TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 8 - 72 | 1.3e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 102 - 202 | 6e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 121 - 217 | 3.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 261 - 395 | 1.3e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 466, 579, 1128 |
| AciI | CCGC | 1 cut(s) | 262 |
| AclWI | GGATC | 4 cut(s) | 232, 287, 447, 605 |
| AcsI | RAATTY | 4 cut(s) | 731, 760, 795, 960 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AcvI | CACGTG | 1 cut(s) | 1221 |
| AcyI | GRCGYC | 1 cut(s) | 484 |
| AfaI | GTAC | 2 cut(s) | 589, 865 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 695 |
| AflII | CTTAAG | 1 cut(s) | 25 |
| AflIII | ACRYGT | 2 cut(s) | 568, 1218 |
| AgsI | TTSAA | 5 cut(s) | 118, 145, 533, 625, 902 |
| AjnI | CCWGG | 1 cut(s) | 784 |
| AluBI | AGCT | 5 cut(s) | 53, 121, 496, 847, 932 |
| AluI | AGCT | 5 cut(s) | 53, 121, 496, 847, 932 |
| Alw26I | GTCTC | 3 cut(s) | 153, 195, 1020 |
| AlwI | GGATC | 4 cut(s) | 232, 287, 447, 605 |
| AoxI | GGCC | 3 cut(s) | 76, 253, 985 |
| ApeKI | GCWGC | 1 cut(s) | 414 |
| ApoI | RAATTY | 4 cut(s) | 731, 760, 795, 960 |
| AseI | ATTAAT | 1 cut(s) | 705 |
| AspA2I | CCTAGG | 1 cut(s) | 989 |
| AspS9I | GGNCC | 3 cut(s) | 253, 986, 999 |
| AsuII | TTCGAA | 2 cut(s) | 957, 1086 |
| AvaII | GGWCC | 1 cut(s) | 999 |
| AvrII | CCTAGG | 1 cut(s) | 989 |
| BanII | GRGCYC | 1 cut(s) | 1159 |
| BbrPI | CACGTG | 1 cut(s) | 1221 |
| BbsI | GAAGAC | 3 cut(s) | 163, 312, 929 |
| BbvI | GCAGC | 1 cut(s) | 401 |
| BccI | CCATC | 5 cut(s) | 559, 622, 865, 977, 1094 |
| BciT130I | CCWGG | 1 cut(s) | 786 |
| BclI | TGATCA | 1 cut(s) | 742 |
| BcoDI | GTCTC | 3 cut(s) | 153, 195, 1020 |
| BfaI | CTAG | 5 cut(s) | 95, 269, 929, 990, 1019 |
| BfrI | CTTAAG | 1 cut(s) | 25 |
| BglII | AGATCT | 1 cut(s) | 904 |
| BisI | GCNGC | 1 cut(s) | 415 |
| BlnI | CCTAGG | 1 cut(s) | 989 |
| BlsI | GCNGC | 1 cut(s) | 416 |
| Bme1390I | CCNGG | 1 cut(s) | 786 |
| Bme18I | GGWCC | 1 cut(s) | 999 |
| BmgT120I | GGNCC | 3 cut(s) | 253, 986, 999 |
| BmiI | GGNNCC | 2 cut(s) | 254, 687 |
| BmrFI | CCNGG | 1 cut(s) | 786 |
| BmrI | ACTGGG | 1 cut(s) | 928 |
| BmsI | GCATC | 2 cut(s) | 164, 220 |
| BmuI | ACTGGG | 1 cut(s) | 928 |
| BpiI | GAAGAC | 3 cut(s) | 163, 312, 929 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 740, 772 |
| BpmI | CTGGAG | 1 cut(s) | 533 |
| Bpu14I | TTCGAA | 2 cut(s) | 957, 1086 |
| BpuEI | CTTGAG | 1 cut(s) | 703 |
| BsaAI | YACGTR | 1 cut(s) | 1221 |
| BsaHI | GRCGYC | 1 cut(s) | 484 |
| BsaI | GGTCTC | 1 cut(s) | 1020 |
| BsaJI | CCNNGG | 2 cut(s) | 784, 989 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1110, 1140 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 695 |
| Bse1I | ACTGG | 3 cut(s) | 875, 923, 1136 |
| Bse3DI | GCAATG | 1 cut(s) | 675 |
| BseBI | CCWGG | 1 cut(s) | 786 |
| BseDI | CCNNGG | 2 cut(s) | 784, 989 |
