TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 193 | 1.6e-55 | TIR domain |
| TIR_2 | PF13676 | 21 - 116 | 3.3e-14 | TIR domain |
| NB-ARC | PF00931 | 211 - 366 | 4.2e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 428 - 494 | 6.7e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 562 - 655 | 4.7e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 679 - 751 | 6.4e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 143, 863, 1142 |
| AarI | CACCTGC | 1 cut(s) | 1488 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 2010, 2211 |
| AatII | GACGTC | 1 cut(s) | 642 |
| Acc36I | ACCTGC | 2 cut(s) | 1488, 1830 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1453 |
| AccBSI | CCGCTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 2 cut(s) | 778, 828 |
| AciI | CCGC | 6 cut(s) | 643, 669, 698, 1471, 2086, 2483 |
| AclWI | GGATC | 6 cut(s) | 152, 338, 1605, 2082, 2328, 2343 |
| AcoI | YGGCCR | 1 cut(s) | 2191 |
| AcsI | RAATTY | 6 cut(s) | 288, 481, 722, 1046, 1260, 2142 |
| AcuI | CTGAAG | 3 cut(s) | 1128, 2201, 2321 |
| AcyI | GRCGYC | 1 cut(s) | 639 |
| AfaI | GTAC | 3 cut(s) | 357, 1179, 2438 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 864, 1453, 2440, 2573 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 564, 596 |
| AleI | CACNNNNGTG | 1 cut(s) | 2386 |
| Alw26I | GTCTC | 1 cut(s) | 436 |
| AlwI | GGATC | 6 cut(s) | 152, 338, 1605, 2082, 2328, 2343 |
| Ama87I | CYCGRG | 1 cut(s) | 1637 |
| AoxI | GGCC | 4 cut(s) | 1099, 1156, 2191, 2665 |
| ApeKI | GCWGC | 3 cut(s) | 203, 601, 2600 |
| ApoI | RAATTY | 6 cut(s) | 288, 481, 722, 1046, 1260, 2142 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1932, 2214 |
| AspLEI | GCGC | 1 cut(s) | 2663 |
| AspS9I | GGNCC | 2 cut(s) | 2503, 2666 |
| AsuC2I | CCSGG | 1 cut(s) | 1475 |
| AsuHPI | GGTGA | 1 cut(s) | 2300 |
| AvaI | CYCGRG | 1 cut(s) | 1637 |
| AvaII | GGWCC | 1 cut(s) | 2503 |
| BaeGI | GKGCMC | 1 cut(s) | 1896 |
| BbsI | GAAGAC | 5 cut(s) | 642, 1429, 1530, 1742, 2207 |
| BbvI | GCAGC | 3 cut(s) | 190, 613, 2612 |
| BccI | CCATC | 3 cut(s) | 1384, 2269, 2651 |
| BciVI | GTATCC | 1 cut(s) | 79 |
| BclI | TGATCA | 1 cut(s) | 2365 |
| BcnI | CCSGG | 1 cut(s) | 1475 |
| BcoDI | GTCTC | 1 cut(s) | 436 |
| BfaI | CTAG | 6 cut(s) | 578, 990, 1292, 2049, 2202, 2607 |
| BfuAI | ACCTGC | 2 cut(s) | 1488, 1830 |
| BfuI | GTATCC | 1 cut(s) | 79 |
| BglII | AGATCT | 2 cut(s) | 1204, 1397 |
| BisI | GCNGC | 3 cut(s) | 204, 602, 2601 |
| BlsI | GCNGC | 3 cut(s) | 205, 603, 2602 |
| BmcAI | AGTACT | 1 cut(s) | 1179 |
| Bme1390I | CCNGG | 1 cut(s) | 1475 |
| Bme18I | GGWCC | 1 cut(s) | 2503 |
| BmeT110I | CYCGRG | 1 cut(s) | 1637 |
| BmgT120I | GGNCC | 2 cut(s) | 2503, 2666 |
| BmiI | GGNNCC | 2 cut(s) | 2504, 2668 |
