resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 186 | 1.2e-39 | TIR domain |
| TIR_2 | PF13676 | 22 - 116 | 4.3e-14 | TIR domain |
| NB-ARC | PF00931 | 197 - 360 | 1.4e-18 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 428 - 498 | 1.6e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 687 - 772 | 2.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 688 - 794 | 3.9e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 849 - 927 | 8.9e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 990 - 1115 | 9.9e-17 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 267, 2941 |
| AccI | GTMKAC | 2 cut(s) | 2173, 3030 |
| AccII | CGCG | 1 cut(s) | 91 |
| AccIII | TCCGGA | 1 cut(s) | 2294 |
| AciI | CCGC | 4 cut(s) | 660, 1091, 1506, 2661 |
| AclI | AACGTT | 1 cut(s) | 1120 |
| AclWI | GGATC | 6 cut(s) | 38, 719, 1177, 1906, 2136, 3363 |
| AcoI | YGGCCR | 1 cut(s) | 2838 |
| AcuI | CTGAAG | 3 cut(s) | 24, 1650, 3003 |
| AdeI | CACNNNGTG | 1 cut(s) | 3243 |
| AfaI | GTAC | 8 cut(s) | 435, 534, 546, 718, 1350, 2254, 2723, 3152 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 708, 1976, 2552 |
| AflII | CTTAAG | 2 cut(s) | 2656, 2725 |
| AflIII | ACRYGT | 1 cut(s) | 1848 |
| AhlI | ACTAGT | 2 cut(s) | 3265, 3358 |
| AjiI | CACGTC | 1 cut(s) | 264 |
| AjnI | CCWGG | 5 cut(s) | 93, 949, 2683, 2944, 2971 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 319, 351, 564, 596, 2515, 2547 |
| Alw21I | GWGCWC | 3 cut(s) | 510, 1683, 2611 |
| Alw26I | GTCTC | 6 cut(s) | 531, 813, 844, 1416, 3222, 3349 |
| Alw44I | GTGCAC | 1 cut(s) | 1679 |
| AlwI | GGATC | 6 cut(s) | 38, 719, 1177, 1906, 2136, 3363 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 47 |
| Aor13HI | TCCGGA | 1 cut(s) | 2294 |
| AoxI | GGCC | 2 cut(s) | 2838, 3290 |
| ApaLI | GTGCAC | 1 cut(s) | 1679 |
| ApeKI | GCWGC | 5 cut(s) | 446, 1288, 1571, 1809, 2736 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1453, 1485 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 168 |
| AspLEI | GCGC | 2 cut(s) | 93, 3160 |
| AspS9I | GGNCC | 3 cut(s) | 898, 2272, 3290 |
| AsuC2I | CCSGG | 2 cut(s) | 1503, 2842 |
| AsuHPI | GGTGA | 5 cut(s) | 95, 1109, 1253, 1958, 2960 |
| AsuII | TTCGAA | 2 cut(s) | 172, 1770 |
| AsuNHI | GCTAGC | 1 cut(s) | 2308 |
| AvaII | GGWCC | 2 cut(s) | 898, 2272 |
| BaeGI | GKGCMC | 1 cut(s) | 1683 |
