TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 12 - 188 | 9.3e-56 | TIR domain |
| TIR_2 | PF13676 | 15 - 110 | 5.6e-16 | TIR domain |
| WHD_ROQ1 | PF23282 | 301 - 371 | 6.4e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 445 - 547 | 1.1e-12 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 468 - 554 | 1.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 552 - 618 | 1e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 611 - 696 | 1.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 617 - 690 | 3.4e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 766 - 838 | 4.8e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 624, 1161 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1084 |
| AciI | CCGC | 4 cut(s) | 625, 651, 1102, 2708 |
| AclWI | GGATC | 3 cut(s) | 134, 320, 2352 |
| AcoI | YGGCCR | 2 cut(s) | 2461, 2745 |
| AcsI | RAATTY | 6 cut(s) | 270, 463, 567, 861, 2413, 2756 |
| AcuI | CTGAAG | 4 cut(s) | 729, 1173, 2388, 2495 |
| AcyI | GRCGYC | 2 cut(s) | 621, 1158 |
| AdeI | CACNNNGTG | 1 cut(s) | 2917 |
| AfaI | GTAC | 8 cut(s) | 339, 780, 826, 1294, 1395, 1941, 2986, 3103 |
| AfeI | AGCGCT | 1 cut(s) | 1329 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1084, 2713 |
| AflIII | ACRYGT | 1 cut(s) | 1165 |
| AhlI | ACTAGT | 2 cut(s) | 881, 2534 |
| AjnI | CCWGG | 2 cut(s) | 1123, 2095 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 546, 578, 2741, 2773 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 999, 1031 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 17, 2504 |
| Alw26I | GTCTC | 2 cut(s) | 764, 1841 |
| AlwI | GGATC | 3 cut(s) | 134, 320, 2352 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2559 |
| Ama87I | CYCGRG | 1 cut(s) | 2712 |
| Aor51HI | AGCGCT | 1 cut(s) | 1329 |
| AoxI | GGCC | 4 cut(s) | 1681, 2461, 2745, 3064 |
| ApeKI | GCWGC | 3 cut(s) | 185, 304, 3089 |
| ApoI | RAATTY | 6 cut(s) | 270, 463, 567, 861, 2413, 2756 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2266, 2298 |
| AseI | ATTAAT | 2 cut(s) | 1635, 3051 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 689, 717, 917, 1551, 2484 |
| AspLEI | GCGC | 1 cut(s) | 1330 |
| AspS9I | GGNCC | 4 cut(s) | 1681, 2177, 2812, 2980 |
| AsuC2I | CCSGG | 1 cut(s) | 1106 |
| AsuHPI | GGTGA | 5 cut(s) | 12, 2111, 2149, 2220, 2828 |
| AsuII | TTCGAA | 1 cut(s) | 2530 |
| AvaI | CYCGRG | 1 cut(s) | 2712 |
| AvaII | GGWCC | 3 cut(s) | 2177, 2812, 2980 |
| BaeGI | GKGCMC | 1 cut(s) | 2166 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1923, 1956 |
| BanII | GRGCYC | 2 cut(s) | 17, 788 |
| BbsI | GAAGAC | 5 cut(s) | 1060, 1161, 1586, 1799, 2012 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 17, 2504 |
