TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 183 | 1e-51 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 7.9e-15 | TIR domain |
| NB-ARC | PF00931 | 206 - 367 | 1.7e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 435 - 505 | 1.1e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 705 - 785 | 3.7e-10 | Leucine-rich repeat region |
| C-JID | PF20160 | 925 - 1058 | 6.6e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1563 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1486 |
| AccII | CGCG | 1 cut(s) | 2879 |
| AciI | CCGC | 2 cut(s) | 496, 1389 |
| AclI | AACGTT | 2 cut(s) | 753, 2336 |
| AclWI | GGATC | 3 cut(s) | 338, 1195, 1425 |
| AcsI | RAATTY | 8 cut(s) | 481, 731, 1263, 1672, 1779, 2602, 2759, 3098 |
| AcuI | CTGAAG | 3 cut(s) | 1055, 1539, 2684 |
| AcvI | CACGTG | 1 cut(s) | 1570 |
| AcyI | GRCGYC | 1 cut(s) | 1560 |
| AdeI | CACNNNGTG | 2 cut(s) | 477, 2537 |
| AfaI | GTAC | 7 cut(s) | 7, 30, 237, 500, 2402, 2507, 2901 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1486 |
| AflIII | ACRYGT | 1 cut(s) | 1854 |
| AjnI | CCWGG | 9 cut(s) | 89, 579, 1217, 1525, 1614, 1632, 2776, 3121, 3202 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 940, 972, 3299, 3331 |
| Alw26I | GTCTC | 1 cut(s) | 821 |
| AlwI | GGATC | 3 cut(s) | 338, 1195, 1425 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3218 |
| AoxI | GGCC | 5 cut(s) | 1750, 2653, 3025, 3118, 3193 |
| ApeKI | GCWGC | 5 cut(s) | 738, 1708, 2323, 2499, 3212 |
| ApoI | RAATTY | 8 cut(s) | 481, 731, 1263, 1672, 1779, 2602, 2759, 3098 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2803, 2835 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 592, 609, 1068, 1319, 1500, 2687 |
| AspLEI | GCGC | 1 cut(s) | 1536 |
| AspS9I | GGNCC | 4 cut(s) | 1618, 2819, 3119, 3193 |
| AsuC2I | CCSGG | 2 cut(s) | 2451, 3000 |
| AsuHPI | GGTGA | 7 cut(s) | 644, 832, 2523, 2656, 2904, 3035, 3218 |
| AsuII | TTCGAA | 1 cut(s) | 923 |
| AvaII | GGWCC | 2 cut(s) | 1618, 2819 |
| BauI | CACGAG | 2 cut(s) | 597, 2535 |
| BbrPI | CACGTG | 1 cut(s) | 1570 |
| BbsI | GAAGAC | 5 cut(s) | 1154, 2081, 2178, 2243, 3087 |
| BbvCI | CCTCAGC | 1 cut(s) | 1925 |
| BbvI | GCAGC | 5 cut(s) | 750, 1695, 2335, 2486, 3224 |
| BccI | CCATC | 9 cut(s) | 661, 1286, 1825, 1879, 1925, 2276, 2863, 3000, 3110 |
| BceAI | ACGGC | 3 cut(s) | 167, 1765, 2640 |
| BciT130I | CCWGG | 9 cut(s) | 91, 581, 1219, 1527, 1616, 1634, 2778, 3123, 3204 |
| BciVI | GTATCC | 1 cut(s) | 807 |
