TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 842 |
| AarI | CACCTGC | 1 cut(s) | 1218 |
| AatII | GACGTC | 2 cut(s) | 342, 1260 |
| Acc36I | ACCTGC | 2 cut(s) | 549, 1218 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1183 |
| AccBSI | CCGCTC | 1 cut(s) | 398 |
| AccI | GTMKAC | 1 cut(s) | 1335 |
| AciI | CCGC | 4 cut(s) | 343, 369, 398, 1201 |
| AclI | AACGTT | 1 cut(s) | 588 |
| AclWI | GGATC | 1 cut(s) | 38 |
| AcsI | RAATTY | 4 cut(s) | 181, 285, 422, 833 |
| AcuI | CTGAAG | 6 cut(s) | 177, 752, 828, 1023, 1311, 1409 |
| AcyI | GRCGYC | 2 cut(s) | 339, 1257 |
| AfaI | GTAC | 3 cut(s) | 57, 879, 1074 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1183 |
| AflIII | ACRYGT | 2 cut(s) | 1264, 1543 |
| AjiI | CACGTC | 1 cut(s) | 1345 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 804, 836 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1098, 1130 |
| AluBI | AGCT | 8 cut(s) | 17, 208, 772, 869, 905, 1222, 1507, 1521 |
| AluI | AGCT | 8 cut(s) | 17, 208, 772, 869, 905, 1222, 1507, 1521 |
| Alw26I | GTCTC | 1 cut(s) | 1215 |
| AlwI | GGATC | 1 cut(s) | 38 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1507 |
| Ama87I | CYCGRG | 1 cut(s) | 1646 |
| ApeKI | GCWGC | 2 cut(s) | 22, 1507 |
| ApoI | RAATTY | 4 cut(s) | 181, 285, 422, 833 |
| AseI | ATTAAT | 1 cut(s) | 1587 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 788, 816, 1016, 1428 |
| AvaI | CYCGRG | 1 cut(s) | 1646 |
| BauI | CACGAG | 1 cut(s) | 417 |
| BbsI | GAAGAC | 4 cut(s) | 819, 851, 1159, 1260 |
| BbvI | GCAGC | 2 cut(s) | 9, 1494 |
| BceAI | ACGGC | 1 cut(s) | 1468 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1076, 1110 |
| BciVI | GTATCC | 1 cut(s) | 1476 |
| BcoDI | GTCTC | 1 cut(s) | 1215 |
| BfaI | CTAG | 3 cut(s) | 278, 690, 995 |
| BfuAI | ACCTGC | 2 cut(s) | 549, 1218 |
| BfuI | GTATCC | 1 cut(s) | 1476 |
| BglII | AGATCT | 2 cut(s) | 143, 1127 |
| BisI | GCNGC | 2 cut(s) | 23, 1508 |
| BlsI | GCNGC | 2 cut(s) | 24, 1509 |
| BmcAI | AGTACT | 2 cut(s) | 879, 1074 |
| BmeT110I | CYCGRG | 1 cut(s) | 1646 |
| BmgBI | CACGTC | 1 cut(s) | 1345 |
| BmiI | GGNNCC | 2 cut(s) | 553, 1563 |
| BmrI | ACTGGG | 2 cut(s) | 890, 947 |
| BmsI | GCATC | 1 cut(s) | 310 |
| BmuI | ACTGGG | 2 cut(s) | 890, 947 |
| BpiI | GAAGAC | 4 cut(s) | 819, 851, 1159, 1260 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 398, 430, 400, 432, 1585, 1617 |
| BpuEI | CTTGAG | 1 cut(s) | 277 |
| BsaHI | GRCGYC | 2 cut(s) | 339, 1257 |
| BsaJI | CCNNGG | 1 cut(s) | 1413 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 716, 746 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1183 |
| Bse1I | ACTGG | 5 cut(s) | 305, 885, 942, 1080, 1288 |
| Bse3DI | GCAATG | 1 cut(s) | 1026 |
| BseDI | CCNNGG | 1 cut(s) | 1413 |
| BseGI | GGATG | 3 cut(s) | 121, 301, 340 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1183 |