| BbvI | GCAGC | 3 cut(s) | 172, 291, 3101 |
| BccI | CCATC | 3 cut(s) | 99, 884, 2596 |
| BceAI | ACGGC | 1 cut(s) | 2760 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 977, 1011, 2283, 2317, 3068, 3102 |
| BciT130I | CCWGG | 2 cut(s) | 1125, 2097 |
| BciVI | GTATCC | 1 cut(s) | 61 |
| BcnI | CCSGG | 1 cut(s) | 1106 |
| BcoDI | GTCTC | 2 cut(s) | 764, 1841 |
| BcuI | ACTAGT | 2 cut(s) | 881, 2534 |
| BfaI | CTAG | 9 cut(s) | 560, 882, 896, 923, 1283, 2310, 2472, 2535, 3096 |
| BfoI | RGCGCY | 1 cut(s) | 1331 |
| BfuI | GTATCC | 1 cut(s) | 61 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1129 |
| BglII | AGATCT | 5 cut(s) | 805, 1028, 1582, 1843, 2056 |
| BisI | GCNGC | 3 cut(s) | 186, 305, 3090 |
| BlsI | GCNGC | 3 cut(s) | 187, 306, 3091 |
| BmcAI | AGTACT | 2 cut(s) | 780, 3103 |
| Bme1390I | CCNGG | 3 cut(s) | 1106, 1125, 2097 |
| Bme18I | GGWCC | 3 cut(s) | 2177, 2812, 2980 |
| BmeT110I | CYCGRG | 1 cut(s) | 2712 |
| BmgT120I | GGNCC | 4 cut(s) | 1681, 2177, 2812, 2980 |
| BmiI | GGNNCC | 1 cut(s) | 2981 |
| BmrFI | CCNGG | 3 cut(s) | 1106, 1125, 2097 |
| BmrI | ACTGGG | 2 cut(s) | 791, 2376 |
| BmuI | ACTGGG | 2 cut(s) | 791, 2376 |
| BpiI | GAAGAC | 5 cut(s) | 1060, 1161, 1586, 1799, 2012 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| Bpu14I | TTCGAA | 1 cut(s) | 2530 |
| BpuEI | CTTGAG | 4 cut(s) | 559, 1289, 2014, 2153 |
| BpuMI | CCSGG | 1 cut(s) | 1106 |
| BsaAI | YACGTR | 1 cut(s) | 1397 |
| BsaBI | GATNNNNATC | 3 cut(s) | 324, 1848, 2061 |
| BsaHI | GRCGYC | 2 cut(s) | 621, 1158 |
| BsaI | GGTCTC | 1 cut(s) | 764 |
| BsaJI | CCNNGG | 3 cut(s) | 26, 1315, 2711 |
| BsaWI | WCCGGW | 1 cut(s) | 2318 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1084, 2713 |
| Bse1I | ACTGG | 5 cut(s) | 587, 786, 1513, 2346, 2382 |
| Bse3DI | GCAATG | 1 cut(s) | 2516 |
| Bse8I | GATNNNNATC | 3 cut(s) | 324, 1848, 2061 |
| BseBI | CCWGG | 2 cut(s) | 1125, 2097 |
| BseDI | CCNNGG | 3 cut(s) | 26, 1315, 2711 |
| BseJI | GATNNNNATC | 3 cut(s) | 324, 1848, 2061 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1084, 2713 |
| BseMI | GCAATG | 1 cut(s) | 2516 |
| BseMII | CTCAG | 2 cut(s) | 1228, 2442 |
| BseNI | ACTGG | 5 cut(s) | 587, 786, 1513, 2346, 2382 |
| BseRI | GAGGAG | 5 cut(s) | 15, 1502, 2684, 2951, 3023 |
| BseSI | GKGCMC | 1 cut(s) | 2166 |
| BseXI | GCAGC | 3 cut(s) | 172, 291, 3101 |
| BshFI | GGCC | 4 cut(s) | 1683, 2463, 2747, 3066 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 17, 2504 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2712 |
| BsiSI | CCGG | 4 cut(s) | 1105, 2291, 2319, 2522 |
| BsiWI | CGTACG | 1 cut(s) | 2984 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1084, 2713 |
| BsmAI | GTCTC | 2 cut(s) | 764, 1841 |
