TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 189 | 1.3e-51 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 4.8e-17 | TIR domain |
| WHD_ROQ1 | PF23282 | 192 - 244 | 4.5e-06 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 273 - 399 | 5.1e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 342 - 527 | 1.8e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 439 - 512 | 1.8e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1202 |
| AccI | GTMKAC | 2 cut(s) | 342, 1000 |
| AciI | CCGC | 4 cut(s) | 91, 130, 1592, 1649 |
| AclWI | GGATC | 1 cut(s) | 1583 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 5 cut(s) | 963, 970, 1076, 1377, 1498 |
| AcuI | CTGAAG | 5 cut(s) | 21, 58, 402, 1337, 1627 |
| AfaI | GTAC | 6 cut(s) | 500, 684, 806, 913, 1567, 1741 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1410, 1413 |
| AflII | CTTAAG | 2 cut(s) | 902, 1159 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 2 cut(s) | 742, 807 |
| Alw21I | GWGCWC | 1 cut(s) | 14 |
| Alw26I | GTCTC | 7 cut(s) | 352, 473, 563, 693, 949, 1660, 1735 |
| AlwI | GGATC | 1 cut(s) | 1583 |
| AoxI | GGCC | 1 cut(s) | 462 |
| ApeKI | GCWGC | 4 cut(s) | 127, 372, 1050, 1210 |
| ApoI | RAATTY | 5 cut(s) | 963, 970, 1076, 1377, 1498 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 948, 980 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1322 |
| AsuHPI | GGTGA | 1 cut(s) | 1379 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1692, 1724 |
| BbsI | GAAGAC | 1 cut(s) | 474 |
| Bbv12I | GWGCWC | 1 cut(s) | 14 |
| BbvI | GCAGC | 4 cut(s) | 139, 384, 1037, 1222 |
| BccI | CCATC | 3 cut(s) | 191, 471, 943 |
| BciT130I | CCWGG | 2 cut(s) | 744, 809 |
| BcoDI | GTCTC | 7 cut(s) | 352, 473, 563, 693, 949, 1660, 1735 |
| BfaI | CTAG | 6 cut(s) | 555, 720, 1670, 1676, 1683, 1734 |
| BfrI | CTTAAG | 2 cut(s) | 902, 1159 |
| BisI | GCNGC | 5 cut(s) | 128, 131, 373, 1051, 1211 |
| BlsI | GCNGC | 5 cut(s) | 129, 132, 374, 1052, 1212 |
| Bme1390I | CCNGG | 2 cut(s) | 744, 809 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmrFI | CCNGG | 2 cut(s) | 744, 809 |
| BmsI | GCATC | 3 cut(s) | 436, 559, 1641 |
| BoxI | GACNNNNGTC | 1 cut(s) | 727 |
| BpiI | GAAGAC | 1 cut(s) | 474 |
| BpuEI | CTTGAG | 2 cut(s) | 935, 1214 |
| BsaAI | YACGTR | 2 cut(s) | 264, 804 |
| BsaI | GGTCTC | 1 cut(s) | 1735 |
| BsaJI | CCNNGG | 2 cut(s) | 47, 808 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1410, 1413 |
| Bse118I | RCCGGY | 1 cut(s) | 1612 |
| Bse1I | ACTGG | 2 cut(s) | 465, 1695 |
| Bse3DI | GCAATG | 2 cut(s) | 618, 944 |
| BseBI | CCWGG | 2 cut(s) | 744, 809 |
