TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 22 - 205 | 1.5e-53 | TIR domain |
| TIR_2 | PF13676 | 25 - 122 | 1.2e-15 | TIR domain |
| NB-ARC | PF00931 | 219 - 370 | 6.8e-22 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 508 | 4.9e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 827 - 914 | 2.9e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 828 - 885 | 1.9e-07 | Leucine rich repeat |
| C-JID | PF20160 | 981 - 1115 | 6.6e-09 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 513, 2255 |
| Acc65I | GGTACC | 1 cut(s) | 2288 |
| AccB1I | GGYRCC | 1 cut(s) | 2288 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1495, 2150 |
| AccII | CGCG | 3 cut(s) | 132, 215, 3245 |
| AccIII | TCCGGA | 2 cut(s) | 2440, 3010 |
| AclWI | GGATC | 7 cut(s) | 356, 369, 1911, 2389, 2685, 3021, 3065 |
| AcoI | YGGCCR | 2 cut(s) | 480, 1811 |
| AcuI | CTGAAG | 2 cut(s) | 420, 2327 |
| AdeI | CACNNNGTG | 1 cut(s) | 282 |
| AfaI | GTAC | 7 cut(s) | 143, 731, 1205, 1234, 2290, 2780, 3332 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 445, 1121, 1495, 1864, 2150, 3420, 3425 |
| AflIII | ACRYGT | 1 cut(s) | 550 |
| AhlI | ACTAGT | 1 cut(s) | 793 |
| AjnI | CCWGG | 5 cut(s) | 2284, 2360, 2941, 3204, 3418 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2217, 2249 |
| AleI | CACNNNNGTG | 1 cut(s) | 1355 |
| Alw21I | GWGCWC | 3 cut(s) | 14, 183, 1083 |
| Alw26I | GTCTC | 8 cut(s) | 121, 1016, 1925, 2276, 2316, 2333, 2340, 2562 |
| AlwI | GGATC | 7 cut(s) | 356, 369, 1911, 2389, 2685, 3021, 3065 |
| Ama87I | CYCGRG | 1 cut(s) | 2102 |
| Aor13HI | TCCGGA | 2 cut(s) | 2440, 3010 |
| AoxI | GGCC | 6 cut(s) | 480, 1732, 1811, 2236, 2351, 3411 |
| ApeKI | GCWGC | 6 cut(s) | 390, 1531, 1545, 2124, 3004, 3219 |
| AseI | ATTAAT | 1 cut(s) | 2640 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1167, 1509, 2845, 3468 |
| Asp718I | GGTACC | 1 cut(s) | 2288 |
| AspLEI | GCGC | 2 cut(s) | 221, 3247 |
| AspS9I | GGNCC | 5 cut(s) | 1486, 1733, 2002, 2193, 3428 |
| AsuC2I | CCSGG | 1 cut(s) | 1536 |
| AsuHPI | GGTGA | 7 cut(s) | 42, 104, 249, 983, 1009, 1369, 2758 |
| AsuII | TTCGAA | 1 cut(s) | 1101 |
| AvaI | CYCGRG | 1 cut(s) | 2102 |
| AvaII | GGWCC | 4 cut(s) | 1486, 2002, 2193, 3428 |
| AxyI | CCTNAGG | 1 cut(s) | 654 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 125, 158 |
| BalI | TGGCCA | 1 cut(s) | 482 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BanI | GGYRCC | 1 cut(s) | 2288 |