| BsmI | GAATGC | 5 cut(s) | 284, 689, 1545, 2286, 2326 |
| BsnI | GGCC | 4 cut(s) | 1683, 2463, 2747, 3066 |
| Bso31I | GGTCTC | 1 cut(s) | 764 |
| BsoBI | CYCGRG | 1 cut(s) | 2712 |
| Bsp119I | TTCGAA | 1 cut(s) | 2530 |
| Bsp1286I | GDGCHC | 5 cut(s) | 8, 17, 788, 2166, 2504 |
| Bsp1407I | TGTACA | 1 cut(s) | 1292 |
| Bsp19I | CCATGG | 1 cut(s) | 1315 |
| BspACI | CCGC | 4 cut(s) | 625, 651, 1102, 2708 |
| BspANI | GGCC | 4 cut(s) | 1683, 2463, 2747, 3066 |
| BspCNI | CTCAG | 2 cut(s) | 1227, 2443 |
| BspHI | TCATGA | 1 cut(s) | 379 |
| BspLI | GGNNCC | 1 cut(s) | 2981 |
| BspPI | GGATC | 3 cut(s) | 134, 320, 2352 |
| BspQI | GCTCTTC | 1 cut(s) | 22 |
| BspT104I | TTCGAA | 1 cut(s) | 2530 |
| BspTNI | GGTCTC | 1 cut(s) | 764 |
| BsrDI | GCAATG | 1 cut(s) | 2516 |
| BsrGI | TGTACA | 1 cut(s) | 1292 |
| BsrI | ACTGG | 5 cut(s) | 587, 786, 1513, 2346, 2382 |
| BssECI | CCNNGG | 3 cut(s) | 26, 1315, 2711 |
| BssNI | GRCGYC | 2 cut(s) | 621, 1158 |
| BssT1I | CCWWGG | 1 cut(s) | 1315 |
| Bst2UI | CCWGG | 2 cut(s) | 1125, 2097 |
| Bst6I | CTCTTC | 4 cut(s) | 22, 838, 900, 3120 |
| BstACI | GRCGYC | 2 cut(s) | 621, 1158 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 182, 1072, 3113 |
| BstAUI | TGTACA | 1 cut(s) | 1292 |
| BstBAI | YACGTR | 1 cut(s) | 1397 |
| BstBI | TTCGAA | 1 cut(s) | 2530 |
| BstC8I | GCNNGC | 6 cut(s) | 1130, 1754, 1967, 2465, 2724, 2738 |
| BstDEI | CTNAG | 5 cut(s) | 809, 1214, 2348, 2451, 2777 |
| BstDSI | CCRYGG | 1 cut(s) | 1315 |
| BstEII | GGTNACC | 1 cut(s) | 701 |
| BstH2I | RGCGCY | 1 cut(s) | 1331 |
| BstHHI | GCGC | 1 cut(s) | 1330 |
| BstMAI | GTCTC | 2 cut(s) | 764, 1841 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 12, 182, 1072, 1129, 1749, 1962, 2728, 2737, 3113 |
| BstNI | CCWGG | 2 cut(s) | 1125, 2097 |
| BstNSI | RCATGY | 3 cut(s) | 1169, 1756, 1969 |
| BstPI | GGTNACC | 1 cut(s) | 701 |
| BstSCI | CCNGG | 3 cut(s) | 1104, 1123, 2095 |
| BstSLI | GKGCMC | 1 cut(s) | 2166 |
| BstV1I | GCAGC | 3 cut(s) | 172, 291, 3101 |
| BstV2I | GAAGAC | 5 cut(s) | 1060, 1161, 1586, 1799, 2012 |
| BstX2I | RGATCY | 6 cut(s) | 805, 1028, 1582, 1843, 2056, 2344 |
| BstYI | RGATCY | 6 cut(s) | 805, 1028, 1582, 1843, 2056, 2344 |
| BsuI | GTATCC | 1 cut(s) | 61 |
| BsuRI | GGCC | 4 cut(s) | 1683, 2463, 2747, 3066 |
| BtgI | CCRYGG | 1 cut(s) | 1315 |
| BtgZI | GCGATG | 1 cut(s) | 1002 |
| BtsI | GCAGTG | 4 cut(s) | 99, 1822, 2035, 2776 |
| BtsIMutI | CAGTG | 6 cut(s) | 99, 1506, 1822, 2035, 2389, 2776 |
| Cac8I | GCNNGC | 6 cut(s) | 1130, 1754, 1967, 2465, 2724, 2738 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2559 |
| CciI | TCATGA | 1 cut(s) | 379 |
| CfoI | GCGC | 1 cut(s) | 1330 |
