TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 199 | 9.2e-57 | TIR domain |
| TIR_2 | PF13676 | 21 - 118 | 8.7e-17 | TIR domain |
| NB-ARC | PF00931 | 209 - 370 | 4e-21 | NB-ARC domain |
| NACHT | PF05729 | 222 - 363 | 5.3e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 438 - 509 | 5.4e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 645 - 807 | 3.8e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 699 - 888 | 7.8e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 792 - 865 | 2.6e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 924 - 1062 | 7.9e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2405 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3181 |
| AccI | GTMKAC | 1 cut(s) | 1477 |
| AciI | CCGC | 3 cut(s) | 2673, 2731, 2903 |
| AclWI | GGATC | 5 cut(s) | 338, 351, 933, 2493, 2651 |
| AcsI | RAATTY | 6 cut(s) | 720, 807, 1987, 2147, 2442, 2784 |
| AcuI | CTGAAG | 6 cut(s) | 58, 402, 1064, 1087, 1712, 2042 |
| AcvI | CACGTG | 1 cut(s) | 264 |
| AcyI | GRCGYC | 1 cut(s) | 2402 |
| AdeI | CACNNNGTG | 1 cut(s) | 267 |
| AfaI | GTAC | 7 cut(s) | 500, 846, 1017, 1984, 2635, 2683, 3170 |
| AfeI | AGCGCT | 1 cut(s) | 2480 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 3181 |
| AflIII | ACRYGT | 3 cut(s) | 60, 1012, 1401 |
| AhlI | ACTAGT | 1 cut(s) | 1018 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 5 cut(s) | 218, 931, 1537, 1798, 2773 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 238, 270, 393, 425 |
| AleI | CACNNNNGTG | 1 cut(s) | 2232 |
| Alw21I | GWGCWC | 8 cut(s) | 14, 198, 513, 1140, 1409, 2229, 2887, 3166 |
| Alw26I | GTCTC | 5 cut(s) | 352, 1027, 2020, 2075, 2811 |
| Alw44I | GTGCAC | 2 cut(s) | 1405, 3162 |
| AlwI | GGATC | 5 cut(s) | 338, 351, 933, 2493, 2651 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2828 |
| Aor51HI | AGCGCT | 1 cut(s) | 2480 |
| AoxI | GGCC | 2 cut(s) | 1729, 3156 |
| ApaI | GGGCCC | 1 cut(s) | 3160 |
| ApaLI | GTGCAC | 2 cut(s) | 1405, 3162 |
| ApeKI | GCWGC | 4 cut(s) | 1696, 2121, 2281, 3219 |
| ApoI | RAATTY | 6 cut(s) | 720, 807, 1987, 2147, 2442, 2784 |
| AseI | ATTAAT | 2 cut(s) | 2526, 2553 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 807, 837, 1100, 1512, 2934 |
| AspLEI | GCGC | 1 cut(s) | 2481 |
| AspS9I | GGNCC | 5 cut(s) | 1197, 1730, 1929, 3156, 3157 |
| AsuC2I | CCSGG | 1 cut(s) | 1221 |
| AsuHPI | GGTGA | 3 cut(s) | 1082, 1847, 2345 |
| AvaII | GGWCC | 2 cut(s) | 1197, 1929 |
| BaeGI | GKGCMC | 3 cut(s) | 1409, 3160, 3166 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2828, 2861 |
| BamHI | GGATCC | 1 cut(s) | 343 |
| BanII | GRGCYC | 5 cut(s) | 198, 513, 1140, 1235, 3160 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1685, 1717 |
| BbrPI | CACGTG | 1 cut(s) | 264 |
| BbsI | GAAGAC | 3 cut(s) | 90, 1163, 2385 |
| Bbv12I | GWGCWC | 8 cut(s) | 14, 198, 513, 1140, 1409, 2229, 2887, 3166 |