| BanII | GRGCYC | 2 cut(s) | 183, 1083 |
| BauI | CACGAG | 4 cut(s) | 33, 1524, 3192, 3214 |
| BbsI | GAAGAC | 3 cut(s) | 102, 1879, 2591 |
| Bbv12I | GWGCWC | 3 cut(s) | 14, 183, 1083 |
| BbvI | GCAGC | 6 cut(s) | 402, 1543, 1557, 2111, 2991, 3206 |
| BceAI | ACGGC | 1 cut(s) | 2539 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 94, 128, 3273, 3307 |
| BciT130I | CCWGG | 5 cut(s) | 2286, 2362, 2943, 3206, 3420 |
| BciVI | GTATCC | 2 cut(s) | 1791, 3202 |
| BcnI | CCSGG | 1 cut(s) | 1536 |
| BcoDI | GTCTC | 8 cut(s) | 121, 1016, 1925, 2276, 2316, 2333, 2340, 2562 |
| BcuI | ACTAGT | 1 cut(s) | 793 |
| BfmI | CTRYAG | 1 cut(s) | 137 |
| BfuI | GTATCC | 2 cut(s) | 1791, 3202 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2362 |
| BglII | AGATCT | 1 cut(s) | 1213 |
| BisI | GCNGC | 9 cut(s) | 391, 1532, 1546, 1549, 2125, 2354, 2868, 3005, 3220 |
| BlpI | GCTNAGC | 1 cut(s) | 720 |
| BlsI | GCNGC | 9 cut(s) | 392, 1533, 1547, 1550, 2126, 2355, 2869, 3006, 3221 |
| Bme1390I | CCNGG | 6 cut(s) | 1536, 2286, 2362, 2943, 3206, 3420 |
| Bme18I | GGWCC | 4 cut(s) | 1486, 2002, 2193, 3428 |
| BmeT110I | CYCGRG | 1 cut(s) | 2102 |
| BmgT120I | GGNCC | 5 cut(s) | 1486, 1733, 2002, 2193, 3428 |
| BmiI | GGNNCC | 6 cut(s) | 363, 862, 1735, 2194, 2290, 2445 |
| BmrFI | CCNGG | 6 cut(s) | 1536, 2286, 2362, 2943, 3206, 3420 |
| BpiI | GAAGAC | 3 cut(s) | 102, 1879, 2591 |
| BpmI | CTGGAG | 2 cut(s) | 1853, 2258 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1174, 2855, 2871 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 720 |
| Bpu14I | TTCGAA | 1 cut(s) | 1101 |
| BpuEI | CTTGAG | 7 cut(s) | 100, 1097, 1982, 2113, 2160, 3104, 3467 |
| BpuMI | CCSGG | 1 cut(s) | 1536 |
| BsaI | GGTCTC | 1 cut(s) | 1925 |
| BsaJI | CCNNGG | 3 cut(s) | 315, 2471, 3419 |
| BsaWI | WCCGGW | 3 cut(s) | 2440, 2674, 3010 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 8, 38, 2435, 2465, 2664, 2694 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 445, 1121, 1495, 1864, 2150, 3420, 3425 |
| Bse118I | RCCGGY | 2 cut(s) | 144, 343 |
| Bse1I | ACTGG | 5 cut(s) | 1308, 1836, 2447, 3060, 3156 |
| Bse21I | CCTNAGG | 1 cut(s) | 654 |
| Bse3DI | GCAATG | 2 cut(s) | 1335, 2013 |
| BseAI | TCCGGA | 2 cut(s) | 2440, 3010 |
| BseBI | CCWGG | 5 cut(s) | 2286, 2362, 2943, 3206, 3420 |
| BseDI | CCNNGG | 3 cut(s) | 315, 2471, 3419 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 445, 1121, 1495, 1864, 2150, 3420, 3425 |