| Cfr13I | GGNCC | 4 cut(s) | 1681, 2177, 2812, 2980 |
| Csp6I | GTAC | 8 cut(s) | 338, 779, 825, 1293, 1394, 1940, 2985, 3102 |
| CviQI | GTAC | 8 cut(s) | 338, 779, 825, 1293, 1394, 1940, 2985, 3102 |
| DdeI | CTNAG | 5 cut(s) | 809, 1214, 2348, 2451, 2777 |
| DraI | TTTAAA | 4 cut(s) | 1911, 2860, 2905, 3157 |
| DraIII | CACNNNGTG | 1 cut(s) | 2917 |
| EaeI | YGGCCR | 2 cut(s) | 2461, 2745 |
| Eam1104I | CTCTTC | 4 cut(s) | 22, 838, 900, 3120 |
| EarI | CTCTTC | 4 cut(s) | 22, 838, 900, 3120 |
| EciI | GGCGGA | 1 cut(s) | 1091 |
| Ecl136II | GAGCTC | 1 cut(s) | 15 |
| Eco130I | CCWWGG | 1 cut(s) | 1315 |
| Eco147I | AGGCCT | 1 cut(s) | 3066 |
| Eco24I | GRGCYC | 2 cut(s) | 17, 788 |
| Eco31I | GGTCTC | 1 cut(s) | 764 |
| Eco32I | GATATC | 1 cut(s) | 2878 |
| Eco47I | GGWCC | 3 cut(s) | 2177, 2812, 2980 |
| Eco47III | AGCGCT | 1 cut(s) | 1329 |
| Eco53kI | GAGCTC | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 4 cut(s) | 729, 1173, 2388, 2495 |
| Eco88I | CYCGRG | 1 cut(s) | 2712 |
| Eco91I | GGTNACC | 1 cut(s) | 701 |
| EcoICRI | GAGCTC | 1 cut(s) | 15 |
| EcoO65I | GGTNACC | 1 cut(s) | 701 |
| EcoRI | GAATTC | 2 cut(s) | 270, 463 |
| EcoRII | CCWGG | 2 cut(s) | 1123, 2095 |
| EcoRV | GATATC | 1 cut(s) | 2878 |
| EcoT14I | CCWWGG | 1 cut(s) | 1315 |
| EcoT22I | ATGCAT | 2 cut(s) | 238, 284 |
| EcoT38I | GRGCYC | 2 cut(s) | 17, 788 |
| ErhI | CCWWGG | 1 cut(s) | 1315 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 705, 737 |
| FauI | CCCGC | 2 cut(s) | 644, 2715 |
| Fnu4HI | GCNGC | 3 cut(s) | 186, 305, 3090 |
| FriOI | GRGCYC | 2 cut(s) | 17, 788 |
| Fsp4HI | GCNGC | 3 cut(s) | 186, 305, 3090 |
| FspBI | CTAG | 9 cut(s) | 560, 882, 896, 923, 1283, 2310, 2472, 2535, 3096 |
| GlaI | GCGC | 1 cut(s) | 1329 |
| GluI | GCNGC | 3 cut(s) | 186, 305, 3090 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HaeII | RGCGCY | 1 cut(s) | 1331 |
| HaeIII | GGCC | 4 cut(s) | 1683, 2463, 2747, 3066 |
| HapII | CCGG | 4 cut(s) | 1105, 2291, 2319, 2522 |
| HhaI | GCGC | 1 cut(s) | 1330 |
| Hin1I | GRCGYC | 2 cut(s) | 621, 1158 |
| Hin6I | GCGC | 1 cut(s) | 1328 |
| HinP1I | GCGC | 1 cut(s) | 1328 |
| HincII | GTYRAC | 5 cut(s) | 243, 1237, 2409, 2611, 2801 |
| HindII | GTYRAC | 5 cut(s) | 243, 1237, 2409, 2611, 2801 |
| HindIII | AAGCTT | 6 cut(s) | 1442, 1655, 1868, 2081, 2129, 2507 |
| HpaI | GTTAAC | 2 cut(s) | 2409, 2611 |
| HpaII | CCGG | 4 cut(s) | 1105, 2291, 2319, 2522 |
| HphI | GGTGA | 5 cut(s) | 12, 2111, 2149, 2220, 2828 |
| Hpy166II | GTNNAC | 8 cut(s) | 243, 1237, 1394, 2409, 2548, 2611, 2649, 2801 |
| Hpy188I | TCNGA | 4 cut(s) | 334, 2368, 2514, 2854 |
| Hpy8I | GTNNAC | 8 cut(s) | 243, 1237, 1394, 2409, 2548, 2611, 2649, 2801 |
| HpyAV | CCTTC | 6 cut(s) | 339, 411, 1280, 1967, 2936, 3077 |
