TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 192 | 3.3e-51 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 7.3e-14 | TIR domain |
| NB-ARC | PF00931 | 212 - 365 | 2.8e-19 | NB-ARC domain |
| NACHT | PF05729 | 219 - 364 | 7.8e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 435 - 503 | 3.1e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 577 - 683 | 8.7e-14 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 672 - 730 | 3.6e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 757 - 832 | 1.8e-08 | Leucine-rich repeat region |
| LRR_4 | PF12799 | 768 - 803 | 1e-05 | Leucine Rich repeats (2 copies) |
| LRR_8 | PF13855 | 768 - 823 | 7.6e-08 | Leucine rich repeat |
| C-JID | PF20160 | 906 - 985 | 3.9e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 863, 1142 |
| AatII | GACGTC | 2 cut(s) | 642, 1560 |
| AccBSI | CCGCTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 1 cut(s) | 778 |
| AccII | CGCG | 1 cut(s) | 2198 |
| AciI | CCGC | 6 cut(s) | 643, 669, 698, 1501, 2196, 2469 |
| AclWI | GGATC | 5 cut(s) | 338, 1212, 1299, 1422, 2325 |
| AcoI | YGGCCR | 1 cut(s) | 2547 |
| AcsI | RAATTY | 7 cut(s) | 53, 481, 585, 722, 1088, 1260, 2726 |
| AcuI | CTGAAG | 2 cut(s) | 1052, 1128 |
| AcyI | GRCGYC | 2 cut(s) | 639, 1557 |
| AfaI | GTAC | 8 cut(s) | 357, 817, 1179, 1693, 1794, 2007, 2741, 2996 |
| AfeI | AGCGCT | 1 cut(s) | 2518 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 2755, 2864, 2918, 2990, 2991 |
| AflII | CTTAAG | 2 cut(s) | 2512, 2663 |
| AflIII | ACRYGT | 1 cut(s) | 1564 |
| AhlI | ACTAGT | 1 cut(s) | 280 |
| AjnI | CCWGG | 3 cut(s) | 1714, 2785, 3050 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 564, 596, 1104, 1136 |
| AleI | CACNNNNGTG | 1 cut(s) | 2751 |
| Alw21I | GWGCWC | 1 cut(s) | 1228 |
| Alw26I | GTCTC | 2 cut(s) | 1995, 2027 |
| Alw44I | GTGCAC | 1 cut(s) | 1224 |
| AlwI | GGATC | 5 cut(s) | 338, 1212, 1299, 1422, 2325 |
| Ama87I | CYCGRG | 2 cut(s) | 2417, 2917 |
| Aor51HI | AGCGCT | 1 cut(s) | 2518 |
| AoxI | GGCC | 4 cut(s) | 825, 1726, 2547, 2892 |
| ApaLI | GTGCAC | 1 cut(s) | 1224 |
| ApeKI | GCWGC | 2 cut(s) | 203, 601 |
| ApoI | RAATTY | 7 cut(s) | 53, 481, 585, 722, 1088, 1260, 2726 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2239, 2271 |
| AseI | ATTAAT | 1 cut(s) | 1608 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 1950 |
| AspLEI | GCGC | 1 cut(s) | 2519 |
| AspS9I | GGNCC | 2 cut(s) | 2871, 2892 |
| AsuC2I | CCSGG | 3 cut(s) | 2718, 2918, 2919 |
| AsuHPI | GGTGA | 3 cut(s) | 890, 2193, 2738 |
| AvaI | CYCGRG | 2 cut(s) | 2417, 2917 |
| AvaII | GGWCC | 1 cut(s) | 2871 |
| BaeGI | GKGCMC | 2 cut(s) | 1228, 2985 |
| BalI | TGGCCA | 1 cut(s) | 2549 |
| BauI | CACGAG | 1 cut(s) | 1985 |