| BseMI | GCAATG | 1 cut(s) | 1026 |
| BseMII | CTCAG | 2 cut(s) | 1514, 1583 |
| BseNI | ACTGG | 5 cut(s) | 305, 885, 942, 1080, 1288 |
| BseXI | GCAGC | 2 cut(s) | 9, 1494 |
| BseYI | CCCAGC | 1 cut(s) | 1222 |
| BsgI | GTGCAG | 1 cut(s) | 1252 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1646 |
| BsiSI | CCGG | 1 cut(s) | 781 |
| BslFI | GGGAC | 2 cut(s) | 1200, 1431 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1183 |
| BsmAI | GTCTC | 1 cut(s) | 1215 |
| BsmFI | GGGAC | 2 cut(s) | 1200, 1431 |
| BsmI | GAATGC | 2 cut(s) | 86, 788 |
| BsoBI | CYCGRG | 1 cut(s) | 1646 |
| Bsp143I | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| BspACI | CCGC | 4 cut(s) | 343, 369, 398, 1201 |
| BspCNI | CTCAG | 2 cut(s) | 1513, 1584 |
| BspHI | TCATGA | 1 cut(s) | 97 |
| BspLI | GGNNCC | 2 cut(s) | 553, 1563 |
| BspMI | ACCTGC | 2 cut(s) | 549, 1218 |
| BspPI | GGATC | 1 cut(s) | 38 |
| BsrBI | CCGCTC | 1 cut(s) | 398 |
| BsrDI | GCAATG | 1 cut(s) | 1026 |
| BsrI | ACTGG | 5 cut(s) | 305, 885, 942, 1080, 1288 |
| BssECI | CCNNGG | 1 cut(s) | 1413 |
| BssMI | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| BssNI | GRCGYC | 2 cut(s) | 339, 1257 |
| BssSI | CACGAG | 1 cut(s) | 417 |
| BssT1I | CCWWGG | 1 cut(s) | 1413 |
| Bst2BI | CACGAG | 1 cut(s) | 417 |
| Bst4CI | ACNGT | 4 cut(s) | 263, 923, 992, 1141 |
| Bst6I | CTCTTC | 3 cut(s) | 771, 937, 999 |
| BstACI | GRCGYC | 2 cut(s) | 339, 1257 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1171 |
| BstDEI | CTNAG | 3 cut(s) | 1500, 1517, 1592 |
| BstF5I | GGATG | 3 cut(s) | 121, 301, 340 |
| BstKTI | GATC | 4 cut(s) | 46, 146, 1060, 1130 |
| BstMAI | GTCTC | 1 cut(s) | 1215 |
| BstMBI | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 524, 1171 |
| BstNSI | RCATGY | 3 cut(s) | 1035, 1268, 1547 |
| BstV1I | GCAGC | 2 cut(s) | 9, 1494 |
| BstV2I | GAAGAC | 4 cut(s) | 819, 851, 1159, 1260 |
| BstX2I | RGATCY | 2 cut(s) | 143, 1127 |
| BstYI | RGATCY | 2 cut(s) | 143, 1127 |
| BsuI | GTATCC | 1 cut(s) | 1476 |
| BtrI | CACGTC | 1 cut(s) | 1345 |
| BtsCI | GGATG | 3 cut(s) | 121, 301, 340 |
| BtsIMutI | CAGTG | 1 cut(s) | 928 |
| BveI | ACCTGC | 2 cut(s) | 549, 1218 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1507 |
| CciI | TCATGA | 1 cut(s) | 97 |
| Csp6I | GTAC | 3 cut(s) | 56, 878, 1073 |
| CviAII | CATG | 9 cut(s) | 69, 98, 545, 716, 1032, 1148, 1265, 1339, 1544 |
| CviQI | GTAC | 3 cut(s) | 56, 878, 1073 |
| DdeI | CTNAG | 3 cut(s) | 1500, 1517, 1592 |
| DpnI | GATC | 4 cut(s) | 45, 145, 1059, 1129 |
| DpnII | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| DraI | TTTAAA | 1 cut(s) | 1630 |
| Eam1104I | CTCTTC | 3 cut(s) | 771, 937, 999 |
| EarI | CTCTTC | 3 cut(s) | 771, 937, 999 |
| EciI | GGCGGA | 1 cut(s) | 1190 |
| Eco130I | CCWWGG | 1 cut(s) | 1413 |
| Eco57I | CTGAAG | 6 cut(s) | 177, 752, 828, 1023, 1311, 1409 |