| BmrFI | CCNGG | 1 cut(s) | 1475 |
| BmrI | ACTGGG | 4 cut(s) | 1190, 1247, 2106, 2664 |
| BmsI | GCATC | 6 cut(s) | 263, 312, 1422, 2196, 2587, 2612 |
| BmuI | ACTGGG | 4 cut(s) | 1190, 1247, 2106, 2664 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2295 |
| BpiI | GAAGAC | 5 cut(s) | 642, 1429, 1530, 1742, 2207 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1576, 1608 |
| BpmI | CTGGAG | 2 cut(s) | 174, 1052 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2568 |
| BpuEI | CTTGAG | 1 cut(s) | 577 |
| BpuMI | CCSGG | 1 cut(s) | 1475 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaHI | GRCGYC | 1 cut(s) | 639 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 303, 333, 2634, 2664 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 864, 1453, 2440, 2573 |
| Bse1I | ACTGG | 5 cut(s) | 1185, 1242, 2076, 2112, 2670 |
| Bse3DI | GCAATG | 3 cut(s) | 1296, 1363, 2033 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseGI | GGATG | 5 cut(s) | 160, 280, 1437, 2129, 2626 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 864, 1453, 2440, 2573 |
| BseMI | GCAATG | 3 cut(s) | 1296, 1363, 2033 |
| BseMII | CTCAG | 3 cut(s) | 1220, 1574, 2195 |
| BseNI | ACTGG | 5 cut(s) | 1185, 1242, 2076, 2112, 2670 |
| BseRI | GAGGAG | 3 cut(s) | 751, 2546, 2639 |
| BseSI | GKGCMC | 1 cut(s) | 1896 |
| BseXI | GCAGC | 3 cut(s) | 190, 613, 2612 |
| BseYI | CCCAGC | 1 cut(s) | 1834 |
| BsgI | GTGCAG | 1 cut(s) | 1522 |
| BshFI | GGCC | 4 cut(s) | 1101, 1158, 2193, 2667 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1637 |
| BsiSI | CCGG | 1 cut(s) | 1474 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 864, 1453, 2440, 2573 |
| BsmAI | GTCTC | 1 cut(s) | 436 |
| BsmI | GAATGC | 3 cut(s) | 302, 1088, 2056 |
| BsnI | GGCC | 4 cut(s) | 1101, 1158, 2193, 2667 |
| BsoBI | CYCGRG | 1 cut(s) | 1637 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1896 |
| BspACI | CCGC | 6 cut(s) | 643, 669, 698, 1471, 2086, 2483 |
| BspANI | GGCC | 4 cut(s) | 1101, 1158, 2193, 2667 |
| BspCNI | CTCAG | 3 cut(s) | 1221, 1575, 2194 |
| BspHI | TCATGA | 1 cut(s) | 844 |
| BspLI | GGNNCC | 2 cut(s) | 2504, 2668 |
| BspMI | ACCTGC | 2 cut(s) | 1488, 1830 |
| BspPI | GGATC | 6 cut(s) | 152, 338, 1605, 2082, 2328, 2343 |
| BsrBI | CCGCTC | 1 cut(s) | 698 |
| BsrDI | GCAATG | 3 cut(s) | 1296, 1363, 2033 |
| BsrI | ACTGG | 5 cut(s) | 1185, 1242, 2076, 2112, 2670 |
| BssNI | GRCGYC | 1 cut(s) | 639 |
| Bst4CI | ACNGT | 4 cut(s) | 48, 1352, 1411, 1956 |
| Bst6I | CTCTTC | 3 cut(s) | 1195, 1237, 2435 |
| BstACI | GRCGYC | 1 cut(s) | 639 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1441 |
| BstC8I | GCNNGC | 3 cut(s) | 2195, 2237, 2665 |
| BstDEI | CTNAG | 8 cut(s) | 1208, 1229, 1427, 1583, 2078, 2181, 2568, 2682 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2438, 2571 |