| BanI | GGYRCC | 2 cut(s) | 267, 2941 |
| BanII | GRGCYC | 1 cut(s) | 348 |
| BauI | CACGAG | 1 cut(s) | 3219 |
| BbsI | GAAGAC | 2 cut(s) | 1136, 2237 |
| Bbv12I | GWGCWC | 3 cut(s) | 510, 1683, 2611 |
| BbvI | GCAGC | 5 cut(s) | 433, 1300, 1583, 1821, 2748 |
| BccI | CCATC | 8 cut(s) | 236, 1978, 2111, 2147, 2597, 2789, 3058, 3102 |
| BciT130I | CCWGG | 5 cut(s) | 95, 951, 2685, 2946, 2973 |
| BciVI | GTATCC | 1 cut(s) | 616 |
| BclI | TGATCA | 2 cut(s) | 130, 1189 |
| BcnI | CCSGG | 2 cut(s) | 1503, 2842 |
| BcoDI | GTCTC | 6 cut(s) | 531, 813, 844, 1416, 3222, 3349 |
| BcuI | ACTAGT | 2 cut(s) | 3265, 3358 |
| BfmI | CTRYAG | 2 cut(s) | 567, 703 |
| BfrI | CTTAAG | 2 cut(s) | 2656, 2725 |
| BfuI | GTATCC | 1 cut(s) | 616 |
| BglII | AGATCT | 2 cut(s) | 494, 1933 |
| BisI | GCNGC | 5 cut(s) | 447, 1289, 1572, 1810, 2737 |
| BlsI | GCNGC | 5 cut(s) | 448, 1290, 1573, 1811, 2738 |
| Bme1390I | CCNGG | 7 cut(s) | 95, 951, 1503, 2685, 2842, 2946, 2973 |
| Bme18I | GGWCC | 2 cut(s) | 898, 2272 |
| BmgBI | CACGTC | 1 cut(s) | 264 |
| BmgT120I | GGNCC | 3 cut(s) | 898, 2272, 3290 |
| BmiI | GGNNCC | 4 cut(s) | 269, 345, 564, 2943 |
| BmrFI | CCNGG | 7 cut(s) | 95, 951, 1503, 2685, 2842, 2946, 2973 |
| BmrI | ACTGGG | 1 cut(s) | 636 |
| BmsI | GCATC | 7 cut(s) | 14, 1014, 1036, 1117, 1934, 2288, 2808 |
| BmtI | GCTAGC | 1 cut(s) | 2312 |
| BmuI | ACTGGG | 1 cut(s) | 636 |
| BpiI | GAAGAC | 2 cut(s) | 1136, 2237 |
| BpmI | CTGGAG | 1 cut(s) | 3024 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2706 |
| Bpu14I | TTCGAA | 2 cut(s) | 172, 1770 |
| BpuEI | CTTGAG | 6 cut(s) | 764, 1479, 1958, 1979, 2084, 2732 |
| BpuMI | CCSGG | 2 cut(s) | 1503, 2842 |
| Bsa29I | ATCGAT | 2 cut(s) | 2485, 2512 |
| BsaI | GGTCTC | 1 cut(s) | 1416 |
| BsaJI | CCNNGG | 6 cut(s) | 16, 94, 950, 1501, 2329, 2462 |
| BsaWI | WCCGGW | 2 cut(s) | 1774, 2294 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 700, 730 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 708, 1976, 2552 |
| Bse118I | RCCGGY | 1 cut(s) | 502 |
| Bse1I | ACTGG | 3 cut(s) | 631, 827, 2756 |
| Bse3DI | GCAATG | 1 cut(s) | 1715 |
| BseAI | TCCGGA | 1 cut(s) | 2294 |
| BseBI | CCWGG | 5 cut(s) | 95, 951, 2685, 2946, 2973 |
| BseCI | ATCGAT | 2 cut(s) | 2485, 2512 |
| BseDI | CCNNGG | 6 cut(s) | 16, 94, 950, 1501, 2329, 2462 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 708, 1976, 2552 |