| BseDI | CCNNGG | 2 cut(s) | 47, 808 |
| BseGI | GGATG | 4 cut(s) | 482, 550, 931, 935 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1410, 1413 |
| BseMI | GCAATG | 2 cut(s) | 618, 944 |
| BseMII | CTCAG | 1 cut(s) | 1438 |
| BseNI | ACTGG | 2 cut(s) | 465, 1695 |
| BseRI | GAGGAG | 2 cut(s) | 188, 320 |
| BseXI | GCAGC | 4 cut(s) | 139, 384, 1037, 1222 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 1 cut(s) | 464 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 1613 |
| BslFI | GGGAC | 3 cut(s) | 167, 1693, 1700 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1410, 1413 |
| BsmAI | GTCTC | 7 cut(s) | 352, 473, 563, 693, 949, 1660, 1735 |
| BsmFI | GGGAC | 3 cut(s) | 167, 1693, 1700 |
| BsmI | GAATGC | 2 cut(s) | 302, 1458 |
| BsnI | GGCC | 1 cut(s) | 464 |
| Bso31I | GGTCTC | 1 cut(s) | 1735 |
| Bsp1286I | GDGCHC | 1 cut(s) | 14 |
| Bsp1407I | TGTACA | 1 cut(s) | 682 |
| Bsp143I | GATC | 2 cut(s) | 228, 1588 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspACI | CCGC | 4 cut(s) | 91, 130, 1592, 1649 |
| BspANI | GGCC | 1 cut(s) | 464 |
| BspCNI | CTCAG | 1 cut(s) | 1437 |
| BspPI | GGATC | 1 cut(s) | 1583 |
| BspQI | GCTCTTC | 1 cut(s) | 732 |
| BspTI | CTTAAG | 2 cut(s) | 902, 1159 |
| BspTNI | GGTCTC | 1 cut(s) | 1735 |
| BsrDI | GCAATG | 2 cut(s) | 618, 944 |
| BsrFI | RCCGGY | 1 cut(s) | 1612 |
| BsrGI | TGTACA | 1 cut(s) | 682 |
| BsrI | ACTGG | 2 cut(s) | 465, 1695 |
| BssAI | RCCGGY | 1 cut(s) | 1612 |
| BssECI | CCNNGG | 2 cut(s) | 47, 808 |
| BssMI | GATC | 2 cut(s) | 228, 1588 |
| BssT1I | CCWWGG | 1 cut(s) | 47 |
| Bst2UI | CCWGG | 2 cut(s) | 744, 809 |
| Bst4CI | ACNGT | 4 cut(s) | 282, 537, 599, 1358 |
| Bst6I | CTCTTC | 3 cut(s) | 193, 732, 1333 |
| BstAFI | CTTAAG | 2 cut(s) | 902, 1159 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1638 |
| BstAUI | TGTACA | 1 cut(s) | 682 |
| BstBAI | YACGTR | 2 cut(s) | 264, 804 |
| BstC8I | GCNNGC | 3 cut(s) | 531, 1456, 1614 |
| BstDEI | CTNAG | 4 cut(s) | 285, 833, 1424, 1473 |
| BstDSI | CCRYGG | 1 cut(s) | 47 |
| BstEII | GGTNACC | 1 cut(s) | 1552 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1411 |
| BstF5I | GGATG | 4 cut(s) | 482, 550, 931, 935 |
| BstKTI | GATC | 2 cut(s) | 231, 1591 |
| BstMAI | GTCTC | 7 cut(s) | 352, 473, 563, 693, 949, 1660, 1735 |
| BstMBI | GATC | 2 cut(s) | 228, 1588 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 78, 470, 1474, 1638 |
| BstNI | CCWGG | 2 cut(s) | 744, 809 |
| BstNSI | RCATGY | 1 cut(s) | 706 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 727 |
| BstPI | GGTNACC | 1 cut(s) | 1552 |