| BstF5I | GGATG | 5 cut(s) | 160, 280, 1437, 2129, 2626 |
| BstHHI | GCGC | 1 cut(s) | 2663 |
| BstMAI | GTCTC | 1 cut(s) | 436 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 200, 1441, 1831, 2621 |
| BstNSI | RCATGY | 3 cut(s) | 449, 1305, 2449 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2295 |
| BstSCI | CCNGG | 1 cut(s) | 1473 |
| BstSLI | GKGCMC | 1 cut(s) | 1896 |
| BstV1I | GCAGC | 3 cut(s) | 190, 613, 2612 |
| BstV2I | GAAGAC | 5 cut(s) | 642, 1429, 1530, 1742, 2207 |
| BstX2I | RGATCY | 4 cut(s) | 1204, 1397, 1597, 2074 |
| BstYI | RGATCY | 4 cut(s) | 1204, 1397, 1597, 2074 |
| BsuI | GTATCC | 1 cut(s) | 79 |
| BsuRI | GGCC | 4 cut(s) | 1101, 1158, 2193, 2667 |
| BtgZI | GCGATG | 1 cut(s) | 429 |
| BtsCI | GGATG | 5 cut(s) | 160, 280, 1437, 2129, 2626 |
| BtsI | GCAGTG | 2 cut(s) | 117, 1765 |
| BtsIMutI | CAGTG | 5 cut(s) | 53, 117, 1765, 2119, 2677 |
| BveI | ACCTGC | 2 cut(s) | 1488, 1830 |
| Cac8I | GCNNGC | 3 cut(s) | 2195, 2237, 2665 |
| CciI | TCATGA | 1 cut(s) | 844 |
| CfoI | GCGC | 1 cut(s) | 2663 |
| Cfr13I | GGNCC | 2 cut(s) | 2503, 2666 |
| Csp6I | GTAC | 3 cut(s) | 356, 1178, 2437 |
| CviQI | GTAC | 3 cut(s) | 356, 1178, 2437 |
| DdeI | CTNAG | 8 cut(s) | 1208, 1229, 1427, 1583, 2078, 2181, 2568, 2682 |
| DraI | TTTAAA | 4 cut(s) | 930, 1621, 1948, 2425 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2010, 2211 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2010, 2211 |
| EaeI | YGGCCR | 1 cut(s) | 2191 |
| Eam1104I | CTCTTC | 3 cut(s) | 1195, 1237, 2435 |
| EarI | CTCTTC | 3 cut(s) | 1195, 1237, 2435 |
| EciI | GGCGGA | 1 cut(s) | 1460 |
| Eco147I | AGGCCT | 1 cut(s) | 1158 |
| Eco47I | GGWCC | 1 cut(s) | 2503 |
| Eco57I | CTGAAG | 3 cut(s) | 1128, 2201, 2321 |
| Eco88I | CYCGRG | 1 cut(s) | 1637 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2438, 2571 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2666 |
| EcoRI | GAATTC | 3 cut(s) | 288, 481, 2142 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 302, 2451 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1104, 1136, 1696, 1728 |
| FauI | CCCGC | 1 cut(s) | 662 |
| FbaI | TGATCA | 1 cut(s) | 2365 |
| FblI | GTMKAC | 2 cut(s) | 778, 828 |
| Fnu4HI | GCNGC | 3 cut(s) | 204, 602, 2601 |
| FokI | GGATG | 5 cut(s) | 167, 287, 1444, 2136, 2613 |
| Fsp4HI | GCNGC | 3 cut(s) | 204, 602, 2601 |
| FspBI | CTAG | 6 cut(s) | 578, 990, 1292, 2049, 2202, 2607 |
| GlaI | GCGC | 1 cut(s) | 2662 |
| GluI | GCNGC | 3 cut(s) | 204, 602, 2601 |
| GsaI | CCCAGC | 1 cut(s) | 1838 |
| GsuI | CTGGAG | 2 cut(s) | 174, 1052 |
| HaeIII | GGCC | 4 cut(s) | 1101, 1158, 2193, 2667 |
| HapII | CCGG | 1 cut(s) | 1474 |
| HhaI | GCGC | 1 cut(s) | 2663 |