| BseMI | GCAATG | 1 cut(s) | 1715 |
| BseNI | ACTGG | 3 cut(s) | 631, 827, 2756 |
| BseRI | GAGGAG | 2 cut(s) | 1973, 2535 |
| BseSI | GKGCMC | 1 cut(s) | 1683 |
| BseXI | GCAGC | 5 cut(s) | 433, 1300, 1583, 1821, 2748 |
| BseYI | CCCAGC | 1 cut(s) | 1065 |
| Bsh1236I | CGCG | 1 cut(s) | 91 |
| BshFI | GGCC | 2 cut(s) | 2840, 3292 |
| BshNI | GGYRCC | 2 cut(s) | 267, 2941 |
| BshVI | ATCGAT | 2 cut(s) | 2485, 2512 |
| BsiHKAI | GWGCWC | 3 cut(s) | 510, 1683, 2611 |
| BsiSI | CCGG | 5 cut(s) | 503, 1503, 1775, 2295, 2841 |
| BslFI | GGGAC | 3 cut(s) | 2170, 2458, 2485 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 708, 1976, 2552 |
| BsmAI | GTCTC | 6 cut(s) | 531, 813, 844, 1416, 3222, 3349 |
| BsmFI | GGGAC | 3 cut(s) | 2170, 2458, 2485 |
| BsmI | GAATGC | 1 cut(s) | 386 |
| BsnI | GGCC | 2 cut(s) | 2840, 3292 |
| Bso31I | GGTCTC | 1 cut(s) | 1416 |
| Bsp119I | TTCGAA | 2 cut(s) | 172, 1770 |
| Bsp1286I | GDGCHC | 4 cut(s) | 348, 510, 1683, 2611 |
| Bsp13I | TCCGGA | 1 cut(s) | 2294 |
| Bsp19I | CCATGG | 1 cut(s) | 2462 |
| BspACI | CCGC | 4 cut(s) | 660, 1091, 1506, 2661 |
| BspANI | GGCC | 2 cut(s) | 2840, 3292 |
| BspDI | ATCGAT | 2 cut(s) | 2485, 2512 |
| BspEI | TCCGGA | 1 cut(s) | 2294 |
| BspFNI | CGCG | 1 cut(s) | 91 |
| BspHI | TCATGA | 1 cut(s) | 801 |
| BspLI | GGNNCC | 4 cut(s) | 269, 345, 564, 2943 |
| BspMAI | CTGCAG | 1 cut(s) | 571 |
| BspOI | GCTAGC | 1 cut(s) | 2312 |
| BspPI | GGATC | 6 cut(s) | 38, 719, 1177, 1906, 2136, 3363 |
| BspQI | GCTCTTC | 2 cut(s) | 159, 1056 |
| BspT104I | TTCGAA | 2 cut(s) | 172, 1770 |
| BspT107I | GGYRCC | 2 cut(s) | 267, 2941 |
| BspTI | CTTAAG | 2 cut(s) | 2656, 2725 |
| BspTNI | GGTCTC | 1 cut(s) | 1416 |
| BsrDI | GCAATG | 1 cut(s) | 1715 |
| BsrFI | RCCGGY | 1 cut(s) | 502 |
| BsrI | ACTGG | 3 cut(s) | 631, 827, 2756 |
| BssAI | RCCGGY | 1 cut(s) | 502 |
| BssECI | CCNNGG | 6 cut(s) | 16, 94, 950, 1501, 2329, 2462 |
| BssNAI | GTATAC | 1 cut(s) | 2174 |
| BssSI | CACGAG | 1 cut(s) | 3219 |
| BssT1I | CCWWGG | 2 cut(s) | 2329, 2462 |
| Bst1107I | GTATAC | 1 cut(s) | 2174 |
| Bst2BI | CACGAG | 1 cut(s) | 3219 |
| Bst2UI | CCWGG | 5 cut(s) | 95, 951, 2685, 2946, 2973 |
| Bst4CI | ACNGT | 3 cut(s) | 216, 2941, 3254 |
| Bst6I | CTCTTC | 8 cut(s) | 159, 203, 522, 834, 1056, 1075, 2522, 3141 |