| BbsI | GAAGAC | 4 cut(s) | 1151, 1459, 1560, 2361 |
| Bbv12I | GWGCWC | 1 cut(s) | 1228 |
| BbvI | GCAGC | 2 cut(s) | 190, 613 |
| BccI | CCATC | 3 cut(s) | 924, 1442, 2984 |
| BceAI | ACGGC | 1 cut(s) | 1918 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1376, 1410, 1966, 2000, 2256, 2290 |
| BciT130I | CCWGG | 3 cut(s) | 1716, 2787, 3052 |
| BcnI | CCSGG | 3 cut(s) | 2718, 2918, 2919 |
| BcoDI | GTCTC | 2 cut(s) | 1995, 2027 |
| BcuI | ACTAGT | 1 cut(s) | 280 |
| BfaI | CTAG | 9 cut(s) | 281, 578, 990, 1295, 1322, 1682, 2384, 2439, 2732 |
| BfmI | CTRYAG | 2 cut(s) | 2772, 3037 |
| BfoI | RGCGCY | 1 cut(s) | 2520 |
| BfrI | CTTAAG | 2 cut(s) | 2512, 2663 |
| BglII | AGATCT | 4 cut(s) | 1297, 1981, 2029, 2386 |
| BisI | GCNGC | 4 cut(s) | 204, 602, 2196, 2470 |
| BlsI | GCNGC | 4 cut(s) | 205, 603, 2197, 2471 |
| BmcAI | AGTACT | 1 cut(s) | 1179 |
| Bme1390I | CCNGG | 6 cut(s) | 1716, 2718, 2787, 2918, 2919, 3052 |
| Bme18I | GGWCC | 1 cut(s) | 2871 |
| BmeT110I | CYCGRG | 2 cut(s) | 2417, 2917 |
| BmgT120I | GGNCC | 2 cut(s) | 2871, 2892 |
| BmiI | GGNNCC | 1 cut(s) | 853 |
| BmrFI | CCNGG | 6 cut(s) | 1716, 2718, 2787, 2918, 2919, 3052 |
| BmrI | ACTGGG | 3 cut(s) | 1190, 1247, 2343 |
| BmsI | GCATC | 9 cut(s) | 312, 1045, 1452, 1823, 2351, 2433, 2648, 2791, 3056 |
| BmuI | ACTGGG | 3 cut(s) | 1190, 1247, 2343 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1866 |
| BpiI | GAAGAC | 4 cut(s) | 1151, 1459, 1560, 2361 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 698, 730, 879, 911, 2483, 2515 |
| BpuEI | CTTGAG | 3 cut(s) | 577, 1688, 2474 |
| BpuMI | CCSGG | 3 cut(s) | 2718, 2918, 2919 |
| BsaAI | YACGTR | 2 cut(s) | 1796, 2009 |
| BsaBI | GATNNNNATC | 4 cut(s) | 236, 342, 1296, 2034 |
| BsaHI | GRCGYC | 2 cut(s) | 639, 1557 |
| BsaJI | CCNNGG | 2 cut(s) | 1714, 2917 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 2755, 2864, 2918, 2990, 2991 |
| Bse1I | ACTGG | 7 cut(s) | 605, 1185, 1242, 1380, 1912, 2319, 2349 |
| Bse3DI | GCAATG | 2 cut(s) | 1326, 2645 |
| Bse8I | GATNNNNATC | 4 cut(s) | 236, 342, 1296, 2034 |
| BseBI | CCWGG | 3 cut(s) | 1716, 2787, 3052 |
| BseDI | CCNNGG | 2 cut(s) | 1714, 2917 |
| BseJI | GATNNNNATC | 4 cut(s) | 236, 342, 1296, 2034 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 2755, 2864, 2918, 2990, 2991 |
| BseMI | GCAATG | 2 cut(s) | 1326, 2645 |
| BseMII | CTCAG | 7 cut(s) | 59, 59, 1220, 1489, 2404, 2879, 3000 |
| BseNI | ACTGG | 7 cut(s) | 605, 1185, 1242, 1380, 1912, 2319, 2349 |
| BseRI | GAGGAG | 3 cut(s) | 33, 1901, 2831 |
| BseSI | GKGCMC | 2 cut(s) | 1228, 2985 |
| BseXI | GCAGC | 2 cut(s) | 190, 613 |
| BseYI | CCCAGC | 3 cut(s) | 190, 473, 1522 |
| BsgI | GTGCAG | 1 cut(s) | 452 |
