TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 71 - 199 | 1.1e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 518 |
| AccIII | TCCGGA | 1 cut(s) | 280 |
| AciI | CCGC | 3 cut(s) | 174, 415, 634 |
| AclWI | GGATC | 1 cut(s) | 291 |
| AcoI | YGGCCR | 1 cut(s) | 135 |
| AcsI | RAATTY | 1 cut(s) | 222 |
| AcvI | CACGTG | 1 cut(s) | 489 |
| AfaI | GTAC | 3 cut(s) | 47, 544, 584 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 433, 672 |
| AflIII | ACRYGT | 1 cut(s) | 516 |
| AgsI | TTSAA | 6 cut(s) | 103, 120, 245, 377, 598, 631 |
| AjnI | CCWGG | 4 cut(s) | 211, 388, 477, 670 |
| AluBI | AGCT | 2 cut(s) | 274, 705 |
| AluI | AGCT | 2 cut(s) | 274, 705 |
| AlwI | GGATC | 1 cut(s) | 291 |
| Aor13HI | TCCGGA | 1 cut(s) | 280 |
| AoxI | GGCC | 2 cut(s) | 135, 663 |
| ApeKI | GCWGC | 2 cut(s) | 274, 492 |
| ApoI | RAATTY | 1 cut(s) | 222 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 115 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| BanII | GRGCYC | 1 cut(s) | 574 |
| BauI | CACGAG | 1 cut(s) | 465 |
| BbrPI | CACGTG | 1 cut(s) | 489 |
| BbvI | GCAGC | 2 cut(s) | 261, 479 |
| BccI | CCATC | 7 cut(s) | 22, 173, 295, 339, 412, 427, 605 |
| BceAI | ACGGC | 1 cut(s) | 122 |
| BciT130I | CCWGG | 4 cut(s) | 213, 390, 479, 672 |
| BciVI | GTATCC | 1 cut(s) | 475 |
| BfuI | GTATCC | 1 cut(s) | 475 |
| BisI | GCNGC | 2 cut(s) | 275, 493 |
| BlsI | GCNGC | 2 cut(s) | 276, 494 |
| Bme1390I | CCNGG | 4 cut(s) | 213, 390, 479, 672 |
| BmrFI | CCNGG | 4 cut(s) | 213, 390, 479, 672 |
| BmsI | GCATC | 1 cut(s) | 156 |
| Bpu10I | CCTNAGC | 1 cut(s) | 125 |
| BpuEI | CTTGAG | 2 cut(s) | 374, 703 |
| BsaAI | YACGTR | 1 cut(s) | 489 |
| BsaJI | CCNNGG | 2 cut(s) | 389, 671 |
| BsaWI | WCCGGW | 1 cut(s) | 280 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 433, 672 |
| BseAI | TCCGGA | 1 cut(s) | 280 |
| BseBI | CCWGG | 4 cut(s) | 213, 390, 479, 672 |
| BseDI | CCNNGG | 2 cut(s) | 389, 671 |
| BseGI | GGATG | 3 cut(s) | 306, 423, 438 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 433, 672 |
| BseRI | GAGGAG | 1 cut(s) | 674 |
| BseXI | GCAGC | 2 cut(s) | 261, 479 |
| Bsh1236I | CGCG | 1 cut(s) | 518 |
| BshFI | GGCC | 2 cut(s) | 137, 665 |
| BsiSI | CCGG | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 433, 672 |
| BsnI | GGCC | 2 cut(s) | 137, 665 |
| Bsp1286I | GDGCHC | 1 cut(s) | 574 |
| Bsp13I | TCCGGA | 1 cut(s) | 280 |
| Bsp143I | GATC | 2 cut(s) | 283, 439 |
| BspACI | CCGC | 3 cut(s) | 174, 415, 634 |
| BspANI | GGCC | 2 cut(s) | 137, 665 |
| BspEI | TCCGGA | 1 cut(s) | 280 |
| BspFNI | CGCG | 1 cut(s) | 518 |
| BspHI | TCATGA | 1 cut(s) | 555 |
| BspPI | GGATC | 1 cut(s) | 291 |
| BssECI | CCNNGG | 2 cut(s) | 389, 671 |
| BssMI | GATC | 2 cut(s) | 283, 439 |