| BbvI | GCAGC | 3 cut(s) | 1683, 2108, 2268 |
| BccI | CCATC | 7 cut(s) | 191, 471, 667, 854, 1295, 1309, 2945 |
| BciT130I | CCWGG | 5 cut(s) | 220, 933, 1539, 1800, 2775 |
| BciVI | GTATCC | 1 cut(s) | 1788 |
| BclI | TGATCA | 1 cut(s) | 1852 |
| BcnI | CCSGG | 1 cut(s) | 1221 |
| BcoDI | GTCTC | 5 cut(s) | 352, 1027, 2020, 2075, 2811 |
| BcuI | ACTAGT | 1 cut(s) | 1018 |
| BfaI | CTAG | 5 cut(s) | 702, 788, 870, 908, 1019 |
| BfmI | CTRYAG | 2 cut(s) | 797, 3117 |
| BfoI | RGCGCY | 1 cut(s) | 2482 |
| BfuI | GTATCC | 1 cut(s) | 1788 |
| BisI | GCNGC | 4 cut(s) | 1697, 2122, 2282, 3220 |
| BlsI | GCNGC | 4 cut(s) | 1698, 2123, 2283, 3221 |
| Bme1390I | CCNGG | 6 cut(s) | 220, 933, 1221, 1539, 1800, 2775 |
| Bme18I | GGWCC | 2 cut(s) | 1197, 1929 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 5 cut(s) | 1197, 1730, 1929, 3156, 3157 |
| BmiI | GGNNCC | 7 cut(s) | 345, 1198, 1366, 1931, 2576, 3157, 3158 |
| BmrFI | CCNGG | 6 cut(s) | 220, 933, 1221, 1539, 1800, 2775 |
| BmrI | ACTGGG | 1 cut(s) | 3039 |
| BmsI | GCATC | 7 cut(s) | 436, 559, 589, 2914, 3057, 3113, 3122 |
| BmuI | ACTGGG | 1 cut(s) | 3039 |
| BpiI | GAAGAC | 3 cut(s) | 90, 1163, 2385 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 433, 465, 1708, 1740 |
| BpuEI | CTTGAG | 7 cut(s) | 1774, 1942, 1979, 2110, 2251, 2759, 2880 |
| BpuMI | CCSGG | 1 cut(s) | 1221 |
| Bsa29I | ATCGAT | 1 cut(s) | 1899 |
| BsaAI | YACGTR | 1 cut(s) | 264 |
| BsaBI | GATNNNNATC | 2 cut(s) | 924, 1659 |
| BsaHI | GRCGYC | 1 cut(s) | 2402 |
| BsaJI | CCNNGG | 4 cut(s) | 47, 932, 1027, 2792 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2808, 2838 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 3181 |
| Bse1I | ACTGG | 4 cut(s) | 37, 971, 3045, 3059 |
| Bse8I | GATNNNNATC | 2 cut(s) | 924, 1659 |
| BseBI | CCWGG | 5 cut(s) | 220, 933, 1539, 1800, 2775 |
| BseCI | ATCGAT | 1 cut(s) | 1899 |
| BseDI | CCNNGG | 4 cut(s) | 47, 932, 1027, 2792 |
| BseGI | GGATG | 6 cut(s) | 482, 550, 678, 1508, 1819, 3128 |
| BseJI | GATNNNNATC | 2 cut(s) | 924, 1659 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 3181 |
| BseMII | CTCAG | 5 cut(s) | 1473, 2249, 2326, 2820, 3054 |
| BseNI | ACTGG | 4 cut(s) | 37, 971, 3045, 3059 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseSI | GKGCMC | 3 cut(s) | 1409, 3160, 3166 |
| BseXI | GCAGC | 3 cut(s) | 1683, 2108, 2268 |
| Bsh1285I | CGRYCG | 1 cut(s) | 231 |
| BshFI | GGCC | 2 cut(s) | 1731, 3158 |
| BshVI | ATCGAT | 1 cut(s) | 1899 |
| BsiEI | CGRYCG | 1 cut(s) | 231 |
| BsiHKAI | GWGCWC | 8 cut(s) | 14, 198, 513, 1140, 1409, 2229, 2887, 3166 |
| BsiSI | CCGG | 4 cut(s) | 191, 1118, 1220, 1811 |
| BslFI | GGGAC | 3 cut(s) | 167, 328, 2206 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 3181 |
| BsmAI | GTCTC | 5 cut(s) | 352, 1027, 2020, 2075, 2811 |
| BsmFI | GGGAC | 3 cut(s) | 167, 328, 2206 |
| BsmI | GAATGC | 2 cut(s) | 302, 1102 |
