Rorug05G0520600

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
70606275 .. 70609729
3455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0520600.1

Sequence Viewer

Length: 2379 bp
ATGGGAGATGCATATCATCCGGTAACTATTGCGCAGTGTATTCAATTGCCTCCCAACGTACATTCGGAGGGAATAAAAGGGAAGAAAGATCGTTGGGGACTGGGGTTTTCCCTTCCGATGCTGGAAATGCAGATGGCCATCATTTTCATCGTCACCCAAGTCCTCCATTTAATTTTGAAGAAGTTTCATATCTCTAAGTTCAACAGCCAGCTTCTTGCGGGTATACTCCTCGGCCACCTTGGCAAAAACCTCAGCCTCCTCGGGACGGATAAGAAGTTGGACGCTCTAACATTTCCTGTAGACAGTCAAGAAGTAATTAGTGTTCTGGGTGAGCTTGGCTTTGGACTCTTTCTGTTCGTCATTGGAGTGAAAATGGAGGTGGAAATGATAAGAAGAATAGGACGTAAAGCGATCCTCACCGGTACTTTATGCACGTTGGTCCCTTTGGTCAGCGGTATAAGTCTTCAAAAGCTTACCGCAGGACCTGTATTTGGCATTGACAAGGAAAAAAACGACAGGCTTACGGTTGTGACTGCCATACATACACTAACTTTTTTTCCGGTTGTTTCTCTCCTTCTCGAGGAACTGAAGCTCCTCAATTCTGAAATCGGCCGGTTAAGCCTGACTGCTACAATAGTCTGTGAGCTCTTAAGTTTGTTTCTCCAGTTTGTTAACAGATCAATTTCATCCATAACTAATGAAGGACATCAGGGGGATTTAGTACACCTCGCAATAGCCTTTGGTTACATTACTTCTGTTGCGGTAATATTTAGACCAATAATGTTATGGGTTGTTAGGAAGACCCCGGACAACAGGCCTGTCAAGAAAATCTATCTCAATGCCATAGTCCTGCTGGTGTTTGTGTCTGGAATAGGTTCACATCTATACGGCCAGACATTTCATTTTGGCCCTCTCATATTTGGTTTGGCTGTCCCAGCTGGACAACCTCTGGGATCGGCTTTGGAAGAAAAATTCCATCTCTTTGTTTTCGAAGTGTTTCTACCCCTTTTTGTGACTACATATGCAATGAGGGCTGATTTTGGGTCGATCAGATTGGACGATCCAAGAACACAGCTTACTATAATCCTCATAGTCCTCATTTTTGTGGTCAAAATATTAGCCACCATGGTCGCTCCGTTATATTTTAAGGTTCCCTTAACCGATGCATTTGTTCTTGCTCTCATTTTGAGCTGCAGAGGGATTATCCACCTTGGCACCTATACTTGGTACAGCGACACCCGGATGATAGATGATTCTGCTGATTCTGTGTATGCTGTGACACTCGCTAGCGTTGTAGTGACTTCAACTCTCGTGCCTATTATAGTGAAGCGCCTCTATGATCCTTCAAGAAAATACGCAGGCTACGAGAGAAGGGACATTATGCATTTGAAACCTAATGCAGAGCTCAAAATTCTTACCTGCATCCACAGGTCATCTAACATGCCTGCAGTGATCAATCTACTTGATGCAGCATGTCCATCTAAAGAAAACCCCATTAATGTTTGTGTACTCCATCTCATCGAATTAATCGGCAGAACGGCTCCCATATTTATCTCCCACCAAGTGCAGGGGAAAACAGTTTCCCGTGTTAATACATATTCAGCAAATGTCATTCTTTATTTCAATCAGTTTGAGAAAGAAAATCGTGGTGCTGTTAATTTGAGCATATTCACAGCAATCTCTCCACCAAATATCATGCATGAAGACATATGCACGCTTGCAATGGACAAGCTCACATCCCTAATAATCCTCCCATTTCATCGAAAATGGTGGATTGATGGGTCCAGTATTGAGTCGGAAGACAACACTATAAGGACACTAAACTTCAGTGTACTCGAAAGAGCTCCTTGTTCCGTTGGTATCCTTGTGGATCGGGGACATTTAGGTCGGTCCACCTCTGTTGTATCCACACTATCAACATTTTCGGTTGCTGTAGTCTTCTTGGGAGGGAAAGATGACAGGGAGGCATTGACCTTTGCCAAAAGAATGGCCAGGGACTCGACGATTAGGTTAACAGTAATCCATTTAGTGGCCATGGGTAATGAATATGCTGGTGGGGAATGGGATAAAATACTGGATGCAGAGGTATTGAAGGAATTCAAATATTACCATGTGGGTGAAGGTCTTGTAATATATTTAGAGGAAATGGTGAAAGATGGACCGCAAACAGCCTTTCTATTAAGGTCTATGGTGGAAGAGTATGATATAATCATAGTTGGGAGAAGTCATAAGTTAGAGTCACCTCAGACAGTAGGGCTTTCCGAATGGTGCGAATTTCCGGAGTTGGGGATAATAGGAGACTTGCTTGCATCACCTGATGTCGATTGTAAGGCCTCCGTTCTTGTGATACAACAACAAGAGCTGAGCAGATGCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

792

Amino Acids

87.9

Weight (kDa)

7.08

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 54 - 443 8.1e-31 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 503 - 630 1.5e-11 Plant cation/H(+) antiporter domain
CHX17_C PF23259 641 - 786 8.1e-11 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000007)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17680 AT5G17680
fragaria_vesca FvH4_1g04740 FvH4_1g04740 FvH4_1g04740 FvH4_1g07010 FvH4_1g07020 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11580 FvH4_1g17862 FvH4_1g22370 FvH4_1g22372 FvH4_1g22377 FvH4_1g22512 FvH4_2g00540 FvH4_2g00541 FvH4_2g00550 FvH4_2g00950 FvH4_2g14320 FvH4_2g14320 FvH4_2g14321 FvH4_3g33030 FvH4_3g33030 FvH4_3g33030 FvH4_3g35620 FvH4_3g35630 FvH4_3g36130 FvH4_3g36131 FvH4_3g36140 FvH4_5g02251 FvH4_6g04060 FvH4_6g04250 FvH4_6g04250 FvH4_6g04250 FvH4_6g04350 FvH4_6g04730 FvH4_6g04730 FvH4_6g05490 FvH4_6g05610 FvH4_6g05610 FvH4_7g12160 FvH4_7g12160 FvH4_7g12160 FvH4_7g21060 FvH4_7g21060 FvH4_7g21060 FvH4_7g21070 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21150 FvH4_7g21170 FvH4_7g21170 FvH4_7g21171 FvH4_7g21172 FvH4_7g21180 FvH4_7g21201 FvH4_7g21201 FvH4_7g21230 FvH4_7g21230 FvH4_7g21230 FvH4_7g28631 FvH4_7g32440 FvH4_7g32460 FvH4_7g32464 FvH4_7g32470 FvH4_7g32480 FvH4_7g32710 FvH4_7g32720 FvH4_7g32740 FvH4_7g32740 FvH4_7g32740 FvH4_7g32760 FvH4_7g33140
