TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 482 |
| AccI | GTMKAC | 1 cut(s) | 237 |
| AcoI | YGGCCR | 1 cut(s) | 270 |
| AcuI | CTGAAG | 1 cut(s) | 44 |
| AfaI | GTAC | 2 cut(s) | 413, 468 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 49, 482 |
| AflIII | ACRYGT | 1 cut(s) | 178 |
| AgsI | TTSAA | 3 cut(s) | 59, 328, 394 |
| AjnI | CCWGG | 2 cut(s) | 444, 512 |
| AleI | CACNNNNGTG | 1 cut(s) | 478 |
| AluBI | AGCT | 7 cut(s) | 142, 168, 199, 217, 348, 434, 506 |
| AluI | AGCT | 7 cut(s) | 142, 168, 199, 217, 348, 434, 506 |
| Alw21I | GWGCWC | 1 cut(s) | 201 |
| Ama87I | CYCGRG | 2 cut(s) | 200, 212 |
| AoxI | GGCC | 1 cut(s) | 270 |
| ApeKI | GCWGC | 1 cut(s) | 506 |
| AseI | ATTAAT | 1 cut(s) | 30 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 1 cut(s) | 442 |
| AsuHPI | GGTGA | 1 cut(s) | 465 |
| AsuNHI | GCTAGC | 1 cut(s) | 242 |
| AvaI | CYCGRG | 2 cut(s) | 200, 212 |
| AvaII | GGWCC | 1 cut(s) | 442 |
| AxyI | CCTNAGG | 1 cut(s) | 48 |
| BalI | TGGCCA | 1 cut(s) | 272 |
| BanII | GRGCYC | 1 cut(s) | 201 |
| BbsI | GAAGAC | 1 cut(s) | 481 |
| Bbv12I | GWGCWC | 1 cut(s) | 201 |
| BbvI | GCAGC | 1 cut(s) | 493 |
| BccI | CCATC | 2 cut(s) | 127, 229 |
| BceAI | ACGGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 2 cut(s) | 446, 514 |
| BciVI | GTATCC | 1 cut(s) | 111 |
| BfaI | CTAG | 2 cut(s) | 243, 302 |
| BfuI | GTATCC | 1 cut(s) | 111 |
| BisI | GCNGC | 1 cut(s) | 507 |
| BlsI | GCNGC | 1 cut(s) | 508 |
| Bme1390I | CCNGG | 2 cut(s) | 446, 514 |
| Bme18I | GGWCC | 1 cut(s) | 442 |
| BmeT110I | CYCGRG | 2 cut(s) | 200, 212 |
| BmgT120I | GGNCC | 1 cut(s) | 442 |
| BmiI | GGNNCC | 1 cut(s) | 41 |
| BmrFI | CCNGG | 2 cut(s) | 446, 514 |
| BmsI | GCATC | 2 cut(s) | 288, 518 |
| BmtI | GCTAGC | 1 cut(s) | 246 |
| BpiI | GAAGAC | 1 cut(s) | 481 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 49, 482 |
| Bse21I | CCTNAGG | 1 cut(s) | 48 |
| Bse3DI | GCAATG | 1 cut(s) | 368 |
| BseBI | CCWGG | 2 cut(s) | 446, 514 |
| BseGI | GGATG | 1 cut(s) | 509 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 49, 482 |
| BseMI | GCAATG | 1 cut(s) | 368 |
| BseMII | CTCAG | 1 cut(s) | 186 |
| BseXI | GCAGC | 1 cut(s) | 493 |
| BshFI | GGCC | 1 cut(s) | 272 |
| BsiHKAI | GWGCWC | 1 cut(s) | 201 |
| BsiHKCI | CYCGRG | 2 cut(s) | 200, 212 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 49, 482 |
| BsnI | GGCC | 1 cut(s) | 272 |
| BsoBI | CYCGRG | 2 cut(s) | 200, 212 |
| Bsp1286I | GDGCHC | 1 cut(s) | 201 |
| BspANI | GGCC | 1 cut(s) | 272 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BspLI | GGNNCC | 1 cut(s) | 41 |