| Bsh1236I | CGCG | 1 cut(s) | 2198 |
| BshFI | GGCC | 4 cut(s) | 827, 1728, 2549, 2894 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1228 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2417, 2917 |
| BsiSI | CCGG | 5 cut(s) | 1081, 2069, 2264, 2718, 2918 |
| BslFI | GGGAC | 1 cut(s) | 2574 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 2755, 2864, 2918, 2990, 2991 |
| BsmAI | GTCTC | 2 cut(s) | 1995, 2027 |
| BsmFI | GGGAC | 1 cut(s) | 2574 |
| BsmI | GAATGC | 3 cut(s) | 302, 1944, 2299 |
| BsnI | GGCC | 4 cut(s) | 827, 1728, 2549, 2894 |
| BsoBI | CYCGRG | 2 cut(s) | 2417, 2917 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1228, 2985 |
| Bsp1407I | TGTACA | 2 cut(s) | 815, 1691 |
| BspACI | CCGC | 6 cut(s) | 643, 669, 698, 1501, 2196, 2469 |
| BspANI | GGCC | 4 cut(s) | 827, 1728, 2549, 2894 |
| BspCNI | CTCAG | 7 cut(s) | 58, 60, 1221, 1488, 2403, 2880, 3001 |
| BspFNI | CGCG | 1 cut(s) | 2198 |
| BspHI | TCATGA | 2 cut(s) | 397, 844 |
| BspLI | GGNNCC | 1 cut(s) | 853 |
| BspPI | GGATC | 5 cut(s) | 338, 1212, 1299, 1422, 2325 |
| BspTI | CTTAAG | 2 cut(s) | 2512, 2663 |
| BsrBI | CCGCTC | 1 cut(s) | 698 |
| BsrDI | GCAATG | 2 cut(s) | 1326, 2645 |
| BsrGI | TGTACA | 2 cut(s) | 815, 1691 |
| BsrI | ACTGG | 7 cut(s) | 605, 1185, 1242, 1380, 1912, 2319, 2349 |
| BssECI | CCNNGG | 2 cut(s) | 1714, 2917 |
| BssNI | GRCGYC | 2 cut(s) | 639, 1557 |
| BssSI | CACGAG | 1 cut(s) | 1985 |
| Bst2BI | CACGAG | 1 cut(s) | 1985 |
| Bst2UI | CCWGG | 3 cut(s) | 1716, 2787, 3052 |
| Bst4CI | ACNGT | 6 cut(s) | 319, 1223, 1701, 2600, 2773, 3038 |
| Bst6I | CTCTTC | 4 cut(s) | 1071, 1237, 1299, 1998 |
| BstACI | GRCGYC | 2 cut(s) | 639, 1557 |
| BstAFI | CTTAAG | 2 cut(s) | 2512, 2663 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1471 |
| BstAUI | TGTACA | 2 cut(s) | 815, 1691 |
| BstBAI | YACGTR | 2 cut(s) | 1796, 2009 |
| BstC8I | GCNNGC | 2 cut(s) | 1786, 3018 |
| BstFNI | CGCG | 1 cut(s) | 2198 |
| BstH2I | RGCGCY | 1 cut(s) | 2520 |
| BstHHI | GCGC | 1 cut(s) | 2519 |
| BstMAI | GTCTC | 2 cut(s) | 1995, 2027 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 78, 200, 470, 1471 |
| BstNI | CCWGG | 3 cut(s) | 1716, 2787, 3052 |
| BstNSI | RCATGY | 2 cut(s) | 1335, 1568 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1866 |
| BstSCI | CCNGG | 6 cut(s) | 1714, 2716, 2785, 2916, 2917, 3050 |
| BstSFI | CTRYAG | 2 cut(s) | 2772, 3037 |
| BstSLI | GKGCMC | 2 cut(s) | 1228, 2985 |
| BstUI | CGCG | 1 cut(s) | 2198 |
| BstV1I | GCAGC | 2 cut(s) | 190, 613 |
| BstV2I | GAAGAC | 4 cut(s) | 1151, 1459, 1560, 2361 |
| BstX2I | RGATCY | 8 cut(s) | 1204, 1291, 1297, 1427, 1981, 2029, 2317, 2386 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2557 |