| BstSCI | CCNGG | 2 cut(s) | 742, 807 |
| BstSNI | TACGTA | 1 cut(s) | 804 |
| BstV1I | GCAGC | 4 cut(s) | 139, 384, 1037, 1222 |
| BstV2I | GAAGAC | 1 cut(s) | 474 |
| BstX2I | RGATCY | 1 cut(s) | 1588 |
| BstYI | RGATCY | 1 cut(s) | 1588 |
| BsuRI | GGCC | 1 cut(s) | 464 |
| BtgI | CCRYGG | 1 cut(s) | 47 |
| BtgZI | GCGATG | 1 cut(s) | 721 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsCI | GGATG | 4 cut(s) | 482, 550, 931, 935 |
| BtsIMutI | CAGTG | 3 cut(s) | 533, 1651, 1702 |
| Cac8I | GCNNGC | 3 cut(s) | 531, 1456, 1614 |
| Cfr10I | RCCGGY | 1 cut(s) | 1612 |
| CseI | GACGC | 1 cut(s) | 759 |
| Csp6I | GTAC | 6 cut(s) | 499, 683, 805, 912, 1566, 1740 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| CviAII | CATG | 7 cut(s) | 48, 301, 353, 398, 703, 785, 1215 |
| CviQI | GTAC | 6 cut(s) | 499, 683, 805, 912, 1566, 1740 |
| DdeI | CTNAG | 4 cut(s) | 285, 833, 1424, 1473 |
| DpnI | GATC | 2 cut(s) | 230, 1590 |
| DpnII | GATC | 2 cut(s) | 228, 1588 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 3 cut(s) | 193, 732, 1333 |
| EarI | CTCTTC | 3 cut(s) | 193, 732, 1333 |
| EciI | GGCGGA | 1 cut(s) | 1581 |
| Eco105I | TACGTA | 1 cut(s) | 804 |
| Eco130I | CCWWGG | 1 cut(s) | 47 |
| Eco31I | GGTCTC | 1 cut(s) | 1735 |
| Eco57I | CTGAAG | 5 cut(s) | 21, 58, 402, 1337, 1627 |
| Eco91I | GGTNACC | 1 cut(s) | 1552 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1411 |
| EcoO65I | GGTNACC | 1 cut(s) | 1552 |
| EcoRII | CCWGG | 2 cut(s) | 742, 807 |
| EcoT14I | CCWWGG | 1 cut(s) | 47 |
| EcoT22I | ATGCAT | 1 cut(s) | 302 |
| ErhI | CCWWGG | 1 cut(s) | 47 |
| FaeI | CATG | 7 cut(s) | 51, 304, 356, 401, 706, 788, 1218 |
| FaqI | GGGAC | 3 cut(s) | 167, 1693, 1700 |
| FatI | CATG | 7 cut(s) | 47, 300, 352, 397, 702, 784, 1214 |
| FauI | CCCGC | 1 cut(s) | 98 |
| FblI | GTMKAC | 2 cut(s) | 342, 1000 |
| Fnu4HI | GCNGC | 5 cut(s) | 128, 131, 373, 1051, 1211 |
| FokI | GGATG | 4 cut(s) | 489, 537, 918, 922 |
| Fsp4HI | GCNGC | 5 cut(s) | 128, 131, 373, 1051, 1211 |
| FspBI | CTAG | 6 cut(s) | 555, 720, 1670, 1676, 1683, 1734 |
| GluI | GCNGC | 5 cut(s) | 128, 131, 373, 1051, 1211 |
| HaeIII | GGCC | 1 cut(s) | 464 |
| HapII | CCGG | 1 cut(s) | 1613 |
| HgaI | GACGC | 1 cut(s) | 759 |
| Hin1II | CATG | 7 cut(s) | 51, 304, 356, 401, 706, 788, 1218 |
| HindIII | AAGCTT | 3 cut(s) | 1106, 1475, 1508 |
| HinfI | GANTC | 9 cut(s) | 138, 728, 928, 957, 997, 1069, 1237, 1276, 1291 |
| HpaII | CCGG | 1 cut(s) | 1613 |
| HphI | GGTGA | 1 cut(s) | 1379 |
| Hpy166II | GTNNAC | 4 cut(s) | 343, 683, 749, 1001 |
