Belongs to the ubiquitin-conjugating enzyme family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CTP_transf_1 | PF01148 | 53 - 383 | 2.2e-78 | Cytidylyltransferase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 476 |
| AccI | GTMKAC | 1 cut(s) | 64 |
| AciI | CCGC | 2 cut(s) | 55, 684 |
| AclWI | GGATC | 3 cut(s) | 559, 857, 944 |
| AcoI | YGGCCR | 1 cut(s) | 541 |
| AcsI | RAATTY | 3 cut(s) | 416, 621, 1176 |
| AcuI | CTGAAG | 1 cut(s) | 393 |
| AcyI | GRCGYC | 1 cut(s) | 307 |
| AfaI | GTAC | 2 cut(s) | 479, 527 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 932, 1007, 1076 |
| AflII | CTTAAG | 1 cut(s) | 283 |
| AgeI | ACCGGT | 1 cut(s) | 845 |
| AgsI | TTSAA | 6 cut(s) | 514, 617, 812, 956, 1042, 1175 |
| AjnI | CCWGG | 4 cut(s) | 313, 865, 901, 1069 |
| AluBI | AGCT | 8 cut(s) | 74, 271, 293, 755, 1037, 1165, 1226, 1240 |
| AluI | AGCT | 8 cut(s) | 74, 271, 293, 755, 1037, 1165, 1226, 1240 |
| Alw21I | GWGCWC | 2 cut(s) | 273, 295 |
| Alw26I | GTCTC | 1 cut(s) | 314 |
| AlwI | GGATC | 3 cut(s) | 559, 857, 944 |
| Ama87I | CYCGRG | 1 cut(s) | 1211 |
| AoxI | GGCC | 2 cut(s) | 214, 541 |
| ApeKI | GCWGC | 3 cut(s) | 671, 1216, 1219 |
| ApoI | RAATTY | 3 cut(s) | 416, 621, 1176 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 367, 399 |
| AseI | ATTAAT | 1 cut(s) | 200 |
| AsiGI | ACCGGT | 1 cut(s) | 845 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 921 |
| AspS9I | GGNCC | 4 cut(s) | 42, 214, 869, 1186 |
| AsuC2I | CCSGG | 1 cut(s) | 914 |
| AsuHPI | GGTGA | 1 cut(s) | 1070 |
| AvaI | CYCGRG | 1 cut(s) | 1211 |
| AvaII | GGWCC | 3 cut(s) | 42, 869, 1186 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 872, 905 |
| BalI | TGGCCA | 1 cut(s) | 543 |
| BanII | GRGCYC | 2 cut(s) | 273, 295 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 509, 541 |
| Bbv12I | GWGCWC | 2 cut(s) | 273, 295 |
| BbvI | GCAGC | 3 cut(s) | 658, 1228, 1231 |
| BccI | CCATC | 4 cut(s) | 37, 225, 900, 1102 |
| BceAI | ACGGC | 1 cut(s) | 404 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 1249 |
| BciT130I | CCWGG | 4 cut(s) | 315, 867, 903, 1071 |
| BciVI | GTATCC | 1 cut(s) | 1076 |
| BcnI | CCSGG | 1 cut(s) | 914 |
| BcoDI | GTCTC | 1 cut(s) | 314 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BfmI | CTRYAG | 1 cut(s) | 600 |
| BfrI | CTTAAG | 1 cut(s) | 283 |
| BfuAI | ACCTGC | 1 cut(s) | 476 |
