TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 20 - 158 | 1.4e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 551 |
| AccIII | TCCGGA | 1 cut(s) | 351 |
| AciI | CCGC | 2 cut(s) | 31, 588 |
| AclWI | GGATC | 1 cut(s) | 221 |
| AcsI | RAATTY | 2 cut(s) | 72, 243 |
| AcuI | CTGAAG | 1 cut(s) | 231 |
| AfaI | GTAC | 2 cut(s) | 183, 458 |
| AgsI | TTSAA | 2 cut(s) | 40, 88 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 196 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 2 cut(s) | 404, 478 |
| AluI | AGCT | 2 cut(s) | 404, 478 |
| Alw21I | GWGCWC | 2 cut(s) | 175, 465 |
| Alw26I | GTCTC | 3 cut(s) | 48, 99, 298 |
| AlwI | GGATC | 1 cut(s) | 221 |
| Ama87I | CYCGRG | 2 cut(s) | 47, 399 |
| Aor13HI | TCCGGA | 1 cut(s) | 351 |
| ApeKI | GCWGC | 4 cut(s) | 507, 510, 578, 623 |
| ApoI | RAATTY | 2 cut(s) | 72, 243 |
| AspS9I | GGNCC | 1 cut(s) | 445 |
| AsuC2I | CCSGG | 1 cut(s) | 449 |
| AsuHPI | GGTGA | 2 cut(s) | 311, 442 |
| AsuII | TTCGAA | 1 cut(s) | 390 |
| AvaI | CYCGRG | 2 cut(s) | 47, 399 |
| AvaII | GGWCC | 1 cut(s) | 445 |
| BaeGI | GKGCMC | 1 cut(s) | 454 |
| BanI | GGYRCC | 1 cut(s) | 551 |
| BbsI | GAAGAC | 2 cut(s) | 219, 379 |
| Bbv12I | GWGCWC | 2 cut(s) | 175, 465 |
| BbvI | GCAGC | 3 cut(s) | 519, 522, 590 |
| BccI | CCATC | 1 cut(s) | 33 |
| BceAI | ACGGC | 1 cut(s) | 188 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BciVI | GTATCC | 1 cut(s) | 404 |
| BclI | TGATCA | 1 cut(s) | 480 |
| BcnI | CCSGG | 1 cut(s) | 449 |
| BcoDI | GTCTC | 3 cut(s) | 48, 99, 298 |
| BfmI | CTRYAG | 3 cut(s) | 238, 405, 621 |
| BfuI | GTATCC | 1 cut(s) | 404 |
| BisI | GCNGC | 5 cut(s) | 31, 508, 511, 579, 624 |
| BlpI | GCTNAGC | 1 cut(s) | 341 |
| BlsI | GCNGC | 5 cut(s) | 32, 509, 512, 580, 625 |
| Bme1390I | CCNGG | 2 cut(s) | 63, 449 |
| Bme18I | GGWCC | 1 cut(s) | 445 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 196 |
| BmeT110I | CYCGRG | 2 cut(s) | 47, 399 |
| BmgT120I | GGNCC | 1 cut(s) | 445 |
| BmiI | GGNNCC | 2 cut(s) | 446, 553 |
| BmrFI | CCNGG | 2 cut(s) | 63, 449 |
| BpiI | GAAGAC | 2 cut(s) | 219, 379 |
| BpmI | CTGGAG | 1 cut(s) | 392 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 341 |
| Bpu14I | TTCGAA | 1 cut(s) | 390 |
| BpuEI | CTTGAG | 1 cut(s) | 171 |
| BpuMI | CCSGG | 1 cut(s) | 449 |
| BsaJI | CCNNGG | 1 cut(s) | 555 |
| BsaWI | WCCGGW | 1 cut(s) | 351 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 96, 126 |
| BseAI | TCCGGA | 1 cut(s) | 351 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 555 |