| Eco88I | CYCGRG | 1 cut(s) | 1646 |
| EcoRI | GAATTC | 1 cut(s) | 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 1413 |
| ErhI | CCWWGG | 1 cut(s) | 1413 |
| FaeI | CATG | 9 cut(s) | 72, 101, 548, 719, 1035, 1151, 1268, 1342, 1547 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 804, 836 |
| FaqI | GGGAC | 2 cut(s) | 1200, 1431 |
| FatI | CATG | 9 cut(s) | 68, 97, 544, 715, 1031, 1147, 1264, 1338, 1543 |
| FauI | CCCGC | 1 cut(s) | 362 |
| FblI | GTMKAC | 1 cut(s) | 1335 |
| Fnu4HI | GCNGC | 2 cut(s) | 23, 1508 |
| FokI | GGATG | 3 cut(s) | 128, 288, 347 |
| Fsp4HI | GCNGC | 2 cut(s) | 23, 1508 |
| FspBI | CTAG | 3 cut(s) | 278, 690, 995 |
| GluI | GCNGC | 2 cut(s) | 23, 1508 |
| GsaI | CCCAGC | 1 cut(s) | 1226 |
| HapII | CCGG | 1 cut(s) | 781 |
| Hin1I | GRCGYC | 2 cut(s) | 339, 1257 |
| Hin1II | CATG | 9 cut(s) | 72, 101, 548, 719, 1035, 1151, 1268, 1342, 1547 |
| HincII | GTYRAC | 1 cut(s) | 1690 |
| HindII | GTYRAC | 1 cut(s) | 1690 |
| HpaII | CCGG | 1 cut(s) | 781 |
| Hpy166II | GTNNAC | 4 cut(s) | 479, 613, 1336, 1690 |
| Hpy188I | TCNGA | 7 cut(s) | 52, 1003, 1353, 1503, 1551, 1593, 1605 |
| Hpy8I | GTNNAC | 4 cut(s) | 479, 613, 1336, 1690 |
| HpyAV | CCTTC | 5 cut(s) | 129, 542, 723, 730, 1295 |
| HpyCH4III | ACNGT | 4 cut(s) | 263, 923, 992, 1141 |
| HpyCH4IV | ACGT | 6 cut(s) | 39, 339, 577, 588, 1257, 1344 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 524, 1171 |
| HpyF3I | CTNAG | 3 cut(s) | 1500, 1517, 1592 |
| HpySE526I | ACGT | 6 cut(s) | 39, 339, 577, 588, 1257, 1344 |
| Hsp92I | GRCGYC | 2 cut(s) | 339, 1257 |
| Hsp92II | CATG | 9 cut(s) | 72, 101, 548, 719, 1035, 1151, 1268, 1342, 1547 |
| Kzo9I | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| LmnI | GCTCC | 3 cut(s) | 551, 1179, 1561 |
| Lsp1109I | GCAGC | 2 cut(s) | 9, 1494 |
| LweI | GCATC | 1 cut(s) | 310 |
| MaeI | CTAG | 3 cut(s) | 278, 690, 995 |
| MaeII | ACGT | 6 cut(s) | 39, 339, 577, 588, 1257, 1344 |
| MaeIII | GTNAC | 4 cut(s) | 578, 950, 1345, 1485 |
| MalI | GATC | 4 cut(s) | 45, 145, 1059, 1129 |
| MbiI | CCGCTC | 1 cut(s) | 398 |
| MboI | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| MfeI | CAATTG | 1 cut(s) | 1698 |
| MflI | RGATCY | 2 cut(s) | 143, 1127 |
| MlyI | GAGTC | 5 cut(s) | 1217, 1310, 1334, 1342, 1603 |
| MmeI | TCCRAC | 1 cut(s) | 262 |
| MnlI | CCTC | 7 cut(s) | 58, 112, 561, 791, 1455, 1509, 1678 |
| MroXI | GAANNNNTTC | 4 cut(s) | 788, 816, 1016, 1428 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1343 |
| MspI | CCGG | 1 cut(s) | 781 |
| MunI | CAATTG | 1 cut(s) | 1698 |
| Mva1269I | GAATGC | 2 cut(s) | 86, 788 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 524, 1171 |
| NdeII | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| NlaIII | CATG | 9 cut(s) | 72, 101, 548, 719, 1035, 1151, 1268, 1342, 1547 |