| BfuI | GTATCC | 1 cut(s) | 1076 |
| BisI | GCNGC | 5 cut(s) | 56, 672, 685, 1217, 1220 |
| BlpI | GCTNAGC | 2 cut(s) | 70, 75 |
| BlsI | GCNGC | 5 cut(s) | 57, 673, 686, 1218, 1221 |
| Bme1390I | CCNGG | 5 cut(s) | 315, 867, 903, 914, 1071 |
| Bme18I | GGWCC | 3 cut(s) | 42, 869, 1186 |
| BmeT110I | CYCGRG | 1 cut(s) | 1211 |
| BmgT120I | GGNCC | 4 cut(s) | 42, 214, 869, 1186 |
| BmiI | GGNNCC | 2 cut(s) | 44, 911 |
| BmrFI | CCNGG | 5 cut(s) | 315, 867, 903, 914, 1071 |
| BmsI | GCATC | 3 cut(s) | 67, 82, 345 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 70, 75 |
| BpuMI | CCSGG | 1 cut(s) | 914 |
| BsaHI | GRCGYC | 1 cut(s) | 307 |
| BsaJI | CCNNGG | 6 cut(s) | 38, 234, 313, 926, 1069, 1070 |
| BsaWI | WCCGGW | 1 cut(s) | 845 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 932, 1007, 1076 |
| Bse118I | RCCGGY | 1 cut(s) | 845 |
| Bse1I | ACTGG | 3 cut(s) | 448, 544, 950 |
| BseBI | CCWGG | 4 cut(s) | 315, 867, 903, 1071 |
| BseDI | CCNNGG | 6 cut(s) | 38, 234, 313, 926, 1069, 1070 |
| BseGI | GGATG | 2 cut(s) | 186, 911 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 932, 1007, 1076 |
| BseMII | CTCAG | 4 cut(s) | 66, 84, 394, 789 |
| BseNI | ACTGG | 3 cut(s) | 448, 544, 950 |
| BseXI | GCAGC | 3 cut(s) | 658, 1228, 1231 |
| Bsh1285I | CGRYCG | 1 cut(s) | 373 |
| BshFI | GGCC | 2 cut(s) | 216, 543 |
| BshTI | ACCGGT | 1 cut(s) | 845 |
| BsiEI | CGRYCG | 1 cut(s) | 373 |
| BsiHKAI | GWGCWC | 2 cut(s) | 273, 295 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1211 |
| BsiSI | CCGG | 2 cut(s) | 846, 914 |
| BslFI | GGGAC | 2 cut(s) | 28, 816 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 932, 1007, 1076 |
| BsmAI | GTCTC | 1 cut(s) | 314 |
| BsmBI | CGTCTC | 1 cut(s) | 314 |
| BsmFI | GGGAC | 2 cut(s) | 28, 816 |
| BsnI | GGCC | 2 cut(s) | 216, 543 |
| BsoBI | CYCGRG | 1 cut(s) | 1211 |
| Bsp1286I | GDGCHC | 2 cut(s) | 273, 295 |
| Bsp1407I | TGTACA | 2 cut(s) | 477, 525 |
| Bsp143I | GATC | 3 cut(s) | 564, 862, 936 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 70, 75 |
| Bsp19I | CCATGG | 1 cut(s) | 234 |
| BspACI | CCGC | 2 cut(s) | 55, 684 |
| BspANI | GGCC | 2 cut(s) | 216, 543 |
| BspCNI | CTCAG | 4 cut(s) | 67, 83, 393, 788 |
| BspHI | TCATGA | 1 cut(s) | 295 |
| BspLI | GGNNCC | 2 cut(s) | 44, 911 |
| BspMI | ACCTGC | 1 cut(s) | 476 |
| BspPI | GGATC | 3 cut(s) | 559, 857, 944 |
