TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 224 - 333 | 4.4e-17 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1302, 1686 |
| AccB1I | GGYRCC | 1 cut(s) | 414 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 712 |
| AccI | GTMKAC | 1 cut(s) | 462 |
| AciI | CCGC | 2 cut(s) | 418, 818 |
| AclI | AACGTT | 1 cut(s) | 622 |
| AclWI | GGATC | 6 cut(s) | 264, 734, 747, 1094, 1105, 1349 |
| AcoI | YGGCCR | 1 cut(s) | 376 |
| AcsI | RAATTY | 2 cut(s) | 662, 684 |
| AcuI | CTGAAG | 4 cut(s) | 300, 410, 921, 977 |
| AfaI | GTAC | 2 cut(s) | 698, 1547 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 712, 1365 |
| AflII | CTTAAG | 1 cut(s) | 611 |
| AflIII | ACRYGT | 2 cut(s) | 1272, 1466 |
| AjnI | CCWGG | 3 cut(s) | 673, 742, 1243 |
| AluBI | AGCT | 9 cut(s) | 43, 194, 424, 573, 736, 862, 1291, 1488, 1730 |
| AluI | AGCT | 9 cut(s) | 43, 194, 424, 573, 736, 862, 1291, 1488, 1730 |
| Alw26I | GTCTC | 1 cut(s) | 1342 |
| AlwI | GGATC | 6 cut(s) | 264, 734, 747, 1094, 1105, 1349 |
| AoxI | GGCC | 3 cut(s) | 376, 1425, 1737 |
| ApeKI | GCWGC | 5 cut(s) | 808, 1184, 1238, 1314, 1488 |
| ApoI | RAATTY | 2 cut(s) | 662, 684 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 399 |
| AspS9I | GGNCC | 2 cut(s) | 1425, 1700 |
| AsuHPI | GGTGA | 5 cut(s) | 132, 695, 766, 811, 961 |
| AvaII | GGWCC | 1 cut(s) | 1700 |
| BaeGI | GKGCMC | 1 cut(s) | 78 |
| BamHI | GGATCC | 1 cut(s) | 739 |
| BanI | GGYRCC | 1 cut(s) | 414 |
| BanII | GRGCYC | 2 cut(s) | 883, 1408 |
| BbsI | GAAGAC | 2 cut(s) | 20, 1751 |
| BbvI | GCAGC | 5 cut(s) | 795, 1171, 1225, 1301, 1475 |
| BccI | CCATC | 4 cut(s) | 41, 864, 1474, 1716 |
| BceAI | ACGGC | 1 cut(s) | 1417 |
| BciT130I | CCWGG | 3 cut(s) | 675, 744, 1245 |
| BclI | TGATCA | 1 cut(s) | 1174 |
| BcoDI | GTCTC | 1 cut(s) | 1342 |
| BfaI | CTAG | 4 cut(s) | 387, 731, 1071, 1617 |
| BfmI | CTRYAG | 1 cut(s) | 1489 |
| BfrI | CTTAAG | 1 cut(s) | 611 |
| BisI | GCNGC | 6 cut(s) | 418, 809, 1185, 1239, 1315, 1489 |
| BlsI | GCNGC | 6 cut(s) | 419, 810, 1186, 1240, 1316, 1490 |
| Bme1390I | CCNGG | 3 cut(s) | 675, 744, 1245 |
| Bme18I | GGWCC | 1 cut(s) | 1700 |
| BmgT120I | GGNCC | 2 cut(s) | 1425, 1700 |
| BmiI | GGNNCC | 5 cut(s) | 416, 741, 880, 1426, 1668 |
| BmrFI | CCNGG | 3 cut(s) | 675, 744, 1245 |
| BmrI | ACTGGG | 1 cut(s) | 288 |
| BmsI | GCATC | 6 cut(s) | 296, 381, 1026, 1076, 1110, 1601 |
| BmuI | ACTGGG | 1 cut(s) | 288 |
| BpiI | GAAGAC | 2 cut(s) | 20, 1751 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1390, 1422 |
