TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 12 - 180 | 1.6e-46 | TIR domain |
| TIR_2 | PF13676 | 15 - 108 | 7.1e-09 | TIR domain |
| NB-ARC | PF00931 | 197 - 352 | 2.4e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 420 - 490 | 2.3e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 659 - 781 | 8.5e-17 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 751 - 837 | 1.8e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 818 - 875 | 1.6e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 837 - 1002 | 2.6e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 906 - 1017 | 3.4e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 1038 - 1183 | 5.3e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 600, 1518 |
| AccB1I | GGYRCC | 2 cut(s) | 2141, 3378 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1441 |
| AccBSI | CCGCTC | 1 cut(s) | 656 |
| AccI | GTMKAC | 1 cut(s) | 2863 |
| AccII | CGCG | 1 cut(s) | 2329 |
| AciI | CCGC | 7 cut(s) | 601, 627, 656, 1459, 1898, 3545, 3574 |
| AclWI | GGATC | 4 cut(s) | 134, 296, 2775, 3363 |
| AcoI | YGGCCR | 2 cut(s) | 2730, 3288 |
| AcuI | CTGAAG | 2 cut(s) | 1086, 2912 |
| AcyI | GRCGYC | 2 cut(s) | 597, 1515 |
| AdeI | CACNNNGTG | 1 cut(s) | 225 |
| AfaI | GTAC | 8 cut(s) | 585, 1137, 1332, 1930, 2031, 3067, 3137, 3646 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 822, 1441, 3151, 3256 |
| AflIII | ACRYGT | 2 cut(s) | 1522, 1779 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2995 |
| AjnI | CCWGG | 6 cut(s) | 1480, 1951, 3112, 3181, 3253, 3302 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 522, 554, 900, 932, 2613, 2645 |
| AleI | CACNNNNGTG | 1 cut(s) | 3147 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1356, 1388 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 17, 3319 |
| Alw26I | GTCTC | 3 cut(s) | 708, 740, 1121 |
| AlwI | GGATC | 4 cut(s) | 134, 296, 2775, 3363 |
| AoxI | GGCC | 4 cut(s) | 2317, 2730, 3288, 3604 |
| ApeKI | GCWGC | 6 cut(s) | 280, 812, 2919, 2973, 2976, 3632 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2689, 2721 |
| AseI | ATTAAT | 2 cut(s) | 3482, 3591 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 366, 1046, 1074, 1274, 1686, 1803, 2187 |
| AspLEI | GCGC | 2 cut(s) | 1491, 2329 |
| AspS9I | GGNCC | 4 cut(s) | 1716, 2317, 3110, 3725 |
| AsuC2I | CCSGG | 2 cut(s) | 1463, 1720 |
| AsuHPI | GGTGA | 5 cut(s) | 12, 340, 1609, 1615, 3134 |
| AvaII | GGWCC | 3 cut(s) | 1716, 3110, 3725 |
| BaeGI | GKGCMC | 1 cut(s) | 3381 |
| BalI | TGGCCA | 1 cut(s) | 2732 |
| BanI | GGYRCC | 2 cut(s) | 2141, 3378 |