| BclI | TGATCA | 4 cut(s) | 1624, 2725, 2746, 3040 |
| BcnI | CCSGG | 2 cut(s) | 2451, 3000 |
| BcoDI | GTCTC | 1 cut(s) | 821 |
| BfaI | CTAG | 6 cut(s) | 506, 810, 993, 1325, 1379, 3293 |
| BfmI | CTRYAG | 2 cut(s) | 2832, 3058 |
| BfuI | GTATCC | 1 cut(s) | 807 |
| BglII | AGATCT | 2 cut(s) | 508, 2836 |
| BisI | GCNGC | 6 cut(s) | 739, 1390, 1709, 2324, 2500, 3213 |
| BlsI | GCNGC | 6 cut(s) | 740, 1391, 1710, 2325, 2501, 3214 |
| BmcAI | AGTACT | 1 cut(s) | 2402 |
| Bme18I | GGWCC | 2 cut(s) | 1618, 2819 |
| BmgT120I | GGNCC | 4 cut(s) | 1618, 2819, 3119, 3193 |
| BmiI | GGNNCC | 3 cut(s) | 2820, 2990, 3194 |
| BmrI | ACTGGG | 1 cut(s) | 483 |
| BmsI | GCATC | 2 cut(s) | 263, 1455 |
| BmuI | ACTGGG | 1 cut(s) | 483 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1857 |
| BpiI | GAAGAC | 5 cut(s) | 1154, 2081, 2178, 2243, 3087 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2009, 2041 |
| BpmI | CTGGAG | 2 cut(s) | 174, 3165 |
| Bpu10I | CCTNAGC | 2 cut(s) | 132, 1925 |
| Bpu14I | TTCGAA | 1 cut(s) | 923 |
| BpuEI | CTTGAG | 5 cut(s) | 1733, 1775, 2086, 2498, 3278 |
| BpuMI | CCSGG | 2 cut(s) | 2451, 3000 |
| BsaAI | YACGTR | 1 cut(s) | 1570 |
| BsaBI | GATNNNNATC | 2 cut(s) | 342, 915 |
| BsaHI | GRCGYC | 1 cut(s) | 1560 |
| BsaJI | CCNNGG | 3 cut(s) | 2300, 2450, 3121 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1486 |
| Bse1I | ACTGG | 8 cut(s) | 326, 478, 497, 822, 1930, 2218, 2646, 3089 |
| Bse3DI | GCAATG | 4 cut(s) | 769, 1329, 2188, 2956 |
| Bse8I | GATNNNNATC | 2 cut(s) | 342, 915 |
| BseBI | CCWGG | 9 cut(s) | 91, 581, 1219, 1527, 1616, 1634, 2778, 3123, 3204 |
| BseDI | CCNNGG | 3 cut(s) | 2300, 2450, 3121 |
| BseJI | GATNNNNATC | 2 cut(s) | 342, 915 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1486 |
| BseMI | GCAATG | 4 cut(s) | 769, 1329, 2188, 2956 |
| BseMII | CTCAG | 6 cut(s) | 59, 146, 1565, 1798, 1939, 3316 |
| BseNI | ACTGG | 8 cut(s) | 326, 478, 497, 822, 1930, 2218, 2646, 3089 |
| BseRI | GAGGAG | 2 cut(s) | 2724, 2727 |
| BseXI | GCAGC | 5 cut(s) | 750, 1695, 2335, 2486, 3224 |
| BsgI | GTGCAG | 2 cut(s) | 806, 1181 |
| Bsh1236I | CGCG | 1 cut(s) | 2879 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3114 |
| BshFI | GGCC | 5 cut(s) | 1752, 2655, 3027, 3120, 3195 |
| BsiEI | CGRYCG | 1 cut(s) | 3114 |
| BsiSI | CCGG | 3 cut(s) | 2168, 2450, 3000 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1486 |
| BsmAI | GTCTC | 1 cut(s) | 821 |
| BsmI | GAATGC | 3 cut(s) | 302, 2244, 2554 |