| BstAFI | CTTAAG | 2 cut(s) | 2656, 2725 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1678 |
| BstBI | TTCGAA | 2 cut(s) | 172, 1770 |
| BstC8I | GCNNGC | 6 cut(s) | 225, 567, 989, 2310, 2699, 2741 |
| BstDSI | CCRYGG | 2 cut(s) | 16, 2462 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 706, 2550 |
| BstFNI | CGCG | 1 cut(s) | 91 |
| BstHHI | GCGC | 2 cut(s) | 93, 3160 |
| BstMAI | GTCTC | 6 cut(s) | 531, 813, 844, 1416, 3222, 3349 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 314, 698, 1512, 1669, 1678, 2707, 3080 |
| BstNI | CCWGG | 5 cut(s) | 95, 951, 2685, 2946, 2973 |
| BstNSI | RCATGY | 5 cut(s) | 832, 1002, 1320, 1648, 1852 |
| BstSCI | CCNGG | 7 cut(s) | 93, 949, 1501, 2683, 2840, 2944, 2971 |
| BstSFI | CTRYAG | 2 cut(s) | 567, 703 |
| BstSLI | GKGCMC | 1 cut(s) | 1683 |
| BstUI | CGCG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 5 cut(s) | 433, 1300, 1583, 1821, 2748 |
| BstV2I | GAAGAC | 2 cut(s) | 1136, 2237 |
| BstX2I | RGATCY | 6 cut(s) | 43, 494, 711, 1911, 1933, 2128 |
| BstYI | RGATCY | 6 cut(s) | 43, 494, 711, 1911, 1933, 2128 |
| BstZ17I | GTATAC | 1 cut(s) | 2174 |
| Bsu15I | ATCGAT | 2 cut(s) | 2485, 2512 |
| BsuI | GTATCC | 1 cut(s) | 616 |
| BsuRI | GGCC | 2 cut(s) | 2840, 3292 |
| BsuTUI | ATCGAT | 2 cut(s) | 2485, 2512 |
| BtgI | CCRYGG | 2 cut(s) | 16, 2462 |
| BtrI | CACGTC | 1 cut(s) | 264 |
| BtsI | GCAGTG | 1 cut(s) | 3109 |
| BtsIMutI | CAGTG | 3 cut(s) | 2210, 3027, 3109 |
| Cac8I | GCNNGC | 6 cut(s) | 225, 567, 989, 2310, 2699, 2741 |
| CaiI | CAGNNNCTG | 1 cut(s) | 47 |
| CciI | TCATGA | 1 cut(s) | 801 |
| CfoI | GCGC | 2 cut(s) | 93, 3160 |
| Cfr10I | RCCGGY | 1 cut(s) | 502 |
| Cfr13I | GGNCC | 3 cut(s) | 898, 2272, 3290 |
| ClaI | ATCGAT | 2 cut(s) | 2485, 2512 |
| Csp6I | GTAC | 8 cut(s) | 434, 533, 545, 717, 1349, 2253, 2722, 3151 |
| CviQI | GTAC | 8 cut(s) | 434, 533, 545, 717, 1349, 2253, 2722, 3151 |
| DraI | TTTAAA | 1 cut(s) | 379 |
| DraIII | CACNNNGTG | 1 cut(s) | 3243 |
| EaeI | YGGCCR | 1 cut(s) | 2838 |
| Eam1104I | CTCTTC | 8 cut(s) | 159, 203, 522, 834, 1056, 1075, 2522, 3141 |
| EarI | CTCTTC | 8 cut(s) | 159, 203, 522, 834, 1056, 1075, 2522, 3141 |
| EciI | GGCGGA | 1 cut(s) | 1521 |
| Eco130I | CCWWGG | 2 cut(s) | 2329, 2462 |
| Eco24I | GRGCYC | 1 cut(s) | 348 |
| Eco31I | GGTCTC | 1 cut(s) | 1416 |
| Eco32I | GATATC | 1 cut(s) | 1396 |
