TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 198 | 1.5e-55 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 2.4e-15 | TIR domain |
| NB-ARC | PF00931 | 210 - 370 | 5.1e-22 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 509 | 1.3e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 725 - 825 | 5.4e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 767 - 961 | 4.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 864 - 949 | 1.1e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 1011 - 1155 | 2e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3355 |
| AccI | GTMKAC | 2 cut(s) | 1389, 1687 |
| AccIII | TCCGGA | 1 cut(s) | 190 |
| AciI | CCGC | 6 cut(s) | 91, 227, 652, 2983, 3315, 3594 |
| AclWI | GGATC | 6 cut(s) | 338, 351, 933, 2764, 2777, 2870 |
| AcuI | CTGAAG | 6 cut(s) | 58, 402, 1064, 1087, 2422, 2654 |
| AcyI | GRCGYC | 1 cut(s) | 1608 |
| AdeI | CACNNNGTG | 1 cut(s) | 267 |
| AfeI | AGCGCT | 1 cut(s) | 2435 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1008, 2888, 3107 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AgeI | ACCGGT | 1 cut(s) | 32 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3169 |
| AhlI | ACTAGT | 1 cut(s) | 1018 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 4 cut(s) | 218, 1537, 1798, 3034 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 238, 270, 393, 425 |
| Alw21I | GWGCWC | 5 cut(s) | 14, 198, 1140, 3148, 3445 |
| Alw26I | GTCTC | 5 cut(s) | 352, 2020, 2075, 2282, 3072 |
| Alw44I | GTGCAC | 1 cut(s) | 3441 |
| AlwI | GGATC | 6 cut(s) | 338, 351, 933, 2764, 2777, 2870 |
| Aor13HI | TCCGGA | 1 cut(s) | 190 |
| Aor51HI | AGCGCT | 1 cut(s) | 2435 |
| AoxI | GGCC | 3 cut(s) | 3, 1729, 3435 |
| ApaI | GGGCCC | 1 cut(s) | 3439 |
| ApaLI | GTGCAC | 1 cut(s) | 3441 |
| ApeKI | GCWGC | 5 cut(s) | 372, 1696, 2121, 2328, 3498 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 590, 622 |
| AsiGI | ACCGGT | 1 cut(s) | 32 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 837, 1100, 1512, 2868 |
| AspLEI | GCGC | 1 cut(s) | 2436 |
| AspS9I | GGNCC | 6 cut(s) | 1197, 1730, 1929, 3187, 3435, 3436 |
| AsuC2I | CCSGG | 1 cut(s) | 1934 |
| AsuHPI | GGTGA | 5 cut(s) | 1015, 1847, 3275, 3284, 3433 |
| AsuII | TTCGAA | 1 cut(s) | 3381 |
| AvaII | GGWCC | 3 cut(s) | 1197, 1929, 3187 |
| BaeGI | GKGCMC | 2 cut(s) | 3439, 3445 |
| BamHI | GGATCC | 2 cut(s) | 343, 2769 |
| BanII | GRGCYC | 3 cut(s) | 198, 1140, 3439 |
| BauI | CACGAG | 2 cut(s) | 2929, 3507 |
| BbsI | GAAGAC | 5 cut(s) | 90, 1163, 2604, 2679, 3583 |
| Bbv12I | GWGCWC | 5 cut(s) | 14, 198, 1140, 3148, 3445 |
| BbvI | GCAGC | 5 cut(s) | 384, 1683, 2108, 2315, 3510 |
| BccI | CCATC | 9 cut(s) | 191, 667, 854, 1048, 1295, 1309, 2014, 2221, 3222 |
| BceAI | ACGGC | 1 cut(s) | 3161 |
| BciT130I | CCWGG | 4 cut(s) | 220, 1539, 1800, 3036 |
| BciVI | GTATCC | 2 cut(s) | 1788, 3230 |
| BclI | TGATCA | 1 cut(s) | 1852 |
| BcnI | CCSGG | 1 cut(s) | 1934 |