| BanII | GRGCYC | 1 cut(s) | 17 |
| BauI | CACGAG | 1 cut(s) | 2222 |
| BbsI | GAAGAC | 6 cut(s) | 1417, 1518, 1679, 2214, 2435, 2594 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 17, 3319 |
| BbvI | GCAGC | 6 cut(s) | 267, 824, 2906, 2963, 2985, 3644 |
| BccI | CCATC | 8 cut(s) | 99, 1241, 1750, 2596, 3013, 3199, 3380, 3392 |
| BceAI | ACGGC | 1 cut(s) | 3303 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2203, 2237, 2706, 2740 |
| BciT130I | CCWGG | 6 cut(s) | 1482, 1953, 3114, 3183, 3255, 3304 |
| BciVI | GTATCC | 2 cut(s) | 61, 1734 |
| BclI | TGATCA | 1 cut(s) | 1335 |
| BcnI | CCSGG | 2 cut(s) | 1463, 1720 |
| BcoDI | GTCTC | 3 cut(s) | 708, 740, 1121 |
| BfmI | CTRYAG | 2 cut(s) | 2779, 3168 |
| BfuI | GTATCC | 2 cut(s) | 61, 1734 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1486 |
| BglII | AGATCT | 3 cut(s) | 1162, 1385, 2218 |
| BisI | GCNGC | 7 cut(s) | 281, 813, 1898, 2920, 2974, 2977, 3633 |
| BlsI | GCNGC | 7 cut(s) | 282, 814, 1899, 2921, 2975, 2978, 3634 |
| BmcAI | AGTACT | 3 cut(s) | 1137, 1332, 3646 |
| Bme1390I | CCNGG | 8 cut(s) | 1463, 1482, 1720, 1953, 3114, 3183, 3255, 3304 |
| Bme18I | GGWCC | 3 cut(s) | 1716, 3110, 3725 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2995 |
| BmgT120I | GGNCC | 4 cut(s) | 1716, 2317, 3110, 3725 |
| BmiI | GGNNCC | 4 cut(s) | 1664, 2143, 3380, 3521 |
| BmrFI | CCNGG | 8 cut(s) | 1463, 1482, 1720, 1953, 3114, 3183, 3255, 3304 |
| BmrI | ACTGGG | 1 cut(s) | 2793 |
| BmuI | ACTGGG | 1 cut(s) | 2793 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2103, 2781 |
| BpiI | GAAGAC | 6 cut(s) | 1417, 1518, 1679, 2214, 2435, 2594 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 391, 423, 656, 688, 658, 690, 1843, 1875 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| Bpu10I | CCTNAGC | 1 cut(s) | 144 |
| BpuEI | CTTGAG | 7 cut(s) | 535, 1673, 1925, 2437, 2459, 3224, 3728 |
| BpuMI | CCSGG | 2 cut(s) | 1463, 1720 |
| BsaAI | YACGTR | 1 cut(s) | 2033 |
| BsaBI | GATNNNNATC | 1 cut(s) | 300 |
| BsaHI | GRCGYC | 2 cut(s) | 597, 1515 |
| BsaI | GGTCTC | 2 cut(s) | 740, 1121 |
| BsaJI | CCNNGG | 4 cut(s) | 26, 1951, 3254, 3303 |
| BsaWI | WCCGGW | 1 cut(s) | 2092 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1581, 1611 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 822, 1441, 3151, 3256 |
| Bse118I | RCCGGY | 1 cut(s) | 2144 |
| Bse1I | ACTGG | 6 cut(s) | 563, 1546, 1718, 2769, 2799, 3658 |
| Bse3DI | GCAATG | 2 cut(s) | 2933, 3586 |
| Bse8I | GATNNNNATC | 1 cut(s) | 300 |
| BseBI | CCWGG | 6 cut(s) | 1482, 1953, 3114, 3183, 3255, 3304 |