| BspTI | CTTAAG | 1 cut(s) | 283 |
| BsrFI | RCCGGY | 1 cut(s) | 845 |
| BsrGI | TGTACA | 2 cut(s) | 477, 525 |
| BsrI | ACTGG | 3 cut(s) | 448, 544, 950 |
| BssAI | RCCGGY | 1 cut(s) | 845 |
| BssECI | CCNNGG | 6 cut(s) | 38, 234, 313, 926, 1069, 1070 |
| BssMI | GATC | 3 cut(s) | 564, 862, 936 |
| BssNI | GRCGYC | 1 cut(s) | 307 |
| BssT1I | CCWWGG | 3 cut(s) | 38, 234, 926 |
| Bst2UI | CCWGG | 4 cut(s) | 315, 867, 903, 1071 |
| Bst4CI | ACNGT | 7 cut(s) | 175, 371, 403, 588, 601, 860, 1064 |
| BstACI | GRCGYC | 1 cut(s) | 307 |
| BstAFI | CTTAAG | 1 cut(s) | 283 |
| BstAUI | TGTACA | 2 cut(s) | 477, 525 |
| BstC8I | GCNNGC | 5 cut(s) | 466, 789, 963, 1224, 1262 |
| BstDEI | CTNAG | 4 cut(s) | 70, 75, 380, 775 |
| BstDSI | CCRYGG | 1 cut(s) | 234 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 930, 1005 |
| BstF5I | GGATG | 2 cut(s) | 186, 911 |
| BstKTI | GATC | 3 cut(s) | 567, 865, 939 |
| BstMAI | GTCTC | 1 cut(s) | 314 |
| BstMBI | GATC | 3 cut(s) | 564, 862, 936 |
| BstMCI | CGRYCG | 1 cut(s) | 373 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 230, 1124, 1162, 1261 |
| BstNI | CCWGG | 4 cut(s) | 315, 867, 903, 1071 |
| BstNSI | RCATGY | 1 cut(s) | 965 |
| BstSCI | CCNGG | 5 cut(s) | 313, 865, 901, 912, 1069 |
| BstSFI | CTRYAG | 1 cut(s) | 600 |
| BstV1I | GCAGC | 3 cut(s) | 658, 1228, 1231 |
| BstX2I | RGATCY | 1 cut(s) | 936 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 957 |
| BstYI | RGATCY | 1 cut(s) | 936 |
| BsuI | GTATCC | 1 cut(s) | 1076 |
| BsuRI | GGCC | 2 cut(s) | 216, 543 |
| BtgI | CCRYGG | 1 cut(s) | 234 |
| BtgZI | GCGATG | 2 cut(s) | 368, 466 |
| BtsCI | GGATG | 2 cut(s) | 186, 911 |
| BtsI | GCAGTG | 1 cut(s) | 348 |
| BtsIMutI | CAGTG | 3 cut(s) | 348, 399, 856 |
| BveI | ACCTGC | 1 cut(s) | 476 |
| Cac8I | GCNNGC | 5 cut(s) | 466, 789, 963, 1224, 1262 |
| CciI | TCATGA | 1 cut(s) | 295 |
| Cfr10I | RCCGGY | 1 cut(s) | 845 |
| Cfr13I | GGNCC | 4 cut(s) | 42, 214, 869, 1186 |
| CseI | GACGC | 2 cut(s) | 75, 296 |
| Csp6I | GTAC | 2 cut(s) | 478, 526 |
| CspAI | ACCGGT | 1 cut(s) | 845 |
| CviAII | CATG | 8 cut(s) | 235, 259, 296, 552, 562, 799, 962, 1076 |
| CviQI | GTAC | 2 cut(s) | 478, 526 |
| DdeI | CTNAG | 4 cut(s) | 70, 75, 380, 775 |
| DpnI | GATC | 3 cut(s) | 566, 864, 938 |
| DpnII | GATC | 3 cut(s) | 564, 862, 936 |
| DraI | TTTAAA | 1 cut(s) | 1030 |
| EaeI | YGGCCR | 1 cut(s) | 541 |
