TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 1 - 145 | 2.4e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 214 - 284 | 5.1e-11 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 443 - 556 | 1.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 613 - 701 | 2.9e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 769 - 918 | 2e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2364 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1478 |
| AccBSI | CCGCTC | 1 cut(s) | 379 |
| AccI | GTMKAC | 1 cut(s) | 2588 |
| AccII | CGCG | 2 cut(s) | 2624, 2637 |
| AccIII | TCCGGA | 1 cut(s) | 2374 |
| AciI | CCGC | 5 cut(s) | 379, 1524, 1721, 2635, 2637 |
| AclWI | GGATC | 4 cut(s) | 2046, 2246, 2385, 2429 |
| AcsI | RAATTY | 9 cut(s) | 48, 176, 579, 991, 1034, 1067, 1078, 1089, 1475 |
| AcuI | CTGAAG | 3 cut(s) | 1181, 1655, 1976 |
| AfaI | GTAC | 2 cut(s) | 1618, 2741 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 30, 446, 1192, 1478, 1618, 1730, 2235 |
| AflII | CTTAAG | 1 cut(s) | 1676 |
| AflIII | ACRYGT | 1 cut(s) | 2622 |
| AhlI | ACTAGT | 1 cut(s) | 109 |
| AjnI | CCWGG | 3 cut(s) | 862, 1007, 2305 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 545, 577, 1218, 1250, 1545, 1577, 2123, 2155 |
| AleI | CACNNNNGTG | 1 cut(s) | 2271 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1199, 1231 |
| Alw21I | GWGCWC | 2 cut(s) | 408, 2278 |
| Alw26I | GTCTC | 6 cut(s) | 341, 1253, 1604, 1613, 1644, 1697 |
| AlwI | GGATC | 4 cut(s) | 2046, 2246, 2385, 2429 |
| Ama87I | CYCGRG | 4 cut(s) | 1430, 1612, 2246, 2447 |
| Aor13HI | TCCGGA | 1 cut(s) | 2374 |
| AoxI | GGCC | 4 cut(s) | 1060, 1139, 1564, 1764 |
| ApeKI | GCWGC | 6 cut(s) | 859, 873, 1816, 2113, 2365, 2598 |
| ApoI | RAATTY | 9 cut(s) | 48, 176, 579, 991, 1034, 1067, 1078, 1089, 1475 |
| AseI | ATTAAT | 1 cut(s) | 2001 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 157, 837, 2206 |
| AspLEI | GCGC | 1 cut(s) | 2365 |
| AspS9I | GGNCC | 3 cut(s) | 1061, 1330, 1521 |
| AsuC2I | CCSGG | 2 cut(s) | 1613, 1614 |
| AsuHPI | GGTGA | 4 cut(s) | 308, 334, 1460, 2119 |
| AsuII | TTCGAA | 1 cut(s) | 426 |
| AvaI | CYCGRG | 4 cut(s) | 1430, 1612, 2246, 2447 |
| AvaII | GGWCC | 2 cut(s) | 1330, 1521 |
| BaeGI | GKGCMC | 1 cut(s) | 2123 |
| BanII | GRGCYC | 2 cut(s) | 408, 2731 |
| BauI | CACGAG | 1 cut(s) | 852 |
| BbsI | GAAGAC | 3 cut(s) | 860, 1207, 1952 |
| Bbv12I | GWGCWC | 2 cut(s) | 408, 2278 |
| BbvI | GCAGC | 6 cut(s) | 871, 885, 1803, 2125, 2377, 2585 |