| Hpy188I | TCNGA | 4 cut(s) | 77, 193, 604, 667 |
| Hpy188III | TCNNGA | 6 cut(s) | 142, 887, 952, 1028, 1073, 1586 |
| Hpy8I | GTNNAC | 4 cut(s) | 343, 683, 749, 1001 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 1749 |
| HpyAV | CCTTC | 6 cut(s) | 410, 428, 1152, 1266, 1364, 1457 |
| HpyCH4III | ACNGT | 4 cut(s) | 282, 537, 599, 1358 |
| HpyCH4IV | ACGT | 5 cut(s) | 60, 263, 606, 803, 1483 |
| HpyCH4V | TGCA | 9 cut(s) | 127, 300, 529, 550, 612, 623, 674, 984, 1522 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 78, 470, 1474, 1638 |
| HpyF3I | CTNAG | 4 cut(s) | 285, 833, 1424, 1473 |
| HpySE526I | ACGT | 5 cut(s) | 60, 263, 606, 803, 1483 |
| Hsp92II | CATG | 7 cut(s) | 51, 304, 356, 401, 706, 788, 1218 |
| KroI | GCCGGC | 1 cut(s) | 1612 |
| KroNI | GCCGGC | 1 cut(s) | 1614 |
| Kzo9I | GATC | 2 cut(s) | 228, 1588 |
| LguI | GCTCTTC | 1 cut(s) | 732 |
| LmnI | GCTCC | 3 cut(s) | 540, 1177, 1223 |
| Lsp1109I | GCAGC | 4 cut(s) | 139, 384, 1037, 1222 |
| LweI | GCATC | 3 cut(s) | 436, 559, 1641 |
| MaeI | CTAG | 6 cut(s) | 555, 720, 1670, 1676, 1683, 1734 |
| MaeII | ACGT | 5 cut(s) | 60, 263, 606, 803, 1483 |
| MaeIII | GTNAC | 3 cut(s) | 836, 1538, 1552 |
| MalI | GATC | 2 cut(s) | 230, 1590 |
| MboI | GATC | 2 cut(s) | 228, 1588 |
| MboII | GAAGA | 5 cut(s) | 180, 404, 474, 749, 1320 |
| MfeI | CAATTG | 4 cut(s) | 1149, 1517, 1561, 1636 |
| MflI | RGATCY | 1 cut(s) | 1588 |
| MhlI | GDGCHC | 1 cut(s) | 14 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 4 cut(s) | 737, 951, 1006, 1285 |
| MmeI | TCCRAC | 2 cut(s) | 1155, 1398 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 1 cut(s) | 302 |
| MroNI | GCCGGC | 1 cut(s) | 1612 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1322 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspA1I | CMGCKG | 1 cut(s) | 130 |
| MspCI | CTTAAG | 2 cut(s) | 902, 1159 |
| MspI | CCGG | 1 cut(s) | 1613 |
| MspR9I | CCNGG | 2 cut(s) | 744, 809 |
| MunI | CAATTG | 4 cut(s) | 1149, 1517, 1561, 1636 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 1458 |
| MvaI | CCWGG | 2 cut(s) | 744, 809 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 78, 470, 1474, 1638 |
| NaeI | GCCGGC | 1 cut(s) | 1614 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NdeII | GATC | 2 cut(s) | 228, 1588 |
| NgoMIV | GCCGGC | 1 cut(s) | 1612 |
| NlaIII | CATG | 7 cut(s) | 51, 304, 356, 401, 706, 788, 1218 |
| NmuCI | GTSAC | 1 cut(s) | 1538 |
| NsiI | ATGCAT | 1 cut(s) | 302 |
| NspI | RCATGY | 1 cut(s) | 706 |
| PciSI | GCTCTTC | 1 cut(s) | 732 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 224, 703 |
