspCNI | CTCAG | 9 cut(s) | 12, 599, 1311, 1531, 2046, 2250, 2325, 2937, 3184 |
| BspDI | ATCGAT | 1 cut(s) | 3133 |
| BspFNI | CGCG | 1 cut(s) | 250 |
| BspLI | GGNNCC | 6 cut(s) | 351, 1548, 2676, 2766, 3355, 3427 |
| BspMAI | CTGCAG | 1 cut(s) | 135 |
| BspPI | GGATC | 9 cut(s) | 344, 357, 942, 1213, 1262, 1920, 2391, 2756, 2964 |
| BspQI | GCTCTTC | 1 cut(s) | 1092 |
| BspT104I | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| BspT107I | GGYRCC | 1 cut(s) | 2764 |
| BsrFI | RCCGGY | 2 cut(s) | 2253, 2918 |
| BsrGI | TGTACA | 3 cut(s) | 1994, 3084, 3388 |
| BsrI | ACTGG | 5 cut(s) | 954, 980, 1823, 2942, 3266 |
| BssAI | RCCGGY | 2 cut(s) | 2253, 2918 |
| BssECI | CCNNGG | 6 cut(s) | 82, 387, 495, 2833, 2842, 3491 |
| BssNAI | GTATAC | 1 cut(s) | 1025 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 2 cut(s) | 495, 2842 |
| Bst1107I | GTATAC | 1 cut(s) | 1025 |
| Bst2UI | CCWGG | 5 cut(s) | 1551, 2088, 2715, 2835, 3544 |
| Bst4CI | ACNGT | 6 cut(s) | 222, 469, 794, 1149, 1481, 2534 |
| Bst6I | CTCTTC | 4 cut(s) | 402, 822, 1092, 1809 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3048 |
| BstAUI | TGTACA | 3 cut(s) | 1994, 3084, 3388 |
| BstBI | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| BstC8I | GCNNGC | 6 cut(s) | 1646, 2213, 2419, 2920, 3049, 3565 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1131 |
| BstF5I | GGATG | 7 cut(s) | 491, 559, 661, 2014, 2464, 3312, 3417 |
| BstFNI | CGCG | 1 cut(s) | 250 |
| BstH2I | RGCGCY | 1 cut(s) | 1298 |
| BstHHI | GCGC | 1 cut(s) | 1297 |
| BstMAI | GTCTC | 1 cut(s) | 358 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1413, 2437, 2879, 3048 |
| BstNI | CCWGG | 5 cut(s) | 1551, 2088, 2715, 2835, 3544 |
| BstNSI | RCATGY | 5 cut(s) | 1359, 2215, 3030, 3051, 3567 |
| BstSCI | CCNGG | 6 cut(s) | 81, 1549, 2086, 2713, 2833, 3542 |
| BstSFI | CTRYAG | 3 cut(s) | 131, 2611, 2657 |
| BstUI | CGCG | 1 cut(s) | 250 |
| BstV1I | GCAGC | 2 cut(s) | 2120, 2306 |
| BstV2I | GAAGAC | 3 cut(s) | 432, 704, 2044 |
| BstX2I | RGATCY | 5 cut(s) | 349, 1205, 1267, 1912, 2383 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2571 |
| BstYI | RGATCY | 5 cut(s) | 349, 1205, 1267, 1912, 2383 |
| BstZ17I | GTATAC | 1 cut(s) | 1025 |
| Bsu15I | ATCGAT | 1 cut(s) | 3133 |
| BsuI | GTATCC | 2 cut(s) | 1800, 2084 |
| BsuRI | GGCC | 8 cut(s) | 392, 473, 878, 962, 1179, 1554, 1743, 2922 |
| BsuTUI | ATCGAT | 1 cut(s) | 3133 |
| BtrI | CACGTC | 1 cut(s) | 67 |
| BtsCI | GGATG | 7 cut(s) | 491, 559, 661, 2014, 2464, 3312, 3417 |
| BtsI | GCAGTG | 1 cut(s) | 140 |
| BtsIMutI | CAGTG | 5 cut(s) | 140, 474, 790, 1830, 2320 |
| BtuMI | TCGCGA | 1 cut(s) | 250 |
| Cac8I | GCNNGC | 6 cut(s) | 1646, 2213, 2419, 2920, 3049, 3565 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2319 |
| CfoI | GCGC | 1 cut(s) | 1297 |