| BspOI | GCTAGC | 1 cut(s) | 246 |
| BsrDI | GCAATG | 1 cut(s) | 368 |
| Bst2UI | CCWGG | 2 cut(s) | 446, 514 |
| Bst6I | CTCTTC | 1 cut(s) | 69 |
| BstC8I | GCNNGC | 1 cut(s) | 244 |
| BstDEI | CTNAG | 3 cut(s) | 48, 152, 195 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 47 |
| BstF5I | GGATG | 1 cut(s) | 509 |
| BstNI | CCWGG | 2 cut(s) | 446, 514 |
| BstNSI | RCATGY | 1 cut(s) | 182 |
| BstSCI | CCNGG | 2 cut(s) | 444, 512 |
| BstV1I | GCAGC | 1 cut(s) | 493 |
| BstV2I | GAAGAC | 1 cut(s) | 481 |
| Bsu36I | CCTNAGG | 1 cut(s) | 48 |
| BsuI | GTATCC | 1 cut(s) | 111 |
| BsuRI | GGCC | 1 cut(s) | 272 |
| BtsCI | GGATG | 1 cut(s) | 509 |
| Cac8I | GCNNGC | 1 cut(s) | 244 |
| Cfr13I | GGNCC | 1 cut(s) | 442 |
| CseI | GACGC | 1 cut(s) | 248 |
| Csp6I | GTAC | 2 cut(s) | 412, 467 |
| CviAII | CATG | 1 cut(s) | 179 |
| CviQI | GTAC | 2 cut(s) | 412, 467 |
| DdeI | CTNAG | 3 cut(s) | 48, 152, 195 |
| EaeI | YGGCCR | 1 cut(s) | 270 |
| Eam1104I | CTCTTC | 1 cut(s) | 69 |
| EarI | CTCTTC | 1 cut(s) | 69 |
| Ecl136II | GAGCTC | 1 cut(s) | 199 |
| Eco24I | GRGCYC | 1 cut(s) | 201 |
| Eco47I | GGWCC | 1 cut(s) | 442 |
| Eco53kI | GAGCTC | 1 cut(s) | 199 |
| Eco57I | CTGAAG | 1 cut(s) | 44 |
| Eco81I | CCTNAGG | 1 cut(s) | 48 |
| Eco88I | CYCGRG | 2 cut(s) | 200, 212 |
| EcoICRI | GAGCTC | 1 cut(s) | 199 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 47 |
| EcoRII | CCWGG | 2 cut(s) | 444, 512 |
| EcoT38I | GRGCYC | 1 cut(s) | 201 |
| FaeI | CATG | 1 cut(s) | 182 |
| FaiI | YATR | 5 cut(s) | 165, 180, 228, 232, 359 |
| FatI | CATG | 1 cut(s) | 178 |
| FblI | GTMKAC | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 1 cut(s) | 507 |
| FokI | GGATG | 1 cut(s) | 496 |
| FriOI | GRGCYC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 1 cut(s) | 507 |
| FspBI | CTAG | 2 cut(s) | 243, 302 |
| GluI | GCNGC | 1 cut(s) | 507 |
| HaeIII | GGCC | 1 cut(s) | 272 |
| HgaI | GACGC | 1 cut(s) | 248 |
| Hin1II | CATG | 1 cut(s) | 182 |
| HinfI | GANTC | 2 cut(s) | 59, 496 |
| HphI | GGTGA | 1 cut(s) | 465 |
| Hpy166II | GTNNAC | 2 cut(s) | 77, 238 |
| Hpy188I | TCNGA | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 202, 493 |
| Hpy8I | GTNNAC | 2 cut(s) | 77, 238 |
| HpyAV | CCTTC | 1 cut(s) | 299 |
| HpyCH4V | TGCA | 2 cut(s) | 252, 509 |
| HpyF3I | CTNAG | 3 cut(s) | 48, 152, 195 |
| Hsp92II | CATG | 1 cut(s) | 182 |
| LpnPI | CCDG | 4 cut(s) | 35, 431, 458, 499 |
| Lsp1109I | GCAGC | 1 cut(s) | 493 |
| LweI | GCATC | 2 cut(s) | 288, 518 |
| MaeI | CTAG | 2 cut(s) | 243, 302 |
| MboII | GAAGA | 3 cut(s) | 37, 56, 481 |
| MhlI | GDGCHC | 1 cut(s) | 201 |