| BsnI | GGCC | 2 cut(s) | 1731, 3158 |
| Bsp120I | GGGCCC | 1 cut(s) | 3156 |
| Bsp1407I | TGTACA | 1 cut(s) | 3168 |
| Bsp143I | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| Bsp19I | CCATGG | 2 cut(s) | 47, 1027 |
| BspACI | CCGC | 3 cut(s) | 2673, 2731, 2903 |
| BspANI | GGCC | 2 cut(s) | 1731, 3158 |
| BspCNI | CTCAG | 5 cut(s) | 1472, 2250, 2325, 2821, 3055 |
| BspDI | ATCGAT | 1 cut(s) | 1899 |
| BspHI | TCATGA | 1 cut(s) | 513 |
| BspLI | GGNNCC | 7 cut(s) | 345, 1198, 1366, 1931, 2576, 3157, 3158 |
| BspMAI | CTGCAG | 1 cut(s) | 801 |
| BspPI | GGATC | 5 cut(s) | 338, 351, 933, 2493, 2651 |
| BspQI | GCTCTTC | 3 cut(s) | 1083, 1527, 3180 |
| BsrGI | TGTACA | 1 cut(s) | 3168 |
| BsrI | ACTGG | 4 cut(s) | 37, 971, 3045, 3059 |
| BssECI | CCNNGG | 4 cut(s) | 47, 932, 1027, 2792 |
| BssMI | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| BssNAI | GTATAC | 1 cut(s) | 1478 |
| BssNI | GRCGYC | 1 cut(s) | 2402 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 1027 |
| Bst1107I | GTATAC | 1 cut(s) | 1478 |
| Bst2UI | CCWGG | 5 cut(s) | 220, 933, 1539, 1800, 2775 |
| Bst6I | CTCTTC | 7 cut(s) | 396, 1083, 1357, 1527, 1641, 2018, 3180 |
| BstACI | GRCGYC | 1 cut(s) | 2402 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3132 |
| BstAUI | TGTACA | 1 cut(s) | 3168 |
| BstBAI | YACGTR | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 3 cut(s) | 272, 531, 2521 |
| BstDSI | CCRYGG | 3 cut(s) | 47, 1027, 2792 |
| BstF5I | GGATG | 6 cut(s) | 482, 550, 678, 1508, 1819, 3128 |
| BstH2I | RGCGCY | 1 cut(s) | 2482 |
| BstHHI | GCGC | 1 cut(s) | 2481 |
| BstKTI | GATC | 8 cut(s) | 231, 346, 928, 1855, 1903, 2257, 2488, 2659 |
| BstMAI | GTCTC | 5 cut(s) | 352, 1027, 2020, 2075, 2811 |
| BstMBI | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| BstMCI | CGRYCG | 1 cut(s) | 231 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 78, 470, 2539, 2882, 2891, 3132 |
| BstNI | CCWGG | 5 cut(s) | 220, 933, 1539, 1800, 2775 |
| BstNSI | RCATGY | 3 cut(s) | 1016, 1405, 3081 |
| BstSCI | CCNGG | 6 cut(s) | 218, 931, 1219, 1537, 1798, 2773 |
| BstSFI | CTRYAG | 2 cut(s) | 797, 3117 |
| BstSLI | GKGCMC | 3 cut(s) | 1409, 3160, 3166 |
| BstV1I | GCAGC | 3 cut(s) | 1683, 2108, 2268 |
| BstV2I | GAAGAC | 3 cut(s) | 90, 1163, 2385 |
| BstX2I | RGATCY | 3 cut(s) | 343, 2485, 2656 |
| BstYI | RGATCY | 3 cut(s) | 343, 2485, 2656 |
| BstZ17I | GTATAC | 1 cut(s) | 1478 |
| Bsu15I | ATCGAT | 1 cut(s) | 1899 |
| BsuI | GTATCC | 1 cut(s) | 1788 |
| BsuRI | GGCC | 2 cut(s) | 1731, 3158 |
| BsuTUI | ATCGAT | 1 cut(s) | 1899 |
| BtgI | CCRYGG | 3 cut(s) | 47, 1027, 2792 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsCI | GGATG | 6 cut(s) | 482, 550, 678, 1508, 1819, 3128 |
| BtsI | GCAGTG | 2 cut(s) | 134, 201 |
| BtsIMutI | CAGTG | 5 cut(s) | 30, 134, 201, 533, 3164 |
| Cac8I | GCNNGC | 3 cut(s) | 272, 531, 2521 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2828 |