| Ecl136II | GAGCTC | 2 cut(s) | 271, 293 |
| Eco130I | CCWWGG | 3 cut(s) | 38, 234, 926 |
| Eco24I | GRGCYC | 2 cut(s) | 273, 295 |
| Eco32I | GATATC | 1 cut(s) | 720 |
| Eco47I | GGWCC | 3 cut(s) | 42, 869, 1186 |
| Eco53kI | GAGCTC | 2 cut(s) | 271, 293 |
| Eco57I | CTGAAG | 1 cut(s) | 393 |
| Eco88I | CYCGRG | 1 cut(s) | 1211 |
| EcoICRI | GAGCTC | 2 cut(s) | 271, 293 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 930, 1005 |
| EcoO109I | RGGNCCY | 1 cut(s) | 42 |
| EcoRII | CCWGG | 4 cut(s) | 313, 865, 901, 1069 |
| EcoRV | GATATC | 1 cut(s) | 720 |
| EcoT14I | CCWWGG | 3 cut(s) | 38, 234, 926 |
| EcoT22I | ATGCAT | 1 cut(s) | 553 |
| EcoT38I | GRGCYC | 2 cut(s) | 273, 295 |
| ErhI | CCWWGG | 3 cut(s) | 38, 234, 926 |
| Esp3I | CGTCTC | 1 cut(s) | 314 |
| FaeI | CATG | 8 cut(s) | 238, 262, 299, 555, 565, 802, 965, 1079 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 257, 289, 691, 723 |
| FaqI | GGGAC | 2 cut(s) | 28, 816 |
| FatI | CATG | 8 cut(s) | 234, 258, 295, 551, 561, 798, 961, 1075 |
| FauNDI | CATATG | 1 cut(s) | 456 |
| FblI | GTMKAC | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 5 cut(s) | 56, 672, 685, 1217, 1220 |
| FokI | GGATG | 2 cut(s) | 193, 918 |
| FriOI | GRGCYC | 2 cut(s) | 273, 295 |
| Fsp4HI | GCNGC | 5 cut(s) | 56, 672, 685, 1217, 1220 |
| FspBI | CTAG | 1 cut(s) | 96 |
| GluI | GCNGC | 5 cut(s) | 56, 672, 685, 1217, 1220 |
| HaeIII | GGCC | 2 cut(s) | 216, 543 |
| HapII | CCGG | 2 cut(s) | 846, 914 |
| HgaI | GACGC | 2 cut(s) | 75, 296 |
| Hin1I | GRCGYC | 1 cut(s) | 307 |
| Hin1II | CATG | 8 cut(s) | 238, 262, 299, 555, 565, 802, 965, 1079 |
| HincII | GTYRAC | 2 cut(s) | 386, 397 |
| HindII | GTYRAC | 2 cut(s) | 386, 397 |
| HindIII | AAGCTT | 1 cut(s) | 1238 |
| HinfI | GANTC | 3 cut(s) | 157, 318, 1083 |
| HpaI | GTTAAC | 1 cut(s) | 397 |
| HpaII | CCGG | 2 cut(s) | 846, 914 |
| HphI | GGTGA | 1 cut(s) | 1070 |
| Hpy166II | GTNNAC | 6 cut(s) | 65, 367, 386, 397, 582, 879 |
| Hpy188I | TCNGA | 3 cut(s) | 412, 1107, 1271 |
| Hpy188III | TCNNGA | 2 cut(s) | 296, 1211 |
| Hpy8I | GTNNAC | 6 cut(s) | 65, 367, 386, 397, 582, 879 |
| HpyAV | CCTTC | 1 cut(s) | 611 |
| HpyCH4III | ACNGT | 7 cut(s) | 175, 371, 403, 588, 601, 860, 1064 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 197, 551, 791, 1019, 1255 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 230, 1124, 1162, 1261 |