| BseGI | GGATG | 2 cut(s) | 139, 544 |
| BseMII | CTCAG | 2 cut(s) | 108, 351 |
| BseRI | GAGGAG | 1 cut(s) | 542 |
| BseSI | GKGCMC | 1 cut(s) | 454 |
| BseXI | GCAGC | 3 cut(s) | 519, 522, 590 |
| BshNI | GGYRCC | 1 cut(s) | 551 |
| BsiHKAI | GWGCWC | 2 cut(s) | 175, 465 |
| BsiHKCI | CYCGRG | 2 cut(s) | 47, 399 |
| BsiSI | CCGG | 2 cut(s) | 352, 448 |
| BsmAI | GTCTC | 3 cut(s) | 48, 99, 298 |
| BsoBI | CYCGRG | 2 cut(s) | 47, 399 |
| Bsp119I | TTCGAA | 1 cut(s) | 390 |
| Bsp1286I | GDGCHC | 3 cut(s) | 175, 454, 465 |
| Bsp13I | TCCGGA | 1 cut(s) | 351 |
| Bsp143I | GATC | 3 cut(s) | 226, 316, 480 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 341 |
| Bsp19I | CCATGG | 1 cut(s) | 555 |
| BspACI | CCGC | 2 cut(s) | 31, 588 |
| BspCNI | CTCAG | 2 cut(s) | 109, 352 |
| BspEI | TCCGGA | 1 cut(s) | 351 |
| BspLI | GGNNCC | 2 cut(s) | 446, 553 |
| BspMAI | CTGCAG | 1 cut(s) | 625 |
| BspPI | GGATC | 1 cut(s) | 221 |
| BspQI | GCTCTTC | 1 cut(s) | 468 |
| BspT104I | TTCGAA | 1 cut(s) | 390 |
| BspT107I | GGYRCC | 1 cut(s) | 551 |
| BssECI | CCNNGG | 1 cut(s) | 555 |
| BssMI | GATC | 3 cut(s) | 226, 316, 480 |
| BssT1I | CCWWGG | 1 cut(s) | 555 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 2 cut(s) | 368, 456 |
| Bst6I | CTCTTC | 1 cut(s) | 468 |
| BstBI | TTCGAA | 1 cut(s) | 390 |
| BstDEI | CTNAG | 3 cut(s) | 117, 341, 360 |
| BstDSI | CCRYGG | 1 cut(s) | 555 |
| BstF5I | GGATG | 2 cut(s) | 139, 544 |
| BstKTI | GATC | 3 cut(s) | 229, 319, 483 |
| BstMAI | GTCTC | 3 cut(s) | 48, 99, 298 |
| BstMBI | GATC | 3 cut(s) | 226, 316, 480 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 170 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstSCI | CCNGG | 2 cut(s) | 61, 447 |
| BstSFI | CTRYAG | 3 cut(s) | 238, 405, 621 |
| BstSLI | GKGCMC | 1 cut(s) | 454 |
| BstV1I | GCAGC | 3 cut(s) | 519, 522, 590 |
| BstV2I | GAAGAC | 2 cut(s) | 219, 379 |
| BstX2I | RGATCY | 1 cut(s) | 226 |
| BstYI | RGATCY | 1 cut(s) | 226 |
| BsuI | GTATCC | 1 cut(s) | 404 |
| BtgI | CCRYGG | 1 cut(s) | 555 |
| BtgZI | GCGATG | 1 cut(s) | 11 |
| BtsCI | GGATG | 2 cut(s) | 139, 544 |
| BtsIMutI | CAGTG | 1 cut(s) | 452 |
| Cfr13I | GGNCC | 1 cut(s) | 445 |
| Csp6I | GTAC | 2 cut(s) | 182, 457 |
| CviAII | CATG | 3 cut(s) | 281, 424, 556 |
| CviJI | RGCY | 4 cut(s) | 345, 404, 478, 600 |
| CviKI_1 | RGCY | 4 cut(s) | 345, 404, 478, 600 |
| CviQI | GTAC | 2 cut(s) | 182, 457 |
| DdeI | CTNAG | 3 cut(s) | 117, 341, 360 |