| BcoDI | GTCTC | 5 cut(s) | 352, 2020, 2075, 2282, 3072 |
| BcuI | ACTAGT | 1 cut(s) | 1018 |
| BfaI | CTAG | 8 cut(s) | 702, 788, 870, 908, 1019, 2459, 2955, 3344 |
| BfmI | CTRYAG | 6 cut(s) | 797, 1914, 2260, 2403, 3396, 3627 |
| BfoI | RGCGCY | 1 cut(s) | 2437 |
| BfuAI | ACCTGC | 1 cut(s) | 3355 |
| BfuI | GTATCC | 2 cut(s) | 1788, 3230 |
| BisI | GCNGC | 5 cut(s) | 373, 1697, 2122, 2329, 3499 |
| BlsI | GCNGC | 5 cut(s) | 374, 1698, 2123, 2330, 3500 |
| BmcAI | AGTACT | 1 cut(s) | 2699 |
| Bme1390I | CCNGG | 5 cut(s) | 220, 1539, 1800, 1934, 3036 |
| Bme18I | GGWCC | 3 cut(s) | 1197, 1929, 3187 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3169 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 6 cut(s) | 1197, 1730, 1929, 3187, 3435, 3436 |
| BmiI | GGNNCC | 9 cut(s) | 345, 1198, 1732, 1931, 2771, 2795, 3189, 3436, 3437 |
| BmrFI | CCNGG | 5 cut(s) | 220, 1539, 1800, 1934, 3036 |
| BmsI | GCATC | 6 cut(s) | 436, 559, 753, 1493, 1570, 3401 |
| BpiI | GAAGAC | 5 cut(s) | 90, 1163, 2604, 2679, 3583 |
| BpmI | CTGGAG | 2 cut(s) | 2865, 3011 |
| Bpu14I | TTCGAA | 1 cut(s) | 3381 |
| BpuEI | CTTGAG | 7 cut(s) | 28, 1774, 1942, 2006, 2186, 2317, 2492 |
| BpuMI | CCSGG | 1 cut(s) | 1934 |
| BsaBI | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BsaHI | GRCGYC | 1 cut(s) | 1608 |
| BsaJI | CCNNGG | 3 cut(s) | 47, 1027, 1932 |
| BsaWI | WCCGGW | 3 cut(s) | 32, 190, 1810 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3069, 3099 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1008, 2888, 3107 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse1I | ACTGG | 3 cut(s) | 971, 3021, 3128 |
| Bse3DI | GCAATG | 5 cut(s) | 1338, 1372, 2010, 2217, 2549 |
| Bse8I | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BseAI | TCCGGA | 1 cut(s) | 190 |
| BseBI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3036 |
| BseDI | CCNNGG | 3 cut(s) | 47, 1027, 1932 |
| BseJI | GATNNNNATC | 3 cut(s) | 924, 1659, 2208 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1008, 2888, 3107 |
| BseMI | GCAATG | 5 cut(s) | 1338, 1372, 2010, 2217, 2549 |
| BseMII | CTCAG | 5 cut(s) | 1134, 1425, 1473, 2662, 3104 |
| BseNI | ACTGG | 3 cut(s) | 971, 3021, 3128 |
| BseRI | GAGGAG | 2 cut(s) | 188, 2468 |
| BseSI | GKGCMC | 2 cut(s) | 3439, 3445 |
| BseXI | GCAGC | 5 cut(s) | 384, 1683, 2108, 2315, 3510 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 3 cut(s) | 5, 1731, 3437 |
| BshTI | ACCGGT | 1 cut(s) | 32 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 5 cut(s) | 14, 198, 1140, 3148, 3445 |
| BsiSI | CCGG | 5 cut(s) | 33, 191, 1118, 1811, 1934 |
| BslFI | GGGAC | 3 cut(s) | 167, 328, 2413 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1008, 2888, 3107 |
| BsmAI | GTCTC | 5 cut(s) | 352, 2020, 2075, 2282, 3072 |
| BsmFI | GGGAC | 3 cut(s) | 167, 328, 2413 |
| BsmI | GAATGC | 3 cut(s) | 302, 1102, 2742 |
| BsnI | GGCC | 3 cut(s) | 5, 1731, 3437 |
| Bsp119I | TTCGAA | 1 cut(s) | 3381 |
| Bsp120I | GGGCCC | 1 cut(s) | 3435 |