| NlaIV | GGNNCC | 2 cut(s) | 553, 1563 |
| NmuCI | GTSAC | 3 cut(s) | 578, 1345, 1485 |
| NspI | RCATGY | 3 cut(s) | 1035, 1268, 1547 |
| PaeR7I | CTCGAG | 1 cut(s) | 1646 |
| PagI | TCATGA | 1 cut(s) | 97 |
| PaqCI | CACCTGC | 1 cut(s) | 1218 |
| PciI | ACATGT | 2 cut(s) | 1264, 1543 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1466 |
| PctI | GAATGC | 2 cut(s) | 86, 788 |
| PdmI | GAANNNNTTC | 4 cut(s) | 788, 816, 1016, 1428 |
| PfeI | GAWTC | 6 cut(s) | 200, 411, 761, 998, 1447, 1606 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1183 |
| PkrI | GCNGC | 2 cut(s) | 24, 1509 |
| PleI | GAGTC | 5 cut(s) | 1216, 1310, 1333, 1342, 1602 |
| PpsI | GAGTC | 5 cut(s) | 1216, 1310, 1333, 1342, 1602 |
| PscI | ACATGT | 2 cut(s) | 1264, 1543 |
| PshBI | ATTAAT | 1 cut(s) | 1587 |
| PsiI | TTATAA | 1 cut(s) | 842 |
| Psp1406I | AACGTT | 1 cut(s) | 588 |
| PspFI | CCCAGC | 1 cut(s) | 1222 |
| PspN4I | GGNNCC | 2 cut(s) | 553, 1563 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1507 |
| PsuI | RGATCY | 2 cut(s) | 143, 1127 |
| RsaI | GTAC | 3 cut(s) | 57, 879, 1074 |
| RsaNI | GTAC | 3 cut(s) | 56, 878, 1073 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1343 |
| SatI | GCNGC | 2 cut(s) | 23, 1508 |
| Sau3AI | GATC | 4 cut(s) | 43, 143, 1057, 1127 |
| ScaI | AGTACT | 2 cut(s) | 879, 1074 |
| SchI | GAGTC | 5 cut(s) | 1217, 1310, 1334, 1342, 1603 |
| SfaNI | GCATC | 1 cut(s) | 310 |
| Sfr274I | CTCGAG | 1 cut(s) | 1646 |
| SlaI | CTCGAG | 1 cut(s) | 1646 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1343 |
| SmlI | CTYRAG | 2 cut(s) | 292, 1646 |
| SmoI | CTYRAG | 2 cut(s) | 292, 1646 |
| SsiI | CCGC | 4 cut(s) | 343, 369, 398, 1201 |
| SspI | AATATT | 3 cut(s) | 30, 635, 1017 |
| SspMI | CTAG | 3 cut(s) | 278, 690, 995 |
| StyI | CCWWGG | 1 cut(s) | 1413 |
| TaaI | ACNGT | 4 cut(s) | 263, 923, 992, 1141 |
| TaiI | ACGT | 6 cut(s) | 42, 342, 580, 591, 1260, 1347 |
| TaqI | TCGA | 2 cut(s) | 1060, 1647 |
| TatI | WGTACW | 2 cut(s) | 877, 1072 |
| TfiI | GAWTC | 6 cut(s) | 200, 411, 761, 998, 1447, 1606 |
| TscAI | CASTG | 1 cut(s) | 928 |
| TseFI | GTSAC | 3 cut(s) | 578, 1345, 1485 |
| TseI | GCWGC | 2 cut(s) | 22, 1507 |
| Tsp45I | GTSAC | 3 cut(s) | 578, 1345, 1485 |
| TspDTI | ATGAA | 6 cut(s) | 17, 114, 213, 337, 561, 1385 |
| TspGWI | ACGGA | 3 cut(s) | 451, 1458, 1574 |
| TspRI | CASTG | 1 cut(s) | 928 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1183 |
| VspI | ATTAAT | 1 cut(s) | 1587 |
| XapI | RAATTY | 4 cut(s) | 181, 285, 422, 833 |
| XbaI | TCTAGA | 1 cut(s) | 994 |
| XceI | RCATGY | 3 cut(s) | 1035, 1268, 1547 |
| XhoI | CTCGAG | 1 cut(s) | 1646 |
| XmiI | GTMKAC | 1 cut(s) | 1335 |
| XmnI | GAANNNNTTC | 4 cut(s) | 788, 816, 1016, 1428 |
| XspI | CTAG | 3 cut(s) | 278, 690, 995 |
| ZraI | GACGTC | 2 cut(s) | 340, 1258 |
| ZrmI | AGTACT | 2 cut(s) | 879, 1074 |