| BceAI | ACGGC | 3 cut(s) | 861, 1635, 2692 |
| BciT130I | CCWGG | 3 cut(s) | 864, 1009, 2307 |
| BciVI | GTATCC | 2 cut(s) | 1119, 2492 |
| BcnI | CCSGG | 2 cut(s) | 1613, 1614 |
| BcoDI | GTCTC | 6 cut(s) | 341, 1253, 1604, 1613, 1644, 1697 |
| BcuI | ACTAGT | 1 cut(s) | 109 |
| BfrI | CTTAAG | 1 cut(s) | 1676 |
| BfuI | GTATCC | 2 cut(s) | 1119, 2492 |
| BglII | AGATCT | 1 cut(s) | 1231 |
| BisI | GCNGC | 6 cut(s) | 860, 874, 1817, 2114, 2366, 2599 |
| BlsI | GCNGC | 6 cut(s) | 861, 875, 1818, 2115, 2367, 2600 |
| Bme1390I | CCNGG | 5 cut(s) | 864, 1009, 1613, 1614, 2307 |
| Bme18I | GGWCC | 2 cut(s) | 1330, 1521 |
| BmeT110I | CYCGRG | 4 cut(s) | 1430, 1612, 2246, 2447 |
| BmgT120I | GGNCC | 3 cut(s) | 1061, 1330, 1521 |
| BmiI | GGNNCC | 3 cut(s) | 1063, 1522, 2373 |
| BmrFI | CCNGG | 5 cut(s) | 864, 1009, 1613, 1614, 2307 |
| BmsI | GCATC | 8 cut(s) | 76, 385, 613, 792, 1002, 1155, 1655, 2044 |
| BpiI | GAAGAC | 3 cut(s) | 860, 1207, 1952 |
| BpmI | CTGGAG | 2 cut(s) | 991, 1586 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2216 |
| Bpu14I | TTCGAA | 1 cut(s) | 426 |
| BpuEI | CTTGAG | 4 cut(s) | 147, 422, 1105, 1310 |
| BpuMI | CCSGG | 2 cut(s) | 1613, 1614 |
| BsaI | GGTCTC | 1 cut(s) | 1253 |
| BsaJI | CCNNGG | 6 cut(s) | 1444, 1612, 1728, 1826, 2528, 2635 |
| BsaWI | WCCGGW | 2 cut(s) | 2035, 2374 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1694, 1724, 2025, 2055 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 30, 446, 1192, 1478, 1618, 1730, 2235 |
| Bse1I | ACTGG | 1 cut(s) | 2330 |
| Bse3DI | GCAATG | 2 cut(s) | 660, 1341 |
| BseAI | TCCGGA | 1 cut(s) | 2374 |
| BseBI | CCWGG | 3 cut(s) | 864, 1009, 2307 |
| BseDI | CCNNGG | 6 cut(s) | 1444, 1612, 1728, 1826, 2528, 2635 |
| BseGI | GGATG | 9 cut(s) | 258, 807, 1017, 1201, 1333, 1337, 1494, 1670, 2261 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 30, 446, 1192, 1478, 1618, 1730, 2235 |
| BseMI | GCAATG | 2 cut(s) | 660, 1341 |
| BseMII | CTCAG | 6 cut(s) | 63, 153, 1453, 1521, 2000, 2246 |
| BseNI | ACTGG | 1 cut(s) | 2330 |
| BseRI | GAGGAG | 5 cut(s) | 329, 1896, 2268, 2271, 2753 |
| BseSI | GKGCMC | 1 cut(s) | 2123 |
| BseXI | GCAGC | 6 cut(s) | 871, 885, 1803, 2125, 2377, 2585 |
| Bsh1236I | CGCG | 2 cut(s) | 2624, 2637 |
| BshFI | GGCC | 4 cut(s) | 1062, 1141, 1566, 1766 |
| BsiHKAI | GWGCWC | 2 cut(s) | 408, 2278 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1430, 1612, 2246, 2447 |
| BsiSI | CCGG | 5 cut(s) | 1127, 1186, 1613, 2036, 2375 |