| BseMI | GCAATG | 2 cut(s) | 1335, 2013 |
| BseMII | CTCAG | 3 cut(s) | 645, 2125, 2885 |
| BseNI | ACTGG | 5 cut(s) | 1308, 1836, 2447, 3060, 3156 |
| BseRI | GAGGAG | 5 cut(s) | 671, 1004, 2662, 3344, 3422 |
| BseXI | GCAGC | 6 cut(s) | 402, 1543, 1557, 2111, 2991, 3206 |
| Bsh1236I | CGCG | 3 cut(s) | 132, 215, 3245 |
| Bsh1285I | CGRYCG | 1 cut(s) | 175 |
| BshFI | GGCC | 6 cut(s) | 482, 1734, 1813, 2238, 2353, 3413 |
| BshNI | GGYRCC | 1 cut(s) | 2288 |
| BsiEI | CGRYCG | 1 cut(s) | 175 |
| BsiHKAI | GWGCWC | 3 cut(s) | 14, 183, 1083 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2102 |
| BsiSI | CCGG | 8 cut(s) | 145, 344, 1536, 1810, 1858, 2441, 2675, 3011 |
| BslFI | GGGAC | 1 cut(s) | 2206 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 445, 1121, 1495, 1864, 2150, 3420, 3425 |
| BsmAI | GTCTC | 8 cut(s) | 121, 1016, 1925, 2276, 2316, 2333, 2340, 2562 |
| BsmBI | CGTCTC | 3 cut(s) | 121, 1016, 2562 |
| BsmFI | GGGAC | 1 cut(s) | 2206 |
| BsmI | GAATGC | 2 cut(s) | 1340, 1676 |
| BsnI | GGCC | 6 cut(s) | 482, 1734, 1813, 2238, 2353, 3413 |
| Bso31I | GGTCTC | 1 cut(s) | 1925 |
| BsoBI | CYCGRG | 1 cut(s) | 2102 |
| Bsp119I | TTCGAA | 1 cut(s) | 1101 |
| Bsp1286I | GDGCHC | 3 cut(s) | 14, 183, 1083 |
| Bsp13I | TCCGGA | 2 cut(s) | 2440, 3010 |
| Bsp1407I | TGTACA | 1 cut(s) | 1203 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 720 |
| Bsp19I | CCATGG | 1 cut(s) | 315 |
| Bsp68I | TCGCGA | 1 cut(s) | 215 |
| BspANI | GGCC | 6 cut(s) | 482, 1734, 1813, 2238, 2353, 3413 |
| BspCNI | CTCAG | 3 cut(s) | 646, 2124, 2884 |
| BspEI | TCCGGA | 2 cut(s) | 2440, 3010 |
| BspFNI | CGCG | 3 cut(s) | 132, 215, 3245 |
| BspHI | TCATGA | 1 cut(s) | 1584 |
| BspLI | GGNNCC | 6 cut(s) | 363, 862, 1735, 2194, 2290, 2445 |
| BspMAI | CTGCAG | 1 cut(s) | 141 |
| BspPI | GGATC | 7 cut(s) | 356, 369, 1911, 2389, 2685, 3021, 3065 |
| BspT104I | TTCGAA | 1 cut(s) | 1101 |
| BspT107I | GGYRCC | 1 cut(s) | 2288 |
| BspTNI | GGTCTC | 1 cut(s) | 1925 |
| BsrDI | GCAATG | 2 cut(s) | 1335, 2013 |
| BsrFI | RCCGGY | 2 cut(s) | 144, 343 |
| BsrGI | TGTACA | 1 cut(s) | 1203 |
| BsrI | ACTGG | 5 cut(s) | 1308, 1836, 2447, 3060, 3156 |
| BssAI | RCCGGY | 2 cut(s) | 144, 343 |
| BssECI | CCNNGG | 3 cut(s) | 315, 2471, 3419 |
| BssSI | CACGAG | 4 cut(s) | 33, 1524, 3192, 3214 |
| BssT1I | CCWWGG | 2 cut(s) | 315, 2471 |
| Bst2BI | CACGAG | 4 cut(s) | 33, 1524, 3192, 3214 |