| BpmI | CTGGAG | 1 cut(s) | 386 |
| BsaAI | YACGTR | 1 cut(s) | 1273 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1085 |
| BsaJI | CCNNGG | 2 cut(s) | 492, 674 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 712, 1365 |
| Bse1I | ACTGG | 5 cut(s) | 258, 294, 369, 1102, 1549 |
| Bse3DI | GCAATG | 2 cut(s) | 593, 1015 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1085 |
| BseBI | CCWGG | 3 cut(s) | 675, 744, 1245 |
| BseDI | CCNNGG | 2 cut(s) | 492, 674 |
| BseGI | GGATG | 6 cut(s) | 131, 311, 949, 1066, 1089, 1101 |
| BseJI | GATNNNNATC | 1 cut(s) | 1085 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 712, 1365 |
| BseMI | GCAATG | 2 cut(s) | 593, 1015 |
| BseMII | CTCAG | 1 cut(s) | 1378 |
| BseNI | ACTGG | 5 cut(s) | 258, 294, 369, 1102, 1549 |
| BseRI | GAGGAG | 1 cut(s) | 1013 |
| BseSI | GKGCMC | 1 cut(s) | 78 |
| BseXI | GCAGC | 5 cut(s) | 795, 1171, 1225, 1301, 1475 |
| BshFI | GGCC | 3 cut(s) | 378, 1427, 1739 |
| BshNI | GGYRCC | 1 cut(s) | 414 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 712, 1365 |
| BsmAI | GTCTC | 1 cut(s) | 1342 |
| BsmI | GAATGC | 1 cut(s) | 238 |
| BsnI | GGCC | 3 cut(s) | 378, 1427, 1739 |
| Bsp1286I | GDGCHC | 3 cut(s) | 78, 883, 1408 |
| Bsp143I | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| BspACI | CCGC | 2 cut(s) | 418, 818 |
| BspANI | GGCC | 3 cut(s) | 378, 1427, 1739 |
| BspCNI | CTCAG | 1 cut(s) | 1377 |
| BspLI | GGNNCC | 5 cut(s) | 416, 741, 880, 1426, 1668 |
| BspMAI | CTGCAG | 1 cut(s) | 1493 |
| BspPI | GGATC | 6 cut(s) | 264, 734, 747, 1094, 1105, 1349 |
| BspT107I | GGYRCC | 1 cut(s) | 414 |
| BspTI | CTTAAG | 1 cut(s) | 611 |
| BsrDI | GCAATG | 2 cut(s) | 593, 1015 |
| BsrI | ACTGG | 5 cut(s) | 258, 294, 369, 1102, 1549 |
| BssECI | CCNNGG | 2 cut(s) | 492, 674 |
| BssMI | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| BssT1I | CCWWGG | 1 cut(s) | 492 |
| Bst2UI | CCWGG | 3 cut(s) | 675, 744, 1245 |
| Bst4CI | ACNGT | 7 cut(s) | 138, 269, 539, 548, 892, 1461, 1693 |
| Bst6I | CTCTTC | 3 cut(s) | 405, 1682, 1770 |
| BstAFI | CTTAAG | 1 cut(s) | 611 |
| BstBAI | YACGTR | 1 cut(s) | 1273 |
| BstC8I | GCNNGC | 2 cut(s) | 422, 1486 |
| BstDEI | CTNAG | 2 cut(s) | 260, 1364 |
| BstF5I | GGATG | 6 cut(s) | 131, 311, 949, 1066, 1089, 1101 |
| BstKTI | GATC | 8 cut(s) | 259, 449, 742, 1089, 1113, 1177, 1357, 1534 |
| BstMAI | GTCTC | 1 cut(s) | 1342 |
| BstMBI | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1014, 1736 |
| BstNI | CCWGG | 3 cut(s) | 675, 744, 1245 |
| BstNSI | RCATGY | 1 cut(s) | 1470 |