| BseDI | CCNNGG | 4 cut(s) | 26, 1951, 3254, 3303 |
| BseJI | GATNNNNATC | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 822, 1441, 3151, 3256 |
| BseMI | GCAATG | 2 cut(s) | 2933, 3586 |
| BseMII | CTCAG | 5 cut(s) | 135, 1572, 1749, 1841, 2859 |
| BseNI | ACTGG | 6 cut(s) | 563, 1546, 1718, 2769, 2799, 3658 |
| BseRI | GAGGAG | 6 cut(s) | 15, 838, 2138, 2324, 3227, 3563 |
| BseSI | GKGCMC | 1 cut(s) | 3381 |
| BseXI | GCAGC | 6 cut(s) | 267, 824, 2906, 2963, 2985, 3644 |
| Bsh1236I | CGCG | 1 cut(s) | 2329 |
| BshFI | GGCC | 4 cut(s) | 2319, 2732, 3290, 3606 |
| BshNI | GGYRCC | 2 cut(s) | 2141, 3378 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 17, 3319 |
| BsiSI | CCGG | 7 cut(s) | 1039, 1462, 1719, 2093, 2145, 2519, 2714 |
| BsiWI | CGTACG | 1 cut(s) | 583 |
| BslFI | GGGAC | 1 cut(s) | 2368 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 822, 1441, 3151, 3256 |
| BsmAI | GTCTC | 3 cut(s) | 708, 740, 1121 |
| BsmFI | GGGAC | 1 cut(s) | 2368 |
| BsmI | GAATGC | 5 cut(s) | 260, 1046, 1612, 2181, 2749 |
| BsnI | GGCC | 4 cut(s) | 2319, 2732, 3290, 3606 |
| Bso31I | GGTCTC | 2 cut(s) | 740, 1121 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 17, 3319, 3381 |
| Bsp1407I | TGTACA | 1 cut(s) | 1928 |
| BspACI | CCGC | 7 cut(s) | 601, 627, 656, 1459, 1898, 3545, 3574 |
| BspANI | GGCC | 4 cut(s) | 2319, 2732, 3290, 3606 |
| BspCNI | CTCAG | 5 cut(s) | 136, 1573, 1750, 1842, 2860 |
| BspFNI | CGCG | 1 cut(s) | 2329 |
| BspHI | TCATGA | 3 cut(s) | 355, 676, 802 |
| BspLI | GGNNCC | 4 cut(s) | 1664, 2143, 3380, 3521 |
| BspMAI | CTGCAG | 1 cut(s) | 2783 |
| BspPI | GGATC | 4 cut(s) | 134, 296, 2775, 3363 |
| BspQI | GCTCTTC | 1 cut(s) | 22 |
| BspT107I | GGYRCC | 2 cut(s) | 2141, 3378 |
| BspTNI | GGTCTC | 2 cut(s) | 740, 1121 |
| BsrBI | CCGCTC | 1 cut(s) | 656 |
| BsrDI | GCAATG | 2 cut(s) | 2933, 3586 |
| BsrFI | RCCGGY | 1 cut(s) | 2144 |
| BsrGI | TGTACA | 1 cut(s) | 1928 |
| BsrI | ACTGG | 6 cut(s) | 563, 1546, 1718, 2769, 2799, 3658 |
| BssAI | RCCGGY | 1 cut(s) | 2144 |
| BssECI | CCNNGG | 4 cut(s) | 26, 1951, 3254, 3303 |
| BssNI | GRCGYC | 2 cut(s) | 597, 1515 |
| BssSI | CACGAG | 1 cut(s) | 2222 |
| Bst2BI | CACGAG | 1 cut(s) | 2222 |
| Bst2UI | CCWGG | 6 cut(s) | 1482, 1953, 3114, 3183, 3255, 3304 |
| Bst6I | CTCTTC | 6 cut(s) | 22, 903, 1153, 1257, 2331, 3663 |
| BstACI | GRCGYC | 2 cut(s) | 597, 1515 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 182, 1429, 3656 |
| BstAUI | TGTACA | 1 cut(s) | 1928 |
| BstBAI | YACGTR | 1 cut(s) | 2033 |
| BstC8I | GCNNGC | 5 cut(s) | 1487, 2023, 2390, 2924, 3586 |