malus_domestica MD00G1125900.v1.1 MD00G1126000.v1.1 MD00G1126100.v1.1 MD04G1054900.v1.1 MD05G1007000.v1.1 MD05G1018900.v1.1 MD05G1019700.v1.1 MD05G1020000.v1.1 MD05G1020100.v1.1 MD05G1022400.v1.1 MD05G1022500.v1.1 MD05G1022600.v1.1 MD05G1022800.v1.1 MD05G1028700.v1.1 MD05G1100200.v1.1 MD08G1021900.v1.1 MD10G1006500.v1.1 MD10G1006900.v1.1 MD10G1007200.v1.1 MD10G1007600.v1.1 MD10G1015300.v1.1 MD10G1018400.v1.1 MD10G1018500.v1.1 MD10G1018900.v1.1 MD10G1019200.v1.1 MD10G1019700.v1.1 MD10G1020000.v1.1 MD10G1020100.v1.1 MD10G1020900.v1.1 MD10G1021000.v1.1 MD10G1034300.v1.1 MD10G1034400.v1.1 MD10G1034700.v1.1 MD10G1034800.v1.1 MD10G1035000.v1.1 MD10G1035400.v1.1 MD10G1232400.v1.1 MD15G1377300.v1.1 MD15G1377400.v1.1
prunus_persica Prupe.1G165300_v2.0.a1 Prupe.1G165300_v2.0.a1 Prupe.1G523900_v2.0.a1 Prupe.1G524000_v2.0.a1 Prupe.1G526300_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.3G169500_v2.0.a1 Prupe.6G109800_v2.0.a1 Prupe.7G026100_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037600_v2.0.a1 Prupe.8G005100_v2.0.a1 Prupe.8G005300_v2.0.a1 Prupe.8G021700_v2.0.a1 Prupe.8G022800_v2.0.a1 Prupe.8G023100_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023300_v2.0.a1 Prupe.8G023500_v2.0.a1 Prupe.8G023600_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023900_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G027000_v2.0.a1 Prupe.8G027100_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G032000_v2.0.a1 Prupe.8G034700_v2.0.a1 Prupe.8G046500_v2.0.a1 Prupe.8G046700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1
pyrus_communis pycom05g01130 pycom05g01150 pycom05g01160 pycom05g01330 pycom05g01340 pycom05g01350 pycom05g01360 pycom05g01390 pycom05g01400 pycom05g01420 pycom05g01430 pycom10g00470 pycom10g00970 pycom10g00980 pycom10g00990 pycom10g01000 pycom10g01340 pycom10g01350 pycom10g01360 pycom10g01390 pycom10g01400 pycom10g01410 pycom10g01420 pycom10g01430 pycom10g02280 pycom10g02300 pycom10g02310 pycom10g02330 pycom10g02340 pycom10g02370 pycom10g02390 pycom10g02400 pycom12g00770 pycom15g33690 pycom15g33720 pycom15g33740 pycom15g33750 pycom15g33800
rosa_chinensis RchiOBHm_Chr1g0340831 RchiOBHm_Chr1g0365481 RchiOBHm_Chr1g0365531 RchiOBHm_Chr1g0365541 RchiOBHm_Chr1g0365551 RchiOBHm_Chr1g0365561 RchiOBHm_Chr1g0365641 RchiOBHm_Chr1g0382021 RchiOBHm_Chr1g0382041 RchiOBHm_Chr1g0382221 RchiOBHm_Chr1g0382261 RchiOBHm_Chr1g0382271 RchiOBHm_Chr1g0382281 RchiOBHm_Chr1g0382321 RchiOBHm_Chr3g0465111 RchiOBHm_Chr3g0481881 RchiOBHm_Chr3g0481891 RchiOBHm_Chr3g0481981 RchiOBHm_Chr3g0482041 RchiOBHm_Chr5g0055581 RchiOBHm_Chr5g0060381 RchiOBHm_Chr5g0061111 RchiOBHm_Chr5g0063811 RchiOBHm_Chr5g0064561 RchiOBHm_Chr5g0064571 RchiOBHm_Chr5g0064661 RchiOBHm_Chr5g0064701 RchiOBHm_Chr5g0064731 RchiOBHm_Chr5g0064871 RchiOBHm_Chr6g0245321 RchiOBHm_Chr6g0245331 RchiOBHm_Chr6g0245341 RchiOBHm_Chr6g0245481 RchiOBHm_Chr6g0245501 RchiOBHm_Chr6g0245551 RchiOBHm_Chr6g0246391 RchiOBHm_Chr6g0246501 RchiOBHm_Chr6g0246541 RchiOBHm_Chr6g0246601 RchiOBHm_Chr6g0246671 RchiOBHm_Chr6g0246721 RchiOBHm_Chr6g0246751 RchiOBHm_Chr6g0246861 RchiOBHm_Chr6g0246881 RchiOBHm_Chr6g0246891 RchiOBHm_Chr6g0249221 RchiOBHm_Chr6g0249691 RchiOBHm_Chr6g0249721 RchiOBHm_Chr6g0249731 RchiOBHm_Chr6g0249751 RchiOBHm_Chr6g0249841 RchiOBHm_Chr6g0249881 RchiOBHm_Chr6g0249921 RchiOBHm_Chr6g0249931 RchiOBHm_Chr6g0249951 RchiOBHm_Chr6g0250011 RchiOBHm_Chr6g0250021 RchiOBHm_Chr6g0250081 RchiOBHm_Chr6g0250091 RchiOBHm_Chr6g0250131 RchiOBHm_Chr6g0250161 RchiOBHm_Chr6g0250201 RchiOBHm_Chr6g0250241 RchiOBHm_Chr6g0250291 RchiOBHm_Chr6g0250301 RchiOBHm_Chr6g0250371 RchiOBHm_Chr6g0250771 RchiOBHm_Chr6g0250981 RchiOBHm_Chr6g0251301 RchiOBHm_Chr6g0251321 RchiOBHm_Chr6g0251341 RchiOBHm_Chr6g0251441 RchiOBHm_Chr6g0251471 RchiOBHm_Chr6g0272741 RchiOBHm_Chr6g0276581 RchiOBHm_Chr6g0276591 RchiOBHm_Chr6g0276631 RchiOBHm_Chr6g0284581 RchiOBHm_Chr6g0284641 RchiOBHm_Chr6g0285091 RchiOBHm_Chr7g0217981