| BslFI | GGGAC | 2 cut(s) | 1534, 1746 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 30, 446, 1192, 1478, 1618, 1730, 2235 |
| BsmAI | GTCTC | 6 cut(s) | 341, 1253, 1604, 1613, 1644, 1697 |
| BsmBI | CGTCTC | 1 cut(s) | 341 |
| BsmFI | GGGAC | 2 cut(s) | 1534, 1746 |
| BsmI | GAATGC | 2 cut(s) | 665, 1004 |
| BsnI | GGCC | 4 cut(s) | 1062, 1141, 1566, 1766 |
| Bso31I | GGTCTC | 1 cut(s) | 1253 |
| BsoBI | CYCGRG | 4 cut(s) | 1430, 1612, 2246, 2447 |
| Bsp119I | TTCGAA | 1 cut(s) | 426 |
| Bsp1286I | GDGCHC | 4 cut(s) | 408, 2123, 2278, 2731 |
| Bsp13I | TCCGGA | 1 cut(s) | 2374 |
| Bsp143I | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| BspACI | CCGC | 5 cut(s) | 379, 1524, 1721, 2635, 2637 |
| BspANI | GGCC | 4 cut(s) | 1062, 1141, 1566, 1766 |
| BspCNI | CTCAG | 6 cut(s) | 64, 152, 1452, 1522, 1999, 2245 |
| BspEI | TCCGGA | 1 cut(s) | 2374 |
| BspFNI | CGCG | 2 cut(s) | 2624, 2637 |
| BspLI | GGNNCC | 3 cut(s) | 1063, 1522, 2373 |
| BspPI | GGATC | 4 cut(s) | 2046, 2246, 2385, 2429 |
| BspT104I | TTCGAA | 1 cut(s) | 426 |
| BspTI | CTTAAG | 1 cut(s) | 1676 |
| BspTNI | GGTCTC | 1 cut(s) | 1253 |
| BsrBI | CCGCTC | 1 cut(s) | 379 |
| BsrDI | GCAATG | 2 cut(s) | 660, 1341 |
| BsrI | ACTGG | 1 cut(s) | 2330 |
| BssECI | CCNNGG | 6 cut(s) | 1444, 1612, 1728, 1826, 2528, 2635 |
| BssMI | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| BssNAI | GTATAC | 1 cut(s) | 2589 |
| BssSI | CACGAG | 1 cut(s) | 852 |
| BssT1I | CCWWGG | 4 cut(s) | 1444, 1728, 1826, 2528 |
| Bst1107I | GTATAC | 1 cut(s) | 2589 |
| Bst2BI | CACGAG | 1 cut(s) | 852 |
| Bst2UI | CCWGG | 3 cut(s) | 864, 1009, 2307 |
| Bst4CI | ACNGT | 6 cut(s) | 951, 1319, 1368, 1708, 1839, 2158 |
| Bst6I | CTCTTC | 5 cut(s) | 966, 1128, 1647, 2003, 2711 |
| BstAFI | CTTAAG | 1 cut(s) | 1676 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1977 |
| BstBI | TTCGAA | 1 cut(s) | 426 |
| BstC8I | GCNNGC | 7 cut(s) | 829, 1305, 1725, 1814, 1969, 2370, 2484 |
| BstDEI | CTNAG | 7 cut(s) | 72, 139, 1439, 1530, 1986, 2216, 2232 |
| BstDSI | CCRYGG | 1 cut(s) | 2635 |
| BstF5I | GGATG | 9 cut(s) | 258, 807, 1017, 1201, 1333, 1337, 1494, 1670, 2261 |
| BstFNI | CGCG | 2 cut(s) | 2624, 2637 |
| BstHHI | GCGC | 1 cut(s) | 2365 |
| BstKTI | GATC | 9 cut(s) | 436, 784, 1234, 2041, 2241, 2380, 2428, 2437, 2548 |
| BstMAI | GTCTC | 6 cut(s) | 341, 1253, 1604, 1613, 1644, 1697 |
| BstMBI | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1977, 2369 |
| BstNI | CCWGG | 3 cut(s) | 864, 1009, 2307 |