| HpyCH4IV | ACGT | 4 cut(s) | 606, 621, 1158, 1396 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 12, 182, 1072, 1129, 1749, 1962, 2728, 2737, 3113 |
| HpyF3I | CTNAG | 5 cut(s) | 809, 1214, 2348, 2451, 2777 |
| HpySE526I | ACGT | 4 cut(s) | 606, 621, 1158, 1396 |
| Hsp92I | GRCGYC | 2 cut(s) | 621, 1158 |
| HspAI | GCGC | 1 cut(s) | 1328 |
| KspAI | GTTAAC | 2 cut(s) | 2409, 2611 |
| LguI | GCTCTTC | 1 cut(s) | 22 |
| LmnI | GCTCC | 6 cut(s) | 1080, 1489, 2507, 2524, 2923, 3010 |
| Lsp1109I | GCAGC | 3 cut(s) | 172, 291, 3101 |
| MaeI | CTAG | 9 cut(s) | 560, 882, 896, 923, 1283, 2310, 2472, 2535, 3096 |
| MaeII | ACGT | 4 cut(s) | 606, 621, 1158, 1396 |
| MaeIII | GTNAC | 5 cut(s) | 701, 851, 964, 2226, 2351 |
| MfeI | CAATTG | 3 cut(s) | 189, 1746, 3108 |
| MflI | RGATCY | 6 cut(s) | 805, 1028, 1582, 1843, 2056, 2344 |
| MhlI | GDGCHC | 5 cut(s) | 8, 17, 788, 2166, 2504 |
| MlyI | GAGTC | 2 cut(s) | 2685, 3172 |
| MmeI | TCCRAC | 6 cut(s) | 544, 2191, 2422, 2790, 2877, 2901 |
| Mph1103I | ATGCAT | 2 cut(s) | 238, 284 |
| MroXI | GAANNNNTTC | 5 cut(s) | 689, 717, 917, 1551, 2484 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1500, 2841, 3078 |
| MspA1I | CMGCKG | 1 cut(s) | 681 |
| MspI | CCGG | 4 cut(s) | 1105, 2291, 2319, 2522 |
| MspR9I | CCNGG | 3 cut(s) | 1106, 1125, 2097 |
| MunI | CAATTG | 3 cut(s) | 189, 1746, 3108 |
| Mva1269I | GAATGC | 5 cut(s) | 284, 689, 1545, 2286, 2326 |
| MvaI | CCWGG | 2 cut(s) | 1125, 2097 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 12, 182, 1072, 1129, 1749, 1962, 2728, 2737, 3113 |
| NciI | CCSGG | 1 cut(s) | 1106 |
| NcoI | CCATGG | 1 cut(s) | 1315 |
| NlaIV | GGNNCC | 1 cut(s) | 2981 |
| NmuCI | GTSAC | 2 cut(s) | 2226, 2351 |
| NsiI | ATGCAT | 2 cut(s) | 238, 284 |
| NspI | RCATGY | 3 cut(s) | 1169, 1756, 1969 |
| NspV | TTCGAA | 1 cut(s) | 2530 |
| PaeI | GCATGC | 2 cut(s) | 1756, 1969 |
| PagI | TCATGA | 1 cut(s) | 379 |
| PceI | AGGCCT | 1 cut(s) | 3066 |
| PciI | ACATGT | 1 cut(s) | 1165 |
| PciSI | GCTCTTC | 1 cut(s) | 22 |
| PctI | GAATGC | 5 cut(s) | 284, 689, 1545, 2286, 2326 |
| PdmI | GAANNNNTTC | 5 cut(s) | 689, 717, 917, 1551, 2484 |
| PfeI | GAWTC | 8 cut(s) | 120, 197, 1109, 1228, 1369, 2372, 2495, 2667 |
| Pfl23II | CGTACG | 1 cut(s) | 2984 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1084 |
| PkrI | GCNGC | 3 cut(s) | 187, 306, 3091 |
| PleI | GAGTC | 2 cut(s) | 2685, 3171 |
| PpsI | GAGTC | 2 cut(s) | 2685, 3171 |
| Ppu21I | YACGTR | 1 cut(s) | 1397 |
| PscI | ACATGT | 1 cut(s) | 1165 |
| PshBI | ATTAAT | 2 cut(s) | 1635, 3051 |
| Psp124BI | GAGCTC | 1 cut(s) | 17 |
| Psp6I | CCWGG | 2 cut(s) | 1123, 2095 |
| PspEI | GGTNACC | 1 cut(s) | 701 |