rosa_laevigata RLG00000002427 RLG00000003507 RLG00000008496 RLG00000012678 RLG00000012735 RLG00000012736 RLG00000013083 RLG00000013084 RLG00000013384 RLG00000013386 RLG00000013660 RLG00000015037 RLG00000015242 RLG00000015253 RLG00000015255 RLG00000015256 RLG00000015259 RLG00000015307 RLG00000015465 RLG00000015466 RLG00000015504 RLG00000015506 RLG00000015507 RLG00000015510 RLG00000015513 RLG00000015544 RLG00000015545 RLG00000015549 RLG00000015550 RLG00000015552 RLG00000016855 RLG00000016858 RLG00000016859 RLG00000018281 RLG00000018283 RLG00000022622 RLG00000023379 RLG00000023937 RLG00000024655 RLG00000026187 RLG00000026189 RLG00000026190 RLG00000026191 RLG00000026192 RLG00000027420 RLG00000027421 RLG00000027661 RLG00000028903 RLG00000028904 RLG00000030248 RLG00000035359 RLG00000035360 RLG00000035361 RLG00000035429 RLG00000035456 RLG00000035679 RLG00000035680 RLG00000035681 RLG00000035735 RLG00000035738 RLG00000035844 RLG00000036364
rosa_multiflora Rmu_co8335069.1_g000001 Rmu_co8396115.1_g000001 Rmu_co8448557.1_g000001 Rmu_co8510855.1_g000001 Rmu_sc0000110.1_g000004 Rmu_sc0000110.1_g000007 Rmu_sc0000110.1_g000018 Rmu_sc0000110.1_g000019 Rmu_sc0000110.1_g000022 Rmu_sc0000110.1_g000023 Rmu_sc0000110.1_g000033 Rmu_sc0000110.1_g000037 Rmu_sc0000110.1_g000039 Rmu_sc0000276.1_g000031 Rmu_sc0000276.1_g000034 Rmu_sc0000411.1_g000006 Rmu_sc0000411.1_g000007 Rmu_sc0000452.1_g000027 Rmu_sc0000471.1_g000009 Rmu_sc0000507.1_g000020 Rmu_sc0000694.1_g000018 Rmu_sc0000701.1_g000002 Rmu_sc0000701.1_g000009 Rmu_sc0000701.1_g000010 Rmu_sc0000704.1_g000001 Rmu_sc0000704.1_g000042 Rmu_sc0000704.1_g000043 Rmu_sc0000969.1_g000002 Rmu_sc0001001.1_g000003 Rmu_sc0001066.1_g000004 Rmu_sc0001066.1_g000019 Rmu_sc0001209.1_g000023 Rmu_sc0001209.1_g000040 Rmu_sc0001209.1_g000043 Rmu_sc0001237.1_g000018 Rmu_sc0001246.1_g000016 Rmu_sc0001293.1_g000008 Rmu_sc0001293.1_g000011 Rmu_sc0001293.1_g000022 Rmu_sc0001293.1_g000023 Rmu_sc0001373.1_g000014 Rmu_sc0001382.1_g000001 Rmu_sc0001738.1_g000024 Rmu_sc0002025.1_g000009 Rmu_sc0002025.1_g000012 Rmu_sc0002025.1_g000013 Rmu_sc0002093.1_g000004 Rmu_sc0002202.1_g000008 Rmu_sc0002202.1_g000010 Rmu_sc0002202.1_g000011 Rmu_sc0002202.1_g000018 Rmu_sc0002406.1_g000014 Rmu_sc0002478.1_g000003 Rmu_sc0002535.1_g000042 Rmu_sc0002587.1_g000021 Rmu_sc0002587.1_g000023 Rmu_sc0002587.1_g000028 Rmu_sc0002587.1_g000039 Rmu_sc0002587.1_g000044 Rmu_sc0002587.1_g000048 Rmu_sc0002587.1_g000049 Rmu_sc0002793.1_g000005 Rmu_sc0003060.1_g000003 Rmu_sc0003060.1_g000004 Rmu_sc0003060.1_g000005 Rmu_sc0003131.1_g000001 Rmu_sc0003131.1_g000032 Rmu_sc0003255.1_g000009 Rmu_sc0003255.1_g000017 Rmu_sc0003270.1_g000028 Rmu_sc0003293.1_g000004 Rmu_sc0003293.1_g000008 Rmu_sc0003293.1_g000010 Rmu_sc0003352.1_g000009 Rmu_sc0003352.1_g000012 Rmu_sc0003386.1_g000012 Rmu_sc0003387.1_g000003 Rmu_sc0003387.1_g000007 Rmu_sc0003665.1_g000002 Rmu_sc0003811.1_g000001 Rmu_sc0004049.1_g000001 Rmu_sc0004191.1_g000039 Rmu_sc0004691.1_g000008 Rmu_sc0005257.1_g000014 Rmu_sc0005257.1_g000020 Rmu_sc0005685.1_g000005 Rmu_sc0006032.1_g000010 Rmu_sc0006638.1_g000016 Rmu_sc0006878.1_g000005 Rmu_sc0007049.1_g000005 Rmu_sc0007049.1_g000011 Rmu_sc0007049.1_g000012 Rmu_sc0007049.1_g000013 Rmu_sc0007049.1_g000014 Rmu_sc0007383.1_g000001 Rmu_sc0007383.1_g000005 Rmu_sc0007383.1_g000012 Rmu_sc0007558.1_g000003 Rmu_sc0007558.1_g000005 Rmu_sc0007722.1_g000001 Rmu_sc0008209.1_g000002 Rmu_sc0008209.1_g000008 Rmu_sc0008242.1_g000013 Rmu_sc0008965.1_g000001 Rmu_sc0009002.1_g000002 Rmu_sc0009002.1_g000006 Rmu_sc0009002.1_g000007 Rmu_sc0009002.1_g000010 Rmu_sc0009002.1_g000011 Rmu_sc0009227.1_g000011 Rmu_sc0009369.1_g000008 Rmu_sc0009380.1_g000013 Rmu_sc0009451.1_g000011 Rmu_sc0009952.1_g000008 Rmu_sc0009991.1_g000004 Rmu_sc0010993.1_g000005 Rmu_sc0010993.1_g000006 Rmu_sc0012343.1_g000012 Rmu_sc0014236.1_g000002 Rmu_sc0014912.1_g000002 Rmu_sc0014912.1_g000003 Rmu_sc0019669.1_g000001 Rmu_sc0020903.1_g000007 Rmu_sc0021230.1_g000001 Rmu_sc0022147.1_g000001 Rmu_sc0028629.1_g000002 Rmu_sc0031029.1_g000001 Rmu_sc0038922.1_g000001 Rmu_sc0039683.1_g000001 Rmu_sc0039712.1_g000001 Rmu_sc0043027.1_g000001 Rmu_ssc0000009.1_g000002 Rmu_ssc0000009.1_g000004 Rmu_ssc0000309.1_g000010