| CciI | TCATGA | 1 cut(s) | 513 |
| CfoI | GCGC | 1 cut(s) | 2481 |
| Cfr13I | GGNCC | 5 cut(s) | 1197, 1730, 1929, 3156, 3157 |
| ClaI | ATCGAT | 1 cut(s) | 1899 |
| CseI | GACGC | 2 cut(s) | 733, 1554 |
| CsiI | ACCWGGT | 1 cut(s) | 1798 |
| Csp6I | GTAC | 7 cut(s) | 499, 845, 1016, 1983, 2634, 2682, 3169 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 518, 553, 2649, 2684 |
| CviQI | GTAC | 7 cut(s) | 499, 845, 1016, 1983, 2634, 2682, 3169 |
| DpnI | GATC | 8 cut(s) | 230, 345, 927, 1854, 1902, 2256, 2487, 2658 |
| DpnII | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| DraI | TTTAAA | 1 cut(s) | 2382 |
| DraIII | CACNNNGTG | 1 cut(s) | 267 |
| Eam1104I | CTCTTC | 7 cut(s) | 396, 1083, 1357, 1527, 1641, 2018, 3180 |
| EarI | CTCTTC | 7 cut(s) | 396, 1083, 1357, 1527, 1641, 2018, 3180 |
| Ecl136II | GAGCTC | 3 cut(s) | 196, 511, 1138 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 1027 |
| Eco24I | GRGCYC | 5 cut(s) | 198, 513, 1140, 1235, 3160 |
| Eco47I | GGWCC | 2 cut(s) | 1197, 1929 |
| Eco47III | AGCGCT | 1 cut(s) | 2480 |
| Eco53kI | GAGCTC | 3 cut(s) | 196, 511, 1138 |
| Eco57I | CTGAAG | 6 cut(s) | 58, 402, 1064, 1087, 1712, 2042 |
| Eco72I | CACGTG | 1 cut(s) | 264 |
| EcoICRI | GAGCTC | 3 cut(s) | 196, 511, 1138 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1197, 1929, 3156 |
| EcoRII | CCWGG | 5 cut(s) | 218, 931, 1537, 1798, 2773 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 1027 |
| EcoT22I | ATGCAT | 2 cut(s) | 302, 3083 |
| EcoT38I | GRGCYC | 5 cut(s) | 198, 513, 1140, 1235, 3160 |
| ErhI | CCWWGG | 2 cut(s) | 47, 1027 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 888, 920 |
| FaqI | GGGAC | 3 cut(s) | 167, 328, 2206 |
| FauI | CCCGC | 1 cut(s) | 2910 |
| FauNDI | CATATG | 1 cut(s) | 1045 |
| FbaI | TGATCA | 1 cut(s) | 1852 |
| FblI | GTMKAC | 1 cut(s) | 1477 |
| Fnu4HI | GCNGC | 4 cut(s) | 1697, 2122, 2282, 3220 |
| FokI | GGATG | 6 cut(s) | 489, 537, 685, 1515, 1826, 3135 |
| FriOI | GRGCYC | 5 cut(s) | 198, 513, 1140, 1235, 3160 |
| Fsp4HI | GCNGC | 4 cut(s) | 1697, 2122, 2282, 3220 |
| FspBI | CTAG | 5 cut(s) | 702, 788, 870, 908, 1019 |
| GlaI | GCGC | 1 cut(s) | 2480 |
| GluI | GCNGC | 4 cut(s) | 1697, 2122, 2282, 3220 |
| HaeII | RGCGCY | 1 cut(s) | 2482 |
| HaeIII | GGCC | 2 cut(s) | 1731, 3158 |
| HapII | CCGG | 4 cut(s) | 191, 1118, 1220, 1811 |
| HgaI | GACGC | 2 cut(s) | 733, 1554 |
| HhaI | GCGC | 1 cut(s) | 2481 |
| Hin1I | GRCGYC | 1 cut(s) | 2402 |
| Hin6I | GCGC | 1 cut(s) | 2479 |
| HinP1I | GCGC | 1 cut(s) | 2479 |
| HindIII | AAGCTT | 2 cut(s) | 2177, 2540 |
| HpaII | CCGG | 4 cut(s) | 191, 1118, 1220, 1811 |
| HphI | GGTGA | 3 cut(s) | 1082, 1847, 2345 |
| Hpy166II | GTNNAC | 6 cut(s) | 1407, 1478, 1544, 1688, 2620, 3164 |
| Hpy8I | GTNNAC | 6 cut(s) | 1407, 1478, 1544, 1688, 2620, 3164 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 2609 |