| HpyF3I | CTNAG | 4 cut(s) | 70, 75, 380, 775 |
| Hsp92I | GRCGYC | 1 cut(s) | 307 |
| Hsp92II | CATG | 8 cut(s) | 238, 262, 299, 555, 565, 802, 965, 1079 |
| KspAI | GTTAAC | 1 cut(s) | 397 |
| Kzo9I | GATC | 3 cut(s) | 564, 862, 936 |
| LmnI | GCTCC | 3 cut(s) | 268, 752, 915 |
| Lsp1109I | GCAGC | 3 cut(s) | 658, 1228, 1231 |
| LweI | GCATC | 3 cut(s) | 67, 82, 345 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MaeIII | GTNAC | 3 cut(s) | 98, 403, 1058 |
| MalI | GATC | 3 cut(s) | 566, 864, 938 |
| MboI | GATC | 3 cut(s) | 564, 862, 936 |
| MflI | RGATCY | 1 cut(s) | 936 |
| MhlI | GDGCHC | 2 cut(s) | 273, 295 |
| MlsI | TGGCCA | 1 cut(s) | 543 |
| MluNI | TGGCCA | 1 cut(s) | 543 |
| MnlI | CCTC | 6 cut(s) | 104, 182, 601, 733, 1001, 1167 |
| Mox20I | TGGCCA | 1 cut(s) | 543 |
| Mph1103I | ATGCAT | 1 cut(s) | 553 |
| MroXI | GAANNNNTTC | 1 cut(s) | 921 |
| MscI | TGGCCA | 1 cut(s) | 543 |
| MseI | TTAA | 8 cut(s) | 200, 276, 284, 329, 396, 714, 1029, 1242 |
| MslI | CAYNNNNRTG | 1 cut(s) | 353 |
| Msp20I | TGGCCA | 1 cut(s) | 543 |
| MspA1I | CMGCKG | 1 cut(s) | 74 |
| MspCI | CTTAAG | 1 cut(s) | 283 |
| MspI | CCGG | 2 cut(s) | 846, 914 |
| MspR9I | CCNGG | 5 cut(s) | 315, 867, 903, 914, 1071 |
| MvaI | CCWGG | 4 cut(s) | 315, 867, 903, 1071 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 230, 1124, 1162, 1261 |
| NciI | CCSGG | 1 cut(s) | 914 |
| NcoI | CCATGG | 1 cut(s) | 234 |
| NdeI | CATATG | 1 cut(s) | 456 |
| NdeII | GATC | 3 cut(s) | 564, 862, 936 |
| NlaIII | CATG | 8 cut(s) | 238, 262, 299, 555, 565, 802, 965, 1079 |
| NlaIV | GGNNCC | 2 cut(s) | 44, 911 |
| NmuCI | GTSAC | 1 cut(s) | 1058 |
| NsiI | ATGCAT | 1 cut(s) | 553 |
| NspI | RCATGY | 1 cut(s) | 965 |
| PaeI | GCATGC | 1 cut(s) | 965 |
| PaeR7I | CTCGAG | 1 cut(s) | 1211 |
| PagI | TCATGA | 1 cut(s) | 295 |
| PasI | CCCWGGG | 1 cut(s) | 1070 |
| PdmI | GAANNNNTTC | 1 cut(s) | 921 |
| PfeI | GAWTC | 3 cut(s) | 157, 318, 1083 |
| PfoI | TCCNGGA | 1 cut(s) | 912 |
| PinAI | ACCGGT | 1 cut(s) | 845 |
| PkrI | GCNGC | 5 cut(s) | 57, 673, 686, 1218, 1221 |
| PpuMI | RGGWCCY | 1 cut(s) | 42 |
| PshBI | ATTAAT | 1 cut(s) | 200 |
| Psp124BI | GAGCTC | 2 cut(s) | 273, 295 |
| Psp5II | RGGWCCY | 1 cut(s) | 42 |
| Psp6I | CCWGG | 4 cut(s) | 313, 865, 901, 1069 |
| PspGI | CCWGG | 4 cut(s) | 313, 865, 901, 1069 |
| PspN4I | GGNNCC | 2 cut(s) | 44, 911 |