| Cfr10I | RCCGGY | 2 cut(s) | 2253, 2918 |
| Cfr13I | GGNCC | 2 cut(s) | 112, 1742 |
| ClaI | ATCGAT | 1 cut(s) | 3133 |
| CsiI | ACCWGGT | 1 cut(s) | 3542 |
| DraI | TTTAAA | 4 cut(s) | 1291, 2052, 2281, 2937 |
| DraIII | CACNNNGTG | 1 cut(s) | 273 |
| EaeI | YGGCCR | 4 cut(s) | 471, 876, 960, 1552 |
| Eam1104I | CTCTTC | 4 cut(s) | 402, 822, 1092, 1809 |
| EarI | CTCTTC | 4 cut(s) | 402, 822, 1092, 1809 |
| Ecl136II | GAGCTC | 1 cut(s) | 3106 |
| Eco130I | CCWWGG | 2 cut(s) | 495, 2842 |
| Eco147I | AGGCCT | 2 cut(s) | 392, 1179 |
| Eco24I | GRGCYC | 1 cut(s) | 3108 |
| Eco32I | GATATC | 1 cut(s) | 769 |
| Eco47I | GGWCC | 1 cut(s) | 112 |
| Eco47III | AGCGCT | 1 cut(s) | 1296 |
| Eco53kI | GAGCTC | 1 cut(s) | 3106 |
| Eco57I | CTGAAG | 9 cut(s) | 27, 1073, 1149, 1724, 2318, 2462, 2654, 3360, 3590 |
| Eco88I | CYCGRG | 3 cut(s) | 3230, 3349, 3492 |
| EcoICRI | GAGCTC | 1 cut(s) | 3106 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1131 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1742 |
| EcoRII | CCWGG | 5 cut(s) | 1549, 2086, 2713, 2833, 3542 |
| EcoRV | GATATC | 1 cut(s) | 769 |
| EcoT14I | CCWWGG | 2 cut(s) | 495, 2842 |
| EcoT22I | ATGCAT | 2 cut(s) | 308, 1494 |
| EcoT38I | GRGCYC | 1 cut(s) | 3108 |
| ErhI | CCWWGG | 2 cut(s) | 495, 2842 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1329, 1361 |
| FaqI | GGGAC | 2 cut(s) | 173, 334 |
| FauI | CCCGC | 2 cut(s) | 104, 2923 |
| FauNDI | CATATG | 1 cut(s) | 1640 |
| FbaI | TGATCA | 2 cut(s) | 1276, 1864 |
| FblI | GTMKAC | 1 cut(s) | 1024 |
| Fnu4HI | GCNGC | 2 cut(s) | 2134, 2320 |
| FokI | GGATG | 7 cut(s) | 498, 546, 668, 2001, 2471, 3319, 3424 |
| FriOI | GRGCYC | 1 cut(s) | 3108 |
| Fsp4HI | GCNGC | 2 cut(s) | 2134, 2320 |
| GlaI | GCGC | 1 cut(s) | 1296 |
| GluI | GCNGC | 2 cut(s) | 2134, 2320 |
| HaeII | RGCGCY | 1 cut(s) | 1298 |
| HaeIII | GGCC | 8 cut(s) | 392, 473, 878, 962, 1179, 1554, 1743, 2922 |
| HapII | CCGG | 5 cut(s) | 82, 963, 2254, 2901, 2919 |
| HhaI | GCGC | 1 cut(s) | 1297 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 1 cut(s) | 1295 |
| HinP1I | GCGC | 1 cut(s) | 1295 |
| HincII | GTYRAC | 3 cut(s) | 1464, 2008, 2395 |
| HindII | GTYRAC | 3 cut(s) | 1464, 2008, 2395 |
| HindIII | AAGCTT | 1 cut(s) | 518 |
| HpaI | GTTAAC | 1 cut(s) | 1464 |
| HpaII | CCGG | 5 cut(s) | 82, 963, 2254, 2901, 2919 |
| Hpy166II | GTNNAC | 8 cut(s) | 1025, 1464, 2008, 2093, 2395, 3268, 3391, 3525 |
| Hpy8I | GTNNAC | 8 cut(s) | 1025, 1464, 2008, 2093, 2395, 3268, 3391, 3525 |
| Hpy99I | CGWCG | 2 cut(s) | 68, 1586 |
| HpyCH4III | ACNGT | 6 cut(s) | 222, 469, 794, 1149, 1481, 2534 |
| HpyCH4IV | ACGT | 4 cut(s) | 66, 1021, 1584, 2647 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1413, 2437, 2879, 3048 |
| HpySE526I | ACGT | 4 cut(s) | 66, 1021, 1584, 2647 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 1 cut(s) | 1295 |