| Hin1I | GRCGYC | 1 cut(s) | 639 |
| Hin6I | GCGC | 1 cut(s) | 2661 |
| HinP1I | GCGC | 1 cut(s) | 2661 |
| HincII | GTYRAC | 3 cut(s) | 261, 829, 1681 |
| HindII | GTYRAC | 3 cut(s) | 261, 829, 1681 |
| HindIII | AAGCTT | 3 cut(s) | 1811, 1859, 2237 |
| HinfI | GANTC | 7 cut(s) | 215, 500, 1061, 1478, 1585, 2461, 2479 |
| HpaII | CCGG | 1 cut(s) | 1474 |
| HphI | GGTGA | 1 cut(s) | 2300 |
| Hpy166II | GTNNAC | 6 cut(s) | 261, 779, 829, 913, 1226, 1681 |
| Hpy188I | TCNGA | 8 cut(s) | 352, 515, 766, 838, 1584, 2184, 2244, 2301 |
| Hpy8I | GTNNAC | 6 cut(s) | 261, 779, 829, 913, 1226, 1681 |
| HpyAV | CCTTC | 9 cut(s) | 45, 429, 749, 842, 851, 1169, 1452, 1649, 2548 |
| HpyCH4III | ACNGT | 4 cut(s) | 48, 1352, 1411, 1956 |
| HpyCH4IV | ACGT | 2 cut(s) | 639, 2370 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 200, 1441, 1831, 2621 |
| HpyF3I | CTNAG | 8 cut(s) | 1208, 1229, 1427, 1583, 2078, 2181, 2568, 2682 |
| HpySE526I | ACGT | 2 cut(s) | 639, 2370 |
| Hsp92I | GRCGYC | 1 cut(s) | 639 |
| HspAI | GCGC | 1 cut(s) | 2661 |
| Ksp22I | TGATCA | 1 cut(s) | 2365 |
| LmnI | GCTCC | 4 cut(s) | 851, 1449, 2202, 2533 |
| Lsp1109I | GCAGC | 3 cut(s) | 190, 613, 2612 |
| LweI | GCATC | 6 cut(s) | 263, 312, 1422, 2196, 2587, 2612 |
| MaeI | CTAG | 6 cut(s) | 578, 990, 1292, 2049, 2202, 2607 |
| MaeII | ACGT | 2 cut(s) | 639, 2370 |
| MaeIII | GTNAC | 8 cut(s) | 878, 1250, 1333, 1586, 1956, 2012, 2081, 2288 |
| MbiI | CCGCTC | 1 cut(s) | 698 |
| MfeI | CAATTG | 2 cut(s) | 207, 1689 |
| MflI | RGATCY | 4 cut(s) | 1204, 1397, 1597, 2074 |
| MhlI | GDGCHC | 1 cut(s) | 1896 |
| MlyI | GAGTC | 1 cut(s) | 1594 |
| MmeI | TCCRAC | 2 cut(s) | 2202, 2313 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 302, 2451 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1932, 2214 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2271, 2386, 2589 |
| MspA1I | CMGCKG | 1 cut(s) | 1080 |
| MspI | CCGG | 1 cut(s) | 1474 |
| MspR9I | CCNGG | 1 cut(s) | 1475 |
| MunI | CAATTG | 2 cut(s) | 207, 1689 |
| Mva1269I | GAATGC | 3 cut(s) | 302, 1088, 2056 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 200, 1441, 1831, 2621 |
| NciI | CCSGG | 1 cut(s) | 1475 |
| NlaIV | GGNNCC | 2 cut(s) | 2504, 2668 |
| NmeAIII | GCCGAG | 1 cut(s) | 1518 |
| NmuCI | GTSAC | 5 cut(s) | 878, 1586, 2012, 2081, 2288 |
| NsiI | ATGCAT | 3 cut(s) | 256, 302, 2451 |
| NspI | RCATGY | 3 cut(s) | 449, 1305, 2449 |
| OliI | CACNNNNGTG | 1 cut(s) | 2386 |
| PaeR7I | CTCGAG | 1 cut(s) | 1637 |
| PagI | TCATGA | 1 cut(s) | 844 |
| PaqCI | CACCTGC | 1 cut(s) | 1488 |
| PceI | AGGCCT | 1 cut(s) | 1158 |
| PctI | GAATGC | 3 cut(s) | 302, 1088, 2056 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1932, 2214 |