| DpnI | GATC | 3 cut(s) | 228, 318, 482 |
| DpnII | GATC | 3 cut(s) | 226, 316, 480 |
| DriI | GACNNNNNGTC | 1 cut(s) | 196 |
| Eam1104I | CTCTTC | 1 cut(s) | 468 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 196 |
| EarI | CTCTTC | 1 cut(s) | 468 |
| Eco130I | CCWWGG | 1 cut(s) | 555 |
| Eco47I | GGWCC | 1 cut(s) | 445 |
| Eco57I | CTGAAG | 1 cut(s) | 231 |
| Eco88I | CYCGRG | 2 cut(s) | 47, 399 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| EcoT14I | CCWWGG | 1 cut(s) | 555 |
| EcoT22I | ATGCAT | 1 cut(s) | 425 |
| ErhI | CCWWGG | 1 cut(s) | 555 |
| FaeI | CATG | 3 cut(s) | 284, 427, 559 |
| FaiI | YATR | 8 cut(s) | 12, 14, 267, 282, 421, 425, 536, 557 |
| FatI | CATG | 3 cut(s) | 280, 423, 555 |
| FauNDI | CATATG | 1 cut(s) | 12 |
| FbaI | TGATCA | 1 cut(s) | 480 |
| Fnu4HI | GCNGC | 5 cut(s) | 31, 508, 511, 579, 624 |
| FokI | GGATG | 2 cut(s) | 146, 551 |
| Fsp4HI | GCNGC | 5 cut(s) | 31, 508, 511, 579, 624 |
| GluI | GCNGC | 5 cut(s) | 31, 508, 511, 579, 624 |
| GsuI | CTGGAG | 1 cut(s) | 392 |
| HapII | CCGG | 2 cut(s) | 352, 448 |
| Hin1II | CATG | 3 cut(s) | 284, 427, 559 |
| HpaII | CCGG | 2 cut(s) | 352, 448 |
| HphI | GGTGA | 2 cut(s) | 311, 442 |
| Hpy166II | GTNNAC | 1 cut(s) | 278 |
| Hpy188I | TCNGA | 3 cut(s) | 133, 316, 604 |
| Hpy188III | TCNNGA | 7 cut(s) | 47, 77, 188, 209, 230, 352, 371 |
| Hpy8I | GTNNAC | 1 cut(s) | 278 |
| Hpy99I | CGWCG | 1 cut(s) | 611 |
| HpyAV | CCTTC | 2 cut(s) | 421, 542 |
| HpyCH4III | ACNGT | 2 cut(s) | 368, 456 |
| HpyCH4IV | ACGT | 2 cut(s) | 127, 417 |
| HpyCH4V | TGCA | 4 cut(s) | 16, 153, 423, 623 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 170 |
| HpyF3I | CTNAG | 3 cut(s) | 117, 341, 360 |
| HpySE526I | ACGT | 2 cut(s) | 127, 417 |
| Hsp92II | CATG | 3 cut(s) | 284, 427, 559 |
| Kpn2I | TCCGGA | 1 cut(s) | 351 |
| Ksp22I | TGATCA | 1 cut(s) | 480 |
| Kzo9I | GATC | 3 cut(s) | 226, 316, 480 |
| LguI | GCTCTTC | 1 cut(s) | 468 |
| Lsp1109I | GCAGC | 3 cut(s) | 519, 522, 590 |
| MaeII | ACGT | 2 cut(s) | 127, 417 |
| MaeIII | GTNAC | 2 cut(s) | 112, 123 |
| MalI | GATC | 3 cut(s) | 228, 318, 482 |
| MboI | GATC | 3 cut(s) | 226, 316, 480 |
| MboII | GAAGA | 4 cut(s) | 224, 379, 445, 485 |
| MflI | RGATCY | 1 cut(s) | 226 |
| MhlI | GDGCHC | 3 cut(s) | 175, 454, 465 |
| MluCI | AATT | 6 cut(s) | 57, 72, 177, 243, 305, 379 |
| MmeI | TCCRAC | 1 cut(s) | 236 |
| MnlI | CCTC | 5 cut(s) | 195, 367, 520, 523, 568 |
| Mph1103I | ATGCAT | 1 cut(s) | 425 |
| MroI | TCCGGA | 1 cut(s) | 351 |