| BseGI | GGATG | 4 cut(s) | 179, 235, 614, 988 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 695 |
| BseMI | GCAATG | 1 cut(s) | 675 |
| BseNI | ACTGG | 3 cut(s) | 875, 923, 1136 |
| BseXI | GCAGC | 1 cut(s) | 401 |
| BseYI | CCCAGC | 1 cut(s) | 874 |
| BshFI | GGCC | 3 cut(s) | 78, 255, 987 |
| BslFI | GGGAC | 1 cut(s) | 840 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 695 |
| BsmAI | GTCTC | 3 cut(s) | 153, 195, 1020 |
| BsmFI | GGGAC | 1 cut(s) | 840 |
| BsmI | GAATGC | 1 cut(s) | 171 |
| BsnI | GGCC | 3 cut(s) | 78, 255, 987 |
| Bso31I | GGTCTC | 1 cut(s) | 1020 |
| Bsp119I | TTCGAA | 2 cut(s) | 957, 1086 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1159 |
| Bsp143I | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| BspACI | CCGC | 1 cut(s) | 262 |
| BspANI | GGCC | 3 cut(s) | 78, 255, 987 |
| BspLI | GGNNCC | 2 cut(s) | 254, 687 |
| BspPI | GGATC | 4 cut(s) | 232, 287, 447, 605 |
| BspT104I | TTCGAA | 2 cut(s) | 957, 1086 |
| BspTI | CTTAAG | 1 cut(s) | 25 |
| BspTNI | GGTCTC | 1 cut(s) | 1020 |
| BsrDI | GCAATG | 1 cut(s) | 675 |
| BsrI | ACTGG | 3 cut(s) | 875, 923, 1136 |
| BssECI | CCNNGG | 2 cut(s) | 784, 989 |
| BssMI | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| BssNAI | GTATAC | 1 cut(s) | 1129 |
| BssNI | GRCGYC | 1 cut(s) | 484 |
| BssT1I | CCWWGG | 1 cut(s) | 989 |
| Bst1107I | GTATAC | 1 cut(s) | 1129 |
| Bst2UI | CCWGG | 1 cut(s) | 786 |
| Bst6I | CTCTTC | 1 cut(s) | 552 |
| BstACI | GRCGYC | 1 cut(s) | 484 |
| BstAFI | CTTAAG | 1 cut(s) | 25 |
| BstBAI | YACGTR | 1 cut(s) | 1221 |
| BstBI | TTCGAA | 2 cut(s) | 957, 1086 |
| BstDEI | CTNAG | 3 cut(s) | 152, 443, 492 |
| BstF5I | GGATG | 4 cut(s) | 179, 235, 614, 988 |
| BstKTI | GATC | 7 cut(s) | 227, 295, 442, 511, 613, 745, 907 |
| BstMAI | GTCTC | 3 cut(s) | 153, 195, 1020 |
| BstMBI | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 261, 483, 672, 1171 |
| BstNI | CCWGG | 1 cut(s) | 786 |
| BstNSI | RCATGY | 1 cut(s) | 572 |
| BstSCI | CCNGG | 1 cut(s) | 784 |
| BstV1I | GCAGC | 1 cut(s) | 401 |
| BstV2I | GAAGAC | 3 cut(s) | 163, 312, 929 |
| BstX2I | RGATCY | 3 cut(s) | 439, 610, 904 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 874 |
| BstYI | RGATCY | 3 cut(s) | 439, 610, 904 |
| BstZ17I | GTATAC | 1 cut(s) | 1129 |
| BsuRI | GGCC | 3 cut(s) | 78, 255, 987 |
| BtsCI | GGATG | 4 cut(s) | 179, 235, 614, 988 |
| BtsIMutI | CAGTG | 1 cut(s) | 738 |
| Cfr13I | GGNCC | 3 cut(s) | 253, 986, 999 |
| CseI | GACGC | 1 cut(s) | 492 |
| Csp6I | GTAC | 2 cut(s) | 588, 864 |
| CviAII | CATG | 3 cut(s) | 205, 569, 861 |
| CviQI | GTAC | 2 cut(s) | 588, 864 |
| DdeI | CTNAG | 3 cut(s) | 152, 443, 492 |
| DpnI | GATC | 7 cut(s) | 226, 294, 441, 510, 612, 744, 906 |
| DpnII | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| Eam1104I | CTCTTC | 1 cut(s) | 552 |
| EarI | CTCTTC | 1 cut(s) | 552 |
| Eco130I | CCWWGG | 1 cut(s) | 989 |