| BstYI | RGATCY | 8 cut(s) | 1204, 1291, 1297, 1427, 1981, 2029, 2317, 2386 |
| BsuRI | GGCC | 4 cut(s) | 827, 1728, 2549, 2894 |
| BtgZI | GCGATG | 1 cut(s) | 96 |
| BtsI | GCAGTG | 2 cut(s) | 117, 1795 |
| BtsIMutI | CAGTG | 7 cut(s) | 53, 117, 1226, 1228, 1795, 1905, 2356 |
| Cac8I | GCNNGC | 2 cut(s) | 1786, 3018 |
| CciI | TCATGA | 2 cut(s) | 397, 844 |
| CfoI | GCGC | 1 cut(s) | 2519 |
| Cfr13I | GGNCC | 2 cut(s) | 2871, 2892 |
| Cfr9I | CCCGGG | 1 cut(s) | 2917 |
| CseI | GACGC | 1 cut(s) | 2187 |
| Csp6I | GTAC | 8 cut(s) | 356, 816, 1178, 1692, 1793, 2006, 2740, 2995 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2842, 2877 |
| CviQI | GTAC | 8 cut(s) | 356, 816, 1178, 1692, 1793, 2006, 2740, 2995 |
| DraI | TTTAAA | 3 cut(s) | 379, 1651, 2605 |
| EaeI | YGGCCR | 1 cut(s) | 2547 |
| Eam1104I | CTCTTC | 4 cut(s) | 1071, 1237, 1299, 1998 |
| EarI | CTCTTC | 4 cut(s) | 1071, 1237, 1299, 1998 |
| Eco147I | AGGCCT | 1 cut(s) | 1728 |
| Eco47I | GGWCC | 1 cut(s) | 2871 |
| Eco47III | AGCGCT | 1 cut(s) | 2518 |
| Eco57I | CTGAAG | 2 cut(s) | 1052, 1128 |
| Eco88I | CYCGRG | 2 cut(s) | 2417, 2917 |
| EcoRI | GAATTC | 2 cut(s) | 481, 1088 |
| EcoRII | CCWGG | 3 cut(s) | 1714, 2785, 3050 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 302, 1467 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1104, 1136 |
| FaqI | GGGAC | 1 cut(s) | 2574 |
| FauI | CCCGC | 1 cut(s) | 662 |
| FauNDI | CATATG | 1 cut(s) | 2694 |
| FblI | GTMKAC | 1 cut(s) | 778 |
| Fnu4HI | GCNGC | 4 cut(s) | 204, 602, 2196, 2470 |
| Fsp4HI | GCNGC | 4 cut(s) | 204, 602, 2196, 2470 |
| FspBI | CTAG | 9 cut(s) | 281, 578, 990, 1295, 1322, 1682, 2384, 2439, 2732 |
| GlaI | GCGC | 1 cut(s) | 2518 |
| GluI | GCNGC | 4 cut(s) | 204, 602, 2196, 2470 |
| GsaI | CCCAGC | 3 cut(s) | 194, 477, 1526 |
| HaeII | RGCGCY | 1 cut(s) | 2520 |
| HaeIII | GGCC | 4 cut(s) | 827, 1728, 2549, 2894 |
| HapII | CCGG | 5 cut(s) | 1081, 2069, 2264, 2718, 2918 |
| HgaI | GACGC | 1 cut(s) | 2187 |
| HhaI | GCGC | 1 cut(s) | 2519 |
| Hin1I | GRCGYC | 2 cut(s) | 639, 1557 |
| Hin6I | GCGC | 1 cut(s) | 2517 |
| HinP1I | GCGC | 1 cut(s) | 2517 |
| HincII | GTYRAC | 5 cut(s) | 261, 1636, 1711, 2596, 2948 |
| HindII | GTYRAC | 5 cut(s) | 261, 1636, 1711, 2596, 2948 |
| HindIII | AAGCTT | 2 cut(s) | 1841, 2102 |
| HpaI | GTTAAC | 1 cut(s) | 2596 |
| HpaII | CCGG | 5 cut(s) | 1081, 2069, 2264, 2718, 2918 |
| HphI | GGTGA | 3 cut(s) | 890, 2193, 2738 |
| Hpy188I | TCNGA | 9 cut(s) | 69, 231, 352, 838, 1447, 1478, 2341, 2481, 2959 |
| HpyCH4III | ACNGT | 6 cut(s) | 319, 1223, 1701, 2600, 2773, 3038 |
| HpyCH4IV | ACGT | 4 cut(s) | 639, 1557, 1795, 2008 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 78, 200, 470, 1471 |