| BstNSI | RCATGY | 1 cut(s) | 831 |
| BstSCI | CCNGG | 5 cut(s) | 862, 1007, 1611, 1612, 2305 |
| BstSLI | GKGCMC | 1 cut(s) | 2123 |
| BstUI | CGCG | 2 cut(s) | 2624, 2637 |
| BstV1I | GCAGC | 6 cut(s) | 871, 885, 1803, 2125, 2377, 2585 |
| BstV2I | GAAGAC | 3 cut(s) | 860, 1207, 1952 |
| BstX2I | RGATCY | 4 cut(s) | 1231, 2038, 2238, 2434 |
| BstYI | RGATCY | 4 cut(s) | 1231, 2038, 2238, 2434 |
| BstZ17I | GTATAC | 1 cut(s) | 2589 |
| BsuI | GTATCC | 2 cut(s) | 1119, 2492 |
| BsuRI | GGCC | 4 cut(s) | 1062, 1141, 1566, 1766 |
| BtgI | CCRYGG | 1 cut(s) | 2635 |
| BtgZI | GCGATG | 2 cut(s) | 2094, 2463 |
| BtsCI | GGATG | 9 cut(s) | 258, 807, 1017, 1201, 1333, 1337, 1494, 1670, 2261 |
| BtsIMutI | CAGTG | 1 cut(s) | 1713 |
| Cac8I | GCNNGC | 7 cut(s) | 829, 1305, 1725, 1814, 1969, 2370, 2484 |
| CfoI | GCGC | 1 cut(s) | 2365 |
| Cfr13I | GGNCC | 3 cut(s) | 1061, 1330, 1521 |
| Cfr42I | CCGCGG | 1 cut(s) | 2638 |
| Cfr9I | CCCGGG | 1 cut(s) | 1612 |
| CseI | GACGC | 2 cut(s) | 338, 2630 |
| Csp6I | GTAC | 2 cut(s) | 1617, 2740 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1642, 1677 |
| CviAII | CATG | 7 cut(s) | 101, 806, 828, 913, 2573, 2661, 2700 |
| CviQI | GTAC | 2 cut(s) | 1617, 2740 |
| DdeI | CTNAG | 7 cut(s) | 72, 139, 1439, 1530, 1986, 2216, 2232 |
| DpnI | GATC | 9 cut(s) | 435, 783, 1233, 2040, 2240, 2379, 2427, 2436, 2547 |
| DpnII | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| DraI | TTTAAA | 2 cut(s) | 1630, 1783 |
| Eam1104I | CTCTTC | 5 cut(s) | 966, 1128, 1647, 2003, 2711 |
| EarI | CTCTTC | 5 cut(s) | 966, 1128, 1647, 2003, 2711 |
| Ecl136II | GAGCTC | 1 cut(s) | 406 |
| Eco130I | CCWWGG | 4 cut(s) | 1444, 1728, 1826, 2528 |
| Eco24I | GRGCYC | 2 cut(s) | 408, 2731 |
| Eco31I | GGTCTC | 1 cut(s) | 1253 |
| Eco32I | GATATC | 1 cut(s) | 898 |
| Eco47I | GGWCC | 2 cut(s) | 1330, 1521 |
| Eco53kI | GAGCTC | 1 cut(s) | 406 |
| Eco57I | CTGAAG | 3 cut(s) | 1181, 1655, 1976 |
| Eco88I | CYCGRG | 4 cut(s) | 1430, 1612, 2246, 2447 |
| EcoICRI | GAGCTC | 1 cut(s) | 406 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1061 |
| EcoRI | GAATTC | 3 cut(s) | 176, 579, 1089 |
| EcoRII | CCWGG | 3 cut(s) | 862, 1007, 2305 |
| EcoRV | GATATC | 1 cut(s) | 898 |
| EcoT14I | CCWWGG | 4 cut(s) | 1444, 1728, 1826, 2528 |
| EcoT22I | ATGCAT | 2 cut(s) | 807, 2059 |
| EcoT38I | GRGCYC | 2 cut(s) | 408, 2731 |
| ErhI | CCWWGG | 4 cut(s) | 1444, 1728, 1826, 2528 |
| Esp3I | CGTCTC | 1 cut(s) | 341 |