| BsnI | GGCC | 5 cut(s) | 1752, 2655, 3027, 3120, 3195 |
| Bsp119I | TTCGAA | 1 cut(s) | 923 |
| Bsp19I | CCATGG | 1 cut(s) | 2300 |
| BspACI | CCGC | 2 cut(s) | 496, 1389 |
| BspANI | GGCC | 5 cut(s) | 1752, 2655, 3027, 3120, 3195 |
| BspCNI | CTCAG | 6 cut(s) | 60, 145, 1566, 1797, 1938, 3315 |
| BspFNI | CGCG | 1 cut(s) | 2879 |
| BspHI | TCATGA | 3 cut(s) | 847, 861, 3247 |
| BspLI | GGNNCC | 3 cut(s) | 2820, 2990, 3194 |
| BspPI | GGATC | 3 cut(s) | 338, 1195, 1425 |
| BspQI | GCTCTTC | 2 cut(s) | 1074, 1515 |
| BspT104I | TTCGAA | 1 cut(s) | 923 |
| BsrDI | GCAATG | 4 cut(s) | 769, 1329, 2188, 2956 |
| BsrI | ACTGG | 8 cut(s) | 326, 478, 497, 822, 1930, 2218, 2646, 3089 |
| BssECI | CCNNGG | 3 cut(s) | 2300, 2450, 3121 |
| BssNI | GRCGYC | 1 cut(s) | 1560 |
| BssSI | CACGAG | 2 cut(s) | 597, 2535 |
| BssT1I | CCWWGG | 1 cut(s) | 2300 |
| Bst2BI | CACGAG | 2 cut(s) | 597, 2535 |
| Bst2UI | CCWGG | 9 cut(s) | 91, 581, 1219, 1527, 1616, 1634, 2778, 3123, 3204 |
| Bst4CI | ACNGT | 6 cut(s) | 161, 319, 1364, 1907, 3034, 3220 |
| Bst6I | CTCTTC | 6 cut(s) | 25, 1074, 1198, 1346, 1515, 2253 |
| BstACI | GRCGYC | 1 cut(s) | 1560 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1474 |
| BstBAI | YACGTR | 1 cut(s) | 1570 |
| BstBI | TTCGAA | 1 cut(s) | 923 |
| BstC8I | GCNNGC | 1 cut(s) | 1532 |
| BstDSI | CCRYGG | 1 cut(s) | 2300 |
| BstFNI | CGCG | 1 cut(s) | 2879 |
| BstHHI | GCGC | 1 cut(s) | 1536 |
| BstMAI | GTCTC | 1 cut(s) | 821 |
| BstMCI | CGRYCG | 1 cut(s) | 3114 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1474, 1531, 1604, 2701, 2885, 2894 |
| BstNI | CCWGG | 9 cut(s) | 91, 581, 1219, 1527, 1616, 1634, 2778, 3123, 3204 |
| BstNSI | RCATGY | 2 cut(s) | 1338, 1858 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1857 |
| BstSFI | CTRYAG | 2 cut(s) | 2832, 3058 |
| BstUI | CGCG | 1 cut(s) | 2879 |
| BstV1I | GCAGC | 5 cut(s) | 750, 1695, 2335, 2486, 3224 |
| BstV2I | GAAGAC | 5 cut(s) | 1154, 2081, 2178, 2243, 3087 |
| BstX2I | RGATCY | 4 cut(s) | 508, 1187, 1430, 2836 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1615 |
| BstYI | RGATCY | 4 cut(s) | 508, 1187, 1430, 2836 |
| BsuI | GTATCC | 1 cut(s) | 807 |
| BsuRI | GGCC | 5 cut(s) | 1752, 2655, 3027, 3120, 3195 |
| BtgI | CCRYGG | 1 cut(s) | 2300 |
| BtsI | GCAGTG | 4 cut(s) | 537, 1605, 2107, 2501 |
| BtsIMutI | CAGTG | 6 cut(s) | 471, 537, 1605, 2037, 2107, 2501 |
| Cac8I | GCNNGC | 1 cut(s) | 1532 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3218 |
| CciI | TCATGA | 3 cut(s) | 847, 861, 3247 |