| BstDEI | CTNAG | 9 cut(s) | 144, 1166, 1581, 1758, 1850, 2076, 2771, 2868, 3146 |
| BstEII | GGTNACC | 1 cut(s) | 1058 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 820 |
| BstFNI | CGCG | 1 cut(s) | 2329 |
| BstHHI | GCGC | 2 cut(s) | 1491, 2329 |
| BstMAI | GTCTC | 3 cut(s) | 708, 740, 1121 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 12, 182, 1429, 1486, 1791, 1906, 2385, 3585, 3656 |
| BstNI | CCWGG | 6 cut(s) | 1482, 1953, 3114, 3183, 3255, 3304 |
| BstNSI | RCATGY | 3 cut(s) | 1526, 1783, 2392 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2103, 2781 |
| BstPI | GGTNACC | 1 cut(s) | 1058 |
| BstSCI | CCNGG | 8 cut(s) | 1461, 1480, 1718, 1951, 3112, 3181, 3253, 3302 |
| BstSFI | CTRYAG | 2 cut(s) | 2779, 3168 |
| BstSLI | GKGCMC | 1 cut(s) | 3381 |
| BstUI | CGCG | 1 cut(s) | 2329 |
| BstV1I | GCAGC | 6 cut(s) | 267, 824, 2906, 2963, 2985, 3644 |
| BstV2I | GAAGAC | 6 cut(s) | 1417, 1518, 1679, 2214, 2435, 2594 |
| BstX2I | RGATCY | 4 cut(s) | 1162, 1385, 2218, 2767 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3743 |
| BstYI | RGATCY | 4 cut(s) | 1162, 1385, 2218, 2767 |
| BsuI | GTATCC | 2 cut(s) | 61, 1734 |
| BsuRI | GGCC | 4 cut(s) | 2319, 2732, 3290, 3606 |
| BtsI | GCAGTG | 2 cut(s) | 99, 2032 |
| BtsIMutI | CAGTG | 6 cut(s) | 99, 1186, 2032, 2806, 3310, 3391 |
| Cac8I | GCNNGC | 5 cut(s) | 1487, 2023, 2390, 2924, 3586 |
| CciI | TCATGA | 3 cut(s) | 355, 676, 802 |
| CfoI | GCGC | 2 cut(s) | 1491, 2329 |
| Cfr10I | RCCGGY | 1 cut(s) | 2144 |
| Cfr13I | GGNCC | 4 cut(s) | 1716, 2317, 3110, 3725 |
| Csp6I | GTAC | 8 cut(s) | 584, 1136, 1331, 1929, 2030, 3066, 3136, 3645 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2223, 2258 |
| CviQI | GTAC | 8 cut(s) | 584, 1136, 1331, 1929, 2030, 3066, 3136, 3645 |
| DdeI | CTNAG | 9 cut(s) | 144, 1166, 1581, 1758, 1850, 2076, 2771, 2868, 3146 |
| DraI | TTTAAA | 2 cut(s) | 1888, 3700 |
| DraIII | CACNNNGTG | 1 cut(s) | 225 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2995 |
| EaeI | YGGCCR | 2 cut(s) | 2730, 3288 |
| Eam1104I | CTCTTC | 6 cut(s) | 22, 903, 1153, 1257, 2331, 3663 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2995 |
| EarI | CTCTTC | 6 cut(s) | 22, 903, 1153, 1257, 2331, 3663 |
| EciI | GGCGGA | 1 cut(s) | 1448 |
| Ecl136II | GAGCTC | 1 cut(s) | 15 |
| Eco147I | AGGCCT | 1 cut(s) | 3606 |
| Eco24I | GRGCYC | 1 cut(s) | 17 |
| Eco31I | GGTCTC | 2 cut(s) | 740, 1121 |
| Eco32I | GATATC | 1 cut(s) | 3430 |
| Eco47I | GGWCC | 3 cut(s) | 1716, 3110, 3725 |
| Eco53kI | GAGCTC | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 2 cut(s) | 1086, 2912 |
