TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 22 - 205 | 1.8e-53 | TIR domain |
| TIR_2 | PF13676 | 25 - 121 | 1.7e-17 | TIR domain |
| NB-ARC | PF00931 | 211 - 377 | 2.8e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 442 - 511 | 2.3e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 716 - 782 | 1.6e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 824 - 893 | 6.2e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 974 - 1105 | 6.9e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1781 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2168, 3052 |
| AccBSI | CCGCTC | 1 cut(s) | 2398 |
| AccI | GTMKAC | 4 cut(s) | 96, 1214, 2614, 2757 |
| AccII | CGCG | 3 cut(s) | 407, 1831, 2894 |
| AciI | CCGC | 5 cut(s) | 103, 1255, 1829, 2398, 2416 |
| AclI | AACGTT | 1 cut(s) | 780 |
| AclWI | GGATC | 7 cut(s) | 353, 948, 2357, 2383, 2441, 2595, 2783 |
| AcuI | CTGAAG | 1 cut(s) | 1728 |
| AcyI | GRCGYC | 1 cut(s) | 2632 |
| AfaI | GTAC | 7 cut(s) | 433, 927, 963, 1446, 1948, 3124, 3302 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 1139, 2098, 2168, 2305, 2539, 2778, 2852, 3052, 3119 |
| AflII | CTTAAG | 2 cut(s) | 1847, 2203 |
| AjnI | CCWGG | 6 cut(s) | 323, 1552, 2532, 2735, 2923, 2992 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 964, 969, 996, 1001, 1768, 1800 |
| AleI | CACNNNNGTG | 1 cut(s) | 1672 |
| Alw21I | GWGCWC | 1 cut(s) | 213 |
| Alw26I | GTCTC | 5 cut(s) | 347, 1367, 2204, 2331, 3156 |
| AlwI | GGATC | 7 cut(s) | 353, 948, 2357, 2383, 2441, 2595, 2783 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1553, 2070, 3220 |
| Ama87I | CYCGRG | 1 cut(s) | 214 |
| AoxI | GGCC | 4 cut(s) | 1183, 1747, 2254, 2407 |
| ApeKI | GCWGC | 5 cut(s) | 1648, 2139, 2363, 2562, 3065 |
| AseI | ATTAAT | 1 cut(s) | 1170 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 858, 2189 |
| AspLEI | GCGC | 3 cut(s) | 1099, 1833, 2896 |
| AspS9I | GGNCC | 5 cut(s) | 454, 1748, 2407, 2733, 2903 |
| AsuC2I | CCSGG | 1 cut(s) | 1382 |
| AsuHPI | GGTGA | 5 cut(s) | 249, 1817, 2674, 3008, 3286 |
| AsuII | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| AvaI | CYCGRG | 1 cut(s) | 214 |
| AvaII | GGWCC | 3 cut(s) | 454, 2733, 2903 |
| AxyI | CCTNAGG | 1 cut(s) | 2258 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2009, 2042 |
| BanII | GRGCYC | 2 cut(s) | 213, 3292 |
| BbsI | GAAGAC | 4 cut(s) | 812, 1958, 2469, 2562 |
| Bbv12I | GWGCWC | 1 cut(s) | 213 |
| BbvI | GCAGC | 5 cut(s) | 1635, 2126, 2375, 2549, 3052 |
| BceAI | ACGGC | 2 cut(s) | 1661, 3157 |