| BssSI | CACGAG | 1 cut(s) | 465 |
| Bst2BI | CACGAG | 1 cut(s) | 465 |
| Bst2UI | CCWGG | 4 cut(s) | 213, 390, 479, 672 |
| Bst4CI | ACNGT | 2 cut(s) | 67, 268 |
| Bst6I | CTCTTC | 1 cut(s) | 554 |
| BstBAI | YACGTR | 1 cut(s) | 489 |
| BstDEI | CTNAG | 1 cut(s) | 125 |
| BstF5I | GGATG | 3 cut(s) | 306, 423, 438 |
| BstFNI | CGCG | 1 cut(s) | 518 |
| BstKTI | GATC | 2 cut(s) | 286, 442 |
| BstMBI | GATC | 2 cut(s) | 283, 439 |
| BstNI | CCWGG | 4 cut(s) | 213, 390, 479, 672 |
| BstSCI | CCNGG | 4 cut(s) | 211, 388, 477, 670 |
| BstUI | CGCG | 1 cut(s) | 518 |
| BstV1I | GCAGC | 2 cut(s) | 261, 479 |
| BsuI | GTATCC | 1 cut(s) | 475 |
| BsuRI | GGCC | 2 cut(s) | 137, 665 |
| BtgZI | GCGATG | 1 cut(s) | 369 |
| BtsCI | GGATG | 3 cut(s) | 306, 423, 438 |
| CciI | TCATGA | 1 cut(s) | 555 |
| Csp6I | GTAC | 3 cut(s) | 46, 543, 583 |
| CviAII | CATG | 3 cut(s) | 460, 556, 725 |
| CviJI | RGCY | 9 cut(s) | 99, 137, 274, 505, 572, 665, 670, 705, 716 |
| CviKI_1 | RGCY | 9 cut(s) | 99, 137, 274, 505, 572, 665, 670, 705, 716 |
| CviQI | GTAC | 3 cut(s) | 46, 543, 583 |
| DdeI | CTNAG | 1 cut(s) | 125 |
| DpnI | GATC | 2 cut(s) | 285, 441 |
| DpnII | GATC | 2 cut(s) | 283, 439 |
| EaeI | YGGCCR | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 1 cut(s) | 554 |
| EarI | CTCTTC | 1 cut(s) | 554 |
| Eco24I | GRGCYC | 1 cut(s) | 574 |
| Eco72I | CACGTG | 1 cut(s) | 489 |
| EcoRII | CCWGG | 4 cut(s) | 211, 388, 477, 670 |
| EcoT38I | GRGCYC | 1 cut(s) | 574 |
| FaeI | CATG | 3 cut(s) | 463, 559, 728 |
| FaiI | YATR | 4 cut(s) | 360, 461, 557, 726 |
| FatI | CATG | 3 cut(s) | 459, 555, 724 |
| Fnu4HI | GCNGC | 2 cut(s) | 275, 493 |
| FokI | GGATG | 3 cut(s) | 313, 430, 445 |
| FriOI | GRGCYC | 1 cut(s) | 574 |
| Fsp4HI | GCNGC | 2 cut(s) | 275, 493 |
| GluI | GCNGC | 2 cut(s) | 275, 493 |
| HaeIII | GGCC | 2 cut(s) | 137, 665 |
| HapII | CCGG | 1 cut(s) | 281 |
| Hin1II | CATG | 3 cut(s) | 463, 559, 728 |
| HinfI | GANTC | 5 cut(s) | 257, 290, 394, 637, 653 |
| HpaII | CCGG | 1 cut(s) | 281 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 543 |
| Hpy188I | TCNGA | 5 cut(s) | 229, 295, 336, 529, 658 |
| Hpy188III | TCNNGA | 6 cut(s) | 281, 287, 353, 556, 628, 641 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 543 |
| Hpy99I | CGWCG | 1 cut(s) | 192 |
| HpyAV | CCTTC | 1 cut(s) | 89 |
| HpyCH4III | ACNGT | 2 cut(s) | 67, 268 |
| HpyCH4IV | ACGT | 1 cut(s) | 488 |
| HpyCH4V | TGCA | 2 cut(s) | 689, 695 |
| HpyF3I | CTNAG | 1 cut(s) | 125 |
| HpySE526I | ACGT | 1 cut(s) | 488 |
| Hsp92II | CATG | 3 cut(s) | 463, 559, 728 |
| Kpn2I | TCCGGA | 1 cut(s) | 280 |
| Kzo9I | GATC | 2 cut(s) | 283, 439 |
| LmnI | GCTCC | 1 cut(s) | 271 |
| Lsp1109I | GCAGC | 2 cut(s) | 261, 479 |
| LweI | GCATC | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 488 |