| Eco47I | GGWCC | 2 cut(s) | 898, 2272 |
| Eco57I | CTGAAG | 3 cut(s) | 24, 1650, 3003 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 706, 2550 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2272, 3290 |
| EcoRI | GAATTC | 1 cut(s) | 2111 |
| EcoRII | CCWGG | 5 cut(s) | 93, 949, 2683, 2944, 2971 |
| EcoRV | GATATC | 1 cut(s) | 1396 |
| EcoT14I | CCWWGG | 2 cut(s) | 2329, 2462 |
| EcoT22I | ATGCAT | 3 cut(s) | 834, 1110, 1449 |
| EcoT38I | GRGCYC | 1 cut(s) | 348 |
| ErhI | CCWWGG | 2 cut(s) | 2329, 2462 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 153, 185, 2161, 2193 |
| FaqI | GGGAC | 3 cut(s) | 2170, 2458, 2485 |
| FauI | CCCGC | 1 cut(s) | 653 |
| FbaI | TGATCA | 2 cut(s) | 130, 1189 |
| FblI | GTMKAC | 2 cut(s) | 2173, 3030 |
| Fnu4HI | GCNGC | 5 cut(s) | 447, 1289, 1572, 1810, 2737 |
| FriOI | GRGCYC | 1 cut(s) | 348 |
| Fsp4HI | GCNGC | 5 cut(s) | 447, 1289, 1572, 1810, 2737 |
| GlaI | GCGC | 2 cut(s) | 92, 3159 |
| GluI | GCNGC | 5 cut(s) | 447, 1289, 1572, 1810, 2737 |
| GsaI | CCCAGC | 1 cut(s) | 1069 |
| GsuI | CTGGAG | 1 cut(s) | 3024 |
| HaeIII | GGCC | 2 cut(s) | 2840, 3292 |
| HapII | CCGG | 5 cut(s) | 503, 1503, 1775, 2295, 2841 |
| HhaI | GCGC | 2 cut(s) | 93, 3160 |
| Hin6I | GCGC | 2 cut(s) | 91, 3158 |
| HinP1I | GCGC | 2 cut(s) | 91, 3158 |
| HincII | GTYRAC | 1 cut(s) | 1487 |
| HindII | GTYRAC | 1 cut(s) | 1487 |
| HindIII | AAGCTT | 5 cut(s) | 1071, 1781, 2708, 2741, 3229 |
| HpaII | CCGG | 5 cut(s) | 503, 1503, 1775, 2295, 2841 |
| HphI | GGTGA | 5 cut(s) | 95, 1109, 1253, 1958, 2960 |
| Hpy166II | GTNNAC | 6 cut(s) | 480, 898, 1487, 1681, 2174, 3031 |
| Hpy8I | GTNNAC | 6 cut(s) | 480, 898, 1487, 1681, 2174, 3031 |
| Hpy99I | CGWCG | 1 cut(s) | 265 |
| HpyAV | CCTTC | 8 cut(s) | 395, 421, 1695, 2045, 2187, 2263, 2414, 2690 |
| HpyCH4III | ACNGT | 3 cut(s) | 216, 2941, 3254 |
| HpyCH4IV | ACGT | 4 cut(s) | 263, 547, 1120, 1510 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 314, 698, 1512, 1669, 1678, 2707, 3080 |
| HpySE526I | ACGT | 4 cut(s) | 263, 547, 1120, 1510 |
| HspAI | GCGC | 2 cut(s) | 91, 3158 |
| Kpn2I | TCCGGA | 1 cut(s) | 2294 |
| Ksp22I | TGATCA | 2 cut(s) | 130, 1189 |
| LguI | GCTCTTC | 2 cut(s) | 159, 1056 |
| LmnI | GCTCC | 5 cut(s) | 314, 343, 562, 2606, 2928 |
| Lsp1109I | GCAGC | 5 cut(s) | 433, 1300, 1583, 1821, 2748 |