| MlsI | TGGCCA | 1 cut(s) | 272 |
| MluCI | AATT | 4 cut(s) | 11, 292, 319, 426 |
| MluNI | TGGCCA | 1 cut(s) | 272 |
| MnlI | CCTC | 2 cut(s) | 90, 144 |
| Mox20I | TGGCCA | 1 cut(s) | 272 |
| MroXI | GAANNNNTTC | 1 cut(s) | 63 |
| MscI | TGGCCA | 1 cut(s) | 272 |
| MseI | TTAA | 4 cut(s) | 30, 107, 174, 318 |
| MslI | CAYNNNNRTG | 1 cut(s) | 478 |
| Msp20I | TGGCCA | 1 cut(s) | 272 |
| MspR9I | CCNGG | 2 cut(s) | 446, 514 |
| MvaI | CCWGG | 2 cut(s) | 446, 514 |
| NheI | GCTAGC | 1 cut(s) | 242 |
| NlaIII | CATG | 1 cut(s) | 182 |
| NlaIV | GGNNCC | 1 cut(s) | 41 |
| NspI | RCATGY | 1 cut(s) | 182 |
| OliI | CACNNNNGTG | 1 cut(s) | 478 |
| PciI | ACATGT | 1 cut(s) | 178 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 101 |
| PdmI | GAANNNNTTC | 1 cut(s) | 63 |
| PfeI | GAWTC | 2 cut(s) | 59, 496 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 482 |
| PfoI | TCCNGGA | 1 cut(s) | 444 |
| PkrI | GCNGC | 1 cut(s) | 508 |
| PscI | ACATGT | 1 cut(s) | 178 |
| PshBI | ATTAAT | 1 cut(s) | 30 |
| Psp124BI | GAGCTC | 1 cut(s) | 201 |
| Psp6I | CCWGG | 2 cut(s) | 444, 512 |
| PspGI | CCWGG | 2 cut(s) | 444, 512 |
| PspN4I | GGNNCC | 1 cut(s) | 41 |
| PspPI | GGNCC | 1 cut(s) | 442 |
| RsaI | GTAC | 2 cut(s) | 413, 468 |
| RsaNI | GTAC | 2 cut(s) | 412, 467 |
| RseI | CAYNNNNRTG | 1 cut(s) | 478 |
| SacI | GAGCTC | 1 cut(s) | 201 |
| SaqAI | TTAA | 4 cut(s) | 30, 107, 174, 318 |
| SatI | GCNGC | 1 cut(s) | 507 |
| Sau96I | GGNCC | 1 cut(s) | 442 |
| ScrFI | CCNGG | 2 cut(s) | 446, 514 |
| SduI | GDGCHC | 1 cut(s) | 201 |
| SfaNI | GCATC | 2 cut(s) | 288, 518 |
| SinI | GGWCC | 1 cut(s) | 442 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 478 |
| Sse9I | AATT | 4 cut(s) | 11, 292, 319, 426 |
| SspMI | CTAG | 2 cut(s) | 243, 302 |
| SstI | GAGCTC | 1 cut(s) | 201 |
| StyD4I | CCNGG | 2 cut(s) | 444, 512 |
| TaqI | TCGA | 5 cut(s) | 129, 147, 296, 385, 492 |
| TasI | AATT | 4 cut(s) | 11, 292, 319, 426 |
| TfiI | GAWTC | 2 cut(s) | 59, 496 |
| Tru1I | TTAA | 4 cut(s) | 30, 107, 174, 318 |
| Tru9I | TTAA | 4 cut(s) | 30, 107, 174, 318 |
| TseI | GCWGC | 1 cut(s) | 506 |
| TspDTI | ATGAA | 5 cut(s) | 20, 246, 357, 357, 467 |
| TspGWI | ACGGA | 2 cut(s) | 93, 399 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 482 |
| VpaK11BI | GGWCC | 1 cut(s) | 442 |
| VspI | ATTAAT | 1 cut(s) | 30 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 47 |
| XceI | RCATGY | 1 cut(s) | 182 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 228 |
| XmiI | GTMKAC | 1 cut(s) | 237 |
| XmnI | GAANNNNTTC | 1 cut(s) | 63 |
| XspI | CTAG | 2 cut(s) | 243, 302 |