| PfeI | GAWTC | 6 cut(s) | 215, 500, 1061, 1478, 2461, 2479 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1453 |
| PkrI | GCNGC | 3 cut(s) | 205, 603, 2602 |
| PleI | GAGTC | 1 cut(s) | 1593 |
| PpsI | GAGTC | 1 cut(s) | 1593 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2295 |
| PsiI | TTATAA | 3 cut(s) | 143, 863, 1142 |
| PspFI | CCCAGC | 1 cut(s) | 1834 |
| PspN4I | GGNNCC | 2 cut(s) | 2504, 2668 |
| PspPI | GGNCC | 2 cut(s) | 2503, 2666 |
| PsuI | RGATCY | 4 cut(s) | 1204, 1397, 1597, 2074 |
| PvuII | CAGCTG | 1 cut(s) | 1080 |
| RsaI | GTAC | 3 cut(s) | 357, 1179, 2438 |
| RsaNI | GTAC | 3 cut(s) | 356, 1178, 2437 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2271, 2386, 2589 |
| SalI | GTCGAC | 1 cut(s) | 827 |
| SatI | GCNGC | 3 cut(s) | 204, 602, 2601 |
| Sau96I | GGNCC | 2 cut(s) | 2503, 2666 |
| ScaI | AGTACT | 1 cut(s) | 1179 |
| SchI | GAGTC | 1 cut(s) | 1594 |
| ScrFI | CCNGG | 1 cut(s) | 1475 |
| SduI | GDGCHC | 1 cut(s) | 1896 |
| SfaNI | GCATC | 6 cut(s) | 263, 312, 1422, 2196, 2587, 2612 |
| Sfr274I | CTCGAG | 1 cut(s) | 1637 |
| SinI | GGWCC | 1 cut(s) | 2503 |
| SlaI | CTCGAG | 1 cut(s) | 1637 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2271, 2386, 2589 |
| SmlI | CTYRAG | 2 cut(s) | 592, 1637 |
| SmoI | CTYRAG | 2 cut(s) | 592, 1637 |
| SseBI | AGGCCT | 1 cut(s) | 1158 |
| SsiI | CCGC | 6 cut(s) | 643, 669, 698, 1471, 2086, 2483 |
| SspI | AATATT | 2 cut(s) | 935, 1287 |
| SspMI | CTAG | 6 cut(s) | 578, 990, 1292, 2049, 2202, 2607 |
| StuI | AGGCCT | 1 cut(s) | 1158 |
| StyD4I | CCNGG | 1 cut(s) | 1473 |
| TaaI | ACNGT | 4 cut(s) | 48, 1352, 1411, 1956 |
| TaiI | ACGT | 2 cut(s) | 642, 2373 |
| TaqI | TCGA | 6 cut(s) | 91, 828, 1266, 1330, 1638, 2323 |
| TatI | WGTACW | 1 cut(s) | 1177 |
| TfiI | GAWTC | 6 cut(s) | 215, 500, 1061, 1478, 2461, 2479 |
| TscAI | CASTG | 5 cut(s) | 53, 124, 1765, 2119, 2677 |
| TseFI | GTSAC | 5 cut(s) | 878, 1586, 2012, 2081, 2288 |
| TseI | GCWGC | 3 cut(s) | 203, 601, 2600 |
| Tsp45I | GTSAC | 5 cut(s) | 878, 1586, 2012, 2081, 2288 |
| TspGWI | ACGGA | 2 cut(s) | 1329, 2495 |
| TspRI | CASTG | 5 cut(s) | 53, 124, 1765, 2119, 2677 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1453 |
| VpaK11BI | GGWCC | 1 cut(s) | 2503 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2438, 2571 |
| XapI | RAATTY | 6 cut(s) | 288, 481, 722, 1046, 1260, 2142 |
| XbaI | TCTAGA | 1 cut(s) | 989 |
| XceI | RCATGY | 3 cut(s) | 449, 1305, 2449 |
| XhoI | CTCGAG | 1 cut(s) | 1637 |
| XmiI | GTMKAC | 2 cut(s) | 778, 828 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1088, 1116, 1932, 2214 |
| XspI | CTAG | 6 cut(s) | 578, 990, 1292, 2049, 2202, 2607 |
| ZraI | GACGTC | 1 cut(s) | 640 |
| ZrmI | AGTACT | 1 cut(s) | 1179 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 302, 2451 |