| Bsp1286I | GDGCHC | 6 cut(s) | 14, 198, 1140, 3148, 3439, 3445 |
| Bsp13I | TCCGGA | 1 cut(s) | 190 |
| Bsp1407I | TGTACA | 1 cut(s) | 3447 |
| Bsp143I | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| Bsp19I | CCATGG | 2 cut(s) | 47, 1027 |
| BspACI | CCGC | 6 cut(s) | 91, 227, 652, 2983, 3315, 3594 |
| BspANI | GGCC | 3 cut(s) | 5, 1731, 3437 |
| BspCNI | CTCAG | 5 cut(s) | 1135, 1426, 1472, 2661, 3103 |
| BspEI | TCCGGA | 1 cut(s) | 190 |
| BspLI | GGNNCC | 9 cut(s) | 345, 1198, 1732, 1931, 2771, 2795, 3189, 3436, 3437 |
| BspMAI | CTGCAG | 3 cut(s) | 2264, 2407, 3631 |
| BspMI | ACCTGC | 1 cut(s) | 3355 |
| BspPI | GGATC | 6 cut(s) | 338, 351, 933, 2764, 2777, 2870 |
| BspQI | GCTCTTC | 3 cut(s) | 1083, 1527, 3459 |
| BspT104I | TTCGAA | 1 cut(s) | 3381 |
| BsrDI | GCAATG | 5 cut(s) | 1338, 1372, 2010, 2217, 2549 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BsrGI | TGTACA | 1 cut(s) | 3447 |
| BsrI | ACTGG | 3 cut(s) | 971, 3021, 3128 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssECI | CCNNGG | 3 cut(s) | 47, 1027, 1932 |
| BssMI | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| BssNAI | GTATAC | 1 cut(s) | 1390 |
| BssNI | GRCGYC | 1 cut(s) | 1608 |
| BssSI | CACGAG | 2 cut(s) | 2929, 3507 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 1027 |
| Bst1107I | GTATAC | 1 cut(s) | 1390 |
| Bst2BI | CACGAG | 2 cut(s) | 2929, 3507 |
| Bst2UI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3036 |
| Bst4CI | ACNGT | 7 cut(s) | 537, 1394, 1965, 2642, 2938, 3242, 3447 |
| Bst6I | CTCTTC | 7 cut(s) | 396, 1083, 1527, 1641, 2615, 2820, 3459 |
| BstACI | GRCGYC | 1 cut(s) | 1608 |
| BstAUI | TGTACA | 1 cut(s) | 3447 |
| BstBI | TTCGAA | 1 cut(s) | 3381 |
| BstC8I | GCNNGC | 4 cut(s) | 272, 475, 531, 2740 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 1027 |
| BstH2I | RGCGCY | 1 cut(s) | 2437 |
| BstHHI | GCGC | 1 cut(s) | 2436 |
| BstKTI | GATC | 8 cut(s) | 346, 928, 1855, 2540, 2772, 2843, 2878, 3292 |
| BstMAI | GTCTC | 5 cut(s) | 352, 2020, 2075, 2282, 3072 |
| BstMBI | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 78, 470, 2758, 2925, 3143 |
| BstNI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3036 |
| BstNSI | RCATGY | 3 cut(s) | 1016, 1347, 3357 |
| BstSCI | CCNGG | 5 cut(s) | 218, 1537, 1798, 1932, 3034 |
| BstSFI | CTRYAG | 6 cut(s) | 797, 1914, 2260, 2403, 3396, 3627 |
| BstSLI | GKGCMC | 2 cut(s) | 3439, 3445 |
| BstV1I | GCAGC | 5 cut(s) | 384, 1683, 2108, 2315, 3510 |
| BstV2I | GAAGAC | 5 cut(s) | 90, 1163, 2604, 2679, 3583 |
| BstX2I | RGATCY | 3 cut(s) | 343, 2769, 2875 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2541 |
| BstYI | RGATCY | 3 cut(s) | 343, 2769, 2875 |
| BstZ17I | GTATAC | 1 cut(s) | 1390 |
| BsuI | GTATCC | 2 cut(s) | 1788, 3230 |
| BsuRI | GGCC | 3 cut(s) | 5, 1731, 3437 |
| BtgI | CCRYGG | 2 cut(s) | 47, 1027 |
| BtgZI | GCGATG | 1 cut(s) | 1547 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsI | GCAGTG | 2 cut(s) | 134, 201 |