| Eco91I | GGTNACC | 1 cut(s) | 1058 |
| EcoICRI | GAGCTC | 1 cut(s) | 15 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 820 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3725 |
| EcoO65I | GGTNACC | 1 cut(s) | 1058 |
| EcoRI | GAATTC | 3 cut(s) | 439, 2621, 3446 |
| EcoRII | CCWGG | 6 cut(s) | 1480, 1951, 3112, 3181, 3253, 3302 |
| EcoRV | GATATC | 1 cut(s) | 3430 |
| EcoT22I | ATGCAT | 1 cut(s) | 260 |
| EcoT38I | GRGCYC | 1 cut(s) | 17 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1062, 1094 |
| FaqI | GGGAC | 1 cut(s) | 2368 |
| FauI | CCCGC | 1 cut(s) | 620 |
| FbaI | TGATCA | 1 cut(s) | 1335 |
| FblI | GTMKAC | 1 cut(s) | 2863 |
| Fnu4HI | GCNGC | 7 cut(s) | 281, 813, 1898, 2920, 2974, 2977, 3633 |
| FriOI | GRGCYC | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 7 cut(s) | 281, 813, 1898, 2920, 2974, 2977, 3633 |
| GlaI | GCGC | 2 cut(s) | 1490, 2328 |
| GluI | GCNGC | 7 cut(s) | 281, 813, 1898, 2920, 2974, 2977, 3633 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HaeIII | GGCC | 4 cut(s) | 2319, 2732, 3290, 3606 |
| HapII | CCGG | 7 cut(s) | 1039, 1462, 1719, 2093, 2145, 2519, 2714 |
| HhaI | GCGC | 2 cut(s) | 1491, 2329 |
| Hin1I | GRCGYC | 2 cut(s) | 597, 1515 |
| Hin6I | GCGC | 2 cut(s) | 1489, 2327 |
| HinP1I | GCGC | 2 cut(s) | 1489, 2327 |
| HincII | GTYRAC | 5 cut(s) | 1873, 2826, 3028, 3344, 3715 |
| HindII | GTYRAC | 5 cut(s) | 1873, 2826, 3028, 3344, 3715 |
| HindIII | AAGCTT | 6 cut(s) | 2078, 2291, 2504, 2552, 2924, 3440 |
| HpaI | GTTAAC | 2 cut(s) | 2826, 3028 |
| HpaII | CCGG | 7 cut(s) | 1039, 1462, 1719, 2093, 2145, 2519, 2714 |
| HphI | GGTGA | 5 cut(s) | 12, 340, 1609, 1615, 3134 |
| Hpy188I | TCNGA | 6 cut(s) | 310, 774, 855, 1851, 1863, 2607 |
| Hpy99I | CGWCG | 1 cut(s) | 1732 |
| HpyCH4IV | ACGT | 4 cut(s) | 582, 597, 1515, 2032 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 12, 182, 1429, 1486, 1791, 1906, 2385, 3585, 3656 |
| HpyF3I | CTNAG | 9 cut(s) | 144, 1166, 1581, 1758, 1850, 2076, 2771, 2868, 3146 |
| HpySE526I | ACGT | 4 cut(s) | 582, 597, 1515, 2032 |
| Hsp92I | GRCGYC | 2 cut(s) | 597, 1515 |
| HspAI | GCGC | 2 cut(s) | 1489, 2327 |
| Ksp22I | TGATCA | 1 cut(s) | 1335 |
| KspAI | GTTAAC | 2 cut(s) | 2826, 3028 |
| LguI | GCTCTTC | 1 cut(s) | 22 |
| LmnI | GCTCC | 6 cut(s) | 330, 809, 1437, 2125, 3550, 3576 |
| Lsp1109I | GCAGC | 6 cut(s) | 267, 824, 2906, 2963, 2985, 3644 |
| MaeII | ACGT | 4 cut(s) | 582, 597, 1515, 2032 |
| MbiI | CCGCTC | 1 cut(s) | 656 |
| MfeI | CAATTG | 1 cut(s) | 2382 |
| MflI | RGATCY | 4 cut(s) | 1162, 1385, 2218, 2767 |