| BstSCI | CCNGG | 3 cut(s) | 673, 742, 1243 |
| BstSFI | CTRYAG | 1 cut(s) | 1489 |
| BstSLI | GKGCMC | 1 cut(s) | 78 |
| BstV1I | GCAGC | 5 cut(s) | 795, 1171, 1225, 1301, 1475 |
| BstV2I | GAAGAC | 2 cut(s) | 20, 1751 |
| BstX2I | RGATCY | 2 cut(s) | 256, 739 |
| BstYI | RGATCY | 2 cut(s) | 256, 739 |
| BsuRI | GGCC | 3 cut(s) | 378, 1427, 1739 |
| BtsCI | GGATG | 6 cut(s) | 131, 311, 949, 1066, 1089, 1101 |
| BtsI | GCAGTG | 1 cut(s) | 968 |
| BtsIMutI | CAGTG | 4 cut(s) | 251, 301, 888, 968 |
| Cac8I | GCNNGC | 2 cut(s) | 422, 1486 |
| Cfr13I | GGNCC | 2 cut(s) | 1425, 1700 |
| CseI | GACGC | 1 cut(s) | 473 |
| Csp6I | GTAC | 2 cut(s) | 697, 1546 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 766, 801 |
| CviAII | CATG | 4 cut(s) | 150, 1153, 1467, 1603 |
| CviQI | GTAC | 2 cut(s) | 697, 1546 |
| DdeI | CTNAG | 2 cut(s) | 260, 1364 |
| DpnI | GATC | 8 cut(s) | 258, 448, 741, 1088, 1112, 1176, 1356, 1533 |
| DpnII | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| EaeI | YGGCCR | 1 cut(s) | 376 |
| Eam1104I | CTCTTC | 3 cut(s) | 405, 1682, 1770 |
| EarI | CTCTTC | 3 cut(s) | 405, 1682, 1770 |
| Eco130I | CCWWGG | 1 cut(s) | 492 |
| Eco147I | AGGCCT | 1 cut(s) | 1739 |
| Eco24I | GRGCYC | 2 cut(s) | 883, 1408 |
| Eco47I | GGWCC | 1 cut(s) | 1700 |
| Eco57I | CTGAAG | 4 cut(s) | 300, 410, 921, 977 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1425 |
| EcoRI | GAATTC | 1 cut(s) | 662 |
| EcoRII | CCWGG | 3 cut(s) | 673, 742, 1243 |
| EcoT14I | CCWWGG | 1 cut(s) | 492 |
| EcoT38I | GRGCYC | 2 cut(s) | 883, 1408 |
| ErhI | CCWWGG | 1 cut(s) | 492 |
| FaeI | CATG | 4 cut(s) | 153, 1156, 1470, 1606 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1736, 1768 |
| FatI | CATG | 4 cut(s) | 149, 1152, 1466, 1602 |
| FbaI | TGATCA | 1 cut(s) | 1174 |
| FblI | GTMKAC | 1 cut(s) | 462 |
| Fnu4HI | GCNGC | 6 cut(s) | 418, 809, 1185, 1239, 1315, 1489 |
| FokI | GGATG | 6 cut(s) | 138, 318, 956, 1073, 1076, 1088 |
| FriOI | GRGCYC | 2 cut(s) | 883, 1408 |
| Fsp4HI | GCNGC | 6 cut(s) | 418, 809, 1185, 1239, 1315, 1489 |
| FspBI | CTAG | 4 cut(s) | 387, 731, 1071, 1617 |
| GluI | GCNGC | 6 cut(s) | 418, 809, 1185, 1239, 1315, 1489 |
| GsuI | CTGGAG | 1 cut(s) | 386 |
| HaeIII | GGCC | 3 cut(s) | 378, 1427, 1739 |
| HgaI | GACGC | 1 cut(s) | 473 |
| Hin1II | CATG | 4 cut(s) | 153, 1156, 1470, 1606 |
| HincII | GTYRAC | 1 cut(s) | 544 |
| HindII | GTYRAC | 1 cut(s) | 544 |
| HindIII | AAGCTT | 3 cut(s) | 41, 422, 1289 |
| HpaI | GTTAAC | 1 cut(s) | 544 |
| HphI | GGTGA | 5 cut(s) | 132, 695, 766, 811, 961 |