rosa_roxburghii Rroxscaffold_1G00014850 Rroxscaffold_1G00016420 Rroxscaffold_1G00016430 Rroxscaffold_1G00016970 Rroxscaffold_1G00016980 Rroxscaffold_1G00017020 Rroxscaffold_2G00103000 Rroxscaffold_2G00103010 Rroxscaffold_2G00121260 Rroxscaffold_2G00127090 Rroxscaffold_2G00127120 Rroxscaffold_2G00143350 Rroxscaffold_2G00143360 Rroxscaffold_3G00218090 Rroxscaffold_3G00232940 Rroxscaffold_3G00241540 Rroxscaffold_3G00241550 Rroxscaffold_4G00278190 Rroxscaffold_4G00278220 Rroxscaffold_4G00278240 Rroxscaffold_4G00278260 Rroxscaffold_4G00291120 Rroxscaffold_4G00291140 Rroxscaffold_4G00291150 Rroxscaffold_4G00291160 Rroxscaffold_4G00291180 Rroxscaffold_4G00291220 Rroxscaffold_4G00294350 Rroxscaffold_4G00304090 Rroxscaffold_4G00309820 Rroxscaffold_4G00314470 Rroxscaffold_6G00392280 Rroxscaffold_6G00399770 Rroxscaffold_6G00399780 Rroxscaffold_6G00399800 Rroxscaffold_6G00400110 Rroxscaffold_6G00400130 Rroxscaffold_6G00415240 Rroxscaffold_7G00183750 Rroxscaffold_7G00184040 Rroxscaffold_7G00184570 Rroxscaffold_7G00184580 Rroxscaffold_7G00192150 Rroxscaffold_7G00192460 Rroxscaffold_7G00196030 Rroxscaffold_7G00211080 Rroxscaffold_7G00214480 Rroxscaffold_7G00214490 Rroxscaffold_7G00214570 Rroxscaffold_7G00214580 Rroxscaffold_7G00214590 Rroxscaffold_7G00214610 Rroxscaffold_7G00214620 Rroxscaffold_7G00214790 Rroxscaffold_7G00216630 Rroxscaffold_7G00216640 Rroxscaffold_7G00216670 Rroxscaffold_7G00216680 Rroxscaffold_7G00216690 Rroxscaffold_7G00216730 Rroxscaffold_7G00216770 Rroxscaffold_7G00216780 Rroxscaffold_7G00216820 Rroxscaffold_7G00216830 Rroxscaffold_7G00217280 Rroxscaffold_7G00217310 Rroxscaffold_7G00217320 Rroxscaffold_7G00217330
rosa_rugosa Rorug01G0040400 Rorug01G0173300 Rorug01G0173400 Rorug01G0296100 Rorug01G0296200 Rorug01G0296300 Rorug01G0296400 Rorug01G0322300 Rorug01G0432900 Rorug01G0433100 Rorug01G0433200 Rorug01G0433500 Rorug02G0054900 Rorug02G0077900 Rorug02G0078000 Rorug02G0078100 Rorug02G0207300 Rorug02G0242200 Rorug02G0242300 Rorug03G0075500 Rorug03G0075500 Rorug03G0194300 Rorug05G0329100 Rorug05G0329300 Rorug05G0360000 Rorug05G0360000 Rorug05G0360300 Rorug05G0360400.1 Rorug05G0360500 Rorug05G0364200 Rorug05G0366200 Rorug05G0366300 Rorug05G0366400 Rorug05G0366600 Rorug05G0376400 Rorug05G0376500 Rorug05G0421100 Rorug05G0494600 Rorug05G0494800 Rorug05G0494900 Rorug05G0495100 Rorug05G0495200 Rorug05G0495900 Rorug05G0498200 Rorug05G0498200 Rorug05G0498300.1 Rorug05G0499100 Rorug05G0501700 Rorug05G0501800 Rorug05G0501900 Rorug05G0513800 Rorug05G0514100 Rorug05G0514200 Rorug05G0514200 Rorug05G0514500 Rorug05G0519200 Rorug05G0519300.1 Rorug05G0519400 Rorug05G0519400 Rorug05G0520600 Rorug05G0520700 Rorug05G0520800 Rorug05G0521300 Rorug05G0521400 Rorug05G0521500 Rorug05G0550800 Rorug06G0070400 Rorug06G0070500 Rorug06G0070600 Rorug06G0099500 Rorug06G0099600 Rorug06G0102100 Rorug06G0102200 Rorug06G0102300 Rorug06G0102300 Rorug06G0102400 Rorug06G0162500 Rorug06G0164500 Rorug06G0164600 Rorug06G0164800 Rorug06G0170600 Rorug07G0172900 Rorug07G0172900 Rorug07G0172900 Rorug07G0173000
rosa_samantha Rh1BG156400 Rh1BG156500 Rh1BG156600 Rh1BG292400 Rh1BG413500 Rh1BG413800 Rh1BG414100 Rh1BG414200 Rh1BG414400 Rh1CG059400 Rh1CG309000 Rh1CG428300 Rh1CG428400 Rh2BG129800 Rh2BG273700 Rh2CG131000 Rh2DG131300 Rh3AG245200 Rh3AG245600 Rh3BG139100 Rh3BG280400 Rh3BG280500 Rh3CG141200 Rh3CG149500 Rh3CG275400 Rh3CG275800 Rh3CG276500 Rh3CG276800 Rh3DG140400 Rh3DG272100 Rh3DG272300 Rh3DG272400 Rh3DG272700 Rh3DG272800 Rh3DG272900 Rh5AG099100 Rh5AG424200 Rh5AG435200 Rh5BG411900 Rh5BG439500 Rh5CG108000 Rh5CG436900 Rh5CG457800 Rh5CG462200 Rh5CG462300 Rh6AG033600 Rh6AG186700 Rh6BG190100 Rh6BG215300 Rh6BG217600 Rh6BG217800 Rh6CG188800 Rh6CG284800 Rh6DG003400 Rh6DG008400 Rh6DG008700 Rh6DG008800 Rh6DG009100 Rh6DG009400 Rh6DG025100 Rh6DG180300 Rh6DG209700 Rh6DG210100 Rh6DG272100 Rh6DG272300 Rh6DG273000 Rh7BG305400