| PctI | GAATGC | 2 cut(s) | 302, 1458 |
| PdiI | GCCGGC | 1 cut(s) | 1614 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1322 |
| PfeI | GAWTC | 5 cut(s) | 138, 928, 1069, 1237, 1291 |
| PflFI | GACNNNGTC | 1 cut(s) | 753 |
| PkrI | GCNGC | 5 cut(s) | 129, 132, 374, 1052, 1212 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 4 cut(s) | 736, 951, 1005, 1284 |
| PpsI | GAGTC | 4 cut(s) | 736, 951, 1005, 1284 |
| Ppu21I | YACGTR | 2 cut(s) | 264, 804 |
| PshAI | GACNNNNGTC | 1 cut(s) | 727 |
| PsiI | TTATAA | 1 cut(s) | 1202 |
| Psp6I | CCWGG | 2 cut(s) | 742, 807 |
| PspEI | GGTNACC | 1 cut(s) | 1552 |
| PspGI | CCWGG | 2 cut(s) | 742, 807 |
| PsuI | RGATCY | 1 cut(s) | 1588 |
| PsyI | GACNNNGTC | 1 cut(s) | 753 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RsaI | GTAC | 6 cut(s) | 500, 684, 806, 913, 1567, 1741 |
| RsaNI | GTAC | 6 cut(s) | 499, 683, 805, 912, 1566, 1740 |
| SapI | GCTCTTC | 1 cut(s) | 732 |
| SatI | GCNGC | 5 cut(s) | 128, 131, 373, 1051, 1211 |
| Sau3AI | GATC | 2 cut(s) | 228, 1588 |
| SchI | GAGTC | 4 cut(s) | 737, 951, 1006, 1285 |
| ScrFI | CCNGG | 2 cut(s) | 744, 809 |
| SduI | GDGCHC | 1 cut(s) | 14 |
| SfaNI | GCATC | 3 cut(s) | 436, 559, 1641 |
| SmlI | CTYRAG | 4 cut(s) | 902, 950, 1159, 1229 |
| SmoI | CTYRAG | 4 cut(s) | 902, 950, 1159, 1229 |
| SnaBI | TACGTA | 1 cut(s) | 804 |
| SsiI | CCGC | 4 cut(s) | 91, 130, 1592, 1649 |
| SspI | AATATT | 1 cut(s) | 1035 |
| SspMI | CTAG | 6 cut(s) | 555, 720, 1670, 1676, 1683, 1734 |
| StyD4I | CCNGG | 2 cut(s) | 742, 807 |
| StyI | CCWWGG | 1 cut(s) | 47 |
| TaaI | ACNGT | 4 cut(s) | 282, 537, 599, 1358 |
| TaiI | ACGT | 5 cut(s) | 63, 266, 609, 806, 1486 |
| TaqI | TCGA | 3 cut(s) | 218, 1513, 1744 |
| TatI | WGTACW | 3 cut(s) | 682, 1565, 1739 |
| TauI | GCSGC | 1 cut(s) | 133 |
| TfiI | GAWTC | 5 cut(s) | 138, 928, 1069, 1237, 1291 |
| TscAI | CASTG | 3 cut(s) | 540, 1651, 1702 |
| TseFI | GTSAC | 1 cut(s) | 1538 |
| TseI | GCWGC | 4 cut(s) | 127, 372, 1050, 1210 |
| Tsp45I | GTSAC | 1 cut(s) | 1538 |
| TspDTI | ATGAA | 8 cut(s) | 651, 750, 773, 920, 1106, 1134, 1206, 1451 |
| TspRI | CASTG | 3 cut(s) | 540, 1651, 1702 |
| Tth111I | GACNNNGTC | 1 cut(s) | 753 |
| Vha464I | CTTAAG | 2 cut(s) | 902, 1159 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1411 |
| XapI | RAATTY | 5 cut(s) | 963, 970, 1076, 1377, 1498 |
| XceI | RCATGY | 1 cut(s) | 706 |
| XmiI | GTMKAC | 2 cut(s) | 342, 1000 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1322 |
| XspI | CTAG | 6 cut(s) | 555, 720, 1670, 1676, 1683, 1734 |
| Zsp2I | ATGCAT | 1 cut(s) | 302 |