| HpySE526I | ACGT | 4 cut(s) | 639, 1557, 1795, 2008 |
| Hsp92I | GRCGYC | 2 cut(s) | 639, 1557 |
| HspAI | GCGC | 1 cut(s) | 2517 |
| KspAI | GTTAAC | 1 cut(s) | 2596 |
| LmnI | GCTCC | 3 cut(s) | 851, 1888, 2719 |
| Lsp1109I | GCAGC | 2 cut(s) | 190, 613 |
| LweI | GCATC | 9 cut(s) | 312, 1045, 1452, 1823, 2351, 2433, 2648, 2791, 3056 |
| MaeI | CTAG | 9 cut(s) | 281, 578, 990, 1295, 1322, 1682, 2384, 2439, 2732 |
| MaeII | ACGT | 4 cut(s) | 639, 1557, 1795, 2008 |
| MbiI | CCGCTC | 1 cut(s) | 698 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MflI | RGATCY | 8 cut(s) | 1204, 1291, 1297, 1427, 1981, 2029, 2317, 2386 |
| MhlI | GDGCHC | 2 cut(s) | 1228, 2985 |
| MlsI | TGGCCA | 1 cut(s) | 2549 |
| MluNI | TGGCCA | 1 cut(s) | 2549 |
| MlyI | GAGTC | 2 cut(s) | 1731, 2832 |
| MmeI | TCCRAC | 1 cut(s) | 562 |
| Mox20I | TGGCCA | 1 cut(s) | 2549 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 302, 1467 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 1950 |
| MscI | TGGCCA | 1 cut(s) | 2549 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2751 |
| Msp20I | TGGCCA | 1 cut(s) | 2549 |
| MspCI | CTTAAG | 2 cut(s) | 2512, 2663 |
| MspI | CCGG | 5 cut(s) | 1081, 2069, 2264, 2718, 2918 |
| MspR9I | CCNGG | 6 cut(s) | 1716, 2718, 2787, 2918, 2919, 3052 |
| MunI | CAATTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 3 cut(s) | 302, 1944, 2299 |
| MvaI | CCWGG | 3 cut(s) | 1716, 2787, 3052 |
| MvnI | CGCG | 1 cut(s) | 2198 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 78, 200, 470, 1471 |
| NciI | CCSGG | 3 cut(s) | 2718, 2918, 2919 |
| NdeI | CATATG | 1 cut(s) | 2694 |
| NlaIV | GGNNCC | 1 cut(s) | 853 |
| NmuCI | GTSAC | 5 cut(s) | 878, 1616, 2199, 2255, 2324 |
| NsiI | ATGCAT | 3 cut(s) | 256, 302, 1467 |
| NspI | RCATGY | 2 cut(s) | 1335, 1568 |
| OliI | CACNNNNGTG | 1 cut(s) | 2751 |
| PagI | TCATGA | 2 cut(s) | 397, 844 |
| PceI | AGGCCT | 1 cut(s) | 1728 |
| PciI | ACATGT | 1 cut(s) | 1564 |
| PctI | GAATGC | 3 cut(s) | 302, 1944, 2299 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 1950 |
| PfeI | GAWTC | 8 cut(s) | 15, 138, 500, 711, 1061, 1508, 1627, 1768 |
| PfoI | TCCNGGA | 1 cut(s) | 2716 |
| PkrI | GCNGC | 4 cut(s) | 205, 603, 2197, 2471 |
| PleI | GAGTC | 2 cut(s) | 1731, 2832 |
| PpsI | GAGTC | 2 cut(s) | 1731, 2832 |
| Ppu21I | YACGTR | 2 cut(s) | 1796, 2009 |
| PscI | ACATGT | 1 cut(s) | 1564 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1866 |
| PshBI | ATTAAT | 1 cut(s) | 1608 |
| PsiI | TTATAA | 2 cut(s) | 863, 1142 |
| Psp6I | CCWGG | 3 cut(s) | 1714, 2785, 3050 |
| PspFI | CCCAGC | 3 cut(s) | 190, 473, 1522 |
| PspGI | CCWGG | 3 cut(s) | 1714, 2785, 3050 |