| MaeIII | GTNAC | 1 cut(s) | 650 |
| MalI | GATC | 2 cut(s) | 285, 441 |
| MboI | GATC | 2 cut(s) | 283, 439 |
| MboII | GAAGA | 1 cut(s) | 571 |
| MfeI | CAATTG | 3 cut(s) | 70, 690, 696 |
| MhlI | GDGCHC | 1 cut(s) | 574 |
| MluCI | AATT | 7 cut(s) | 38, 70, 222, 372, 547, 690, 696 |
| MluI | ACGCGT | 1 cut(s) | 516 |
| MlyI | GAGTC | 2 cut(s) | 646, 647 |
| MnlI | CCTC | 8 cut(s) | 244, 288, 474, 555, 614, 652, 655, 727 |
| MroI | TCCGGA | 1 cut(s) | 280 |
| MroXI | GAANNNNTTC | 1 cut(s) | 115 |
| MseI | TTAA | 2 cut(s) | 59, 371 |
| MspI | CCGG | 1 cut(s) | 281 |
| MspR9I | CCNGG | 4 cut(s) | 213, 390, 479, 672 |
| MunI | CAATTG | 3 cut(s) | 70, 690, 696 |
| MvaI | CCWGG | 4 cut(s) | 213, 390, 479, 672 |
| MvnI | CGCG | 1 cut(s) | 518 |
| NdeII | GATC | 2 cut(s) | 283, 439 |
| NlaIII | CATG | 3 cut(s) | 463, 559, 728 |
| NmeAIII | GCCGAG | 1 cut(s) | 691 |
| NmuCI | GTSAC | 1 cut(s) | 650 |
| PagI | TCATGA | 1 cut(s) | 555 |
| PdmI | GAANNNNTTC | 1 cut(s) | 115 |
| PfeI | GAWTC | 3 cut(s) | 257, 290, 394 |
| PfoI | TCCNGGA | 2 cut(s) | 211, 477 |
| PkrI | GCNGC | 2 cut(s) | 276, 494 |
| PleI | GAGTC | 2 cut(s) | 645, 647 |
| PmaCI | CACGTG | 1 cut(s) | 489 |
| PmlI | CACGTG | 1 cut(s) | 489 |
| PpsI | GAGTC | 2 cut(s) | 645, 647 |
| Ppu21I | YACGTR | 1 cut(s) | 489 |
| Psp6I | CCWGG | 4 cut(s) | 211, 388, 477, 670 |
| PspCI | CACGTG | 1 cut(s) | 489 |
| PspGI | CCWGG | 4 cut(s) | 211, 388, 477, 670 |
| RsaI | GTAC | 3 cut(s) | 47, 544, 584 |
| RsaNI | GTAC | 3 cut(s) | 46, 543, 583 |
| SaqAI | TTAA | 2 cut(s) | 59, 371 |
| SatI | GCNGC | 2 cut(s) | 275, 493 |
| Sau3AI | GATC | 2 cut(s) | 283, 439 |
| SchI | GAGTC | 2 cut(s) | 646, 647 |
| ScrFI | CCNGG | 4 cut(s) | 213, 390, 479, 672 |
| SduI | GDGCHC | 1 cut(s) | 574 |
| SetI | ASST | 5 cut(s) | 276, 491, 566, 606, 707 |
| SfaNI | GCATC | 1 cut(s) | 156 |
| SmlI | CTYRAG | 2 cut(s) | 353, 718 |
| SmoI | CTYRAG | 2 cut(s) | 353, 718 |
| Sse9I | AATT | 7 cut(s) | 38, 70, 222, 372, 547, 690, 696 |
| SsiI | CCGC | 3 cut(s) | 174, 415, 634 |
| SspI | AATATT | 2 cut(s) | 114, 647 |
| StyD4I | CCNGG | 4 cut(s) | 211, 388, 477, 670 |
| TaaI | ACNGT | 2 cut(s) | 67, 268 |
| TaiI | ACGT | 1 cut(s) | 491 |
| TaqI | TCGA | 4 cut(s) | 8, 198, 237, 574 |
| TaqII | GACCGA | 2 cut(s) | 50, 180 |
| TasI | AATT | 7 cut(s) | 38, 70, 222, 372, 547, 690, 696 |
| TatI | WGTACW | 1 cut(s) | 45 |
| TfiI | GAWTC | 3 cut(s) | 257, 290, 394 |
| Tru1I | TTAA | 2 cut(s) | 59, 371 |
| Tru9I | TTAA | 2 cut(s) | 59, 371 |
| TseFI | GTSAC | 1 cut(s) | 650 |
| TseI | GCWGC | 2 cut(s) | 274, 492 |
| Tsp45I | GTSAC | 1 cut(s) | 650 |
| TspDTI | ATGAA | 5 cut(s) | 108, 249, 372, 448, 572 |
| XapI | RAATTY | 1 cut(s) | 222 |
| XmnI | GAANNNNTTC | 1 cut(s) | 115 |