| BciT130I | CCWGG | 6 cut(s) | 325, 1554, 2534, 2737, 2925, 2994 |
| BciVI | GTATCC | 1 cut(s) | 127 |
| BcnI | CCSGG | 1 cut(s) | 1382 |
| BcoDI | GTCTC | 5 cut(s) | 347, 1367, 2204, 2331, 3156 |
| BfaI | CTAG | 8 cut(s) | 728, 965, 1017, 1034, 1322, 1403, 1425, 1803 |
| BfmI | CTRYAG | 2 cut(s) | 1545, 3117 |
| BfrI | CTTAAG | 2 cut(s) | 1847, 2203 |
| BfuI | GTATCC | 1 cut(s) | 127 |
| BglII | AGATCT | 3 cut(s) | 178, 1457, 2128 |
| BisI | GCNGC | 5 cut(s) | 1649, 2140, 2364, 2563, 3066 |
| BlpI | GCTNAGC | 1 cut(s) | 723 |
| BlsI | GCNGC | 5 cut(s) | 1650, 2141, 2365, 2564, 3067 |
| BmcAI | AGTACT | 1 cut(s) | 963 |
| Bme1390I | CCNGG | 7 cut(s) | 325, 1382, 1554, 2534, 2737, 2925, 2994 |
| Bme18I | GGWCC | 3 cut(s) | 454, 2733, 2903 |
| BmeT110I | CYCGRG | 1 cut(s) | 214 |
| BmgT120I | GGNCC | 5 cut(s) | 454, 1748, 2407, 2733, 2903 |
| BmiI | GGNNCC | 5 cut(s) | 1750, 2408, 2844, 2988, 3110 |
| BmrFI | CCNGG | 7 cut(s) | 325, 1382, 1554, 2534, 2737, 2925, 2994 |
| BmsI | GCATC | 4 cut(s) | 38, 887, 1485, 1842 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1590 |
| BpiI | GAAGAC | 4 cut(s) | 812, 1958, 2469, 2562 |
| BpmI | CTGGAG | 4 cut(s) | 1200, 1655, 2976, 3029 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2645 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 723 |
| Bpu14I | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| BpuEI | CTTGAG | 3 cut(s) | 227, 650, 1792 |
| BpuMI | CCSGG | 1 cut(s) | 1382 |
| Bsa29I | ATCGAT | 1 cut(s) | 1917 |
| BsaBI | GATNNNNATC | 3 cut(s) | 177, 939, 3210 |
| BsaHI | GRCGYC | 1 cut(s) | 2632 |
| BsaI | GGTCTC | 1 cut(s) | 3156 |
| BsaJI | CCNNGG | 5 cut(s) | 24, 148, 2303, 2456, 2923 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 1139, 2098, 2168, 2305, 2539, 2778, 2852, 3052, 3119 |
| Bse118I | RCCGGY | 1 cut(s) | 340 |
| Bse1I | ACTGG | 2 cut(s) | 1672, 2735 |
| Bse21I | CCTNAGG | 1 cut(s) | 2258 |
| Bse3DI | GCAATG | 2 cut(s) | 237, 2832 |
| Bse8I | GATNNNNATC | 3 cut(s) | 177, 939, 3210 |
| BseBI | CCWGG | 6 cut(s) | 325, 1554, 2534, 2737, 2925, 2994 |
| BseCI | ATCGAT | 1 cut(s) | 1917 |
| BseDI | CCNNGG | 5 cut(s) | 24, 148, 2303, 2456, 2923 |
| BseGI | GGATG | 5 cut(s) | 699, 1500, 1708, 2386, 2792 |
| BseJI | GATNNNNATC | 3 cut(s) | 177, 939, 3210 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 1139, 2098, 2168, 2305, 2539, 2778, 2852, 3052, 3119 |
| BseMI | GCAATG | 2 cut(s) | 237, 2832 |
| BseMII | CTCAG | 3 cut(s) | 2077, 2799, 2889 |
| BseNI | ACTGG | 2 cut(s) | 1672, 2735 |
| BseRI | GAGGAG | 2 cut(s) | 45, 1454 |
| BseXI | GCAGC | 5 cut(s) | 1635, 2126, 2375, 2549, 3052 |