| PspN4I | GGNNCC | 1 cut(s) | 853 |
| PspPI | GGNCC | 2 cut(s) | 2871, 2892 |
| PsuI | RGATCY | 8 cut(s) | 1204, 1291, 1297, 1427, 1981, 2029, 2317, 2386 |
| RsaI | GTAC | 8 cut(s) | 357, 817, 1179, 1693, 1794, 2007, 2741, 2996 |
| RsaNI | GTAC | 8 cut(s) | 356, 816, 1178, 1692, 1793, 2006, 2740, 2995 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2751 |
| SatI | GCNGC | 4 cut(s) | 204, 602, 2196, 2470 |
| Sau96I | GGNCC | 2 cut(s) | 2871, 2892 |
| ScaI | AGTACT | 1 cut(s) | 1179 |
| SchI | GAGTC | 2 cut(s) | 1731, 2832 |
| ScrFI | CCNGG | 6 cut(s) | 1716, 2718, 2787, 2918, 2919, 3052 |
| SduI | GDGCHC | 2 cut(s) | 1228, 2985 |
| SfaNI | GCATC | 9 cut(s) | 312, 1045, 1452, 1823, 2351, 2433, 2648, 2791, 3056 |
| SfcI | CTRYAG | 2 cut(s) | 2772, 3037 |
| SinI | GGWCC | 1 cut(s) | 2871 |
| SmaI | CCCGGG | 1 cut(s) | 2919 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2751 |
| SmlI | CTYRAG | 5 cut(s) | 592, 1667, 2453, 2512, 2663 |
| SmoI | CTYRAG | 5 cut(s) | 592, 1667, 2453, 2512, 2663 |
| SpeI | ACTAGT | 1 cut(s) | 280 |
| SseBI | AGGCCT | 1 cut(s) | 1728 |
| SsiI | CCGC | 6 cut(s) | 643, 669, 698, 1501, 2196, 2469 |
| SspI | AATATT | 4 cut(s) | 935, 1317, 1825, 2589 |
| SspMI | CTAG | 9 cut(s) | 281, 578, 990, 1295, 1322, 1682, 2384, 2439, 2732 |
| StuI | AGGCCT | 1 cut(s) | 1728 |
| StyD4I | CCNGG | 6 cut(s) | 1714, 2716, 2785, 2916, 2917, 3050 |
| TaaI | ACNGT | 6 cut(s) | 319, 1223, 1701, 2600, 2773, 3038 |
| TaiI | ACGT | 4 cut(s) | 642, 1560, 1798, 2011 |
| TaqI | TCGA | 4 cut(s) | 1173, 1360, 2765, 3030 |
| TatI | WGTACW | 3 cut(s) | 815, 1177, 1691 |
| TauI | GCSGC | 2 cut(s) | 2198, 2472 |
| TfiI | GAWTC | 8 cut(s) | 15, 138, 500, 711, 1061, 1508, 1627, 1768 |
| TscAI | CASTG | 7 cut(s) | 53, 124, 1228, 1233, 1795, 1912, 2356 |
| TseFI | GTSAC | 5 cut(s) | 878, 1616, 2199, 2255, 2324 |
| TseI | GCWGC | 2 cut(s) | 203, 601 |
| Tsp45I | GTSAC | 5 cut(s) | 878, 1616, 2199, 2255, 2324 |
| TspMI | CCCGGG | 1 cut(s) | 2917 |
| TspRI | CASTG | 7 cut(s) | 53, 124, 1228, 1233, 1795, 1912, 2356 |
| Vha464I | CTTAAG | 2 cut(s) | 2512, 2663 |
| VneI | GTGCAC | 1 cut(s) | 1224 |
| VpaK11BI | GGWCC | 1 cut(s) | 2871 |
| VspI | ATTAAT | 1 cut(s) | 1608 |
| XapI | RAATTY | 7 cut(s) | 53, 481, 585, 722, 1088, 1260, 2726 |
| XbaI | TCTAGA | 4 cut(s) | 1294, 1681, 2438, 2731 |
| XceI | RCATGY | 2 cut(s) | 1335, 1568 |
| XmaI | CCCGGG | 1 cut(s) | 2917 |
| XmiI | GTMKAC | 1 cut(s) | 778 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1316, 1950 |
| XspI | CTAG | 9 cut(s) | 281, 578, 990, 1295, 1322, 1682, 2384, 2439, 2732 |
| ZraI | GACGTC | 2 cut(s) | 640, 1558 |
| ZrmI | AGTACT | 1 cut(s) | 1179 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 302, 1467 |