| Hpy166II | GTNNAC | 5 cut(s) | 463, 544, 753, 1457, 1464 |
| Hpy188I | TCNGA | 9 cut(s) | 280, 429, 451, 1141, 1165, 1392, 1410, 1666, 1713 |
| Hpy188III | TCNNGA | 6 cut(s) | 387, 689, 731, 1093, 1114, 1477 |
| Hpy8I | GTNNAC | 5 cut(s) | 463, 544, 753, 1457, 1464 |
| Hpy99I | CGWCG | 1 cut(s) | 1148 |
| HpyAV | CCTTC | 2 cut(s) | 896, 922 |
| HpyCH4III | ACNGT | 7 cut(s) | 138, 269, 539, 548, 892, 1461, 1693 |
| HpyCH4IV | ACGT | 4 cut(s) | 622, 909, 1272, 1305 |
| HpyCH4V | TGCA | 9 cut(s) | 12, 184, 238, 477, 587, 1491, 1606, 1614, 1648 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1014, 1736 |
| HpyF3I | CTNAG | 2 cut(s) | 260, 1364 |
| HpySE526I | ACGT | 4 cut(s) | 622, 909, 1272, 1305 |
| Hsp92II | CATG | 4 cut(s) | 153, 1156, 1470, 1606 |
| Ksp22I | TGATCA | 1 cut(s) | 1174 |
| KspAI | GTTAAC | 1 cut(s) | 544 |
| Kzo9I | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| LmnI | GCTCC | 4 cut(s) | 878, 1000, 1246, 1479 |
| Lsp1109I | GCAGC | 5 cut(s) | 795, 1171, 1225, 1301, 1475 |
| LweI | GCATC | 6 cut(s) | 296, 381, 1026, 1076, 1110, 1601 |
| MaeI | CTAG | 4 cut(s) | 387, 731, 1071, 1617 |
| MaeII | ACGT | 4 cut(s) | 622, 909, 1272, 1305 |
| MaeIII | GTNAC | 4 cut(s) | 138, 213, 263, 910 |
| MalI | GATC | 8 cut(s) | 258, 448, 741, 1088, 1112, 1176, 1356, 1533 |
| MboI | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| MflI | RGATCY | 2 cut(s) | 256, 739 |
| MhlI | GDGCHC | 3 cut(s) | 78, 883, 1408 |
| MluCI | AATT | 5 cut(s) | 350, 588, 662, 684, 1576 |
| MmeI | TCCRAC | 2 cut(s) | 605, 1191 |
| MroXI | GAANNNNTTC | 1 cut(s) | 399 |
| MseI | TTAA | 4 cut(s) | 245, 543, 612, 837 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1047, 1601 |
| MspCI | CTTAAG | 1 cut(s) | 611 |
| MspR9I | CCNGG | 3 cut(s) | 675, 744, 1245 |
| Mva1269I | GAATGC | 1 cut(s) | 238 |
| MvaI | CCWGG | 3 cut(s) | 675, 744, 1245 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1014, 1736 |
| NdeII | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| NlaIII | CATG | 4 cut(s) | 153, 1156, 1470, 1606 |
| NlaIV | GGNNCC | 5 cut(s) | 416, 741, 880, 1426, 1668 |
| NmuCI | GTSAC | 3 cut(s) | 138, 213, 263 |
| NspI | RCATGY | 1 cut(s) | 1470 |
| PceI | AGGCCT | 1 cut(s) | 1739 |
| PciI | ACATGT | 1 cut(s) | 1466 |
| PctI | GAATGC | 1 cut(s) | 238 |
| PdmI | GAANNNNTTC | 1 cut(s) | 399 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 712 |
| PfoI | TCCNGGA | 1 cut(s) | 1243 |
| PkrI | GCNGC | 6 cut(s) | 419, 810, 1186, 1240, 1316, 1490 |
| Ppu21I | YACGTR | 1 cut(s) | 1273 |