rosa_wichuraiana Rw0G010970 Rw0G011460 Rw0G017090 Rw0G023140 Rw1G007890 Rw1G010200 Rw1G015630 Rw1G015640 Rw1G029350 Rw1G029370 Rw1G029380 Rw1G029390 Rw1G029400 Rw1G041290 Rw1G041560 Rw2G009760 Rw2G009770 Rw2G020640 Rw2G021670 Rw2G021690 Rw2G024060 Rw3G011380 Rw3G021890 Rw3G021910 Rw3G021940 Rw3G021950 Rw3G021960 Rw5G037070 Rw5G037080 Rw5G037090 Rw5G039330 Rw5G039890 Rw5G039900 Rw5G039920 Rw5G040740 Rw6G000500 Rw6G000510 Rw6G000520 Rw6G000550 Rw6G000570 Rw6G000580 Rw6G000610 Rw6G000820 Rw6G001070 Rw6G001090 Rw6G001100 Rw6G001170 Rw6G001180 Rw6G001260 Rw6G001270 Rw6G001280 Rw6G001300 Rw6G002450 Rw6G002470 Rw6G002500 Rw6G002830 Rw6G002870 Rw6G003000 Rw6G003080 Rw6G016110 Rw6G018400 Rw6G018590 Rw6G018610 Rw6G023840 Rw6G023880 Rw6G024250 Rw6G024260 Rw7G026620

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1884
Acc16I TGCGCA 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 1427
AccB1I GGYRCC 1 cut(s) 1214
AccB7I CCANNNNNTGG 1 cut(s) 2029
AccI GTMKAC 2 cut(s) 223, 300
AccIII TCCGGA 1 cut(s) 2278
AciI CCGC 5 cut(s) 218, 453, 477, 761, 2162
AclWI GGATC 5 cut(s) 406, 961, 1055, 1334, 1878
AcoI YGGCCR 6 cut(s) 135, 232, 610, 889, 1989, 2031
AcsI RAATTY 4 cut(s) 971, 1410, 2096, 2273
AcuI CTGAAG 2 cut(s) 608, 1810
AdeI CACNNNGTG 1 cut(s) 1564
AfaI GTAC 6 cut(s) 60, 424, 723, 1229, 1509, 1833
AfiI CCNNNNNNNGG 7 cut(s) 265, 491, 580, 1224, 1567, 2029, 2285
AflII CTTAAG 1 cut(s) 649
AgeI ACCGGT 1 cut(s) 419
AjnI CCWGG 1 cut(s) 1991
AloI GAACNNNNNNTCC 2 cut(s) 576, 608
Alw21I GWGCWC 3 cut(s) 648, 1407, 1846
Alw26I GTCTC 1 cut(s) 2292
AlwI GGATC 5 cut(s) 406, 961, 1055, 1334, 1878
AlwNI CAGNNNCTG 1 cut(s) 485
Ama87I CYCGRG 2 cut(s) 260, 578
Aor13HI TCCGGA 1 cut(s) 2278
AoxI GGCC 9 cut(s) 135, 232, 610, 815, 889, 907, 1989, 2031, 2331
ApeKI GCWGC 2 cut(s) 1191, 1469
ApoI RAATTY 4 cut(s) 971, 1410, 2096, 2273
AseI ATTAAT 2 cut(s) 1497, 1526
AsiGI ACCGGT 1 cut(s) 419
Asp700I GAANNNNTTC 3 cut(s) 874, 996, 2096
AspLEI GCGC 2 cut(s) 34, 1332
AspS9I GGNCC 6 cut(s) 439, 482, 908, 1782, 1890, 2159
AsuC2I CCSGG 2 cut(s) 806, 1240
AsuHPI GGTGA 7 cut(s) 145, 341, 409, 2129, 2161, 2232, 2304
AsuII TTCGAA 1 cut(s) 990
AsuNHI GCTAGC 1 cut(s) 1286
AvaI CYCGRG 2 cut(s) 260, 578
AvaII GGWCC 5 cut(s) 439, 482, 1782, 1890, 2159
BalI TGGCCA 3 cut(s) 137, 1991, 2033
BanI GGYRCC 1 cut(s) 1214
BanII GRGCYC 3 cut(s) 648, 1407, 1846
BarI GAAGNNNNNNTAC 2 cut(s) 984, 1016
BauI CACGAG 1 cut(s) 1310
BbsI GAAGAC 5 cut(s) 455, 806, 1710, 1806, 1930
Bbv12I GWGCWC 3 cut(s) 648, 1407, 1846
BbvCI CCTCAGC 1 cut(s) 251
BbvI GCAGC 2 cut(s) 1178, 1481
BccI CCATC 7 cut(s) 127, 146, 984, 1486, 1521, 1772, 2150
BceAI ACGGC 2 cut(s) 904, 1554
BciT130I CCWGG 1 cut(s) 1993
BciVI GTATCC 2 cut(s) 1871, 1915
BclI TGATCA 1 cut(s) 1452
BcnI CCSGG 2 cut(s) 806, 1240
BcoDI GTCTC 1 cut(s) 2292
BfaI CTAG 1 cut(s) 1287
BfmI CTRYAG 4 cut(s) 297, 1192, 1446, 1932
BfoI RGCGCY 1 cut(s) 1333
BfrI CTTAAG 1 cut(s) 649
BfuAI ACCTGC 1 cut(s) 1427
BfuI GTATCC 2 cut(s) 1871, 1915
BglI GCCNNNNNGGC 1 cut(s) 240
BisI GCNGC 2 cut(s) 1192, 1470
BlpI GCTNAGC 1 cut(s) 2363
BlsI GCNGC 2 cut(s) 1193, 1471
Bme1390I CCNGG 3 cut(s) 806, 1240, 1993
Bme18I GGWCC 5 cut(s) 439, 482, 1782, 1890, 2159
BmeT110I CYCGRG 2 cut(s) 260, 578
BmgT120I GGNCC 6 cut(s) 439, 482, 908, 1782, 1890, 2159
BmiI GGNNCC 5 cut(s) 441, 1152, 1216, 1542, 1783
BmrFI CCNGG 3 cut(s) 806, 1240, 1993
BmrI ACTGGG 1 cut(s) 110
BmsI GCATC 7 cut(s) 108, 1153, 1431, 1456, 2068, 2318, 2360
BmtI GCTAGC 1 cut(s) 1290
BmuI ACTGGG 1 cut(s) 110
BpiI GAAGAC 5 cut(s) 455, 806, 1710, 1806, 1930
BpmI CTGGAG 1 cut(s) 647
Bpu10I CCTNAGC 1 cut(s) 251
Bpu1102I GCTNAGC 1 cut(s) 2363
Bpu14I TTCGAA 1 cut(s) 990
BpuMI CCSGG 2 cut(s) 806, 1240
BsaBI GATNNNNATC 2 cut(s) 12, 137
BsaJI CCNNGG 8 cut(s) 229, 238, 259, 804, 1125, 1210, 1992, 2034
BsaWI WCCGGW 4 cut(s) 19, 419, 559, 2278
BsaXI ACNNNNNCTCC 2 cut(s) 576, 606
Bsc4I CCNNNNNNNGG 7 cut(s) 265, 491, 580, 1224, 1567, 2029, 2285