| BtsIMutI | CAGTG | 7 cut(s) | 134, 201, 533, 2446, 2656, 2979, 3443 |
| BveI | ACCTGC | 1 cut(s) | 3355 |
| Cac8I | GCNNGC | 4 cut(s) | 272, 475, 531, 2740 |
| CfoI | GCGC | 1 cut(s) | 2436 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 6 cut(s) | 1197, 1730, 1929, 3187, 3435, 3436 |
| CseI | GACGC | 3 cut(s) | 608, 1554, 1616 |
| CsiI | ACCWGGT | 1 cut(s) | 1798 |
| CspAI | ACCGGT | 1 cut(s) | 32 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| DpnI | GATC | 8 cut(s) | 345, 927, 1854, 2539, 2771, 2842, 2877, 3291 |
| DpnII | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| DraI | TTTAAA | 1 cut(s) | 1716 |
| DraIII | CACNNNGTG | 1 cut(s) | 267 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3169 |
| Eam1104I | CTCTTC | 7 cut(s) | 396, 1083, 1527, 1641, 2615, 2820, 3459 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3169 |
| EarI | CTCTTC | 7 cut(s) | 396, 1083, 1527, 1641, 2615, 2820, 3459 |
| Ecl136II | GAGCTC | 2 cut(s) | 196, 1138 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 1027 |
| Eco24I | GRGCYC | 3 cut(s) | 198, 1140, 3439 |
| Eco47I | GGWCC | 3 cut(s) | 1197, 1929, 3187 |
| Eco47III | AGCGCT | 1 cut(s) | 2435 |
| Eco53kI | GAGCTC | 2 cut(s) | 196, 1138 |
| Eco57I | CTGAAG | 6 cut(s) | 58, 402, 1064, 1087, 2422, 2654 |
| EcoICRI | GAGCTC | 2 cut(s) | 196, 1138 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1197, 1929, 3187, 3435 |
| EcoRII | CCWGG | 4 cut(s) | 218, 1537, 1798, 3034 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 1027 |
| EcoT22I | ATGCAT | 3 cut(s) | 302, 1482, 3416 |
| EcoT38I | GRGCYC | 3 cut(s) | 198, 1140, 3439 |
| ErhI | CCWWGG | 2 cut(s) | 47, 1027 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 393, 425, 888, 920, 3362, 3394 |
| FaqI | GGGAC | 3 cut(s) | 167, 328, 2413 |
| FauI | CCCGC | 1 cut(s) | 98 |
| FauNDI | CATATG | 2 cut(s) | 1045, 3547 |
| FbaI | TGATCA | 1 cut(s) | 1852 |
| FblI | GTMKAC | 2 cut(s) | 1389, 1687 |
| Fnu4HI | GCNGC | 5 cut(s) | 373, 1697, 2122, 2329, 3499 |
| FriOI | GRGCYC | 3 cut(s) | 198, 1140, 3439 |
| Fsp4HI | GCNGC | 5 cut(s) | 373, 1697, 2122, 2329, 3499 |
| FspBI | CTAG | 8 cut(s) | 702, 788, 870, 908, 1019, 2459, 2955, 3344 |
| GlaI | GCGC | 1 cut(s) | 2435 |
| GluI | GCNGC | 5 cut(s) | 373, 1697, 2122, 2329, 3499 |
| GsuI | CTGGAG | 2 cut(s) | 2865, 3011 |
| HaeII | RGCGCY | 1 cut(s) | 2437 |
| HaeIII | GGCC | 3 cut(s) | 5, 1731, 3437 |
| HapII | CCGG | 5 cut(s) | 33, 191, 1118, 1811, 1934 |
| HgaI | GACGC | 3 cut(s) | 608, 1554, 1616 |
| HhaI | GCGC | 1 cut(s) | 2436 |
| Hin1I | GRCGYC | 1 cut(s) | 1608 |
| Hin6I | GCGC | 1 cut(s) | 2434 |
| HinP1I | GCGC | 1 cut(s) | 2434 |
| HindIII | AAGCTT | 4 cut(s) | 407, 1718, 2384, 2759 |
| HpaII | CCGG | 5 cut(s) | 33, 191, 1118, 1811, 1934 |
| HphI | GGTGA | 5 cut(s) | 1015, 1847, 3275, 3284, 3433 |
| Hpy166II | GTNNAC | 4 cut(s) | 1390, 1544, 1688, 3443 |