| MseI | TTAA | 2 cut(s) | 378, 561 |
| MslI | CAYNNNNRTG | 1 cut(s) | 428 |
| MspI | CCGG | 2 cut(s) | 352, 448 |
| MspR9I | CCNGG | 2 cut(s) | 63, 449 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 170 |
| NciI | CCSGG | 1 cut(s) | 449 |
| NcoI | CCATGG | 1 cut(s) | 555 |
| NdeI | CATATG | 1 cut(s) | 12 |
| NdeII | GATC | 3 cut(s) | 226, 316, 480 |
| NlaIII | CATG | 3 cut(s) | 284, 427, 559 |
| NlaIV | GGNNCC | 2 cut(s) | 446, 553 |
| NsiI | ATGCAT | 1 cut(s) | 425 |
| NspV | TTCGAA | 1 cut(s) | 390 |
| PaeR7I | CTCGAG | 2 cut(s) | 47, 399 |
| PciSI | GCTCTTC | 1 cut(s) | 468 |
| PfoI | TCCNGGA | 1 cut(s) | 61 |
| PkrI | GCNGC | 5 cut(s) | 32, 509, 512, 580, 625 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 2 cut(s) | 446, 553 |
| PspPI | GGNCC | 1 cut(s) | 445 |
| PspXI | VCTCGAGB | 1 cut(s) | 399 |
| PstI | CTGCAG | 1 cut(s) | 625 |
| PsuI | RGATCY | 1 cut(s) | 226 |
| RsaI | GTAC | 2 cut(s) | 183, 458 |
| RsaNI | GTAC | 2 cut(s) | 182, 457 |
| RseI | CAYNNNNRTG | 1 cut(s) | 428 |
| SapI | GCTCTTC | 1 cut(s) | 468 |
| SaqAI | TTAA | 2 cut(s) | 378, 561 |
| SatI | GCNGC | 5 cut(s) | 31, 508, 511, 579, 624 |
| Sau3AI | GATC | 3 cut(s) | 226, 316, 480 |
| Sau96I | GGNCC | 1 cut(s) | 445 |
| ScrFI | CCNGG | 2 cut(s) | 63, 449 |
| SduI | GDGCHC | 3 cut(s) | 175, 454, 465 |
| SfcI | CTRYAG | 3 cut(s) | 238, 405, 621 |
| Sfr274I | CTCGAG | 2 cut(s) | 47, 399 |
| SfuI | TTCGAA | 1 cut(s) | 390 |
| SinI | GGWCC | 1 cut(s) | 445 |
| SlaI | CTCGAG | 2 cut(s) | 47, 399 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 428 |
| SmlI | CTYRAG | 3 cut(s) | 47, 186, 399 |
| SmoI | CTYRAG | 3 cut(s) | 47, 186, 399 |
| Sse9I | AATT | 6 cut(s) | 57, 72, 177, 243, 305, 379 |
| SsiI | CCGC | 2 cut(s) | 31, 588 |
| SspI | AATATT | 1 cut(s) | 614 |
| StyD4I | CCNGG | 2 cut(s) | 61, 447 |
| StyI | CCWWGG | 1 cut(s) | 555 |
| TaaI | ACNGT | 2 cut(s) | 368, 456 |
| TaiI | ACGT | 2 cut(s) | 130, 420 |
| TaqI | TCGA | 3 cut(s) | 48, 390, 400 |
| TasI | AATT | 6 cut(s) | 57, 72, 177, 243, 305, 379 |
| TauI | GCSGC | 1 cut(s) | 33 |
| Tru1I | TTAA | 2 cut(s) | 378, 561 |
| Tru9I | TTAA | 2 cut(s) | 378, 561 |
| TscAI | CASTG | 1 cut(s) | 459 |
| TseI | GCWGC | 4 cut(s) | 507, 510, 578, 623 |
| TspDTI | ATGAA | 4 cut(s) | 150, 440, 506, 555 |
| TspGWI | ACGGA | 2 cut(s) | 186, 485 |
| TspRI | CASTG | 1 cut(s) | 459 |
| VpaK11BI | GGWCC | 1 cut(s) | 445 |
| XapI | RAATTY | 2 cut(s) | 72, 243 |
| XhoI | CTCGAG | 2 cut(s) | 47, 399 |
| Zsp2I | ATGCAT | 1 cut(s) | 425 |