TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 19 - 166 | 9.4e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 53 |
| AccIII | TCCGGA | 1 cut(s) | 330 |
| AcsI | RAATTY | 1 cut(s) | 69 |
| AdeI | CACNNNGTG | 1 cut(s) | 496 |
| AfaI | GTAC | 2 cut(s) | 123, 183 |
| AgsI | TTSAA | 4 cut(s) | 85, 284, 371, 424 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 196 |
| AjiI | CACGTC | 1 cut(s) | 496 |
| AjnI | CCWGG | 2 cut(s) | 58, 337 |
| AluBI | AGCT | 2 cut(s) | 437, 505 |
| AluI | AGCT | 2 cut(s) | 437, 505 |
| Alw21I | GWGCWC | 1 cut(s) | 175 |
| Aor13HI | TCCGGA | 1 cut(s) | 330 |
| AoxI | GGCC | 1 cut(s) | 471 |
| ApaI | GGGCCC | 1 cut(s) | 475 |
| ApeKI | GCWGC | 3 cut(s) | 534, 537, 605 |
| ApoI | RAATTY | 1 cut(s) | 69 |
| AspS9I | GGNCC | 3 cut(s) | 323, 471, 472 |
| AsuC2I | CCSGG | 1 cut(s) | 321 |
| AsuHPI | GGTGA | 1 cut(s) | 290 |
| AvaII | GGWCC | 1 cut(s) | 323 |
| BaeGI | GKGCMC | 1 cut(s) | 475 |
| BanII | GRGCYC | 1 cut(s) | 475 |
| Bbv12I | GWGCWC | 1 cut(s) | 175 |
| BbvI | GCAGC | 3 cut(s) | 546, 549, 617 |
| BceAI | ACGGC | 1 cut(s) | 188 |
| BciT130I | CCWGG | 2 cut(s) | 60, 339 |
| BclI | TGATCA | 1 cut(s) | 507 |
| BcnI | CCSGG | 1 cut(s) | 321 |
| BfmI | CTRYAG | 1 cut(s) | 648 |
| BisI | GCNGC | 3 cut(s) | 535, 538, 606 |
| BlsI | GCNGC | 3 cut(s) | 536, 539, 607 |
| Bme1390I | CCNGG | 3 cut(s) | 60, 321, 339 |
| Bme18I | GGWCC | 1 cut(s) | 323 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 196 |
| BmgBI | CACGTC | 1 cut(s) | 496 |
| BmgT120I | GGNCC | 3 cut(s) | 323, 471, 472 |
| BmiI | GGNNCC | 5 cut(s) | 25, 271, 335, 472, 473 |
| BmrFI | CCNGG | 3 cut(s) | 60, 321, 339 |
| BmsI | GCATC | 2 cut(s) | 121, 549 |
| BpuMI | CCSGG | 1 cut(s) | 321 |
| BsaJI | CCNNGG | 3 cut(s) | 125, 337, 338 |
| BsaWI | WCCGGW | 1 cut(s) | 330 |
| Bse1I | ACTGG | 2 cut(s) | 50, 273 |
| Bse3DI | GCAATG | 1 cut(s) | 409 |
| BseAI | TCCGGA | 1 cut(s) | 330 |
| BseBI | CCWGG | 2 cut(s) | 60, 339 |
| BseDI | CCNNGG | 3 cut(s) | 125, 337, 338 |
| BseGI | GGATG | 3 cut(s) | 136, 348, 571 |
| BseMI | GCAATG | 1 cut(s) | 409 |
| BseMII | CTCAG | 2 cut(s) | 66, 105 |
| BseNI | ACTGG | 2 cut(s) | 50, 273 |
| BseRI | GAGGAG | 1 cut(s) | 569 |
| BseSI | GKGCMC | 1 cut(s) | 475 |
| BseXI | GCAGC | 3 cut(s) | 546, 549, 617 |
| BsgI | GTGCAG | 1 cut(s) | 38 |
| BshFI | GGCC | 1 cut(s) | 473 |
| BsiHKAI | GWGCWC | 1 cut(s) | 175 |
| BsiSI | CCGG | 2 cut(s) | 321, 331 |
| BsnI | GGCC | 1 cut(s) | 473 |
| Bsp120I | GGGCCC | 1 cut(s) | 471 |
| Bsp1286I | GDGCHC | 2 cut(s) | 175, 475 |
| Bsp13I | TCCGGA | 1 cut(s) | 330 |
| Bsp143I | GATC | 3 cut(s) | 40, 295, 507 |
| BspANI | GGCC | 1 cut(s) | 473 |
| BspCNI | CTCAG | 2 cut(s) | 67, 106 |
| BspEI | TCCGGA | 1 cut(s) | 330 |
| BspLI | GGNNCC | 5 cut(s) | 25, 271, 335, 472, 473 |
| BspMAI | CTGCAG | 1 cut(s) | 652 |
| BsrDI | GCAATG | 1 cut(s) | 409 |