| MhlI | GDGCHC | 4 cut(s) | 8, 17, 3319, 3381 |
| MlsI | TGGCCA | 1 cut(s) | 2732 |
| MluNI | TGGCCA | 1 cut(s) | 2732 |
| MlyI | GAGTC | 4 cut(s) | 710, 1568, 1861, 3228 |
| MmeI | TCCRAC | 4 cut(s) | 520, 1791, 2972, 3333 |
| Mox20I | TGGCCA | 1 cut(s) | 2732 |
| Mph1103I | ATGCAT | 1 cut(s) | 260 |
| MroXI | GAANNNNTTC | 7 cut(s) | 366, 1046, 1074, 1274, 1686, 1803, 2187 |
| MscI | TGGCCA | 1 cut(s) | 2732 |
| MslI | CAYNNNNRTG | 4 cut(s) | 3147, 3384, 3396, 3618 |
| Msp20I | TGGCCA | 1 cut(s) | 2732 |
| MspA1I | CMGCKG | 1 cut(s) | 2976 |
| MspI | CCGG | 7 cut(s) | 1039, 1462, 1719, 2093, 2145, 2519, 2714 |
| MspR9I | CCNGG | 8 cut(s) | 1463, 1482, 1720, 1953, 3114, 3183, 3255, 3304 |
| MunI | CAATTG | 1 cut(s) | 2382 |
| Mva1269I | GAATGC | 5 cut(s) | 260, 1046, 1612, 2181, 2749 |
| MvaI | CCWGG | 6 cut(s) | 1482, 1953, 3114, 3183, 3255, 3304 |
| MvnI | CGCG | 1 cut(s) | 2329 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 12, 182, 1429, 1486, 1791, 1906, 2385, 3585, 3656 |
| NciI | CCSGG | 2 cut(s) | 1463, 1720 |
| NlaIV | GGNNCC | 4 cut(s) | 1664, 2143, 3380, 3521 |
| NmuCI | GTSAC | 8 cut(s) | 836, 1853, 2649, 2705, 2774, 3308, 3401, 3731 |
| NsiI | ATGCAT | 1 cut(s) | 260 |
| NspI | RCATGY | 3 cut(s) | 1526, 1783, 2392 |
| OliI | CACNNNNGTG | 1 cut(s) | 3147 |
| PaeI | GCATGC | 1 cut(s) | 2392 |
| PagI | TCATGA | 3 cut(s) | 355, 676, 802 |
| PceI | AGGCCT | 1 cut(s) | 3606 |
| PciI | ACATGT | 2 cut(s) | 1522, 1779 |
| PciSI | GCTCTTC | 1 cut(s) | 22 |
| PctI | GAATGC | 5 cut(s) | 260, 1046, 1612, 2181, 2749 |
| PdmI | GAANNNNTTC | 7 cut(s) | 366, 1046, 1074, 1274, 1686, 1803, 2187 |
| Pfl23II | CGTACG | 1 cut(s) | 583 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1441 |
| PfoI | TCCNGGA | 1 cut(s) | 3112 |
| PkrI | GCNGC | 7 cut(s) | 282, 814, 1899, 2921, 2975, 2978, 3634 |
| PleI | GAGTC | 4 cut(s) | 710, 1568, 1860, 3228 |
| PpsI | GAGTC | 4 cut(s) | 710, 1568, 1860, 3228 |
| Ppu21I | YACGTR | 1 cut(s) | 2033 |
| PpuMI | RGGWCCY | 1 cut(s) | 3725 |
| PscI | ACATGT | 2 cut(s) | 1522, 1779 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2103, 2781 |
| PshBI | ATTAAT | 2 cut(s) | 3482, 3591 |
| Psp124BI | GAGCTC | 1 cut(s) | 17 |
| Psp5II | RGGWCCY | 1 cut(s) | 3725 |
| Psp6I | CCWGG | 6 cut(s) | 1480, 1951, 3112, 3181, 3253, 3302 |
| PspEI | GGTNACC | 1 cut(s) | 1058 |
| PspGI | CCWGG | 6 cut(s) | 1480, 1951, 3112, 3181, 3253, 3302 |
| PspLI | CGTACG | 1 cut(s) | 583 |
| PspN4I | GGNNCC | 4 cut(s) | 1664, 2143, 3380, 3521 |
| PspPI | GGNCC | 4 cut(s) | 1716, 2317, 3110, 3725 |
| PspPPI | RGGWCCY | 1 cut(s) | 3725 |
| PstI | CTGCAG | 1 cut(s) | 2783 |