| CfoI | GCGC | 1 cut(s) | 1536 |
| Cfr13I | GGNCC | 4 cut(s) | 1618, 2819, 3119, 3193 |
| CseI | GACGC | 1 cut(s) | 1604 |
| CsiI | ACCWGGT | 1 cut(s) | 579 |
| Csp6I | GTAC | 7 cut(s) | 6, 29, 236, 499, 2401, 2506, 2900 |
| CviQI | GTAC | 7 cut(s) | 6, 29, 236, 499, 2401, 2506, 2900 |
| DraI | TTTAAA | 3 cut(s) | 1096, 1911, 1938 |
| DraIII | CACNNNGTG | 2 cut(s) | 477, 2537 |
| Eam1104I | CTCTTC | 6 cut(s) | 25, 1074, 1198, 1346, 1515, 2253 |
| EarI | CTCTTC | 6 cut(s) | 25, 1074, 1198, 1346, 1515, 2253 |
| Eco130I | CCWWGG | 1 cut(s) | 2300 |
| Eco47I | GGWCC | 2 cut(s) | 1618, 2819 |
| Eco57I | CTGAAG | 3 cut(s) | 1055, 1539, 2684 |
| Eco72I | CACGTG | 1 cut(s) | 1570 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2819, 3193 |
| EcoRI | GAATTC | 3 cut(s) | 731, 1672, 1779 |
| EcoRII | CCWGG | 9 cut(s) | 89, 579, 1217, 1525, 1614, 1632, 2776, 3121, 3202 |
| EcoT14I | CCWWGG | 1 cut(s) | 2300 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 302, 1470 |
| ErhI | CCWWGG | 1 cut(s) | 2300 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 36, 2038, 2070, 2118, 2150 |
| FauNDI | CATATG | 1 cut(s) | 55 |
| FbaI | TGATCA | 4 cut(s) | 1624, 2725, 2746, 3040 |
| Fnu4HI | GCNGC | 6 cut(s) | 739, 1390, 1709, 2324, 2500, 3213 |
| Fsp4HI | GCNGC | 6 cut(s) | 739, 1390, 1709, 2324, 2500, 3213 |
| FspBI | CTAG | 6 cut(s) | 506, 810, 993, 1325, 1379, 3293 |
| GlaI | GCGC | 1 cut(s) | 1535 |
| GluI | GCNGC | 6 cut(s) | 739, 1390, 1709, 2324, 2500, 3213 |
| GsuI | CTGGAG | 2 cut(s) | 174, 3165 |
| HaeIII | GGCC | 5 cut(s) | 1752, 2655, 3027, 3120, 3195 |
| HapII | CCGG | 3 cut(s) | 2168, 2450, 3000 |
| HgaI | GACGC | 1 cut(s) | 1604 |
| HhaI | GCGC | 1 cut(s) | 1536 |
| Hin1I | GRCGYC | 1 cut(s) | 1560 |
| Hin6I | GCGC | 1 cut(s) | 1534 |
| HinP1I | GCGC | 1 cut(s) | 1534 |
| HincII | GTYRAC | 2 cut(s) | 261, 2023 |
| HindII | GTYRAC | 2 cut(s) | 261, 2023 |
| HindIII | AAGCTT | 2 cut(s) | 2425, 2525 |
| HpaII | CCGG | 3 cut(s) | 2168, 2450, 3000 |
| HphI | GGTGA | 7 cut(s) | 644, 832, 2523, 2656, 2904, 3035, 3218 |
| Hpy166II | GTNNAC | 4 cut(s) | 164, 261, 2023, 3065 |
| Hpy8I | GTNNAC | 4 cut(s) | 164, 261, 2023, 3065 |
| HpyCH4III | ACNGT | 6 cut(s) | 161, 319, 1364, 1907, 3034, 3220 |
| HpyCH4IV | ACGT | 4 cut(s) | 753, 1560, 1569, 2336 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1474, 1531, 1604, 2701, 2885, 2894 |
| HpySE526I | ACGT | 4 cut(s) | 753, 1560, 1569, 2336 |
| Hsp92I | GRCGYC | 1 cut(s) | 1560 |
| HspAI | GCGC | 1 cut(s) | 1534 |