| FaeI | CATG | 7 cut(s) | 104, 809, 831, 916, 2576, 2664, 2703 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 884, 916 |
| FaqI | GGGAC | 2 cut(s) | 1534, 1746 |
| FatI | CATG | 7 cut(s) | 100, 805, 827, 912, 2572, 2660, 2699 |
| FauI | CCCGC | 1 cut(s) | 2630 |
| FauNDI | CATATG | 2 cut(s) | 1097, 2535 |
| FblI | GTMKAC | 1 cut(s) | 2588 |
| Fnu4HI | GCNGC | 6 cut(s) | 860, 874, 1817, 2114, 2366, 2599 |
| FokI | GGATG | 9 cut(s) | 245, 814, 1024, 1208, 1320, 1324, 1501, 1677, 2248 |
| FriOI | GRGCYC | 2 cut(s) | 408, 2731 |
| Fsp4HI | GCNGC | 6 cut(s) | 860, 874, 1817, 2114, 2366, 2599 |
| FspI | TGCGCA | 1 cut(s) | 2364 |
| GlaI | GCGC | 1 cut(s) | 2364 |
| GluI | GCNGC | 6 cut(s) | 860, 874, 1817, 2114, 2366, 2599 |
| GsuI | CTGGAG | 2 cut(s) | 991, 1586 |
| HaeIII | GGCC | 4 cut(s) | 1062, 1141, 1566, 1766 |
| HapII | CCGG | 5 cut(s) | 1127, 1186, 1613, 2036, 2375 |
| HgaI | GACGC | 2 cut(s) | 338, 2630 |
| HhaI | GCGC | 1 cut(s) | 2365 |
| Hin1II | CATG | 7 cut(s) | 104, 809, 831, 916, 2576, 2664, 2703 |
| Hin6I | GCGC | 1 cut(s) | 2363 |
| HinP1I | GCGC | 1 cut(s) | 2363 |
| HincII | GTYRAC | 2 cut(s) | 107, 1371 |
| HindII | GTYRAC | 2 cut(s) | 107, 1371 |
| HindIII | AAGCTT | 3 cut(s) | 1358, 1673, 1757 |
| HpaII | CCGG | 5 cut(s) | 1127, 1186, 1613, 2036, 2375 |
| HphI | GGTGA | 4 cut(s) | 308, 334, 1460, 2119 |
| Hpy166II | GTNNAC | 5 cut(s) | 107, 959, 1351, 1371, 2589 |
| Hpy188I | TCNGA | 9 cut(s) | 172, 534, 941, 1284, 1578, 1714, 2104, 2389, 2430 |
| Hpy8I | GTNNAC | 5 cut(s) | 107, 959, 1351, 1371, 2589 |
| Hpy99I | CGWCG | 3 cut(s) | 354, 1898, 2624 |
| HpyCH4III | ACNGT | 6 cut(s) | 951, 1319, 1368, 1708, 1839, 2158 |
| HpyCH4IV | ACGT | 2 cut(s) | 334, 1735 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1977, 2369 |
| HpyF3I | CTNAG | 7 cut(s) | 72, 139, 1439, 1530, 1986, 2216, 2232 |
| HpySE526I | ACGT | 2 cut(s) | 334, 1735 |
| Hsp92II | CATG | 7 cut(s) | 104, 809, 831, 916, 2576, 2664, 2703 |
| HspAI | GCGC | 1 cut(s) | 2363 |
| Kpn2I | TCCGGA | 1 cut(s) | 2374 |
| KspI | CCGCGG | 1 cut(s) | 2638 |
| Kzo9I | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| LmnI | GCTCC | 2 cut(s) | 2281, 2377 |
| Lsp1109I | GCAGC | 6 cut(s) | 871, 885, 1803, 2125, 2377, 2585 |
| LweI | GCATC | 8 cut(s) | 76, 385, 613, 792, 1002, 1155, 1655, 2044 |
| MaeII | ACGT | 2 cut(s) | 334, 1735 |
| MaeIII | GTNAC | 8 cut(s) | 254, 316, 413, 567, 1313, 1448, 2286, 2641 |
| MalI | GATC | 9 cut(s) | 435, 783, 1233, 2040, 2240, 2379, 2427, 2436, 2547 |
| MbiI | CCGCTC | 1 cut(s) | 379 |