| BsrI | ACTGG | 2 cut(s) | 50, 273 |
| BssECI | CCNNGG | 3 cut(s) | 125, 337, 338 |
| BssMI | GATC | 3 cut(s) | 40, 295, 507 |
| BssT1I | CCWWGG | 1 cut(s) | 125 |
| Bst2UI | CCWGG | 2 cut(s) | 60, 339 |
| Bst4CI | ACNGT | 2 cut(s) | 97, 388 |
| BstC8I | GCNNGC | 1 cut(s) | 452 |
| BstDEI | CTNAG | 2 cut(s) | 75, 114 |
| BstF5I | GGATG | 3 cut(s) | 136, 348, 571 |
| BstKTI | GATC | 3 cut(s) | 43, 298, 510 |
| BstMBI | GATC | 3 cut(s) | 40, 295, 507 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 170 |
| BstNI | CCWGG | 2 cut(s) | 60, 339 |
| BstNSI | RCATGY | 2 cut(s) | 402, 454 |
| BstSCI | CCNGG | 3 cut(s) | 58, 319, 337 |
| BstSFI | CTRYAG | 1 cut(s) | 648 |
| BstSLI | GKGCMC | 1 cut(s) | 475 |
| BstV1I | GCAGC | 3 cut(s) | 546, 549, 617 |
| BsuRI | GGCC | 1 cut(s) | 473 |
| BtrI | CACGTC | 1 cut(s) | 496 |
| BtsCI | GGATG | 3 cut(s) | 136, 348, 571 |
| BtsIMutI | CAGTG | 1 cut(s) | 43 |
| Cac8I | GCNNGC | 1 cut(s) | 452 |
| Cfr13I | GGNCC | 3 cut(s) | 323, 471, 472 |
| Csp6I | GTAC | 2 cut(s) | 122, 182 |
| CviAII | CATG | 2 cut(s) | 399, 451 |
| CviJI | RGCY | 4 cut(s) | 437, 473, 505, 560 |
| CviKI_1 | RGCY | 4 cut(s) | 437, 473, 505, 560 |
| CviQI | GTAC | 2 cut(s) | 122, 182 |
| DdeI | CTNAG | 2 cut(s) | 75, 114 |
| DpnI | GATC | 3 cut(s) | 42, 297, 509 |
| DpnII | GATC | 3 cut(s) | 40, 295, 507 |
| DraIII | CACNNNGTG | 1 cut(s) | 496 |
| DriI | GACNNNNNGTC | 1 cut(s) | 196 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 196 |
| Eco130I | CCWWGG | 1 cut(s) | 125 |
| Eco24I | GRGCYC | 1 cut(s) | 475 |
| Eco47I | GGWCC | 1 cut(s) | 323 |
| EcoO109I | RGGNCCY | 1 cut(s) | 471 |
| EcoRII | CCWGG | 2 cut(s) | 58, 337 |
| EcoT14I | CCWWGG | 1 cut(s) | 125 |
| EcoT22I | ATGCAT | 1 cut(s) | 452 |
| EcoT38I | GRGCYC | 1 cut(s) | 475 |
| ErhI | CCWWGG | 1 cut(s) | 125 |
| FaeI | CATG | 2 cut(s) | 402, 454 |
| FatI | CATG | 2 cut(s) | 398, 450 |
| FauNDI | CATATG | 1 cut(s) | 12 |
| FbaI | TGATCA | 1 cut(s) | 507 |
| Fnu4HI | GCNGC | 3 cut(s) | 535, 538, 606 |
| FokI | GGATG | 3 cut(s) | 143, 355, 578 |
| FriOI | GRGCYC | 1 cut(s) | 475 |
| Fsp4HI | GCNGC | 3 cut(s) | 535, 538, 606 |
| GluI | GCNGC | 3 cut(s) | 535, 538, 606 |
| HaeIII | GGCC | 1 cut(s) | 473 |
| HapII | CCGG | 2 cut(s) | 321, 331 |
| Hin1II | CATG | 2 cut(s) | 402, 454 |
| HpaII | CCGG | 2 cut(s) | 321, 331 |
| HphI | GGTGA | 1 cut(s) | 290 |
| Hpy166II | GTNNAC | 3 cut(s) | 278, 352, 499 |
| Hpy188I | TCNGA | 2 cut(s) | 295, 631 |
| Hpy188III | TCNNGA | 4 cut(s) | 74, 188, 209, 331 |
| Hpy8I | GTNNAC | 3 cut(s) | 278, 352, 499 |
| Hpy99I | CGWCG | 2 cut(s) | 497, 638 |
| HpyAV | CCTTC | 1 cut(s) | 569 |
| HpyCH4III | ACNGT | 2 cut(s) | 97, 388 |
| HpyCH4IV | ACGT | 1 cut(s) | 495 |
| HpyCH4V | TGCA | 8 cut(s) | 19, 134, 402, 450, 454, 479, 593, 650 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 170 |
| HpyF3I | CTNAG | 2 cut(s) | 75, 114 |