| Eco24I | GRGCYC | 1 cut(s) | 1159 |
| Eco31I | GGTCTC | 1 cut(s) | 1020 |
| Eco32I | GATATC | 1 cut(s) | 397 |
| Eco47I | GGWCC | 1 cut(s) | 999 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| Eco72I | CACGTG | 1 cut(s) | 1221 |
| EcoO109I | RGGNCCY | 1 cut(s) | 253 |
| EcoRII | CCWGG | 1 cut(s) | 784 |
| EcoRV | GATATC | 1 cut(s) | 397 |
| EcoT14I | CCWWGG | 1 cut(s) | 989 |
| EcoT38I | GRGCYC | 1 cut(s) | 1159 |
| ErhI | CCWWGG | 1 cut(s) | 989 |
| FaeI | CATG | 3 cut(s) | 208, 572, 864 |
| FaqI | GGGAC | 1 cut(s) | 840 |
| FatI | CATG | 3 cut(s) | 204, 568, 860 |
| FbaI | TGATCA | 1 cut(s) | 742 |
| FblI | GTMKAC | 3 cut(s) | 466, 579, 1128 |
| Fnu4HI | GCNGC | 1 cut(s) | 415 |
| FokI | GGATG | 4 cut(s) | 186, 242, 601, 995 |
| FriOI | GRGCYC | 1 cut(s) | 1159 |
| Fsp4HI | GCNGC | 1 cut(s) | 415 |
| FspBI | CTAG | 5 cut(s) | 95, 269, 929, 990, 1019 |
| GluI | GCNGC | 1 cut(s) | 415 |
| GsaI | CCCAGC | 1 cut(s) | 878 |
| GsuI | CTGGAG | 1 cut(s) | 533 |
| HaeIII | GGCC | 3 cut(s) | 78, 255, 987 |
| HgaI | GACGC | 1 cut(s) | 492 |
| Hin1I | GRCGYC | 1 cut(s) | 484 |
| Hin1II | CATG | 3 cut(s) | 208, 572, 864 |
| HincII | GTYRAC | 1 cut(s) | 354 |
| HindII | GTYRAC | 1 cut(s) | 354 |
| HindIII | AAGCTT | 2 cut(s) | 119, 494 |
| HinfI | GANTC | 8 cut(s) | 34, 159, 283, 633, 724, 753, 1022, 1135 |
| HpaI | GTTAAC | 1 cut(s) | 354 |
| Hpy166II | GTNNAC | 5 cut(s) | 354, 380, 467, 580, 1129 |
| Hpy188I | TCNGA | 6 cut(s) | 39, 164, 229, 610, 819, 1027 |
| Hpy8I | GTNNAC | 5 cut(s) | 354, 380, 467, 580, 1129 |
| Hpy99I | CGWCG | 1 cut(s) | 1059 |
| HpyAV | CCTTC | 6 cut(s) | 89, 266, 383, 539, 689, 1109 |
| HpyCH4IV | ACGT | 1 cut(s) | 1220 |
| HpyCH4V | TGCA | 4 cut(s) | 169, 522, 675, 680 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 261, 483, 672, 1171 |
| HpyF3I | CTNAG | 3 cut(s) | 152, 443, 492 |
| HpySE526I | ACGT | 1 cut(s) | 1220 |
| Hsp92I | GRCGYC | 1 cut(s) | 484 |
| Hsp92II | CATG | 3 cut(s) | 208, 572, 864 |
| Ksp22I | TGATCA | 1 cut(s) | 742 |
| KspAI | GTTAAC | 1 cut(s) | 354 |
| Kzo9I | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| LmnI | GCTCC | 1 cut(s) | 844 |
| Lsp1109I | GCAGC | 1 cut(s) | 401 |
| LweI | GCATC | 2 cut(s) | 164, 220 |
| MaeI | CTAG | 5 cut(s) | 95, 269, 929, 990, 1019 |
| MaeII | ACGT | 1 cut(s) | 1220 |
| MaeIII | GTNAC | 1 cut(s) | 218 |
| MalI | GATC | 7 cut(s) | 226, 294, 441, 510, 612, 744, 906 |
| MboI | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| MboII | GAAGA | 7 cut(s) | 16, 168, 312, 539, 929, 1156, 1196 |
| MfeI | CAATTG | 2 cut(s) | 60, 583 |
| MflI | RGATCY | 3 cut(s) | 439, 610, 904 |
| MhlI | GDGCHC | 1 cut(s) | 1159 |
| MlyI | GAGTC | 4 cut(s) | 28, 153, 292, 1031 |
| MmeI | TCCRAC | 1 cut(s) | 149 |
| MnlI | CCTC | 8 cut(s) | 25, 238, 306, 510, 555, 742, 764, 861 |
| MseI | TTAA | 4 cut(s) | 26, 353, 654, 705 |
| MslI | CAYNNNNRTG | 3 cut(s) | 573, 859, 945 |
| MspCI | CTTAAG | 1 cut(s) | 25 |