| Bsh1236I | CGCG | 3 cut(s) | 407, 1831, 2894 |
| Bsh1285I | CGRYCG | 2 cut(s) | 175, 2220 |
| BshFI | GGCC | 4 cut(s) | 1185, 1749, 2256, 2409 |
| BshVI | ATCGAT | 1 cut(s) | 1917 |
| BsiEI | CGRYCG | 2 cut(s) | 175, 2220 |
| BsiHKAI | GWGCWC | 1 cut(s) | 213 |
| BsiHKCI | CYCGRG | 1 cut(s) | 214 |
| BsiSI | CCGG | 2 cut(s) | 341, 1381 |
| BslFI | GGGAC | 2 cut(s) | 399, 2979 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 1139, 2098, 2168, 2305, 2539, 2778, 2852, 3052, 3119 |
| BsmAI | GTCTC | 5 cut(s) | 347, 1367, 2204, 2331, 3156 |
| BsmFI | GGGAC | 2 cut(s) | 399, 2979 |
| BsmI | GAATGC | 1 cut(s) | 502 |
| BsnI | GGCC | 4 cut(s) | 1185, 1749, 2256, 2409 |
| Bso31I | GGTCTC | 1 cut(s) | 3156 |
| BsoBI | CYCGRG | 1 cut(s) | 214 |
| Bsp119I | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| Bsp1286I | GDGCHC | 2 cut(s) | 213, 3292 |
| Bsp1407I | TGTACA | 1 cut(s) | 3300 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 723 |
| Bsp68I | TCGCGA | 1 cut(s) | 407 |
| BspACI | CCGC | 5 cut(s) | 103, 1255, 1829, 2398, 2416 |
| BspANI | GGCC | 4 cut(s) | 1185, 1749, 2256, 2409 |
| BspCNI | CTCAG | 3 cut(s) | 2076, 2798, 2888 |
| BspDI | ATCGAT | 1 cut(s) | 1917 |
| BspFNI | CGCG | 3 cut(s) | 407, 1831, 2894 |
| BspHI | TCATGA | 1 cut(s) | 655 |
| BspLI | GGNNCC | 5 cut(s) | 1750, 2408, 2844, 2988, 3110 |
| BspPI | GGATC | 7 cut(s) | 353, 948, 2357, 2383, 2441, 2595, 2783 |
| BspQI | GCTCTTC | 1 cut(s) | 1331 |
| BspT104I | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| BspTI | CTTAAG | 2 cut(s) | 1847, 2203 |
| BspTNI | GGTCTC | 1 cut(s) | 3156 |
| BsrBI | CCGCTC | 1 cut(s) | 2398 |
| BsrDI | GCAATG | 2 cut(s) | 237, 2832 |
| BsrFI | RCCGGY | 1 cut(s) | 340 |
| BsrGI | TGTACA | 1 cut(s) | 3300 |
| BsrI | ACTGG | 2 cut(s) | 1672, 2735 |
| BssAI | RCCGGY | 1 cut(s) | 340 |
| BssECI | CCNNGG | 5 cut(s) | 24, 148, 2303, 2456, 2923 |
| BssNI | GRCGYC | 1 cut(s) | 2632 |
| BssT1I | CCWWGG | 3 cut(s) | 148, 2303, 2456 |
| Bst2UI | CCWGG | 6 cut(s) | 325, 1554, 2534, 2737, 2925, 2994 |
| Bst4CI | ACNGT | 3 cut(s) | 1155, 1565, 3222 |
| Bst6I | CTCTTC | 8 cut(s) | 1320, 1331, 1656, 1937, 2121, 2457, 2700, 3201 |
| BstACI | GRCGYC | 1 cut(s) | 2632 |
| BstAFI | CTTAAG | 2 cut(s) | 1847, 2203 |
| BstAUI | TGTACA | 1 cut(s) | 3300 |
| BstBI | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| BstC8I | GCNNGC | 5 cut(s) | 573, 1109, 1113, 2392, 2396 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2776, 3117 |
| BstF5I | GGATG | 5 cut(s) | 699, 1500, 1708, 2386, 2792 |