| KpnI | GGTACC | 1 cut(s) | 2768 |
| KroI | GCCGGC | 1 cut(s) | 2918 |
| KroNI | GCCGGC | 1 cut(s) | 2920 |
| Ksp22I | TGATCA | 2 cut(s) | 1276, 1864 |
| KspAI | GTTAAC | 1 cut(s) | 1464 |
| LguI | GCTCTTC | 1 cut(s) | 1092 |
| LmnI | GCTCC | 5 cut(s) | 378, 1546, 3253, 3335, 3431 |
| Lsp1109I | GCAGC | 2 cut(s) | 2120, 2306 |
| LweI | GCATC | 8 cut(s) | 445, 581, 609, 1582, 1858, 2163, 3125, 3402 |
| MabI | ACCWGGT | 1 cut(s) | 3542 |
| MaeII | ACGT | 4 cut(s) | 66, 1021, 1584, 2647 |
| MaeIII | GTNAC | 6 cut(s) | 1003, 1577, 1919, 2518, 3149, 3371 |
| MfeI | CAATTG | 1 cut(s) | 213 |
| MflI | RGATCY | 5 cut(s) | 349, 1205, 1267, 1912, 2383 |
| MhlI | GDGCHC | 2 cut(s) | 3082, 3108 |
| MlsI | TGGCCA | 3 cut(s) | 473, 878, 1554 |
| MluNI | TGGCCA | 3 cut(s) | 473, 878, 1554 |
| MlyI | GAGTC | 4 cut(s) | 590, 1544, 2269, 3174 |
| MmeI | TCCRAC | 5 cut(s) | 580, 1082, 2873, 2934, 3389 |
| Mox20I | TGGCCA | 3 cut(s) | 473, 878, 1554 |
| Mph1103I | ATGCAT | 2 cut(s) | 308, 1494 |
| MroNI | GCCGGC | 1 cut(s) | 2918 |
| MroXI | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| MscI | TGGCCA | 3 cut(s) | 473, 878, 1554 |
| MslI | CAYNNNNRTG | 3 cut(s) | 120, 1958, 3517 |
| Msp20I | TGGCCA | 3 cut(s) | 473, 878, 1554 |
| MspI | CCGG | 5 cut(s) | 82, 963, 2254, 2901, 2919 |
| MspR9I | CCNGG | 6 cut(s) | 83, 1551, 2088, 2715, 2835, 3544 |
| MunI | CAATTG | 1 cut(s) | 213 |
| Mva1269I | GAATGC | 1 cut(s) | 308 |
| MvaI | CCWGG | 5 cut(s) | 1551, 2088, 2715, 2835, 3544 |
| MvnI | CGCG | 1 cut(s) | 250 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1413, 2437, 2879, 3048 |
| NaeI | GCCGGC | 1 cut(s) | 2920 |
| NciI | CCSGG | 1 cut(s) | 83 |
| NdeI | CATATG | 1 cut(s) | 1640 |
| NgoMIV | GCCGGC | 1 cut(s) | 2918 |
| NlaIV | GGNNCC | 6 cut(s) | 351, 1548, 2676, 2766, 3355, 3427 |
| NmeAIII | GCCGAG | 1 cut(s) | 412 |
| NmuCI | GTSAC | 4 cut(s) | 1577, 2518, 3149, 3371 |
| NruI | TCGCGA | 1 cut(s) | 250 |
| NsiI | ATGCAT | 2 cut(s) | 308, 1494 |
| NspI | RCATGY | 5 cut(s) | 1359, 2215, 3030, 3051, 3567 |
| NspV | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| PaeI | GCATGC | 3 cut(s) | 2215, 3051, 3567 |
| PceI | AGGCCT | 2 cut(s) | 392, 1179 |
| PciI | ACATGT | 1 cut(s) | 3026 |
| PciSI | GCTCTTC | 1 cut(s) | 1092 |
| PctI | GAATGC | 1 cut(s) | 308 |
| PdiI | GCCGGC | 1 cut(s) | 2920 |
| PdmI | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| PfeI | GAWTC | 9 cut(s) | 144, 491, 608, 1198, 1501, 1672, 1760, 2105, 3130 |
| PfoI | TCCNGGA | 1 cut(s) | 2713 |
| PkrI | GCNGC | 2 cut(s) | 2135, 2321 |
| PleI | GAGTC | 4 cut(s) | 589, 1543, 2268, 3174 |
| PpsI | GAGTC | 4 cut(s) | 589, 1543, 2268, 3174 |
| PscI | ACATGT | 1 cut(s) | 3026 |
| Psp124BI | GAGCTC | 1 cut(s) | 3108 |