| Bst2UI | CCWGG | 5 cut(s) | 2286, 2362, 2943, 3206, 3420 |
| Bst4CI | ACNGT | 7 cut(s) | 1623, 1991, 2040, 2484, 2635, 2797, 2998 |
| Bst6I | CTCTTC | 3 cut(s) | 1638, 1800, 3302 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2616 |
| BstAUI | TGTACA | 1 cut(s) | 1203 |
| BstBI | TTCGAA | 1 cut(s) | 1101 |
| BstC8I | GCNNGC | 5 cut(s) | 213, 217, 297, 2358, 2552 |
| BstDSI | CCRYGG | 1 cut(s) | 315 |
| BstFNI | CGCG | 3 cut(s) | 132, 215, 3245 |
| BstHHI | GCGC | 2 cut(s) | 221, 3247 |
| BstMAI | GTCTC | 8 cut(s) | 121, 1016, 1925, 2276, 2316, 2333, 2340, 2562 |
| BstMCI | CGRYCG | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 145, 2362, 2418, 2616 |
| BstNI | CCWGG | 5 cut(s) | 2286, 2362, 2943, 3206, 3420 |
| BstSCI | CCNGG | 6 cut(s) | 1534, 2284, 2360, 2941, 3204, 3418 |
| BstSFI | CTRYAG | 1 cut(s) | 137 |
| BstUI | CGCG | 3 cut(s) | 132, 215, 3245 |
| BstV1I | GCAGC | 6 cut(s) | 402, 1543, 1557, 2111, 2991, 3206 |
| BstV2I | GAAGAC | 3 cut(s) | 102, 1879, 2591 |
| BstX2I | RGATCY | 5 cut(s) | 361, 1213, 1903, 2677, 3070 |
| BstYI | RGATCY | 5 cut(s) | 361, 1213, 1903, 2677, 3070 |
| Bsu36I | CCTNAGG | 1 cut(s) | 654 |
| BsuI | GTATCC | 2 cut(s) | 1791, 3202 |
| BsuRI | GGCC | 6 cut(s) | 482, 1734, 1813, 2238, 2353, 3413 |
| BtgI | CCRYGG | 1 cut(s) | 315 |
| BtgZI | GCGATG | 1 cut(s) | 3099 |
| BtsI | GCAGTG | 2 cut(s) | 461, 2025 |
| BtsIMutI | CAGTG | 6 cut(s) | 461, 1301, 2025, 2454, 2793, 2994 |
| BtuMI | TCGCGA | 1 cut(s) | 215 |
| Cac8I | GCNNGC | 5 cut(s) | 213, 217, 297, 2358, 2552 |
| CciI | TCATGA | 1 cut(s) | 1584 |
| CfoI | GCGC | 2 cut(s) | 221, 3247 |
| Cfr10I | RCCGGY | 2 cut(s) | 144, 343 |
| Cfr13I | GGNCC | 5 cut(s) | 1486, 1733, 2002, 2193, 3428 |
| CseI | GACGC | 3 cut(s) | 557, 1013, 3251 |
| Csp6I | GTAC | 7 cut(s) | 142, 730, 1204, 1233, 2289, 2779, 3331 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 429, 464, 3244, 3279 |
| CviQI | GTAC | 7 cut(s) | 142, 730, 1204, 1233, 2289, 2779, 3331 |
| DraI | TTTAAA | 2 cut(s) | 2302, 2428 |
| DraIII | CACNNNGTG | 1 cut(s) | 282 |
| EaeI | YGGCCR | 2 cut(s) | 480, 1811 |
| Eam1104I | CTCTTC | 3 cut(s) | 1638, 1800, 3302 |
| EarI | CTCTTC | 3 cut(s) | 1638, 1800, 3302 |
| Ecl136II | GAGCTC | 2 cut(s) | 181, 1081 |
| Eco130I | CCWWGG | 2 cut(s) | 315, 2471 |
| Eco24I | GRGCYC | 2 cut(s) | 183, 1083 |
| Eco31I | GGTCTC | 1 cut(s) | 1925 |
| Eco47I | GGWCC | 4 cut(s) | 1486, 2002, 2193, 3428 |
| Eco53kI | GAGCTC | 2 cut(s) | 181, 1081 |