| PspPI | GGNCC | 4 cut(s) | 42, 214, 869, 1186 |
| PspPPI | RGGWCCY | 1 cut(s) | 42 |
| PsuI | RGATCY | 1 cut(s) | 936 |
| PvuII | CAGCTG | 1 cut(s) | 74 |
| RsaI | GTAC | 2 cut(s) | 479, 527 |
| RsaNI | GTAC | 2 cut(s) | 478, 526 |
| RseI | CAYNNNNRTG | 1 cut(s) | 353 |
| SacI | GAGCTC | 2 cut(s) | 273, 295 |
| SaqAI | TTAA | 8 cut(s) | 200, 276, 284, 329, 396, 714, 1029, 1242 |
| SatI | GCNGC | 5 cut(s) | 56, 672, 685, 1217, 1220 |
| Sau3AI | GATC | 3 cut(s) | 564, 862, 936 |
| Sau96I | GGNCC | 4 cut(s) | 42, 214, 869, 1186 |
| ScrFI | CCNGG | 5 cut(s) | 315, 867, 903, 914, 1071 |
| SduI | GDGCHC | 2 cut(s) | 273, 295 |
| SfaNI | GCATC | 3 cut(s) | 67, 82, 345 |
| SfcI | CTRYAG | 1 cut(s) | 600 |
| Sfr274I | CTCGAG | 1 cut(s) | 1211 |
| SinI | GGWCC | 3 cut(s) | 42, 869, 1186 |
| SlaI | CTCGAG | 1 cut(s) | 1211 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 353 |
| SmlI | CTYRAG | 2 cut(s) | 283, 1211 |
| SmoI | CTYRAG | 2 cut(s) | 283, 1211 |
| SphI | GCATGC | 1 cut(s) | 965 |
| SsiI | CCGC | 2 cut(s) | 55, 684 |
| SspMI | CTAG | 1 cut(s) | 96 |
| SstI | GAGCTC | 2 cut(s) | 273, 295 |
| StyD4I | CCNGG | 5 cut(s) | 313, 865, 901, 912, 1069 |
| StyI | CCWWGG | 3 cut(s) | 38, 234, 926 |
| TaaI | ACNGT | 7 cut(s) | 175, 371, 403, 588, 601, 860, 1064 |
| TaqI | TCGA | 2 cut(s) | 373, 1212 |
| TatI | WGTACW | 2 cut(s) | 477, 525 |
| TauI | GCSGC | 2 cut(s) | 58, 687 |
| TfiI | GAWTC | 3 cut(s) | 157, 318, 1083 |
| Tru1I | TTAA | 8 cut(s) | 200, 276, 284, 329, 396, 714, 1029, 1242 |
| Tru9I | TTAA | 8 cut(s) | 200, 276, 284, 329, 396, 714, 1029, 1242 |
| TscAI | CASTG | 3 cut(s) | 355, 406, 863 |
| TseFI | GTSAC | 1 cut(s) | 1058 |
| TseI | GCWGC | 3 cut(s) | 671, 1216, 1219 |
| Tsp45I | GTSAC | 1 cut(s) | 1058 |
| TspDTI | ATGAA | 5 cut(s) | 247, 312, 490, 736, 975 |
| TspRI | CASTG | 3 cut(s) | 355, 406, 863 |
| Vha464I | CTTAAG | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 3 cut(s) | 42, 869, 1186 |
| VspI | ATTAAT | 1 cut(s) | 200 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 930, 1005 |
| XapI | RAATTY | 3 cut(s) | 416, 621, 1176 |
| XceI | RCATGY | 1 cut(s) | 965 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 732 |
| XhoI | CTCGAG | 1 cut(s) | 1211 |
| XmiI | GTMKAC | 1 cut(s) | 64 |
| XmnI | GAANNNNTTC | 1 cut(s) | 921 |
| XspI | CTAG | 1 cut(s) | 96 |
| Zsp2I | ATGCAT | 1 cut(s) | 553 |