TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 40 - 174 | 2.2e-20 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 345 |
| AccB1I | GGYRCC | 1 cut(s) | 384 |
| AclWI | GGATC | 1 cut(s) | 369 |
| AcsI | RAATTY | 3 cut(s) | 129, 440, 452 |
| AcuI | CTGAAG | 1 cut(s) | 77 |
| AfaI | GTAC | 4 cut(s) | 28, 84, 143, 325 |
| AgsI | TTSAA | 5 cut(s) | 65, 292, 440, 457, 539 |
| AjnI | CCWGG | 3 cut(s) | 118, 187, 460 |
| AluBI | AGCT | 3 cut(s) | 18, 181, 526 |
| AluI | AGCT | 3 cut(s) | 18, 181, 526 |
| Alw21I | GWGCWC | 1 cut(s) | 287 |
| Alw26I | GTCTC | 1 cut(s) | 161 |
| AlwI | GGATC | 1 cut(s) | 369 |
| Ama87I | CYCGRG | 1 cut(s) | 158 |
| ApeKI | GCWGC | 1 cut(s) | 181 |
| ApoI | RAATTY | 3 cut(s) | 129, 440, 452 |
| AspS9I | GGNCC | 1 cut(s) | 493 |
| AsuHPI | GGTGA | 2 cut(s) | 140, 211 |
| AvaI | CYCGRG | 1 cut(s) | 158 |
| AvaII | GGWCC | 1 cut(s) | 493 |
| BaeGI | GKGCMC | 1 cut(s) | 387 |
| BanI | GGYRCC | 1 cut(s) | 384 |
| Bbv12I | GWGCWC | 1 cut(s) | 287 |
| BbvI | GCAGC | 1 cut(s) | 168 |
| BccI | CCATC | 1 cut(s) | 205 |
| BciT130I | CCWGG | 3 cut(s) | 120, 189, 462 |
| BcoDI | GTCTC | 1 cut(s) | 161 |
| BfmI | CTRYAG | 1 cut(s) | 174 |
| BisI | GCNGC | 1 cut(s) | 182 |
| BlsI | GCNGC | 1 cut(s) | 183 |
| Bme1390I | CCNGG | 3 cut(s) | 120, 189, 462 |
| Bme18I | GGWCC | 1 cut(s) | 493 |
| BmeT110I | CYCGRG | 1 cut(s) | 158 |
| BmgT120I | GGNCC | 1 cut(s) | 493 |
| BmiI | GGNNCC | 2 cut(s) | 386, 494 |
| BmrFI | CCNGG | 3 cut(s) | 120, 189, 462 |
| BmsI | GCATC | 2 cut(s) | 193, 442 |
| BpmI | CTGGAG | 1 cut(s) | 141 |
| BpuEI | CTTGAG | 1 cut(s) | 431 |
| BsaBI | GATNNNNATC | 1 cut(s) | 426 |
| BsaJI | CCNNGG | 2 cut(s) | 460, 461 |
| Bse1I | ACTGG | 1 cut(s) | 353 |
| Bse3DI | GCAATG | 1 cut(s) | 38 |
| Bse8I | GATNNNNATC | 1 cut(s) | 426 |
| BseBI | CCWGG | 3 cut(s) | 120, 189, 462 |
| BseDI | CCNNGG | 2 cut(s) | 460, 461 |
| BseGI | GGATG | 2 cut(s) | 184, 216 |
| BseJI | GATNNNNATC | 1 cut(s) | 426 |
| BseMI | GCAATG | 1 cut(s) | 38 |
| BseNI | ACTGG | 1 cut(s) | 353 |
| BseRI | GAGGAG | 2 cut(s) | 233, 536 |
| BseSI | GKGCMC | 1 cut(s) | 387 |
| BseXI | GCAGC | 1 cut(s) | 168 |
| BshNI | GGYRCC | 1 cut(s) | 384 |
| BsiHKAI | GWGCWC | 1 cut(s) | 287 |
| BsiHKCI | CYCGRG | 1 cut(s) | 158 |
| BsiWI | CGTACG | 1 cut(s) | 82 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BsmAI | GTCTC | 1 cut(s) | 161 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsoBI | CYCGRG | 1 cut(s) | 158 |
| Bsp1286I | GDGCHC | 2 cut(s) | 287, 387 |
| Bsp143I | GATC | 1 cut(s) | 361 |
| BspLI | GGNNCC | 2 cut(s) | 386, 494 |
| BspPI | GGATC | 1 cut(s) | 369 |