| Eco57I | CTGAAG | 2 cut(s) | 420, 2327 |
| Eco81I | CCTNAGG | 1 cut(s) | 654 |
| Eco88I | CYCGRG | 1 cut(s) | 2102 |
| EcoICRI | GAGCTC | 2 cut(s) | 181, 1081 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1733 |
| EcoRI | GAATTC | 2 cut(s) | 336, 3285 |
| EcoRII | CCWGG | 5 cut(s) | 2284, 2360, 2941, 3204, 3418 |
| EcoT14I | CCWWGG | 2 cut(s) | 315, 2471 |
| EcoT22I | ATGCAT | 1 cut(s) | 1479 |
| EcoT38I | GRGCYC | 2 cut(s) | 183, 1083 |
| ErhI | CCWWGG | 2 cut(s) | 315, 2471 |
| Esp3I | CGTCTC | 3 cut(s) | 121, 1016, 2562 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 377, 409 |
| FaqI | GGGAC | 1 cut(s) | 2206 |
| FauI | CCCGC | 2 cut(s) | 110, 316 |
| Fnu4HI | GCNGC | 9 cut(s) | 391, 1532, 1546, 1549, 2125, 2354, 2868, 3005, 3220 |
| FriOI | GRGCYC | 2 cut(s) | 183, 1083 |
| Fsp4HI | GCNGC | 9 cut(s) | 391, 1532, 1546, 1549, 2125, 2354, 2868, 3005, 3220 |
| GlaI | GCGC | 2 cut(s) | 220, 3246 |
| GluI | GCNGC | 9 cut(s) | 391, 1532, 1546, 1549, 2125, 2354, 2868, 3005, 3220 |
| GsuI | CTGGAG | 2 cut(s) | 1853, 2258 |
| HaeIII | GGCC | 6 cut(s) | 482, 1734, 1813, 2238, 2353, 3413 |
| HapII | CCGG | 8 cut(s) | 145, 344, 1536, 1810, 1858, 2441, 2675, 3011 |
| HgaI | GACGC | 3 cut(s) | 557, 1013, 3251 |
| HhaI | GCGC | 2 cut(s) | 221, 3247 |
| Hin6I | GCGC | 2 cut(s) | 219, 3245 |
| HinP1I | GCGC | 2 cut(s) | 219, 3245 |
| HincII | GTYRAC | 1 cut(s) | 2043 |
| HindII | GTYRAC | 1 cut(s) | 2043 |
| HindIII | AAGCTT | 3 cut(s) | 465, 2030, 2399 |
| HpaII | CCGG | 8 cut(s) | 145, 344, 1536, 1810, 1858, 2441, 2675, 3011 |
| HphI | GGTGA | 7 cut(s) | 42, 104, 249, 983, 1009, 1369, 2758 |
| Hpy166II | GTNNAC | 7 cut(s) | 730, 791, 1631, 2023, 2043, 2779, 2789 |
| Hpy188I | TCNGA | 9 cut(s) | 207, 370, 589, 611, 1956, 2959, 3025, 3066, 3406 |
| Hpy8I | GTNNAC | 7 cut(s) | 730, 791, 1631, 2023, 2043, 2779, 2789 |
| Hpy99I | CGWCG | 5 cut(s) | 374, 1029, 1518, 2537, 3245 |
| HpyCH4III | ACNGT | 7 cut(s) | 1623, 1991, 2040, 2484, 2635, 2797, 2998 |
| HpyCH4IV | ACGT | 3 cut(s) | 372, 550, 1009 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 145, 2362, 2418, 2616 |
| HpySE526I | ACGT | 3 cut(s) | 372, 550, 1009 |
| HspAI | GCGC | 2 cut(s) | 219, 3245 |
| Kpn2I | TCCGGA | 2 cut(s) | 2440, 3010 |
| KpnI | GGTACC | 1 cut(s) | 2292 |
| LmnI | GCTCC | 4 cut(s) | 451, 655, 2443, 3001 |
| Lsp1109I | GCAGC | 6 cut(s) | 402, 1543, 1557, 2111, 2991, 3206 |
| MaeII | ACGT | 3 cut(s) | 372, 550, 1009 |