| HpyCH4IV | ACGT | 4 cut(s) | 60, 263, 648, 2402 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 78, 470, 2539, 2882, 2891, 3132 |
| HpySE526I | ACGT | 4 cut(s) | 60, 263, 648, 2402 |
| Hsp92I | GRCGYC | 1 cut(s) | 2402 |
| HspAI | GCGC | 1 cut(s) | 2479 |
| Ksp22I | TGATCA | 1 cut(s) | 1852 |
| Kzo9I | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| LguI | GCTCTTC | 3 cut(s) | 1083, 1527, 3180 |
| LmnI | GCTCC | 6 cut(s) | 193, 201, 540, 1364, 2248, 2580 |
| Lsp1109I | GCAGC | 3 cut(s) | 1683, 2108, 2268 |
| LweI | GCATC | 7 cut(s) | 436, 559, 589, 2914, 3057, 3113, 3122 |
| MabI | ACCWGGT | 1 cut(s) | 1798 |
| MaeI | CTAG | 5 cut(s) | 702, 788, 870, 908, 1019 |
| MaeII | ACGT | 4 cut(s) | 60, 263, 648, 2402 |
| MaeIII | GTNAC | 4 cut(s) | 1907, 2269, 2824, 3020 |
| MalI | GATC | 8 cut(s) | 230, 345, 927, 1854, 1902, 2256, 2487, 2658 |
| MboI | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| MfeI | CAATTG | 2 cut(s) | 2582, 2961 |
| MflI | RGATCY | 3 cut(s) | 343, 2485, 2656 |
| MlyI | GAGTC | 2 cut(s) | 2077, 2356 |
| MmeI | TCCRAC | 2 cut(s) | 571, 2602 |
| Mph1103I | ATGCAT | 2 cut(s) | 302, 3083 |
| MroXI | GAANNNNTTC | 5 cut(s) | 807, 837, 1100, 1512, 2934 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2232 |
| MspI | CCGG | 4 cut(s) | 191, 1118, 1220, 1811 |
| MspR9I | CCNGG | 6 cut(s) | 220, 933, 1221, 1539, 1800, 2775 |
| MunI | CAATTG | 2 cut(s) | 2582, 2961 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 1102 |
| MvaI | CCWGG | 5 cut(s) | 220, 933, 1539, 1800, 2775 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 78, 470, 2539, 2882, 2891, 3132 |
| NciI | CCSGG | 1 cut(s) | 1221 |
| NcoI | CCATGG | 2 cut(s) | 47, 1027 |
| NdeI | CATATG | 1 cut(s) | 1045 |
| NdeII | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| NlaIV | GGNNCC | 7 cut(s) | 345, 1198, 1366, 1931, 2576, 3157, 3158 |
| NsiI | ATGCAT | 2 cut(s) | 302, 3083 |
| NspI | RCATGY | 3 cut(s) | 1016, 1405, 3081 |
| OliI | CACNNNNGTG | 1 cut(s) | 2232 |
| PagI | TCATGA | 1 cut(s) | 513 |
| PciI | ACATGT | 2 cut(s) | 1012, 1401 |
| PciSI | GCTCTTC | 3 cut(s) | 1083, 1527, 3180 |
| PctI | GAATGC | 2 cut(s) | 302, 1102 |
| PdmI | GAANNNNTTC | 5 cut(s) | 807, 837, 1100, 1512, 2934 |
| PflFI | GACNNNGTC | 1 cut(s) | 1548 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3181 |
| PfoI | TCCNGGA | 1 cut(s) | 2773 |
| PkrI | GCNGC | 4 cut(s) | 1698, 2123, 2283, 3221 |
| Ple19I | CGATCG | 1 cut(s) | 231 |
| PleI | GAGTC | 2 cut(s) | 2076, 2355 |
| PmaCI | CACGTG | 1 cut(s) | 264 |
| PmlI | CACGTG | 1 cut(s) | 264 |
| PpsI | GAGTC | 2 cut(s) | 2076, 2355 |
| Ppu21I | YACGTR | 1 cut(s) | 264 |
| PpuMI | RGGWCCY | 2 cut(s) | 1197, 1929 |
| PscI | ACATGT | 2 cut(s) | 1012, 1401 |
| PshBI | ATTAAT | 2 cut(s) | 2526, 2553 |
| Psp124BI | GAGCTC | 3 cut(s) | 198, 513, 1140 |
| Psp5II | RGGWCCY | 2 cut(s) | 1197, 1929 |
