TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 123 - 264 | 2e-10 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 95, 536 |
| AcsI | RAATTY | 3 cut(s) | 350, 378, 633 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 326, 525 |
| AgsI | TTSAA | 7 cut(s) | 75, 97, 116, 181, 512, 709, 793 |
| AjnI | CCWGG | 1 cut(s) | 367 |
| AluBI | AGCT | 4 cut(s) | 79, 430, 717, 767 |
| AluI | AGCT | 4 cut(s) | 79, 430, 717, 767 |
| Alw21I | GWGCWC | 2 cut(s) | 210, 769 |
| Alw44I | GTGCAC | 1 cut(s) | 206 |
| AlwI | GGATC | 2 cut(s) | 95, 536 |
| Ama87I | CYCGRG | 1 cut(s) | 383 |
| ApaLI | GTGCAC | 1 cut(s) | 206 |
| ApoI | RAATTY | 3 cut(s) | 350, 378, 633 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 633 |
| AspLEI | GCGC | 1 cut(s) | 476 |
| AsuHPI | GGTGA | 2 cut(s) | 422, 763 |
| AvaI | CYCGRG | 1 cut(s) | 383 |
| BaeGI | GKGCMC | 1 cut(s) | 210 |
| BanII | GRGCYC | 1 cut(s) | 769 |
| BauI | CACGAG | 1 cut(s) | 624 |
| Bbv12I | GWGCWC | 2 cut(s) | 210, 769 |
| BccI | CCATC | 6 cut(s) | 13, 142, 205, 284, 447, 451 |
| BciT130I | CCWGG | 1 cut(s) | 369 |
| BfaI | CTAG | 1 cut(s) | 11 |
| BfmI | CTRYAG | 1 cut(s) | 718 |
| Bme1390I | CCNGG | 1 cut(s) | 369 |
| BmeT110I | CYCGRG | 1 cut(s) | 383 |
| BmrFI | CCNGG | 1 cut(s) | 369 |
| BmrI | ACTGGG | 1 cut(s) | 206 |
| BmuI | ACTGGG | 1 cut(s) | 206 |
| BpmI | CTGGAG | 1 cut(s) | 420 |
| Bpu10I | CCTNAGC | 1 cut(s) | 324 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 349, 379 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 326, 525 |
| Bse1I | ACTGG | 2 cut(s) | 212, 571 |
| Bse3DI | GCAATG | 1 cut(s) | 265 |
| BseBI | CCWGG | 1 cut(s) | 369 |
| BseGI | GGATG | 1 cut(s) | 462 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 326, 525 |
| BseMI | GCAATG | 1 cut(s) | 265 |
| BseMII | CTCAG | 1 cut(s) | 338 |
| BseNI | ACTGG | 2 cut(s) | 212, 571 |
| BseSI | GKGCMC | 1 cut(s) | 210 |
| BsiHKAI | GWGCWC | 2 cut(s) | 210, 769 |
| BsiHKCI | CYCGRG | 1 cut(s) | 383 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 326, 525 |
| BsoBI | CYCGRG | 1 cut(s) | 383 |
| Bsp1286I | GDGCHC | 2 cut(s) | 210, 769 |
| Bsp143I | GATC | 3 cut(s) | 87, 487, 528 |
| BspCNI | CTCAG | 1 cut(s) | 337 |
| BspHI | TCATGA | 1 cut(s) | 591 |
| BspPI | GGATC | 2 cut(s) | 95, 536 |
| BsrDI | GCAATG | 1 cut(s) | 265 |
| BsrI | ACTGG | 2 cut(s) | 212, 571 |
| BssMI | GATC | 3 cut(s) | 87, 487, 528 |
| BssSI | CACGAG | 1 cut(s) | 624 |
| Bst2BI | CACGAG | 1 cut(s) | 624 |
| Bst2UI | CCWGG | 1 cut(s) | 369 |