| MaeIII | GTNAC | 8 cut(s) | 431, 765, 929, 991, 1088, 1278, 1985, 3398 |
| MfeI | CAATTG | 4 cut(s) | 2220, 2800, 3438, 3444 |
| MflI | RGATCY | 5 cut(s) | 361, 1213, 1903, 2677, 3070 |
| MhlI | GDGCHC | 3 cut(s) | 14, 183, 1083 |
| MlsI | TGGCCA | 1 cut(s) | 482 |
| MluNI | TGGCCA | 1 cut(s) | 482 |
| MlyI | GAGTC | 5 cut(s) | 320, 2446, 3394, 3395, 3474 |
| MmeI | TCCRAC | 3 cut(s) | 41, 393, 589 |
| Mox20I | TGGCCA | 1 cut(s) | 482 |
| Mph1103I | ATGCAT | 1 cut(s) | 1479 |
| MroI | TCCGGA | 2 cut(s) | 2440, 3010 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1167, 1509, 2845, 3468 |
| MscI | TGGCCA | 1 cut(s) | 482 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1355, 1563, 2018, 2577 |
| Msp20I | TGGCCA | 1 cut(s) | 482 |
| MspA1I | CMGCKG | 1 cut(s) | 1802 |
| MspI | CCGG | 8 cut(s) | 145, 344, 1536, 1810, 1858, 2441, 2675, 3011 |
| MspR9I | CCNGG | 6 cut(s) | 1536, 2286, 2362, 2943, 3206, 3420 |
| MunI | CAATTG | 4 cut(s) | 2220, 2800, 3438, 3444 |
| Mva1269I | GAATGC | 2 cut(s) | 1340, 1676 |
| MvaI | CCWGG | 5 cut(s) | 2286, 2362, 2943, 3206, 3420 |
| MvnI | CGCG | 3 cut(s) | 132, 215, 3245 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 145, 2362, 2418, 2616 |
| NciI | CCSGG | 1 cut(s) | 1536 |
| NcoI | CCATGG | 1 cut(s) | 315 |
| NlaIV | GGNNCC | 6 cut(s) | 363, 862, 1735, 2194, 2290, 2445 |
| NmeAIII | GCCGAG | 1 cut(s) | 3439 |
| NmuCI | GTSAC | 5 cut(s) | 929, 1088, 1278, 1985, 3398 |
| NruI | TCGCGA | 1 cut(s) | 215 |
| NsiI | ATGCAT | 1 cut(s) | 1479 |
| NspV | TTCGAA | 1 cut(s) | 1101 |
| OliI | CACNNNNGTG | 1 cut(s) | 1355 |
| PaeR7I | CTCGAG | 1 cut(s) | 2102 |
| PagI | TCATGA | 1 cut(s) | 1584 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1522 |
| PctI | GAATGC | 2 cut(s) | 1340, 1676 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1167, 1509, 2845, 3468 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1495, 2150 |
| PfoI | TCCNGGA | 2 cut(s) | 2941, 3204 |
| PkrI | GCNGC | 9 cut(s) | 392, 1533, 1547, 1550, 2126, 2355, 2869, 3006, 3221 |
| PleI | GAGTC | 5 cut(s) | 319, 2445, 3393, 3395, 3474 |
| PpsI | GAGTC | 5 cut(s) | 319, 2445, 3393, 3395, 3474 |
| PshBI | ATTAAT | 1 cut(s) | 2640 |
| PsiI | TTATAA | 2 cut(s) | 513, 2255 |
| Psp124BI | GAGCTC | 2 cut(s) | 183, 1083 |
| Psp6I | CCWGG | 5 cut(s) | 2284, 2360, 2941, 3204, 3418 |
| PspGI | CCWGG | 5 cut(s) | 2284, 2360, 2941, 3204, 3418 |
| PspN4I | GGNNCC | 6 cut(s) | 363, 862, 1735, 2194, 2290, 2445 |