| LweI | GCATC | 7 cut(s) | 14, 1014, 1036, 1117, 1934, 2288, 2808 |
| MaeII | ACGT | 4 cut(s) | 263, 547, 1120, 1510 |
| MaeIII | GTNAC | 4 cut(s) | 11, 460, 2585, 3361 |
| MfeI | CAATTG | 3 cut(s) | 207, 365, 1366 |
| MflI | RGATCY | 6 cut(s) | 43, 494, 711, 1911, 1933, 2128 |
| MhlI | GDGCHC | 4 cut(s) | 348, 510, 1683, 2611 |
| MlyI | GAGTC | 4 cut(s) | 599, 1205, 2032, 2251 |
| MmeI | TCCRAC | 3 cut(s) | 337, 540, 562 |
| Mph1103I | ATGCAT | 3 cut(s) | 834, 1110, 1449 |
| MroI | TCCGGA | 1 cut(s) | 2294 |
| MroXI | GAANNNNTTC | 1 cut(s) | 168 |
| MslI | CAYNNNNRTG | 3 cut(s) | 114, 233, 1185 |
| MspA1I | CMGCKG | 1 cut(s) | 3375 |
| MspCI | CTTAAG | 2 cut(s) | 2656, 2725 |
| MspI | CCGG | 5 cut(s) | 503, 1503, 1775, 2295, 2841 |
| MspR9I | CCNGG | 7 cut(s) | 95, 951, 1503, 2685, 2842, 2946, 2973 |
| MunI | CAATTG | 3 cut(s) | 207, 365, 1366 |
| Mva1269I | GAATGC | 1 cut(s) | 386 |
| MvaI | CCWGG | 5 cut(s) | 95, 951, 2685, 2946, 2973 |
| MvnI | CGCG | 1 cut(s) | 91 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 314, 698, 1512, 1669, 1678, 2707, 3080 |
| NciI | CCSGG | 2 cut(s) | 1503, 2842 |
| NcoI | CCATGG | 1 cut(s) | 2462 |
| NheI | GCTAGC | 1 cut(s) | 2308 |
| NlaIV | GGNNCC | 4 cut(s) | 269, 345, 564, 2943 |
| NmuCI | GTSAC | 2 cut(s) | 460, 3361 |
| NsiI | ATGCAT | 3 cut(s) | 834, 1110, 1449 |
| NspI | RCATGY | 5 cut(s) | 832, 1002, 1320, 1648, 1852 |
| NspV | TTCGAA | 2 cut(s) | 172, 1770 |
| PagI | TCATGA | 1 cut(s) | 801 |
| PciI | ACATGT | 1 cut(s) | 1848 |
| PciSI | GCTCTTC | 2 cut(s) | 159, 1056 |
| PctI | GAATGC | 1 cut(s) | 386 |
| PdmI | GAANNNNTTC | 1 cut(s) | 168 |
| PfeI | GAWTC | 8 cut(s) | 138, 289, 611, 960, 1604, 2005, 2068, 2104 |
| PfoI | TCCNGGA | 2 cut(s) | 2683, 2971 |
| PkrI | GCNGC | 5 cut(s) | 448, 1290, 1573, 1811, 2738 |
| PleI | GAGTC | 4 cut(s) | 598, 1204, 2031, 2250 |
| PpsI | GAGTC | 4 cut(s) | 598, 1204, 2031, 2250 |
| PpuMI | RGGWCCY | 1 cut(s) | 2272 |
| PscI | ACATGT | 1 cut(s) | 1848 |
| Psp1406I | AACGTT | 1 cut(s) | 1120 |
| Psp5II | RGGWCCY | 1 cut(s) | 2272 |
| Psp6I | CCWGG | 5 cut(s) | 93, 949, 2683, 2944, 2971 |
| PspFI | CCCAGC | 1 cut(s) | 1065 |
| PspGI | CCWGG | 5 cut(s) | 93, 949, 2683, 2944, 2971 |
| PspN4I | GGNNCC | 4 cut(s) | 269, 345, 564, 2943 |
| PspPI | GGNCC | 3 cut(s) | 898, 2272, 3290 |
| PspPPI | RGGWCCY | 1 cut(s) | 2272 |