| PsuI | RGATCY | 4 cut(s) | 1162, 1385, 2218, 2767 |
| PvuII | CAGCTG | 1 cut(s) | 2976 |
| RsaI | GTAC | 8 cut(s) | 585, 1137, 1332, 1930, 2031, 3067, 3137, 3646 |
| RsaNI | GTAC | 8 cut(s) | 584, 1136, 1331, 1929, 2030, 3066, 3136, 3645 |
| RseI | CAYNNNNRTG | 4 cut(s) | 3147, 3384, 3396, 3618 |
| SacI | GAGCTC | 1 cut(s) | 17 |
| SapI | GCTCTTC | 1 cut(s) | 22 |
| SatI | GCNGC | 7 cut(s) | 281, 813, 1898, 2920, 2974, 2977, 3633 |
| Sau96I | GGNCC | 4 cut(s) | 1716, 2317, 3110, 3725 |
| ScaI | AGTACT | 3 cut(s) | 1137, 1332, 3646 |
| SchI | GAGTC | 4 cut(s) | 710, 1568, 1861, 3228 |
| ScrFI | CCNGG | 8 cut(s) | 1463, 1482, 1720, 1953, 3114, 3183, 3255, 3304 |
| SduI | GDGCHC | 4 cut(s) | 8, 17, 3319, 3381 |
| SfcI | CTRYAG | 2 cut(s) | 2779, 3168 |
| SinI | GGWCC | 3 cut(s) | 1716, 3110, 3725 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 3147, 3384, 3396, 3618 |
| SmlI | CTYRAG | 7 cut(s) | 550, 1652, 1904, 2416, 2474, 3239, 3707 |
| SmoI | CTYRAG | 7 cut(s) | 550, 1652, 1904, 2416, 2474, 3239, 3707 |
| SphI | GCATGC | 1 cut(s) | 2392 |
| SseBI | AGGCCT | 1 cut(s) | 3606 |
| SsiI | CCGC | 7 cut(s) | 601, 627, 656, 1459, 1898, 3545, 3574 |
| SspI | AATATT | 3 cut(s) | 893, 1275, 3271 |
| SstI | GAGCTC | 1 cut(s) | 17 |
| StuI | AGGCCT | 1 cut(s) | 3606 |
| StyD4I | CCNGG | 8 cut(s) | 1461, 1480, 1718, 1951, 3112, 3181, 3253, 3302 |
| TaiI | ACGT | 4 cut(s) | 585, 600, 1518, 2035 |
| TaqI | TCGA | 6 cut(s) | 73, 300, 969, 1318, 1622, 1730 |
| TatI | WGTACW | 5 cut(s) | 1135, 1330, 1928, 3065, 3644 |
| TauI | GCSGC | 1 cut(s) | 1900 |
| TscAI | CASTG | 6 cut(s) | 106, 1186, 2032, 2806, 3317, 3398 |
| TseFI | GTSAC | 8 cut(s) | 836, 1853, 2649, 2705, 2774, 3308, 3401, 3731 |
| TseI | GCWGC | 6 cut(s) | 280, 812, 2919, 2973, 2976, 3632 |
| Tsp45I | GTSAC | 8 cut(s) | 836, 1853, 2649, 2705, 2774, 3308, 3401, 3731 |
| TspGWI | ACGGA | 5 cut(s) | 709, 1716, 1717, 1797, 3512 |
| TspRI | CASTG | 6 cut(s) | 106, 1186, 2032, 2806, 3317, 3398 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1441 |
| VpaK11BI | GGWCC | 3 cut(s) | 1716, 3110, 3725 |
| VspI | ATTAAT | 2 cut(s) | 3482, 3591 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 820 |
| XbaI | TCTAGA | 3 cut(s) | 1252, 1918, 2888 |
| XceI | RCATGY | 3 cut(s) | 1526, 1783, 2392 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 226, 2955 |
| XmiI | GTMKAC | 1 cut(s) | 2863 |
| XmnI | GAANNNNTTC | 7 cut(s) | 366, 1046, 1074, 1274, 1686, 1803, 2187 |
| ZraI | GACGTC | 2 cut(s) | 598, 1516 |
| ZrmI | AGTACT | 3 cut(s) | 1137, 1332, 3646 |
| Zsp2I | ATGCAT | 1 cut(s) | 260 |