| PspPI | GGNCC | 5 cut(s) | 1486, 1733, 2002, 2193, 3428 |
| PstI | CTGCAG | 1 cut(s) | 141 |
| PsuI | RGATCY | 5 cut(s) | 361, 1213, 1903, 2677, 3070 |
| PvuII | CAGCTG | 1 cut(s) | 1802 |
| RruI | TCGCGA | 1 cut(s) | 215 |
| RsaI | GTAC | 7 cut(s) | 143, 731, 1205, 1234, 2290, 2780, 3332 |
| RsaNI | GTAC | 7 cut(s) | 142, 730, 1204, 1233, 2289, 2779, 3331 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1355, 1563, 2018, 2577 |
| SacI | GAGCTC | 2 cut(s) | 183, 1083 |
| SatI | GCNGC | 9 cut(s) | 391, 1532, 1546, 1549, 2125, 2354, 2868, 3005, 3220 |
| Sau96I | GGNCC | 5 cut(s) | 1486, 1733, 2002, 2193, 3428 |
| SchI | GAGTC | 5 cut(s) | 320, 2446, 3394, 3395, 3474 |
| ScrFI | CCNGG | 6 cut(s) | 1536, 2286, 2362, 2943, 3206, 3420 |
| SduI | GDGCHC | 3 cut(s) | 14, 183, 1083 |
| SfcI | CTRYAG | 1 cut(s) | 137 |
| Sfr274I | CTCGAG | 1 cut(s) | 2102 |
| SfuI | TTCGAA | 1 cut(s) | 1101 |
| SinI | GGWCC | 4 cut(s) | 1486, 2002, 2193, 3428 |
| SlaI | CTCGAG | 1 cut(s) | 2102 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1355, 1563, 2018, 2577 |
| SmlI | CTYRAG | 8 cut(s) | 79, 1076, 1961, 2102, 2128, 2175, 3083, 3482 |
| SmoI | CTYRAG | 8 cut(s) | 79, 1076, 1961, 2102, 2128, 2175, 3083, 3482 |
| SpeI | ACTAGT | 1 cut(s) | 793 |
| SspI | AATATT | 2 cut(s) | 2844, 3395 |
| SstI | GAGCTC | 2 cut(s) | 183, 1083 |
| StyD4I | CCNGG | 6 cut(s) | 1534, 2284, 2360, 2941, 3204, 3418 |
| StyI | CCWWGG | 2 cut(s) | 315, 2471 |
| TaaI | ACNGT | 7 cut(s) | 1623, 1991, 2040, 2484, 2635, 2797, 2998 |
| TaiI | ACGT | 3 cut(s) | 375, 553, 1012 |
| TaqII | GACCGA | 1 cut(s) | 189 |
| TatI | WGTACW | 3 cut(s) | 1203, 1232, 2778 |
| TauI | GCSGC | 3 cut(s) | 1551, 2356, 2870 |
| TscAI | CASTG | 6 cut(s) | 461, 1308, 2025, 2454, 2800, 3001 |
| TseFI | GTSAC | 5 cut(s) | 929, 1088, 1278, 1985, 3398 |
| TseI | GCWGC | 6 cut(s) | 390, 1531, 1545, 2124, 3004, 3219 |
| Tsp45I | GTSAC | 5 cut(s) | 929, 1088, 1278, 1985, 3398 |
| TspRI | CASTG | 6 cut(s) | 461, 1308, 2025, 2454, 2800, 3001 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1495, 2150 |
| VpaK11BI | GGWCC | 4 cut(s) | 1486, 2002, 2193, 3428 |
| VspI | ATTAAT | 1 cut(s) | 2640 |
| XbaI | TCTAGA | 4 cut(s) | 952, 2503, 2518, 2560 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 36, 283, 2282 |
| XhoI | CTCGAG | 1 cut(s) | 2102 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1167, 1509, 2845, 3468 |
| Zsp2I | ATGCAT | 1 cut(s) | 1479 |