| PstI | CTGCAG | 1 cut(s) | 571 |
| PstNI | CAGNNNCTG | 1 cut(s) | 47 |
| PsuI | RGATCY | 6 cut(s) | 43, 494, 711, 1911, 1933, 2128 |
| PvuII | CAGCTG | 1 cut(s) | 3375 |
| RsaI | GTAC | 8 cut(s) | 435, 534, 546, 718, 1350, 2254, 2723, 3152 |
| RsaNI | GTAC | 8 cut(s) | 434, 533, 545, 717, 1349, 2253, 2722, 3151 |
| RseI | CAYNNNNRTG | 3 cut(s) | 114, 233, 1185 |
| SapI | GCTCTTC | 2 cut(s) | 159, 1056 |
| SatI | GCNGC | 5 cut(s) | 447, 1289, 1572, 1810, 2737 |
| Sau96I | GGNCC | 3 cut(s) | 898, 2272, 3290 |
| SchI | GAGTC | 4 cut(s) | 599, 1205, 2032, 2251 |
| ScrFI | CCNGG | 7 cut(s) | 95, 951, 1503, 2685, 2842, 2946, 2973 |
| SduI | GDGCHC | 4 cut(s) | 348, 510, 1683, 2611 |
| SfaNI | GCATC | 7 cut(s) | 14, 1014, 1036, 1117, 1934, 2288, 2808 |
| SfcI | CTRYAG | 2 cut(s) | 567, 703 |
| SfuI | TTCGAA | 2 cut(s) | 172, 1770 |
| SinI | GGWCC | 2 cut(s) | 898, 2272 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 114, 233, 1185 |
| SmlI | CTYRAG | 8 cut(s) | 743, 1494, 1937, 1994, 2063, 2656, 2711, 2725 |
| SmoI | CTYRAG | 8 cut(s) | 743, 1494, 1937, 1994, 2063, 2656, 2711, 2725 |
| SpeI | ACTAGT | 2 cut(s) | 3265, 3358 |
| SsiI | CCGC | 4 cut(s) | 660, 1091, 1506, 2661 |
| StyD4I | CCNGG | 7 cut(s) | 93, 949, 1501, 2683, 2840, 2944, 2971 |
| StyI | CCWWGG | 2 cut(s) | 2329, 2462 |
| TaaI | ACNGT | 3 cut(s) | 216, 2941, 3254 |
| TaiI | ACGT | 4 cut(s) | 266, 550, 1123, 1513 |
| TaqI | TCGA | 9 cut(s) | 172, 260, 888, 1054, 1728, 1770, 2115, 2485, 2512 |
| TatI | WGTACW | 2 cut(s) | 716, 2721 |
| TfiI | GAWTC | 8 cut(s) | 138, 289, 611, 960, 1604, 2005, 2068, 2104 |
| TscAI | CASTG | 3 cut(s) | 2217, 3027, 3109 |
| TseFI | GTSAC | 2 cut(s) | 460, 3361 |
| TseI | GCWGC | 5 cut(s) | 446, 1288, 1571, 1809, 2736 |
| Tsp45I | GTSAC | 2 cut(s) | 460, 3361 |
| TspGWI | ACGGA | 1 cut(s) | 479 |
| TspRI | CASTG | 3 cut(s) | 2217, 3027, 3109 |
| Vha464I | CTTAAG | 2 cut(s) | 2656, 2725 |
| VneI | GTGCAC | 1 cut(s) | 1679 |
| VpaK11BI | GGWCC | 2 cut(s) | 898, 2272 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 706, 2550 |
| XbaI | TCTAGA | 1 cut(s) | 292 |
| XceI | RCATGY | 5 cut(s) | 832, 1002, 1320, 1648, 1852 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 623 |
| XmiI | GTMKAC | 2 cut(s) | 2173, 3030 |
| XmnI | GAANNNNTTC | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 3 cut(s) | 834, 1110, 1449 |