| MspR9I | CCNGG | 1 cut(s) | 786 |
| MunI | CAATTG | 2 cut(s) | 60, 583 |
| Mva1269I | GAATGC | 1 cut(s) | 171 |
| MvaI | CCWGG | 1 cut(s) | 786 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 261, 483, 672, 1171 |
| NdeII | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| NlaIII | CATG | 3 cut(s) | 208, 572, 864 |
| NlaIV | GGNNCC | 2 cut(s) | 254, 687 |
| NspI | RCATGY | 1 cut(s) | 572 |
| NspV | TTCGAA | 2 cut(s) | 957, 1086 |
| PciI | ACATGT | 1 cut(s) | 568 |
| PctI | GAATGC | 1 cut(s) | 171 |
| PfeI | GAWTC | 4 cut(s) | 633, 724, 753, 1135 |
| PkrI | GCNGC | 1 cut(s) | 416 |
| PleI | GAGTC | 4 cut(s) | 28, 153, 291, 1030 |
| PmaCI | CACGTG | 1 cut(s) | 1221 |
| PmlI | CACGTG | 1 cut(s) | 1221 |
| PpsI | GAGTC | 4 cut(s) | 28, 153, 291, 1030 |
| Ppu21I | YACGTR | 1 cut(s) | 1221 |
| PscI | ACATGT | 1 cut(s) | 568 |
| PshBI | ATTAAT | 1 cut(s) | 705 |
| Psp6I | CCWGG | 1 cut(s) | 784 |
| PspCI | CACGTG | 1 cut(s) | 1221 |
| PspFI | CCCAGC | 1 cut(s) | 874 |
| PspGI | CCWGG | 1 cut(s) | 784 |
| PspN4I | GGNNCC | 2 cut(s) | 254, 687 |
| PspPI | GGNCC | 3 cut(s) | 253, 986, 999 |
| PsuI | RGATCY | 3 cut(s) | 439, 610, 904 |
| RsaI | GTAC | 2 cut(s) | 589, 865 |
| RsaNI | GTAC | 2 cut(s) | 588, 864 |
| RseI | CAYNNNNRTG | 3 cut(s) | 573, 859, 945 |
| SaqAI | TTAA | 4 cut(s) | 26, 353, 654, 705 |
| SatI | GCNGC | 1 cut(s) | 415 |
| Sau3AI | GATC | 7 cut(s) | 224, 292, 439, 508, 610, 742, 904 |
| Sau96I | GGNCC | 3 cut(s) | 253, 986, 999 |
| SchI | GAGTC | 4 cut(s) | 28, 153, 292, 1031 |
| ScrFI | CCNGG | 1 cut(s) | 786 |
| SduI | GDGCHC | 1 cut(s) | 1159 |
| SfaNI | GCATC | 2 cut(s) | 164, 220 |
| SfuI | TTCGAA | 2 cut(s) | 957, 1086 |
| SinI | GGWCC | 1 cut(s) | 999 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 573, 859, 945 |
| SmlI | CTYRAG | 2 cut(s) | 25, 718 |
| SmoI | CTYRAG | 2 cut(s) | 25, 718 |
| SsiI | CCGC | 1 cut(s) | 262 |
| SspMI | CTAG | 5 cut(s) | 95, 269, 929, 990, 1019 |
| StyD4I | CCNGG | 1 cut(s) | 784 |
| StyI | CCWWGG | 1 cut(s) | 989 |
| TaiI | ACGT | 1 cut(s) | 1223 |
| TaqI | TCGA | 5 cut(s) | 17, 429, 957, 1057, 1086 |
| TatI | WGTACW | 1 cut(s) | 587 |
| TfiI | GAWTC | 4 cut(s) | 633, 724, 753, 1135 |
| Tru1I | TTAA | 4 cut(s) | 26, 353, 654, 705 |
| Tru9I | TTAA | 4 cut(s) | 26, 353, 654, 705 |
| TscAI | CASTG | 1 cut(s) | 745 |
| TseI | GCWGC | 1 cut(s) | 414 |
| TspDTI | ATGAA | 4 cut(s) | 17, 45, 708, 929 |
| TspGWI | ACGGA | 2 cut(s) | 237, 374 |
| TspRI | CASTG | 1 cut(s) | 745 |
| Vha464I | CTTAAG | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 1 cut(s) | 999 |
| VspI | ATTAAT | 1 cut(s) | 705 |
| XapI | RAATTY | 4 cut(s) | 731, 760, 795, 960 |
| XbaI | TCTAGA | 1 cut(s) | 1018 |
| XceI | RCATGY | 1 cut(s) | 572 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 696 |
| XmaJI | CCTAGG | 1 cut(s) | 989 |
| XmiI | GTMKAC | 3 cut(s) | 466, 579, 1128 |
| XspI | CTAG | 5 cut(s) | 95, 269, 929, 990, 1019 |