| BspT107I | GGYRCC | 1 cut(s) | 384 |
| BsrDI | GCAATG | 1 cut(s) | 38 |
| BsrI | ACTGG | 1 cut(s) | 353 |
| BssECI | CCNNGG | 2 cut(s) | 460, 461 |
| BssMI | GATC | 1 cut(s) | 361 |
| Bst2UI | CCWGG | 3 cut(s) | 120, 189, 462 |
| Bst4CI | ACNGT | 2 cut(s) | 342, 389 |
| BstDEI | CTNAG | 1 cut(s) | 552 |
| BstF5I | GGATG | 2 cut(s) | 184, 216 |
| BstKTI | GATC | 1 cut(s) | 364 |
| BstMAI | GTCTC | 1 cut(s) | 161 |
| BstMBI | GATC | 1 cut(s) | 361 |
| BstNI | CCWGG | 3 cut(s) | 120, 189, 462 |
| BstNSI | RCATGY | 1 cut(s) | 536 |
| BstSCI | CCNGG | 3 cut(s) | 118, 187, 460 |
| BstSFI | CTRYAG | 1 cut(s) | 174 |
| BstSLI | GKGCMC | 1 cut(s) | 387 |
| BstV1I | GCAGC | 1 cut(s) | 168 |
| BtsCI | GGATG | 2 cut(s) | 184, 216 |
| BtsIMutI | CAGTG | 3 cut(s) | 275, 347, 360 |
| Cfr13I | GGNCC | 1 cut(s) | 493 |
| Csp6I | GTAC | 4 cut(s) | 27, 83, 142, 324 |
| CviAII | CATG | 2 cut(s) | 92, 533 |
| CviJI | RGCY | 4 cut(s) | 18, 32, 181, 526 |
| CviKI_1 | RGCY | 4 cut(s) | 18, 32, 181, 526 |
| CviQI | GTAC | 4 cut(s) | 27, 83, 142, 324 |
| DdeI | CTNAG | 1 cut(s) | 552 |
| DpnI | GATC | 1 cut(s) | 363 |
| DpnII | GATC | 1 cut(s) | 361 |
| DraI | TTTAAA | 1 cut(s) | 451 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 345 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 345 |
| Eco32I | GATATC | 1 cut(s) | 424 |
| Eco47I | GGWCC | 1 cut(s) | 493 |
| Eco57I | CTGAAG | 1 cut(s) | 77 |
| Eco88I | CYCGRG | 1 cut(s) | 158 |
| EcoRI | GAATTC | 1 cut(s) | 440 |
| EcoRII | CCWGG | 3 cut(s) | 118, 187, 460 |
| EcoRV | GATATC | 1 cut(s) | 424 |
| FaeI | CATG | 2 cut(s) | 95, 536 |
| FaiI | YATR | 9 cut(s) | 21, 93, 176, 312, 401, 500, 505, 507, 534 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FatI | CATG | 2 cut(s) | 91, 532 |
| Fnu4HI | GCNGC | 1 cut(s) | 182 |
| FokI | GGATG | 2 cut(s) | 171, 223 |
| Fsp4HI | GCNGC | 1 cut(s) | 182 |
| GluI | GCNGC | 1 cut(s) | 182 |
| GsuI | CTGGAG | 1 cut(s) | 141 |
| Hin1II | CATG | 2 cut(s) | 95, 536 |
| HincII | GTYRAC | 1 cut(s) | 350 |
| HindII | GTYRAC | 1 cut(s) | 350 |
| HinfI | GANTC | 2 cut(s) | 216, 240 |
| HphI | GGTGA | 2 cut(s) | 140, 211 |
| Hpy166II | GTNNAC | 2 cut(s) | 198, 350 |
| Hpy188III | TCNNGA | 1 cut(s) | 437 |
| Hpy8I | GTNNAC | 2 cut(s) | 198, 350 |
| HpyAV | CCTTC | 2 cut(s) | 232, 533 |
| HpyCH4III | ACNGT | 2 cut(s) | 342, 389 |
| HpyCH4IV | ACGT | 1 cut(s) | 85 |
| HpyCH4V | TGCA | 1 cut(s) | 184 |
| HpyF3I | CTNAG | 1 cut(s) | 552 |
| HpySE526I | ACGT | 1 cut(s) | 85 |
| Hsp92II | CATG | 2 cut(s) | 95, 536 |
| Kzo9I | GATC | 1 cut(s) | 361 |
| LmnI | GCTCC | 2 cut(s) | 121, 523 |
| LpnPI | CCDG | 9 cut(s) | 68, 105, 132, 174, 201, 366, 404, 447, 474 |