Bse118I RCCGGY 2 cut(s) 419, 612
Bse1I ACTGG 4 cut(s) 105, 664, 1785, 2079
Bse3DI GCAATG 2 cut(s) 1032, 1728
Bse8I GATNNNNATC 2 cut(s) 12, 137
BseAI TCCGGA 1 cut(s) 2278
BseBI CCWGG 1 cut(s) 1993
BseDI CCNNGG 8 cut(s) 229, 238, 259, 804, 1125, 1210, 1992, 2034
BseGI GGATG 6 cut(s) 16, 686, 1248, 1422, 1736, 2083
BseJI GATNNNNATC 2 cut(s) 12, 137
BseLI CCNNNNNNNGG 7 cut(s) 265, 491, 580, 1224, 1567, 2029, 2285
BseMI GCAATG 2 cut(s) 1032, 1728
BseMII CTCAG 3 cut(s) 265, 2258, 2354
BseNI ACTGG 4 cut(s) 105, 664, 1785, 2079
BseRI GAGGAG 3 cut(s) 218, 248, 584
BseX3I CGGCCG 1 cut(s) 610
BseXI GCAGC 2 cut(s) 1178, 1481
BseYI CCCAGC 1 cut(s) 934
BsgI GTGCAG 1 cut(s) 1586
Bsh1285I CGRYCG 1 cut(s) 613
BshFI GGCC 9 cut(s) 137, 234, 612, 817, 891, 909, 1991, 2033, 2333
BshNI GGYRCC 1 cut(s) 1214
BshTI ACCGGT 1 cut(s) 419
BsiEI CGRYCG 1 cut(s) 613
BsiHKAI GWGCWC 3 cut(s) 648, 1407, 1846
BsiHKCI CYCGRG 2 cut(s) 260, 578
BsiSI CCGG 7 cut(s) 20, 420, 560, 613, 806, 1240, 2279
BslFI GGGAC 7 cut(s) 111, 277, 425, 917, 1388, 1890, 2009
BslI CCNNNNNNNGG 7 cut(s) 265, 491, 580, 1224, 1567, 2029, 2285
BsmAI GTCTC 1 cut(s) 2292
BsmFI GGGAC 7 cut(s) 111, 277, 425, 917, 1388, 1890, 2009
BsnI GGCC 9 cut(s) 137, 234, 612, 817, 891, 909, 1991, 2033, 2333
BsoBI CYCGRG 2 cut(s) 260, 578
Bsp119I TTCGAA 1 cut(s) 990
Bsp1286I GDGCHC 3 cut(s) 648, 1407, 1846
Bsp13I TCCGGA 1 cut(s) 2278
Bsp143I GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
Bsp1720I GCTNAGC 1 cut(s) 2363
Bsp19I CCATGG 2 cut(s) 1125, 2034
BspACI CCGC 5 cut(s) 218, 453, 477, 761, 2162
BspANI GGCC 9 cut(s) 137, 234, 612, 817, 891, 909, 1991, 2033, 2333
BspCNI CTCAG 3 cut(s) 264, 2257, 2355
BspEI TCCGGA 1 cut(s) 2278
BspLI GGNNCC 5 cut(s) 441, 1152, 1216, 1542, 1783
BspMAI CTGCAG 2 cut(s) 1196, 1450
BspMI ACCTGC 1 cut(s) 1427
BspOI GCTAGC 1 cut(s) 1290
BspPI GGATC 5 cut(s) 406, 961, 1055, 1334, 1878
BspT104I TTCGAA 1 cut(s) 990
BspT107I GGYRCC 1 cut(s) 1214
BspTI CTTAAG 1 cut(s) 649
BsrDI GCAATG 2 cut(s) 1032, 1728
BsrFI RCCGGY 2 cut(s) 419, 612
BsrI ACTGG 4 cut(s) 105, 664, 1785, 2079
BssAI RCCGGY 2 cut(s) 419, 612
BssECI CCNNGG 8 cut(s) 229, 238, 259, 804, 1125, 1210, 1992, 2034
BssMI GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
BssNAI GTATAC 1 cut(s) 224
BssSI CACGAG 1 cut(s) 1310
BssT1I CCWWGG 4 cut(s) 238, 1125, 1210, 2034
Bst1107I GTATAC 1 cut(s) 224
Bst2BI CACGAG 1 cut(s) 1310
Bst2UI CCWGG 1 cut(s) 1993
Bst4CI ACNGT 5 cut(s) 305, 526, 1579, 2017, 2251
Bst6I CTCTTC 1 cut(s) 2190
BstAFI CTTAAG 1 cut(s) 649
BstBI TTCGAA 1 cut(s) 990
BstC8I GCNNGC 7 cut(s) 209, 1288, 1360, 1446, 1715, 1719, 2307
BstDEI CTNAG 4 cut(s) 195, 251, 2244, 2363
BstDSI CCRYGG 2 cut(s) 1125, 2034
BstENI CCTNNNNNAGG 1 cut(s) 578
BstF5I GGATG 6 cut(s) 16, 686, 1248, 1422, 1736, 2083
BstH2I RGCGCY 1 cut(s) 1333
BstHHI GCGC 2 cut(s) 34, 1332
BstKTI GATC 9 cut(s) 91, 414, 680, 956, 1050, 1063, 1342, 1455, 1873
BstMAI GTCTC 1 cut(s) 2292
BstMBI GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
BstMCI CGRYCG 1 cut(s) 613
BstMWI GCNNNNNNNGC 5 cut(s) 127, 240, 618, 935, 1031
BstNI CCWGG 1 cut(s) 1993
BstNSI RCATGY 2 cut(s) 1444, 1476
BstSCI CCNGG 3 cut(s) 804, 1238, 1991
BstSFI CTRYAG 4 cut(s) 297, 1192, 1446, 1932
BstV1I GCAGC 2 cut(s) 1178, 1481
BstV2I GAAGAC 5 cut(s) 455, 806, 1710, 1806, 1930
BstXI CCANNNNNNTGG 1 cut(s) 1987
BstZ17I GTATAC 1 cut(s) 224
BstZI CGGCCG 1 cut(s) 610
BsuI GTATCC 2 cut(s) 1871, 1915
BsuRI GGCC 9 cut(s) 137, 234, 612, 817, 891, 909, 1991, 2033, 2333
BtgI CCRYGG 2 cut(s) 1125, 2034
BtsCI GGATG 6 cut(s) 16, 686, 1248, 1422, 1736, 2083
BtsI GCAGTG 2 cut(s) 41, 1455
BtsIMutI CAGTG 3 cut(s) 41, 1455, 1834
BveI ACCTGC 1 cut(s) 1427
Cac8I GCNNGC 7 cut(s) 209, 1288, 1360, 1446, 1715, 1719, 2307
CaiI CAGNNNCTG 1 cut(s) 485
CfoI GCGC 2 cut(s) 34, 1332
Cfr10I RCCGGY 2 cut(s) 419, 612
Cfr13I GGNCC 6 cut(s) 439, 482, 908, 1782, 1890, 2159
CseI GACGC 1 cut(s) 290
Csp6I GTAC 6 cut(s) 59, 423, 722, 1228, 1508, 1832
CspAI ACCGGT 1 cut(s) 419