| Ksp22I | TGATCA | 4 cut(s) | 1624, 2725, 2746, 3040 |
| LguI | GCTCTTC | 2 cut(s) | 1074, 1515 |
| LmnI | GCTCC | 2 cut(s) | 854, 1482 |
| Lsp1109I | GCAGC | 5 cut(s) | 750, 1695, 2335, 2486, 3224 |
| LweI | GCATC | 2 cut(s) | 263, 1455 |
| MabI | ACCWGGT | 1 cut(s) | 579 |
| MaeI | CTAG | 6 cut(s) | 506, 810, 993, 1325, 1379, 3293 |
| MaeII | ACGT | 4 cut(s) | 753, 1560, 1569, 2336 |
| MaeIII | GTNAC | 8 cut(s) | 789, 881, 1253, 1773, 2209, 2348, 2657, 2827 |
| MfeI | CAATTG | 2 cut(s) | 207, 929 |
| MflI | RGATCY | 4 cut(s) | 508, 1187, 1430, 2836 |
| MlyI | GAGTC | 3 cut(s) | 929, 2018, 2350 |
| MmeI | TCCRAC | 2 cut(s) | 565, 2550 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 302, 1470 |
| MroXI | GAANNNNTTC | 6 cut(s) | 592, 609, 1068, 1319, 1500, 2687 |
| MslI | CAYNNNNRTG | 2 cut(s) | 3075, 3168 |
| MspI | CCGG | 3 cut(s) | 2168, 2450, 3000 |
| MunI | CAATTG | 2 cut(s) | 207, 929 |
| Mva1269I | GAATGC | 3 cut(s) | 302, 2244, 2554 |
| MvaI | CCWGG | 9 cut(s) | 91, 581, 1219, 1527, 1616, 1634, 2778, 3123, 3204 |
| MvnI | CGCG | 1 cut(s) | 2879 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1474, 1531, 1604, 2701, 2885, 2894 |
| NciI | CCSGG | 2 cut(s) | 2451, 3000 |
| NcoI | CCATGG | 1 cut(s) | 2300 |
| NdeI | CATATG | 1 cut(s) | 55 |
| NlaIV | GGNNCC | 3 cut(s) | 2820, 2990, 3194 |
| NmeAIII | GCCGAG | 1 cut(s) | 1532 |
| NmuCI | GTSAC | 2 cut(s) | 881, 2209 |
| NsiI | ATGCAT | 3 cut(s) | 256, 302, 1470 |
| NspI | RCATGY | 2 cut(s) | 1338, 1858 |
| NspV | TTCGAA | 1 cut(s) | 923 |
| PagI | TCATGA | 3 cut(s) | 847, 861, 3247 |
| PciI | ACATGT | 1 cut(s) | 1854 |
| PciSI | GCTCTTC | 2 cut(s) | 1074, 1515 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1566 |
| PctI | GAATGC | 3 cut(s) | 302, 2244, 2554 |
| PdmI | GAANNNNTTC | 6 cut(s) | 592, 609, 1068, 1319, 1500, 2687 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1486 |
| PfoI | TCCNGGA | 4 cut(s) | 1217, 1614, 1632, 2776 |
| PkrI | GCNGC | 6 cut(s) | 740, 1391, 1710, 2325, 2501, 3214 |
| PleI | GAGTC | 3 cut(s) | 929, 2018, 2349 |
| PmaCI | CACGTG | 1 cut(s) | 1570 |
| PmlI | CACGTG | 1 cut(s) | 1570 |
| PpsI | GAGTC | 3 cut(s) | 929, 2018, 2349 |
| Ppu21I | YACGTR | 1 cut(s) | 1570 |
| PpuMI | RGGWCCY | 1 cut(s) | 2819 |
| PscI | ACATGT | 1 cut(s) | 1854 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1857 |
| Psp1406I | AACGTT | 2 cut(s) | 753, 2336 |
| Psp5II | RGGWCCY | 1 cut(s) | 2819 |
| Psp6I | CCWGG | 9 cut(s) | 89, 579, 1217, 1525, 1614, 1632, 2776, 3121, 3202 |