| PscI | ACATGT | 1 cut(s) | 1466 |
| PsiI | TTATAA | 2 cut(s) | 1302, 1686 |
| Psp1406I | AACGTT | 1 cut(s) | 622 |
| Psp6I | CCWGG | 3 cut(s) | 673, 742, 1243 |
| PspGI | CCWGG | 3 cut(s) | 673, 742, 1243 |
| PspN4I | GGNNCC | 5 cut(s) | 416, 741, 880, 1426, 1668 |
| PspPI | GGNCC | 2 cut(s) | 1425, 1700 |
| PstI | CTGCAG | 1 cut(s) | 1493 |
| PsuI | RGATCY | 2 cut(s) | 256, 739 |
| RsaI | GTAC | 2 cut(s) | 698, 1547 |
| RsaNI | GTAC | 2 cut(s) | 697, 1546 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1047, 1601 |
| SaqAI | TTAA | 4 cut(s) | 245, 543, 612, 837 |
| SatI | GCNGC | 6 cut(s) | 418, 809, 1185, 1239, 1315, 1489 |
| Sau3AI | GATC | 8 cut(s) | 256, 446, 739, 1086, 1110, 1174, 1354, 1531 |
| Sau96I | GGNCC | 2 cut(s) | 1425, 1700 |
| ScrFI | CCNGG | 3 cut(s) | 675, 744, 1245 |
| SduI | GDGCHC | 3 cut(s) | 78, 883, 1408 |
| SfaNI | GCATC | 6 cut(s) | 296, 381, 1026, 1076, 1110, 1601 |
| SfcI | CTRYAG | 1 cut(s) | 1489 |
| SinI | GGWCC | 1 cut(s) | 1700 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1047, 1601 |
| SmlI | CTYRAG | 1 cut(s) | 611 |
| SmoI | CTYRAG | 1 cut(s) | 611 |
| Sse9I | AATT | 5 cut(s) | 350, 588, 662, 684, 1576 |
| SseBI | AGGCCT | 1 cut(s) | 1739 |
| SsiI | CCGC | 2 cut(s) | 418, 818 |
| SspMI | CTAG | 4 cut(s) | 387, 731, 1071, 1617 |
| StuI | AGGCCT | 1 cut(s) | 1739 |
| StyD4I | CCNGG | 3 cut(s) | 673, 742, 1243 |
| StyI | CCWWGG | 1 cut(s) | 492 |
| TaaI | ACNGT | 7 cut(s) | 138, 269, 539, 548, 892, 1461, 1693 |
| TaiI | ACGT | 4 cut(s) | 625, 912, 1275, 1308 |
| TaqI | TCGA | 2 cut(s) | 445, 926 |
| TaqII | GACCGA | 1 cut(s) | 77 |
| TasI | AATT | 5 cut(s) | 350, 588, 662, 684, 1576 |
| TauI | GCSGC | 1 cut(s) | 420 |
| Tru1I | TTAA | 4 cut(s) | 245, 543, 612, 837 |
| Tru9I | TTAA | 4 cut(s) | 245, 543, 612, 837 |
| TscAI | CASTG | 4 cut(s) | 258, 301, 895, 968 |
| TseFI | GTSAC | 3 cut(s) | 138, 213, 263 |
| TseI | GCWGC | 5 cut(s) | 808, 1184, 1238, 1314, 1488 |
| Tsp45I | GTSAC | 3 cut(s) | 138, 213, 263 |
| TspGWI | ACGGA | 3 cut(s) | 625, 1533, 1763 |
| TspRI | CASTG | 4 cut(s) | 258, 301, 895, 968 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 712 |
| Vha464I | CTTAAG | 1 cut(s) | 611 |
| VpaK11BI | GGWCC | 1 cut(s) | 1700 |
| XapI | RAATTY | 2 cut(s) | 662, 684 |
| XbaI | TCTAGA | 2 cut(s) | 386, 730 |
| XceI | RCATGY | 1 cut(s) | 1470 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 763, 1556 |
| XmiI | GTMKAC | 1 cut(s) | 462 |
| XmnI | GAANNNNTTC | 1 cut(s) | 399 |
| XspI | CTAG | 4 cut(s) | 387, 731, 1071, 1617 |