| MboI | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| MfeI | CAATTG | 4 cut(s) | 1548, 2161, 2459, 2466 |
| MflI | RGATCY | 4 cut(s) | 1231, 2038, 2238, 2434 |
| MhlI | GDGCHC | 4 cut(s) | 408, 2123, 2278, 2731 |
| MluI | ACGCGT | 1 cut(s) | 2622 |
| MlyI | GAGTC | 7 cut(s) | 575, 842, 1615, 1644, 1801, 2252, 2459 |
| MmeI | TCCRAC | 2 cut(s) | 614, 663 |
| Mph1103I | ATGCAT | 2 cut(s) | 807, 2059 |
| MroI | TCCGGA | 1 cut(s) | 2374 |
| MroXI | GAANNNNTTC | 3 cut(s) | 157, 837, 2206 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2271 |
| MspA1I | CMGCKG | 2 cut(s) | 2368, 2637 |
| MspCI | CTTAAG | 1 cut(s) | 1676 |
| MspI | CCGG | 5 cut(s) | 1127, 1186, 1613, 2036, 2375 |
| MspR9I | CCNGG | 5 cut(s) | 864, 1009, 1613, 1614, 2307 |
| MunI | CAATTG | 4 cut(s) | 1548, 2161, 2459, 2466 |
| Mva1269I | GAATGC | 2 cut(s) | 665, 1004 |
| MvaI | CCWGG | 3 cut(s) | 864, 1009, 2307 |
| MvnI | CGCG | 2 cut(s) | 2624, 2637 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1977, 2369 |
| NciI | CCSGG | 2 cut(s) | 1613, 1614 |
| NdeI | CATATG | 2 cut(s) | 1097, 2535 |
| NdeII | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| NlaIII | CATG | 7 cut(s) | 104, 809, 831, 916, 2576, 2664, 2703 |
| NlaIV | GGNNCC | 3 cut(s) | 1063, 1522, 2373 |
| NmuCI | GTSAC | 6 cut(s) | 254, 413, 567, 1313, 1448, 2286 |
| NsbI | TGCGCA | 1 cut(s) | 2364 |
| NsiI | ATGCAT | 2 cut(s) | 807, 2059 |
| NspI | RCATGY | 1 cut(s) | 831 |
| NspV | TTCGAA | 1 cut(s) | 426 |
| OliI | CACNNNNGTG | 1 cut(s) | 2271 |
| PaeI | GCATGC | 1 cut(s) | 831 |
| PaeR7I | CTCGAG | 2 cut(s) | 1430, 2447 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 423 |
| PctI | GAATGC | 2 cut(s) | 665, 1004 |
| PdmI | GAANNNNTTC | 3 cut(s) | 157, 837, 2206 |
| PflFI | GACNNNGTC | 1 cut(s) | 1708 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1478 |
| PfoI | TCCNGGA | 2 cut(s) | 1007, 2305 |
| PkrI | GCNGC | 6 cut(s) | 861, 875, 1818, 2115, 2367, 2600 |
| PleI | GAGTC | 7 cut(s) | 574, 842, 1614, 1644, 1800, 2252, 2458 |
| PpsI | GAGTC | 7 cut(s) | 574, 842, 1614, 1644, 1800, 2252, 2458 |
| PshBI | ATTAAT | 1 cut(s) | 2001 |
| Psp124BI | GAGCTC | 1 cut(s) | 408 |
| Psp6I | CCWGG | 3 cut(s) | 862, 1007, 2305 |
| PspGI | CCWGG | 3 cut(s) | 862, 1007, 2305 |
| PspN4I | GGNNCC | 3 cut(s) | 1063, 1522, 2373 |
| PspPI | GGNCC | 3 cut(s) | 1061, 1330, 1521 |
| PsuI | RGATCY | 4 cut(s) | 1231, 2038, 2238, 2434 |
| PsyI | GACNNNGTC | 1 cut(s) | 1708 |
| PvuII | CAGCTG | 1 cut(s) | 2368 |