| PspCI | CACGTG | 1 cut(s) | 1570 |
| PspGI | CCWGG | 9 cut(s) | 89, 579, 1217, 1525, 1614, 1632, 2776, 3121, 3202 |
| PspN4I | GGNNCC | 3 cut(s) | 2820, 2990, 3194 |
| PspPI | GGNCC | 4 cut(s) | 1618, 2819, 3119, 3193 |
| PspPPI | RGGWCCY | 1 cut(s) | 2819 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 594, 626, 828, 860 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3218 |
| PsuI | RGATCY | 4 cut(s) | 508, 1187, 1430, 2836 |
| RsaI | GTAC | 7 cut(s) | 7, 30, 237, 500, 2402, 2507, 2901 |
| RsaNI | GTAC | 7 cut(s) | 6, 29, 236, 499, 2401, 2506, 2900 |
| RseI | CAYNNNNRTG | 2 cut(s) | 3075, 3168 |
| SapI | GCTCTTC | 2 cut(s) | 1074, 1515 |
| SatI | GCNGC | 6 cut(s) | 739, 1390, 1709, 2324, 2500, 3213 |
| Sau96I | GGNCC | 4 cut(s) | 1618, 2819, 3119, 3193 |
| ScaI | AGTACT | 1 cut(s) | 2402 |
| SchI | GAGTC | 3 cut(s) | 929, 2018, 2350 |
| SexAI | ACCWGGT | 1 cut(s) | 579 |
| SfaNI | GCATC | 2 cut(s) | 263, 1455 |
| SfcI | CTRYAG | 2 cut(s) | 2832, 3058 |
| SfuI | TTCGAA | 1 cut(s) | 923 |
| SinI | GGWCC | 2 cut(s) | 1618, 2819 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 3075, 3168 |
| SmlI | CTYRAG | 5 cut(s) | 1712, 1754, 2065, 2477, 3257 |
| SmoI | CTYRAG | 5 cut(s) | 1712, 1754, 2065, 2477, 3257 |
| SsiI | CCGC | 2 cut(s) | 496, 1389 |
| SspMI | CTAG | 6 cut(s) | 506, 810, 993, 1325, 1379, 3293 |
| StyI | CCWWGG | 1 cut(s) | 2300 |
| TaaI | ACNGT | 6 cut(s) | 161, 319, 1364, 1907, 3034, 3220 |
| TaiI | ACGT | 4 cut(s) | 756, 1563, 1572, 2339 |
| TaqI | TCGA | 5 cut(s) | 923, 1688, 1947, 2150, 2487 |
| TaqII | GACCGA | 1 cut(s) | 3128 |
| TatI | WGTACW | 4 cut(s) | 5, 235, 2400, 2899 |
| TauI | GCSGC | 1 cut(s) | 1392 |
| TscAI | CASTG | 6 cut(s) | 478, 537, 1605, 2037, 2107, 2501 |
| TseFI | GTSAC | 2 cut(s) | 881, 2209 |
| TseI | GCWGC | 5 cut(s) | 738, 1708, 2323, 2499, 3212 |
| Tsp45I | GTSAC | 2 cut(s) | 881, 2209 |
| TspGWI | ACGGA | 2 cut(s) | 1215, 2910 |
| TspRI | CASTG | 6 cut(s) | 478, 537, 1605, 2037, 2107, 2501 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1486 |
| VpaK11BI | GGWCC | 2 cut(s) | 1618, 2819 |
| XapI | RAATTY | 8 cut(s) | 481, 731, 1263, 1672, 1779, 2602, 2759, 3098 |
| XceI | RCATGY | 2 cut(s) | 1338, 1858 |
| XmnI | GAANNNNTTC | 6 cut(s) | 592, 609, 1068, 1319, 1500, 2687 |
| XspI | CTAG | 6 cut(s) | 506, 810, 993, 1325, 1379, 3293 |
| ZraI | GACGTC | 1 cut(s) | 1561 |
| ZrmI | AGTACT | 1 cut(s) | 2402 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 302, 1470 |