| Psp6I | CCWGG | 5 cut(s) | 1549, 2086, 2713, 2833, 3542 |
| PspGI | CCWGG | 5 cut(s) | 1549, 2086, 2713, 2833, 3542 |
| PspN4I | GGNNCC | 6 cut(s) | 351, 1548, 2676, 2766, 3355, 3427 |
| PspPI | GGNCC | 2 cut(s) | 112, 1742 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 3372, 3404, 3471, 3503 |
| PstI | CTGCAG | 1 cut(s) | 135 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2319 |
| PsuI | RGATCY | 5 cut(s) | 349, 1205, 1267, 1912, 2383 |
| RruI | TCGCGA | 1 cut(s) | 250 |
| RseI | CAYNNNNRTG | 3 cut(s) | 120, 1958, 3517 |
| SacI | GAGCTC | 1 cut(s) | 3108 |
| SapI | GCTCTTC | 1 cut(s) | 1092 |
| SatI | GCNGC | 2 cut(s) | 2134, 2320 |
| Sau96I | GGNCC | 2 cut(s) | 112, 1742 |
| ScaI | AGTACT | 1 cut(s) | 1889 |
| SchI | GAGTC | 4 cut(s) | 590, 1544, 2269, 3174 |
| ScrFI | CCNGG | 6 cut(s) | 83, 1551, 2088, 2715, 2835, 3544 |
| SduI | GDGCHC | 2 cut(s) | 3082, 3108 |
| SexAI | ACCWGGT | 1 cut(s) | 3542 |
| SfaNI | GCATC | 8 cut(s) | 445, 581, 609, 1582, 1858, 2163, 3125, 3402 |
| SfcI | CTRYAG | 3 cut(s) | 131, 2611, 2657 |
| SfuI | TTCGAA | 3 cut(s) | 50, 197, 2155 |
| SinI | GGWCC | 1 cut(s) | 112 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 120, 1958, 3517 |
| SmlI | CTYRAG | 4 cut(s) | 1364, 1933, 1970, 1985 |
| SmoI | CTYRAG | 4 cut(s) | 1364, 1933, 1970, 1985 |
| SpeI | ACTAGT | 2 cut(s) | 1027, 3245 |
| SphI | GCATGC | 3 cut(s) | 2215, 3051, 3567 |
| SseBI | AGGCCT | 2 cut(s) | 392, 1179 |
| SsiI | CCGC | 3 cut(s) | 97, 2523, 2916 |
| SstI | GAGCTC | 1 cut(s) | 3108 |
| StuI | AGGCCT | 2 cut(s) | 392, 1179 |
| StyD4I | CCNGG | 6 cut(s) | 81, 1549, 2086, 2713, 2833, 3542 |
| StyI | CCWWGG | 2 cut(s) | 495, 2842 |
| TaaI | ACNGT | 6 cut(s) | 222, 469, 794, 1149, 1481, 2534 |
| TaiI | ACGT | 4 cut(s) | 69, 1024, 1587, 2650 |
| TaqI | TCGA | 9 cut(s) | 50, 197, 1228, 2145, 2155, 2475, 2582, 3108, 3133 |
| TaqII | GACCGA | 1 cut(s) | 3291 |
| TatI | WGTACW | 7 cut(s) | 556, 1594, 1887, 1994, 3084, 3299, 3388 |
| TfiI | GAWTC | 9 cut(s) | 144, 491, 608, 1198, 1501, 1672, 1760, 2105, 3130 |
| TscAI | CASTG | 5 cut(s) | 140, 474, 797, 1830, 2320 |
| TseFI | GTSAC | 4 cut(s) | 1577, 2518, 3149, 3371 |
| TseI | GCWGC | 2 cut(s) | 2133, 2319 |
| Tsp45I | GTSAC | 4 cut(s) | 1577, 2518, 3149, 3371 |
| TspDTI | ATGAA | 9 cut(s) | 420, 525, 791, 1580, 2003, 3143, 3188, 3279, 3390 |
| TspGWI | ACGGA | 4 cut(s) | 125, 1517, 1782, 2117 |
| TspRI | CASTG | 5 cut(s) | 140, 474, 797, 1830, 2320 |
| VpaK11BI | GGWCC | 1 cut(s) | 112 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1131 |
| XceI | RCATGY | 5 cut(s) | 1359, 2215, 3030, 3051, 3567 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 274, 2084 |
| XmiI | GTMKAC | 1 cut(s) | 1024 |
| XmnI | GAANNNNTTC | 3 cut(s) | 607, 1086, 1752 |
| ZrmI | AGTACT | 1 cut(s) | 1889 |
| Zsp2I | ATGCAT | 2 cut(s) | 308, 1494 |