| HpySE526I | ACGT | 1 cut(s) | 495 |
| Hsp92II | CATG | 2 cut(s) | 402, 454 |
| Kpn2I | TCCGGA | 1 cut(s) | 330 |
| Ksp22I | TGATCA | 1 cut(s) | 507 |
| Kzo9I | GATC | 3 cut(s) | 40, 295, 507 |
| Lsp1109I | GCAGC | 3 cut(s) | 546, 549, 617 |
| LweI | GCATC | 2 cut(s) | 121, 549 |
| MaeII | ACGT | 1 cut(s) | 495 |
| MaeIII | GTNAC | 1 cut(s) | 109 |
| MalI | GATC | 3 cut(s) | 42, 297, 509 |
| MboI | GATC | 3 cut(s) | 40, 295, 507 |
| MhlI | GDGCHC | 2 cut(s) | 175, 475 |
| MluCI | AATT | 5 cut(s) | 54, 69, 177, 222, 284 |
| MmeI | TCCRAC | 2 cut(s) | 79, 370 |
| MnlI | CCTC | 7 cut(s) | 37, 358, 386, 400, 547, 550, 595 |
| Mph1103I | ATGCAT | 1 cut(s) | 452 |
| MroI | TCCGGA | 1 cut(s) | 330 |
| MseI | TTAA | 1 cut(s) | 36 |
| MspI | CCGG | 2 cut(s) | 321, 331 |
| MspR9I | CCNGG | 3 cut(s) | 60, 321, 339 |
| MvaI | CCWGG | 2 cut(s) | 60, 339 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 170 |
| NciI | CCSGG | 1 cut(s) | 321 |
| NdeI | CATATG | 1 cut(s) | 12 |
| NdeII | GATC | 3 cut(s) | 40, 295, 507 |
| NlaIII | CATG | 2 cut(s) | 402, 454 |
| NlaIV | GGNNCC | 5 cut(s) | 25, 271, 335, 472, 473 |
| NsiI | ATGCAT | 1 cut(s) | 452 |
| NspI | RCATGY | 2 cut(s) | 402, 454 |
| PaeI | GCATGC | 1 cut(s) | 454 |
| PasI | CCCWGGG | 1 cut(s) | 338 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 498 |
| PfoI | TCCNGGA | 1 cut(s) | 58 |
| PkrI | GCNGC | 3 cut(s) | 536, 539, 607 |
| PsiI | TTATAA | 1 cut(s) | 53 |
| Psp6I | CCWGG | 2 cut(s) | 58, 337 |
| PspGI | CCWGG | 2 cut(s) | 58, 337 |
| PspN4I | GGNNCC | 5 cut(s) | 25, 271, 335, 472, 473 |
| PspOMI | GGGCCC | 1 cut(s) | 471 |
| PspPI | GGNCC | 3 cut(s) | 323, 471, 472 |
| PstI | CTGCAG | 1 cut(s) | 652 |
| RsaI | GTAC | 2 cut(s) | 123, 183 |
| RsaNI | GTAC | 2 cut(s) | 122, 182 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 3 cut(s) | 535, 538, 606 |
| Sau3AI | GATC | 3 cut(s) | 40, 295, 507 |
| Sau96I | GGNCC | 3 cut(s) | 323, 471, 472 |
| ScrFI | CCNGG | 3 cut(s) | 60, 321, 339 |
| SduI | GDGCHC | 2 cut(s) | 175, 475 |
| SfaNI | GCATC | 2 cut(s) | 121, 549 |
| SfcI | CTRYAG | 1 cut(s) | 648 |
| SinI | GGWCC | 1 cut(s) | 323 |
| SphI | GCATGC | 1 cut(s) | 454 |
| Sse9I | AATT | 5 cut(s) | 54, 69, 177, 222, 284 |
| StyD4I | CCNGG | 3 cut(s) | 58, 319, 337 |
| StyI | CCWWGG | 1 cut(s) | 125 |
| TaaI | ACNGT | 2 cut(s) | 97, 388 |
| TaiI | ACGT | 1 cut(s) | 498 |
| TaqII | GACCGA | 1 cut(s) | 419 |
| TasI | AATT | 5 cut(s) | 54, 69, 177, 222, 284 |
| TatI | WGTACW | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TscAI | CASTG | 1 cut(s) | 50 |
| TseI | GCWGC | 3 cut(s) | 534, 537, 605 |
| TspDTI | ATGAA | 2 cut(s) | 533, 582 |
| TspGWI | ACGGA | 1 cut(s) | 186 |
| TspRI | CASTG | 1 cut(s) | 50 |
| VpaK11BI | GGWCC | 1 cut(s) | 323 |
| XapI | RAATTY | 1 cut(s) | 69 |
| XceI | RCATGY | 2 cut(s) | 402, 454 |
| Zsp2I | ATGCAT | 1 cut(s) | 452 |