| Hpy8I | GTNNAC | 4 cut(s) | 1390, 1544, 1688, 3443 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 3617 |
| HpyCH4III | ACNGT | 7 cut(s) | 537, 1394, 1965, 2642, 2938, 3242, 3447 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 78, 470, 2758, 2925, 3143 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92I | GRCGYC | 1 cut(s) | 1608 |
| HspAI | GCGC | 1 cut(s) | 2434 |
| Kpn2I | TCCGGA | 1 cut(s) | 190 |
| Ksp22I | TGATCA | 1 cut(s) | 1852 |
| Kzo9I | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| LguI | GCTCTTC | 3 cut(s) | 1083, 1527, 3459 |
| LmnI | GCTCC | 7 cut(s) | 193, 201, 540, 2455, 2501, 2559, 2799 |
| Lsp1109I | GCAGC | 5 cut(s) | 384, 1683, 2108, 2315, 3510 |
| LweI | GCATC | 6 cut(s) | 436, 559, 753, 1493, 1570, 3401 |
| MabI | ACCWGGT | 1 cut(s) | 1798 |
| MaeI | CTAG | 8 cut(s) | 702, 788, 870, 908, 1019, 2459, 2955, 3344 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MaeIII | GTNAC | 6 cut(s) | 1021, 1907, 2476, 3085, 3263, 3509 |
| MalI | GATC | 8 cut(s) | 345, 927, 1854, 2539, 2771, 2842, 2877, 3291 |
| MboI | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| MfeI | CAATTG | 4 cut(s) | 2427, 2801, 2923, 3279 |
| MflI | RGATCY | 3 cut(s) | 343, 2769, 2875 |
| MhlI | GDGCHC | 6 cut(s) | 14, 198, 1140, 3148, 3439, 3445 |
| MlyI | GAGTC | 5 cut(s) | 1532, 2229, 2284, 2590, 3074 |
| MmeI | TCCRAC | 2 cut(s) | 571, 2821 |
| Mph1103I | ATGCAT | 3 cut(s) | 302, 1482, 3416 |
| MroI | TCCGGA | 1 cut(s) | 190 |
| MroXI | GAANNNNTTC | 4 cut(s) | 837, 1100, 1512, 2868 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3419 |
| MspA1I | CMGCKG | 1 cut(s) | 1084 |
| MspI | CCGG | 5 cut(s) | 33, 191, 1118, 1811, 1934 |
| MspR9I | CCNGG | 5 cut(s) | 220, 1539, 1800, 1934, 3036 |
| MunI | CAATTG | 4 cut(s) | 2427, 2801, 2923, 3279 |
| Mva1269I | GAATGC | 3 cut(s) | 302, 1102, 2742 |
| MvaI | CCWGG | 4 cut(s) | 220, 1539, 1800, 3036 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 78, 470, 2758, 2925, 3143 |
| NciI | CCSGG | 1 cut(s) | 1934 |
| NcoI | CCATGG | 2 cut(s) | 47, 1027 |
| NdeI | CATATG | 2 cut(s) | 1045, 3547 |
| NdeII | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| NlaIV | GGNNCC | 9 cut(s) | 345, 1198, 1732, 1931, 2771, 2795, 3189, 3436, 3437 |
| NmuCI | GTSAC | 3 cut(s) | 1021, 3263, 3509 |
| NsiI | ATGCAT | 3 cut(s) | 302, 1482, 3416 |
| NspI | RCATGY | 3 cut(s) | 1016, 1347, 3357 |
| NspV | TTCGAA | 1 cut(s) | 3381 |
| PciSI | GCTCTTC | 3 cut(s) | 1083, 1527, 3459 |
| PctI | GAATGC | 3 cut(s) | 302, 1102, 2742 |
| PdmI | GAANNNNTTC | 4 cut(s) | 837, 1100, 1512, 2868 |
| PflFI | GACNNNGTC | 1 cut(s) | 1548 |
| PfoI | TCCNGGA | 1 cut(s) | 3034 |
| PinAI | ACCGGT | 1 cut(s) | 32 |
| PkrI | GCNGC | 5 cut(s) | 374, 1698, 2123, 2330, 3500 |
| PleI | GAGTC | 5 cut(s) | 1531, 2229, 2283, 2589, 3074 |
| PpsI | GAGTC | 5 cut(s) | 1531, 2229, 2283, 2589, 3074 |
| PpuMI | RGGWCCY | 3 cut(s) | 1197, 1929, 3187 |
| Psp124BI | GAGCTC | 2 cut(s) | 198, 1140 |
| Psp5II | RGGWCCY | 3 cut(s) | 1197, 1929, 3187 |