| BstFNI | CGCG | 3 cut(s) | 407, 1831, 2894 |
| BstHHI | GCGC | 3 cut(s) | 1099, 1833, 2896 |
| BstMAI | GTCTC | 5 cut(s) | 347, 1367, 2204, 2331, 3156 |
| BstMCI | CGRYCG | 2 cut(s) | 175, 2220 |
| BstNI | CCWGG | 6 cut(s) | 325, 1554, 2534, 2737, 2925, 2994 |
| BstNSI | RCATGY | 4 cut(s) | 1115, 1362, 2273, 3272 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1590 |
| BstSCI | CCNGG | 7 cut(s) | 323, 1380, 1552, 2532, 2735, 2923, 2992 |
| BstSFI | CTRYAG | 2 cut(s) | 1545, 3117 |
| BstUI | CGCG | 3 cut(s) | 407, 1831, 2894 |
| BstV1I | GCAGC | 5 cut(s) | 1635, 2126, 2375, 2549, 3052 |
| BstV2I | GAAGAC | 4 cut(s) | 812, 1958, 2469, 2562 |
| BstX2I | RGATCY | 6 cut(s) | 178, 358, 1457, 2128, 2587, 2788 |
| BstYI | RGATCY | 6 cut(s) | 178, 358, 1457, 2128, 2587, 2788 |
| Bsu15I | ATCGAT | 1 cut(s) | 1917 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2258 |
| BsuI | GTATCC | 1 cut(s) | 127 |
| BsuRI | GGCC | 4 cut(s) | 1185, 1749, 2256, 2409 |
| BsuTUI | ATCGAT | 1 cut(s) | 1917 |
| BtsCI | GGATG | 5 cut(s) | 699, 1500, 1708, 2386, 2792 |
| BtsI | GCAGTG | 1 cut(s) | 763 |
| BtsIMutI | CAGTG | 4 cut(s) | 763, 1679, 1966, 2071 |
| BtuMI | TCGCGA | 1 cut(s) | 407 |
| Cac8I | GCNNGC | 5 cut(s) | 573, 1109, 1113, 2392, 2396 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1553, 2070, 3220 |
| CciI | TCATGA | 1 cut(s) | 655 |
| CfoI | GCGC | 3 cut(s) | 1099, 1833, 2896 |
| Cfr10I | RCCGGY | 1 cut(s) | 340 |
| Cfr13I | GGNCC | 5 cut(s) | 454, 1748, 2407, 2733, 2903 |
| ClaI | ATCGAT | 1 cut(s) | 1917 |
| CpoI | CGGWCCG | 1 cut(s) | 2903 |
| CseI | GACGC | 2 cut(s) | 2369, 2640 |
| CsiI | ACCWGGT | 1 cut(s) | 1552 |
| Csp6I | GTAC | 7 cut(s) | 432, 926, 962, 1445, 1947, 3123, 3301 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 475, 510, 1959, 1994, 2961, 2996 |
| CspI | CGGWCCG | 1 cut(s) | 2903 |
| CviQI | GTAC | 7 cut(s) | 432, 926, 962, 1445, 1947, 3123, 3301 |
| Eam1104I | CTCTTC | 8 cut(s) | 1320, 1331, 1656, 1937, 2121, 2457, 2700, 3201 |
| EarI | CTCTTC | 8 cut(s) | 1320, 1331, 1656, 1937, 2121, 2457, 2700, 3201 |
| Ecl136II | GAGCTC | 1 cut(s) | 211 |
| Eco130I | CCWWGG | 3 cut(s) | 148, 2303, 2456 |
| Eco147I | AGGCCT | 1 cut(s) | 1185 |
| Eco24I | GRGCYC | 2 cut(s) | 213, 3292 |
| Eco31I | GGTCTC | 1 cut(s) | 3156 |
| Eco32I | GATATC | 1 cut(s) | 2545 |
| Eco47I | GGWCC | 3 cut(s) | 454, 2733, 2903 |
| Eco53kI | GAGCTC | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 1 cut(s) | 1728 |
| Eco81I | CCTNAGG | 1 cut(s) | 2258 |
| Eco88I | CYCGRG | 1 cut(s) | 214 |