| PspGI | CCWGG | 2 cut(s) | 1123, 2095 |
| PspLI | CGTACG | 1 cut(s) | 2984 |
| PspN4I | GGNNCC | 1 cut(s) | 2981 |
| PspPI | GGNCC | 4 cut(s) | 1681, 2177, 2812, 2980 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2559 |
| PsuI | RGATCY | 6 cut(s) | 805, 1028, 1582, 1843, 2056, 2344 |
| PvuII | CAGCTG | 1 cut(s) | 681 |
| RsaI | GTAC | 8 cut(s) | 339, 780, 826, 1294, 1395, 1941, 2986, 3103 |
| RsaNI | GTAC | 8 cut(s) | 338, 779, 825, 1293, 1394, 1940, 2985, 3102 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1500, 2841, 3078 |
| SacI | GAGCTC | 1 cut(s) | 17 |
| SapI | GCTCTTC | 1 cut(s) | 22 |
| SatI | GCNGC | 3 cut(s) | 186, 305, 3090 |
| Sau96I | GGNCC | 4 cut(s) | 1681, 2177, 2812, 2980 |
| ScaI | AGTACT | 2 cut(s) | 780, 3103 |
| SchI | GAGTC | 2 cut(s) | 2685, 3172 |
| ScrFI | CCNGG | 3 cut(s) | 1106, 1125, 2097 |
| SduI | GDGCHC | 5 cut(s) | 8, 17, 788, 2166, 2504 |
| SfuI | TTCGAA | 1 cut(s) | 2530 |
| SinI | GGWCC | 3 cut(s) | 2177, 2812, 2980 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1500, 2841, 3078 |
| SmlI | CTYRAG | 4 cut(s) | 574, 1268, 1993, 2132 |
| SmoI | CTYRAG | 4 cut(s) | 574, 1268, 1993, 2132 |
| SpeI | ACTAGT | 2 cut(s) | 881, 2534 |
| SphI | GCATGC | 2 cut(s) | 1756, 1969 |
| SseBI | AGGCCT | 1 cut(s) | 3066 |
| SsiI | CCGC | 4 cut(s) | 625, 651, 1102, 2708 |
| SspI | AATATT | 2 cut(s) | 918, 1639 |
| SspMI | CTAG | 9 cut(s) | 560, 882, 896, 923, 1283, 2310, 2472, 2535, 3096 |
| SstI | GAGCTC | 1 cut(s) | 17 |
| StuI | AGGCCT | 1 cut(s) | 3066 |
| StyD4I | CCNGG | 3 cut(s) | 1104, 1123, 2095 |
| StyI | CCWWGG | 1 cut(s) | 1315 |
| TaiI | ACGT | 4 cut(s) | 609, 624, 1161, 1399 |
| TaqI | TCGA | 6 cut(s) | 73, 961, 1090, 1839, 2530, 3166 |
| TatI | WGTACW | 4 cut(s) | 778, 824, 1292, 3101 |
| TfiI | GAWTC | 8 cut(s) | 120, 197, 1109, 1228, 1369, 2372, 2495, 2667 |
| TscAI | CASTG | 6 cut(s) | 106, 1513, 1822, 2035, 2389, 2776 |
| TseFI | GTSAC | 2 cut(s) | 2226, 2351 |
| TseI | GCWGC | 3 cut(s) | 185, 304, 3089 |
| Tsp45I | GTSAC | 2 cut(s) | 2226, 2351 |
| TspGWI | ACGGA | 1 cut(s) | 2972 |
| TspRI | CASTG | 6 cut(s) | 106, 1513, 1822, 2035, 2389, 2776 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1084 |
| VpaK11BI | GGWCC | 3 cut(s) | 2177, 2812, 2980 |
| VspI | ATTAAT | 2 cut(s) | 1635, 3051 |
| XapI | RAATTY | 6 cut(s) | 270, 463, 567, 861, 2413, 2756 |
| XbaI | TCTAGA | 3 cut(s) | 895, 1282, 2471 |
| XceI | RCATGY | 3 cut(s) | 1169, 1756, 1969 |
| XmnI | GAANNNNTTC | 5 cut(s) | 689, 717, 917, 1551, 2484 |
| XspI | CTAG | 9 cut(s) | 560, 882, 896, 923, 1283, 2310, 2472, 2535, 3096 |
| ZraI | GACGTC | 2 cut(s) | 622, 1159 |
| ZrmI | AGTACT | 2 cut(s) | 780, 3103 |
| Zsp2I | ATGCAT | 2 cut(s) | 238, 284 |