| Psp6I | CCWGG | 4 cut(s) | 218, 1537, 1798, 3034 |
| PspGI | CCWGG | 4 cut(s) | 218, 1537, 1798, 3034 |
| PspN4I | GGNNCC | 9 cut(s) | 345, 1198, 1732, 1931, 2771, 2795, 3189, 3436, 3437 |
| PspOMI | GGGCCC | 1 cut(s) | 3435 |
| PspPI | GGNCC | 6 cut(s) | 1197, 1730, 1929, 3187, 3435, 3436 |
| PspPPI | RGGWCCY | 3 cut(s) | 1197, 1929, 3187 |
| PstI | CTGCAG | 3 cut(s) | 2264, 2407, 3631 |
| PsuI | RGATCY | 3 cut(s) | 343, 2769, 2875 |
| PsyI | GACNNNGTC | 1 cut(s) | 1548 |
| PvuII | CAGCTG | 1 cut(s) | 1084 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3419 |
| SacI | GAGCTC | 2 cut(s) | 198, 1140 |
| SapI | GCTCTTC | 3 cut(s) | 1083, 1527, 3459 |
| SatI | GCNGC | 5 cut(s) | 373, 1697, 2122, 2329, 3499 |
| Sau3AI | GATC | 8 cut(s) | 343, 925, 1852, 2537, 2769, 2840, 2875, 3289 |
| Sau96I | GGNCC | 6 cut(s) | 1197, 1730, 1929, 3187, 3435, 3436 |
| ScaI | AGTACT | 1 cut(s) | 2699 |
| SchI | GAGTC | 5 cut(s) | 1532, 2229, 2284, 2590, 3074 |
| ScrFI | CCNGG | 5 cut(s) | 220, 1539, 1800, 1934, 3036 |
| SduI | GDGCHC | 6 cut(s) | 14, 198, 1140, 3148, 3439, 3445 |
| SexAI | ACCWGGT | 1 cut(s) | 1798 |
| SfaNI | GCATC | 6 cut(s) | 436, 559, 753, 1493, 1570, 3401 |
| SfcI | CTRYAG | 6 cut(s) | 797, 1914, 2260, 2403, 3396, 3627 |
| SfuI | TTCGAA | 1 cut(s) | 3381 |
| SinI | GGWCC | 3 cut(s) | 1197, 1929, 3187 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3419 |
| SmlI | CTYRAG | 7 cut(s) | 7, 1753, 1921, 2021, 2165, 2332, 2507 |
| SmoI | CTYRAG | 7 cut(s) | 7, 1753, 1921, 2021, 2165, 2332, 2507 |
| SpeI | ACTAGT | 1 cut(s) | 1018 |
| SsiI | CCGC | 6 cut(s) | 91, 227, 652, 2983, 3315, 3594 |
| SspI | AATATT | 2 cut(s) | 1849, 3620 |
| SspMI | CTAG | 8 cut(s) | 702, 788, 870, 908, 1019, 2459, 2955, 3344 |
| SstI | GAGCTC | 2 cut(s) | 198, 1140 |
| StyD4I | CCNGG | 5 cut(s) | 218, 1537, 1798, 1932, 3034 |
| StyI | CCWWGG | 2 cut(s) | 47, 1027 |
| TaaI | ACNGT | 7 cut(s) | 537, 1394, 1965, 2642, 2938, 3242, 3447 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 4 cut(s) | 210, 390, 3226, 3381 |
| TaqII | GACCGA | 1 cut(s) | 773 |
| TatI | WGTACW | 5 cut(s) | 1015, 1359, 2697, 2852, 3447 |
| TscAI | CASTG | 7 cut(s) | 134, 208, 540, 2446, 2656, 2979, 3450 |
| TseFI | GTSAC | 3 cut(s) | 1021, 3263, 3509 |
| TseI | GCWGC | 5 cut(s) | 372, 1696, 2121, 2328, 3498 |
| Tsp45I | GTSAC | 3 cut(s) | 1021, 3263, 3509 |
| TspGWI | ACGGA | 1 cut(s) | 3159 |
| TspRI | CASTG | 7 cut(s) | 134, 208, 540, 2446, 2656, 2979, 3450 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1548 |
| VneI | GTGCAC | 1 cut(s) | 3441 |
| VpaK11BI | GGWCC | 3 cut(s) | 1197, 1929, 3187 |
| XbaI | TCTAGA | 1 cut(s) | 3343 |
| XceI | RCATGY | 3 cut(s) | 1016, 1347, 3357 |
| XmiI | GTMKAC | 2 cut(s) | 1389, 1687 |
| XmnI | GAANNNNTTC | 4 cut(s) | 837, 1100, 1512, 2868 |
| XspI | CTAG | 8 cut(s) | 702, 788, 870, 908, 1019, 2459, 2955, 3344 |
| ZrmI | AGTACT | 1 cut(s) | 2699 |
| Zsp2I | ATGCAT | 3 cut(s) | 302, 1482, 3416 |