| EcoICRI | GAGCTC | 1 cut(s) | 211 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2776, 3117 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1748, 2407 |
| EcoRI | GAATTC | 1 cut(s) | 1721 |
| EcoRII | CCWGG | 6 cut(s) | 323, 1552, 2532, 2735, 2923, 2992 |
| EcoRV | GATATC | 1 cut(s) | 2545 |
| EcoT14I | CCWWGG | 3 cut(s) | 148, 2303, 2456 |
| EcoT22I | ATGCAT | 3 cut(s) | 317, 1490, 1500 |
| EcoT38I | GRGCYC | 2 cut(s) | 213, 3292 |
| ErhI | CCWWGG | 3 cut(s) | 148, 2303, 2456 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 884, 916 |
| FaqI | GGGAC | 2 cut(s) | 399, 2979 |
| FauI | CCCGC | 3 cut(s) | 110, 1248, 1836 |
| FblI | GTMKAC | 4 cut(s) | 96, 1214, 2614, 2757 |
| Fnu4HI | GCNGC | 5 cut(s) | 1649, 2140, 2364, 2563, 3066 |
| FokI | GGATG | 5 cut(s) | 706, 1507, 1715, 2393, 2779 |
| FriOI | GRGCYC | 2 cut(s) | 213, 3292 |
| Fsp4HI | GCNGC | 5 cut(s) | 1649, 2140, 2364, 2563, 3066 |
| FspBI | CTAG | 8 cut(s) | 728, 965, 1017, 1034, 1322, 1403, 1425, 1803 |
| GlaI | GCGC | 3 cut(s) | 1098, 1832, 2895 |
| GluI | GCNGC | 5 cut(s) | 1649, 2140, 2364, 2563, 3066 |
| GsuI | CTGGAG | 4 cut(s) | 1200, 1655, 2976, 3029 |
| HaeIII | GGCC | 4 cut(s) | 1185, 1749, 2256, 2409 |
| HapII | CCGG | 2 cut(s) | 341, 1381 |
| HgaI | GACGC | 2 cut(s) | 2369, 2640 |
| HhaI | GCGC | 3 cut(s) | 1099, 1833, 2896 |
| Hin1I | GRCGYC | 1 cut(s) | 2632 |
| Hin6I | GCGC | 3 cut(s) | 1097, 1831, 2894 |
| HinP1I | GCGC | 3 cut(s) | 1097, 1831, 2894 |
| HincII | GTYRAC | 2 cut(s) | 1215, 1559 |
| HindII | GTYRAC | 2 cut(s) | 1215, 1559 |
| HindIII | AAGCTT | 1 cut(s) | 2642 |
| HpaII | CCGG | 2 cut(s) | 341, 1381 |
| HphI | GGTGA | 5 cut(s) | 249, 1817, 2674, 3008, 3286 |
| Hpy166II | GTNNAC | 8 cut(s) | 97, 763, 1215, 1559, 1894, 2615, 2758, 3301 |
| Hpy188I | TCNGA | 8 cut(s) | 367, 1995, 2380, 2788, 2907, 2958, 3163, 3216 |
| Hpy8I | GTNNAC | 8 cut(s) | 97, 763, 1215, 1559, 1894, 2615, 2758, 3301 |
| HpyCH4III | ACNGT | 3 cut(s) | 1155, 1565, 3222 |
| HpyCH4IV | ACGT | 5 cut(s) | 369, 388, 780, 1027, 2524 |
| HpySE526I | ACGT | 5 cut(s) | 369, 388, 780, 1027, 2524 |
| Hsp92I | GRCGYC | 1 cut(s) | 2632 |
| HspAI | GCGC | 3 cut(s) | 1097, 1831, 2894 |
| LguI | GCTCTTC | 1 cut(s) | 1331 |
| LmnI | GCTCC | 5 cut(s) | 58, 216, 1622, 2173, 3010 |
| Lsp1109I | GCAGC | 5 cut(s) | 1635, 2126, 2375, 2549, 3052 |
| LweI | GCATC | 4 cut(s) | 38, 887, 1485, 1842 |
| MabI | ACCWGGT | 1 cut(s) | 1552 |
| MaeI | CTAG | 8 cut(s) | 728, 965, 1017, 1034, 1322, 1403, 1425, 1803 |
| MaeII | ACGT | 5 cut(s) | 369, 388, 780, 1027, 2524 |
| MaeIII | GTNAC | 3 cut(s) | 1535, 2815, 2996 |