| Lsp1109I | GCAGC | 1 cut(s) | 168 |
| LweI | GCATC | 2 cut(s) | 193, 442 |
| MaeII | ACGT | 1 cut(s) | 85 |
| MalI | GATC | 1 cut(s) | 363 |
| MboI | GATC | 1 cut(s) | 361 |
| MboII | GAAGA | 4 cut(s) | 69, 367, 493, 524 |
| MhlI | GDGCHC | 2 cut(s) | 287, 387 |
| MluCI | AATT | 5 cut(s) | 100, 129, 276, 440, 452 |
| MlyI | GAGTC | 1 cut(s) | 234 |
| MmeI | TCCRAC | 2 cut(s) | 321, 339 |
| MnlI | CCTC | 3 cut(s) | 254, 502, 514 |
| MseI | TTAA | 3 cut(s) | 105, 279, 450 |
| MspR9I | CCNGG | 3 cut(s) | 120, 189, 462 |
| MvaI | CCWGG | 3 cut(s) | 120, 189, 462 |
| NdeII | GATC | 1 cut(s) | 361 |
| NlaIII | CATG | 2 cut(s) | 95, 536 |
| NlaIV | GGNNCC | 2 cut(s) | 386, 494 |
| NspI | RCATGY | 1 cut(s) | 536 |
| PasI | CCCWGGG | 1 cut(s) | 461 |
| PfeI | GAWTC | 1 cut(s) | 216 |
| Pfl23II | CGTACG | 1 cut(s) | 82 |
| PfoI | TCCNGGA | 1 cut(s) | 118 |
| PkrI | GCNGC | 1 cut(s) | 183 |
| PleI | GAGTC | 1 cut(s) | 234 |
| PpsI | GAGTC | 1 cut(s) | 234 |
| Psp6I | CCWGG | 3 cut(s) | 118, 187, 460 |
| PspGI | CCWGG | 3 cut(s) | 118, 187, 460 |
| PspLI | CGTACG | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 2 cut(s) | 386, 494 |
| PspPI | GGNCC | 1 cut(s) | 493 |
| RsaI | GTAC | 4 cut(s) | 28, 84, 143, 325 |
| RsaNI | GTAC | 4 cut(s) | 27, 83, 142, 324 |
| SaqAI | TTAA | 3 cut(s) | 105, 279, 450 |
| SatI | GCNGC | 1 cut(s) | 182 |
| Sau3AI | GATC | 1 cut(s) | 361 |
| Sau96I | GGNCC | 1 cut(s) | 493 |
| SchI | GAGTC | 1 cut(s) | 234 |
| ScrFI | CCNGG | 3 cut(s) | 120, 189, 462 |
| SduI | GDGCHC | 2 cut(s) | 287, 387 |
| SetI | ASST | 8 cut(s) | 20, 57, 88, 183, 193, 224, 262, 528 |
| SfaNI | GCATC | 2 cut(s) | 193, 442 |
| SfcI | CTRYAG | 1 cut(s) | 174 |
| SinI | GGWCC | 1 cut(s) | 493 |
| SmiI | ATTTAAAT | 1 cut(s) | 451 |
| SmlI | CTYRAG | 1 cut(s) | 410 |
| SmoI | CTYRAG | 1 cut(s) | 410 |
| Sse9I | AATT | 5 cut(s) | 100, 129, 276, 440, 452 |
| StyD4I | CCNGG | 3 cut(s) | 118, 187, 460 |
| SwaI | ATTTAAAT | 1 cut(s) | 451 |
| TaaI | ACNGT | 2 cut(s) | 342, 389 |
| TaiI | ACGT | 1 cut(s) | 88 |
| TaqI | TCGA | 1 cut(s) | 406 |
| TasI | AATT | 5 cut(s) | 100, 129, 276, 440, 452 |
| TatI | WGTACW | 1 cut(s) | 26 |
| TfiI | GAWTC | 1 cut(s) | 216 |
| Tru1I | TTAA | 3 cut(s) | 105, 279, 450 |
| Tru9I | TTAA | 3 cut(s) | 105, 279, 450 |
| TscAI | CASTG | 3 cut(s) | 275, 347, 360 |
| TseI | GCWGC | 1 cut(s) | 181 |
| TspDTI | ATGAA | 4 cut(s) | 27, 27, 80, 141 |
| TspGWI | ACGGA | 3 cut(s) | 70, 315, 485 |
| TspRI | CASTG | 3 cut(s) | 275, 347, 360 |
| VpaK11BI | GGWCC | 1 cut(s) | 493 |
| XapI | RAATTY | 3 cut(s) | 129, 440, 452 |
| XceI | RCATGY | 1 cut(s) | 536 |