CspCI CAANNNNNGTGG 2 cut(s) 1882, 1917
CviAII CATG 7 cut(s) 1126, 1441, 1473, 1696, 1700, 2035, 2111
CviQI GTAC 6 cut(s) 59, 423, 722, 1228, 1508, 1832
DdeI CTNAG 4 cut(s) 195, 251, 2244, 2363
DpnI GATC 9 cut(s) 90, 413, 679, 955, 1049, 1062, 1341, 1454, 1872
DpnII GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
DraIII CACNNNGTG 1 cut(s) 1564
DrdI GACNNNNNNGTC 1 cut(s) 1884
DseDI GACNNNNNNGTC 1 cut(s) 1884
EaeI YGGCCR 6 cut(s) 135, 232, 610, 889, 1989, 2031
EagI CGGCCG 1 cut(s) 610
Eam1104I CTCTTC 1 cut(s) 2190
EarI CTCTTC 1 cut(s) 2190
Ecl136II GAGCTC 3 cut(s) 646, 1405, 1844
EclXI CGGCCG 1 cut(s) 610
Eco130I CCWWGG 4 cut(s) 238, 1125, 1210, 2034
Eco147I AGGCCT 2 cut(s) 817, 2333
Eco24I GRGCYC 3 cut(s) 648, 1407, 1846
Eco47I GGWCC 5 cut(s) 439, 482, 1782, 1890, 2159
Eco52I CGGCCG 1 cut(s) 610
Eco53kI GAGCTC 3 cut(s) 646, 1405, 1844
Eco57I CTGAAG 2 cut(s) 608, 1810
Eco88I CYCGRG 2 cut(s) 260, 578
EcoICRI GAGCTC 3 cut(s) 646, 1405, 1844
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoO109I RGGNCCY 1 cut(s) 482
EcoRI GAATTC 1 cut(s) 2096
EcoRII CCWGG 1 cut(s) 1991
EcoT14I CCWWGG 4 cut(s) 238, 1125, 1210, 2034
EcoT22I ATGCAT 4 cut(s) 13, 1168, 1386, 1701
EcoT38I GRGCYC 3 cut(s) 648, 1407, 1846
ErhI CCWWGG 4 cut(s) 238, 1125, 1210, 2034
FaeI CATG 7 cut(s) 1129, 1444, 1476, 1699, 1703, 2038, 2114
FalI AAGNNNNNCTT 4 cut(s) 1139, 1171, 1831, 1863
FaqI GGGAC 7 cut(s) 111, 277, 425, 917, 1388, 1890, 2009
FatI CATG 7 cut(s) 1125, 1440, 1472, 1695, 1699, 2034, 2110
FauI CCCGC 1 cut(s) 211
FauNDI CATATG 2 cut(s) 1021, 1709
FbaI TGATCA 1 cut(s) 1452
FblI GTMKAC 2 cut(s) 223, 300
Fnu4HI GCNGC 2 cut(s) 1192, 1470
FokI GGATG 6 cut(s) 3, 673, 1255, 1409, 1723, 2090
FriOI GRGCYC 3 cut(s) 648, 1407, 1846
Fsp4HI GCNGC 2 cut(s) 1192, 1470
FspBI CTAG 1 cut(s) 1287
FspI TGCGCA 1 cut(s) 33
GlaI GCGC 2 cut(s) 33, 1331
GluI GCNGC 2 cut(s) 1192, 1470
GsaI CCCAGC 1 cut(s) 938
GsuI CTGGAG 1 cut(s) 647
HaeII RGCGCY 1 cut(s) 1333
HaeIII GGCC 9 cut(s) 137, 234, 612, 817, 891, 909, 1991, 2033, 2333
HapII CCGG 7 cut(s) 20, 420, 560, 613, 806, 1240, 2279
HgaI GACGC 1 cut(s) 290
HhaI GCGC 2 cut(s) 34, 1332
Hin1II CATG 7 cut(s) 1129, 1444, 1476, 1699, 1703, 2038, 2114
Hin6I GCGC 2 cut(s) 32, 1330
HinP1I GCGC 2 cut(s) 32, 1330
HincII GTYRAC 2 cut(s) 673, 2013
HindII GTYRAC 2 cut(s) 673, 2013
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 6 cut(s) 345, 1253, 1262, 1793, 1997, 2237
HpaI GTTAAC 2 cut(s) 673, 2013
HpaII CCGG 7 cut(s) 20, 420, 560, 613, 806, 1240, 2279
HphI GGTGA 7 cut(s) 145, 341, 409, 2129, 2161, 2232, 2304
Hpy166II GTNNAC 9 cut(s) 224, 301, 673, 724, 878, 1508, 1832, 1893, 2013
Hpy188I TCNGA 7 cut(s) 67, 117, 604, 1052, 1798, 2247, 2263
Hpy188III TCNNGA 7 cut(s) 262, 308, 578, 823, 867, 1347, 2279
Hpy8I GTNNAC 9 cut(s) 224, 301, 673, 724, 878, 1508, 1832, 1893, 2013
Hpy99I CGWCG 1 cut(s) 2005
HpyAV CCTTC 7 cut(s) 122, 584, 695, 1353, 1365, 2086, 2114
HpyCH4III ACNGT 5 cut(s) 305, 526, 1579, 2017, 2251
HpyCH4IV ACGT 3 cut(s) 57, 403, 434
HpyF10VI GCNNNNNNNGC 5 cut(s) 127, 240, 618, 935, 1031
HpyF3I CTNAG 4 cut(s) 195, 251, 2244, 2363
HpySE526I ACGT 3 cut(s) 57, 403, 434
Hsp92II CATG 7 cut(s) 1129, 1444, 1476, 1699, 1703, 2038, 2114
HspAI GCGC 2 cut(s) 32, 1330
Kpn2I TCCGGA 1 cut(s) 2278
Ksp22I TGATCA 1 cut(s) 1452
KspAI GTTAAC 2 cut(s) 673, 2013
Kzo9I GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
LmnI GCTCC 4 cut(s) 597, 1138, 1546, 1849
Lsp1109I GCAGC 2 cut(s) 1178, 1481
LweI GCATC 7 cut(s) 108, 1153, 1431, 1456, 2068, 2318, 2360
MaeI CTAG 1 cut(s) 1287
MaeII ACGT 3 cut(s) 57, 403, 434
MaeIII GTNAC 8 cut(s) 22, 151, 529, 743, 1012, 1276, 1297, 2238
MalI GATC 9 cut(s) 90, 413, 679, 955, 1049, 1062, 1341, 1454, 1872
MboI GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
MfeI CAATTG 1 cut(s) 44
MhlI GDGCHC 3 cut(s) 648, 1407, 1846
MlsI TGGCCA 3 cut(s) 137, 1991, 2033
MluNI TGGCCA 3 cut(s) 137, 1991, 2033
MlyI GAGTC 4 cut(s) 339, 1802, 1991, 2246
MmeI TCCRAC 2 cut(s) 258, 1776