| MbiI | CCGCTC | 1 cut(s) | 2398 |
| MfeI | CAATTG | 4 cut(s) | 142, 1626, 2238, 2684 |
| MflI | RGATCY | 6 cut(s) | 178, 358, 1457, 2128, 2587, 2788 |
| MhlI | GDGCHC | 2 cut(s) | 213, 3292 |
| MlyI | GAGTC | 2 cut(s) | 2105, 2446 |
| MmeI | TCCRAC | 3 cut(s) | 352, 1307, 1838 |
| Mph1103I | ATGCAT | 3 cut(s) | 317, 1490, 1500 |
| MroXI | GAANNNNTTC | 2 cut(s) | 858, 2189 |
| MslI | CAYNNNNRTG | 3 cut(s) | 871, 1493, 1672 |
| MspA1I | CMGCKG | 1 cut(s) | 3065 |
| MspCI | CTTAAG | 2 cut(s) | 1847, 2203 |
| MspI | CCGG | 2 cut(s) | 341, 1381 |
| MspR9I | CCNGG | 7 cut(s) | 325, 1382, 1554, 2534, 2737, 2925, 2994 |
| MunI | CAATTG | 4 cut(s) | 142, 1626, 2238, 2684 |
| Mva1269I | GAATGC | 1 cut(s) | 502 |
| MvaI | CCWGG | 6 cut(s) | 325, 1554, 2534, 2737, 2925, 2994 |
| MvnI | CGCG | 3 cut(s) | 407, 1831, 2894 |
| NciI | CCSGG | 1 cut(s) | 1382 |
| NlaIV | GGNNCC | 5 cut(s) | 1750, 2408, 2844, 2988, 3110 |
| NmeAIII | GCCGAG | 1 cut(s) | 5 |
| NmuCI | GTSAC | 3 cut(s) | 1535, 2815, 2996 |
| NruI | TCGCGA | 1 cut(s) | 407 |
| NsiI | ATGCAT | 3 cut(s) | 317, 1490, 1500 |
| NspI | RCATGY | 4 cut(s) | 1115, 1362, 2273, 3272 |
| NspV | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| OliI | CACNNNNGTG | 1 cut(s) | 1672 |
| PaeI | GCATGC | 1 cut(s) | 1115 |
| PagI | TCATGA | 1 cut(s) | 655 |
| PceI | AGGCCT | 1 cut(s) | 1185 |
| PciSI | GCTCTTC | 1 cut(s) | 1331 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1923 |
| PctI | GAATGC | 1 cut(s) | 502 |
| PdmI | GAANNNNTTC | 2 cut(s) | 858, 2189 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2168, 3052 |
| PfoI | TCCNGGA | 2 cut(s) | 323, 2532 |
| PkrI | GCNGC | 5 cut(s) | 1650, 2141, 2365, 2564, 3067 |
| Ple19I | CGATCG | 2 cut(s) | 175, 2220 |
| PleI | GAGTC | 2 cut(s) | 2105, 2445 |
| PpsI | GAGTC | 2 cut(s) | 2105, 2445 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1590 |
| PshBI | ATTAAT | 1 cut(s) | 1170 |
| PsiI | TTATAA | 1 cut(s) | 1781 |
| Psp124BI | GAGCTC | 1 cut(s) | 213 |
| Psp1406I | AACGTT | 1 cut(s) | 780 |
| Psp6I | CCWGG | 6 cut(s) | 323, 1552, 2532, 2735, 2923, 2992 |
| PspGI | CCWGG | 6 cut(s) | 323, 1552, 2532, 2735, 2923, 2992 |
| PspN4I | GGNNCC | 5 cut(s) | 1750, 2408, 2844, 2988, 3110 |
| PspPI | GGNCC | 5 cut(s) | 454, 1748, 2407, 2733, 2903 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1553, 2070, 3220 |
| PsuI | RGATCY | 6 cut(s) | 178, 358, 1457, 2128, 2587, 2788 |
| PvuI | CGATCG | 2 cut(s) | 175, 2220 |
| PvuII | CAGCTG | 1 cut(s) | 3065 |
| RruI | TCGCGA | 1 cut(s) | 407 |
| RsaI | GTAC | 7 cut(s) | 433, 927, 963, 1446, 1948, 3124, 3302 |