| RsaI | GTAC | 2 cut(s) | 1618, 2741 |
| RsaNI | GTAC | 2 cut(s) | 1617, 2740 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2271 |
| SacI | GAGCTC | 1 cut(s) | 408 |
| SacII | CCGCGG | 1 cut(s) | 2638 |
| SatI | GCNGC | 6 cut(s) | 860, 874, 1817, 2114, 2366, 2599 |
| Sau3AI | GATC | 9 cut(s) | 433, 781, 1231, 2038, 2238, 2377, 2425, 2434, 2545 |
| Sau96I | GGNCC | 3 cut(s) | 1061, 1330, 1521 |
| SchI | GAGTC | 7 cut(s) | 575, 842, 1615, 1644, 1801, 2252, 2459 |
| ScrFI | CCNGG | 5 cut(s) | 864, 1009, 1613, 1614, 2307 |
| SduI | GDGCHC | 4 cut(s) | 408, 2123, 2278, 2731 |
| SfaNI | GCATC | 8 cut(s) | 76, 385, 613, 792, 1002, 1155, 1655, 2044 |
| Sfr274I | CTCGAG | 2 cut(s) | 1430, 2447 |
| Sfr303I | CCGCGG | 1 cut(s) | 2638 |
| SfuI | TTCGAA | 1 cut(s) | 426 |
| SgrBI | CCGCGG | 1 cut(s) | 2638 |
| SinI | GGWCC | 2 cut(s) | 1330, 1521 |
| SlaI | CTCGAG | 2 cut(s) | 1430, 2447 |
| SmaI | CCCGGG | 1 cut(s) | 1614 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2271 |
| SmlI | CTYRAG | 7 cut(s) | 162, 401, 1084, 1289, 1430, 1676, 2447 |
| SmoI | CTYRAG | 7 cut(s) | 162, 401, 1084, 1289, 1430, 1676, 2447 |
| SpeI | ACTAGT | 1 cut(s) | 109 |
| SphI | GCATGC | 1 cut(s) | 831 |
| SsiI | CCGC | 5 cut(s) | 379, 1524, 1721, 2635, 2637 |
| SspI | AATATT | 3 cut(s) | 716, 1626, 2205 |
| SstI | GAGCTC | 1 cut(s) | 408 |
| StyD4I | CCNGG | 5 cut(s) | 862, 1007, 1611, 1612, 2305 |
| StyI | CCWWGG | 4 cut(s) | 1444, 1728, 1826, 2528 |
| TaaI | ACNGT | 6 cut(s) | 951, 1319, 1368, 1708, 1839, 2158 |
| TaiI | ACGT | 2 cut(s) | 337, 1738 |
| TscAI | CASTG | 1 cut(s) | 1713 |
| TseFI | GTSAC | 6 cut(s) | 254, 413, 567, 1313, 1448, 2286 |
| TseI | GCWGC | 6 cut(s) | 859, 873, 1816, 2113, 2365, 2598 |
| Tsp45I | GTSAC | 6 cut(s) | 254, 413, 567, 1313, 1448, 2286 |
| TspGWI | ACGGA | 1 cut(s) | 2274 |
| TspMI | CCCGGG | 1 cut(s) | 1612 |
| TspRI | CASTG | 1 cut(s) | 1713 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1708 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1478 |
| Vha464I | CTTAAG | 1 cut(s) | 1676 |
| VpaK11BI | GGWCC | 2 cut(s) | 1330, 1521 |
| VspI | ATTAAT | 1 cut(s) | 2001 |
| XapI | RAATTY | 9 cut(s) | 48, 176, 579, 991, 1034, 1067, 1078, 1089, 1475 |
| XbaI | TCTAGA | 1 cut(s) | 277 |
| XceI | RCATGY | 1 cut(s) | 831 |
| XhoI | CTCGAG | 2 cut(s) | 1430, 2447 |
| XmaI | CCCGGG | 1 cut(s) | 1612 |
| XmiI | GTMKAC | 1 cut(s) | 2588 |
| XmnI | GAANNNNTTC | 3 cut(s) | 157, 837, 2206 |
| Zsp2I | ATGCAT | 2 cut(s) | 807, 2059 |