| Psp6I | CCWGG | 5 cut(s) | 218, 931, 1537, 1798, 2773 |
| PspCI | CACGTG | 1 cut(s) | 264 |
| PspGI | CCWGG | 5 cut(s) | 218, 931, 1537, 1798, 2773 |
| PspN4I | GGNNCC | 7 cut(s) | 345, 1198, 1366, 1931, 2576, 3157, 3158 |
| PspOMI | GGGCCC | 1 cut(s) | 3156 |
| PspPI | GGNCC | 5 cut(s) | 1197, 1730, 1929, 3156, 3157 |
| PspPPI | RGGWCCY | 2 cut(s) | 1197, 1929 |
| PstI | CTGCAG | 1 cut(s) | 801 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2828 |
| PsuI | RGATCY | 3 cut(s) | 343, 2485, 2656 |
| PsyI | GACNNNGTC | 1 cut(s) | 1548 |
| PvuI | CGATCG | 1 cut(s) | 231 |
| RsaI | GTAC | 7 cut(s) | 500, 846, 1017, 1984, 2635, 2683, 3170 |
| RsaNI | GTAC | 7 cut(s) | 499, 845, 1016, 1983, 2634, 2682, 3169 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2232 |
| SacI | GAGCTC | 3 cut(s) | 198, 513, 1140 |
| SapI | GCTCTTC | 3 cut(s) | 1083, 1527, 3180 |
| SatI | GCNGC | 4 cut(s) | 1697, 2122, 2282, 3220 |
| Sau3AI | GATC | 8 cut(s) | 228, 343, 925, 1852, 1900, 2254, 2485, 2656 |
| Sau96I | GGNCC | 5 cut(s) | 1197, 1730, 1929, 3156, 3157 |
| SchI | GAGTC | 2 cut(s) | 2077, 2356 |
| ScrFI | CCNGG | 6 cut(s) | 220, 933, 1221, 1539, 1800, 2775 |
| SexAI | ACCWGGT | 1 cut(s) | 1798 |
| SfaNI | GCATC | 7 cut(s) | 436, 559, 589, 2914, 3057, 3113, 3122 |
| SfcI | CTRYAG | 2 cut(s) | 797, 3117 |
| SinI | GGWCC | 2 cut(s) | 1197, 1929 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2232 |
| SmlI | CTYRAG | 7 cut(s) | 1753, 1921, 1958, 2125, 2230, 2738, 2895 |
| SmoI | CTYRAG | 7 cut(s) | 1753, 1921, 1958, 2125, 2230, 2738, 2895 |
| SpeI | ACTAGT | 1 cut(s) | 1018 |
| SsiI | CCGC | 3 cut(s) | 2673, 2731, 2903 |
| SspI | AATATT | 1 cut(s) | 1849 |
| SspMI | CTAG | 5 cut(s) | 702, 788, 870, 908, 1019 |
| SstI | GAGCTC | 3 cut(s) | 198, 513, 1140 |
| StyD4I | CCNGG | 6 cut(s) | 218, 931, 1219, 1537, 1798, 2773 |
| StyI | CCWWGG | 2 cut(s) | 47, 1027 |
| TaiI | ACGT | 4 cut(s) | 63, 266, 651, 2405 |
| TaqI | TCGA | 4 cut(s) | 210, 1009, 1899, 3112 |
| TaqII | GACCGA | 1 cut(s) | 773 |
| TatI | WGTACW | 3 cut(s) | 1015, 2633, 3168 |
| TscAI | CASTG | 5 cut(s) | 37, 134, 208, 540, 3171 |
| TseI | GCWGC | 4 cut(s) | 1696, 2121, 2281, 3219 |
| TspGWI | ACGGA | 3 cut(s) | 2420, 2781, 2904 |
| TspRI | CASTG | 5 cut(s) | 37, 134, 208, 540, 3171 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1548 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3181 |
| VneI | GTGCAC | 2 cut(s) | 1405, 3162 |
| VpaK11BI | GGWCC | 2 cut(s) | 1197, 1929 |
| VspI | ATTAAT | 2 cut(s) | 2526, 2553 |
| XapI | RAATTY | 6 cut(s) | 720, 807, 1987, 2147, 2442, 2784 |
| XceI | RCATGY | 3 cut(s) | 1016, 1405, 3081 |
| XmiI | GTMKAC | 1 cut(s) | 1477 |
| XmnI | GAANNNNTTC | 5 cut(s) | 807, 837, 1100, 1512, 2934 |
| XspI | CTAG | 5 cut(s) | 702, 788, 870, 908, 1019 |
| ZraI | GACGTC | 1 cut(s) | 2403 |
| Zsp2I | ATGCAT | 2 cut(s) | 302, 3083 |