| RsaNI | GTAC | 7 cut(s) | 432, 926, 962, 1445, 1947, 3123, 3301 |
| RseI | CAYNNNNRTG | 3 cut(s) | 871, 1493, 1672 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2903 |
| RsrII | CGGWCCG | 1 cut(s) | 2903 |
| SacI | GAGCTC | 1 cut(s) | 213 |
| SalI | GTCGAC | 1 cut(s) | 1213 |
| SapI | GCTCTTC | 1 cut(s) | 1331 |
| SatI | GCNGC | 5 cut(s) | 1649, 2140, 2364, 2563, 3066 |
| Sau96I | GGNCC | 5 cut(s) | 454, 1748, 2407, 2733, 2903 |
| ScaI | AGTACT | 1 cut(s) | 963 |
| SchI | GAGTC | 2 cut(s) | 2105, 2446 |
| ScrFI | CCNGG | 7 cut(s) | 325, 1382, 1554, 2534, 2737, 2925, 2994 |
| SduI | GDGCHC | 2 cut(s) | 213, 3292 |
| SexAI | ACCWGGT | 1 cut(s) | 1552 |
| SfaNI | GCATC | 4 cut(s) | 38, 887, 1485, 1842 |
| SfcI | CTRYAG | 2 cut(s) | 1545, 3117 |
| SfuI | TTCGAA | 3 cut(s) | 506, 3090, 3231 |
| SinI | GGWCC | 3 cut(s) | 454, 2733, 2903 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 871, 1493, 1672 |
| SmlI | CTYRAG | 5 cut(s) | 206, 629, 1771, 1847, 2203 |
| SmoI | CTYRAG | 5 cut(s) | 206, 629, 1771, 1847, 2203 |
| SphI | GCATGC | 1 cut(s) | 1115 |
| SseBI | AGGCCT | 1 cut(s) | 1185 |
| SsiI | CCGC | 5 cut(s) | 103, 1255, 1829, 2398, 2416 |
| SspMI | CTAG | 8 cut(s) | 728, 965, 1017, 1034, 1322, 1403, 1425, 1803 |
| SstI | GAGCTC | 1 cut(s) | 213 |
| StuI | AGGCCT | 1 cut(s) | 1185 |
| StyD4I | CCNGG | 7 cut(s) | 323, 1380, 1552, 2532, 2735, 2923, 2992 |
| StyI | CCWWGG | 3 cut(s) | 148, 2303, 2456 |
| TaaI | ACNGT | 3 cut(s) | 1155, 1565, 3222 |
| TaiI | ACGT | 5 cut(s) | 372, 391, 783, 1030, 2527 |
| TaqII | GACCGA | 1 cut(s) | 2891 |
| TatI | WGTACW | 4 cut(s) | 925, 961, 1444, 3300 |
| TscAI | CASTG | 4 cut(s) | 770, 1679, 1966, 2071 |
| TseFI | GTSAC | 3 cut(s) | 1535, 2815, 2996 |
| TseI | GCWGC | 5 cut(s) | 1648, 2139, 2363, 2562, 3065 |
| Tsp45I | GTSAC | 3 cut(s) | 1535, 2815, 2996 |
| TspGWI | ACGGA | 1 cut(s) | 1507 |
| TspRI | CASTG | 4 cut(s) | 770, 1679, 1966, 2071 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2168, 3052 |
| Vha464I | CTTAAG | 2 cut(s) | 1847, 2203 |
| VpaK11BI | GGWCC | 3 cut(s) | 454, 2733, 2903 |
| VspI | ATTAAT | 1 cut(s) | 1170 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2776, 3117 |
| XceI | RCATGY | 4 cut(s) | 1115, 1362, 2273, 3272 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2853 |
| XmiI | GTMKAC | 4 cut(s) | 96, 1214, 2614, 2757 |
| XmnI | GAANNNNTTC | 2 cut(s) | 858, 2189 |
| XspI | CTAG | 8 cut(s) | 728, 965, 1017, 1034, 1322, 1403, 1425, 1803 |
| ZrmI | AGTACT | 1 cut(s) | 963 |
| Zsp2I | ATGCAT | 3 cut(s) | 317, 1490, 1500 |