Mox20I TGGCCA 3 cut(s) 137, 1991, 2033
Mph1103I ATGCAT 4 cut(s) 13, 1168, 1386, 1701
MroI TCCGGA 1 cut(s) 2278
MroXI GAANNNNTTC 3 cut(s) 874, 996, 2096
MscI TGGCCA 3 cut(s) 137, 1991, 2033
MslI CAYNNNNRTG 4 cut(s) 365, 1103, 1241, 2115
Msp20I TGGCCA 3 cut(s) 137, 1991, 2033
MspA1I CMGCKG 2 cut(s) 453, 938
MspCI CTTAAG 1 cut(s) 649
MspI CCGG 7 cut(s) 20, 420, 560, 613, 806, 1240, 2279
MspR9I CCNGG 3 cut(s) 806, 1240, 1993
MunI CAATTG 1 cut(s) 44
MvaI CCWGG 1 cut(s) 1993
MwoI GCNNNNNNNGC 5 cut(s) 127, 240, 618, 935, 1031
NciI CCSGG 2 cut(s) 806, 1240
NcoI CCATGG 2 cut(s) 1125, 2034
NdeI CATATG 2 cut(s) 1021, 1709
NdeII GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
NheI GCTAGC 1 cut(s) 1286
NlaIII CATG 7 cut(s) 1129, 1444, 1476, 1699, 1703, 2038, 2114
NlaIV GGNNCC 5 cut(s) 441, 1152, 1216, 1542, 1783
NmeAIII GCCGAG 1 cut(s) 210
NmuCI GTSAC 6 cut(s) 151, 529, 1012, 1276, 1297, 2238
NsbI TGCGCA 1 cut(s) 33
NsiI ATGCAT 4 cut(s) 13, 1168, 1386, 1701
NspI RCATGY 2 cut(s) 1444, 1476
NspV TTCGAA 1 cut(s) 990
PaeR7I CTCGAG 1 cut(s) 578
PceI AGGCCT 2 cut(s) 817, 2333
PcsI WCGNNNNNNNCGW 1 cut(s) 1362
PdmI GAANNNNTTC 3 cut(s) 874, 996, 2096
PfeI GAWTC 2 cut(s) 1253, 1262
PflMI CCANNNNNTGG 1 cut(s) 2029
PinAI ACCGGT 1 cut(s) 419
PkrI GCNGC 2 cut(s) 1193, 1471
PleI GAGTC 4 cut(s) 339, 1801, 1991, 2245
PpsI GAGTC 4 cut(s) 339, 1801, 1991, 2245
PpuMI RGGWCCY 1 cut(s) 482
PshBI ATTAAT 2 cut(s) 1497, 1526
Psp124BI GAGCTC 3 cut(s) 648, 1407, 1846
Psp5II RGGWCCY 1 cut(s) 482
Psp6I CCWGG 1 cut(s) 1991
PspFI CCCAGC 1 cut(s) 934
PspGI CCWGG 1 cut(s) 1991
PspN4I GGNNCC 5 cut(s) 441, 1152, 1216, 1542, 1783
PspPI GGNCC 6 cut(s) 439, 482, 908, 1782, 1890, 2159
PspPPI RGGWCCY 1 cut(s) 482
PsrI GAACNNNNNNTAC 4 cut(s) 306, 338, 1060, 1092
PstI CTGCAG 2 cut(s) 1196, 1450
PstNI CAGNNNCTG 1 cut(s) 485
PvuII CAGCTG 1 cut(s) 938
RsaI GTAC 6 cut(s) 60, 424, 723, 1229, 1509, 1833
RsaNI GTAC 6 cut(s) 59, 423, 722, 1228, 1508, 1832
RseI CAYNNNNRTG 4 cut(s) 365, 1103, 1241, 2115
SacI GAGCTC 3 cut(s) 648, 1407, 1846
SatI GCNGC 2 cut(s) 1192, 1470
Sau3AI GATC 9 cut(s) 88, 411, 677, 953, 1047, 1060, 1339, 1452, 1870
Sau96I GGNCC 6 cut(s) 439, 482, 908, 1782, 1890, 2159
SchI GAGTC 4 cut(s) 339, 1802, 1991, 2246
ScrFI CCNGG 3 cut(s) 806, 1240, 1993
SduI GDGCHC 3 cut(s) 648, 1407, 1846
SfaNI GCATC 7 cut(s) 108, 1153, 1431, 1456, 2068, 2318, 2360
SfcI CTRYAG 4 cut(s) 297, 1192, 1446, 1932
Sfr274I CTCGAG 1 cut(s) 578
SfuI TTCGAA 1 cut(s) 990
SinI GGWCC 5 cut(s) 439, 482, 1782, 1890, 2159
SlaI CTCGAG 1 cut(s) 578
SmiMI CAYNNNNRTG 4 cut(s) 365, 1103, 1241, 2115
SmlI CTYRAG 2 cut(s) 578, 649
SmoI CTYRAG 2 cut(s) 578, 649
SseBI AGGCCT 2 cut(s) 817, 2333
SsiI CCGC 5 cut(s) 218, 453, 477, 761, 2162
SspI AATATT 3 cut(s) 768, 1116, 2105
SspMI CTAG 1 cut(s) 1287
SstI GAGCTC 3 cut(s) 648, 1407, 1846
StuI AGGCCT 2 cut(s) 817, 2333
StyD4I CCNGG 3 cut(s) 804, 1238, 1991
StyI CCWWGG 4 cut(s) 238, 1125, 1210, 2034
TaaI ACNGT 5 cut(s) 305, 526, 1579, 2017, 2251
TaiI ACGT 3 cut(s) 60, 406, 437
TaqI TCGA 8 cut(s) 579, 990, 1046, 1521, 1762, 1836, 2000, 2322
TaqII GACCGA 1 cut(s) 1878
TatI WGTACW 3 cut(s) 721, 1507, 1831
TfiI GAWTC 2 cut(s) 1253, 1262
TscAI CASTG 3 cut(s) 41, 1455, 1834
TseFI GTSAC 6 cut(s) 151, 529, 1012, 1276, 1297, 2238
TseI GCWGC 2 cut(s) 1191, 1469
Tsp45I GTSAC 6 cut(s) 151, 529, 1012, 1276, 1297, 2238
TspDTI ATGAA 8 cut(s) 136, 176, 675, 714, 890, 1716, 1748, 2058
TspGWI ACGGA 4 cut(s) 281, 1125, 1843, 2326
TspRI CASTG 3 cut(s) 41, 1455, 1834
Van91I CCANNNNNTGG 1 cut(s) 2029
Vha464I CTTAAG 1 cut(s) 649
VpaK11BI GGWCC 5 cut(s) 439, 482, 1782, 1890, 2159
VspI ATTAAT 2 cut(s) 1497, 1526
XagI CCTNNNNNAGG 1 cut(s) 578
XapI RAATTY 4 cut(s) 971, 1410, 2096, 2273
XceI RCATGY 2 cut(s) 1444, 1476
XcmI CCANNNNNNNNNTGG 2 cut(s) 783, 850
XhoI CTCGAG 1 cut(s) 578
XmiI GTMKAC 2 cut(s) 223, 300
XmnI GAANNNNTTC 3 cut(s) 874, 996, 2096
XspI CTAG 1 cut(s) 1287
Zsp2I ATGCAT 4 cut(s) 13, 1168, 1386, 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.