| Bst4CI | ACNGT | 4 cut(s) | 101, 361, 662, 810 |
| BstC8I | GCNNGC | 4 cut(s) | 58, 321, 715, 782 |
| BstDEI | CTNAG | 2 cut(s) | 26, 324 |
| BstF5I | GGATG | 1 cut(s) | 462 |
| BstHHI | GCGC | 1 cut(s) | 476 |
| BstKTI | GATC | 3 cut(s) | 90, 490, 531 |
| BstMBI | GATC | 3 cut(s) | 87, 487, 528 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 473, 482 |
| BstNI | CCWGG | 1 cut(s) | 369 |
| BstSCI | CCNGG | 1 cut(s) | 367 |
| BstSFI | CTRYAG | 1 cut(s) | 718 |
| BstSLI | GKGCMC | 1 cut(s) | 210 |
| BtsCI | GGATG | 1 cut(s) | 462 |
| BtsIMutI | CAGTG | 1 cut(s) | 564 |
| Cac8I | GCNNGC | 4 cut(s) | 58, 321, 715, 782 |
| CciI | TCATGA | 1 cut(s) | 591 |
| CfoI | GCGC | 1 cut(s) | 476 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 676, 711 |
| CviAII | CATG | 3 cut(s) | 444, 592, 672 |
| DdeI | CTNAG | 2 cut(s) | 26, 324 |
| DpnI | GATC | 3 cut(s) | 89, 489, 530 |
| DpnII | GATC | 3 cut(s) | 87, 487, 528 |
| Ecl136II | GAGCTC | 1 cut(s) | 767 |
| Eco24I | GRGCYC | 1 cut(s) | 769 |
| Eco53kI | GAGCTC | 1 cut(s) | 767 |
| Eco88I | CYCGRG | 1 cut(s) | 383 |
| EcoICRI | GAGCTC | 1 cut(s) | 767 |
| EcoRII | CCWGG | 1 cut(s) | 367 |
| EcoT38I | GRGCYC | 1 cut(s) | 769 |
| FaeI | CATG | 3 cut(s) | 447, 595, 675 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 588, 620 |
| FatI | CATG | 3 cut(s) | 443, 591, 671 |
| FokI | GGATG | 1 cut(s) | 469 |
| FriOI | GRGCYC | 1 cut(s) | 769 |
| FspBI | CTAG | 1 cut(s) | 11 |
| GlaI | GCGC | 1 cut(s) | 475 |
| GsuI | CTGGAG | 1 cut(s) | 420 |
| HhaI | GCGC | 1 cut(s) | 476 |
| Hin1II | CATG | 3 cut(s) | 447, 595, 675 |
| Hin6I | GCGC | 1 cut(s) | 474 |
| HinP1I | GCGC | 1 cut(s) | 474 |
| HincII | GTYRAC | 2 cut(s) | 271, 678 |
| HindII | GTYRAC | 2 cut(s) | 271, 678 |
| HindIII | AAGCTT | 1 cut(s) | 77 |
| HinfI | GANTC | 4 cut(s) | 173, 330, 413, 440 |
| HpaI | GTTAAC | 1 cut(s) | 678 |
| HphI | GGTGA | 2 cut(s) | 422, 763 |
| Hpy166II | GTNNAC | 3 cut(s) | 208, 271, 678 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 5 cut(s) | 11, 437, 509, 592, 626 |
| Hpy8I | GTNNAC | 3 cut(s) | 208, 271, 678 |
| HpyAV | CCTTC | 3 cut(s) | 59, 272, 727 |
| HpyCH4III | ACNGT | 4 cut(s) | 101, 361, 662, 810 |
| HpyCH4IV | ACGT | 1 cut(s) | 644 |
| HpyCH4V | TGCA | 5 cut(s) | 56, 105, 208, 231, 258 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 473, 482 |
| HpyF3I | CTNAG | 2 cut(s) | 26, 324 |
| HpySE526I | ACGT | 1 cut(s) | 644 |
| Hsp92II | CATG | 3 cut(s) | 447, 595, 675 |
| HspAI | GCGC | 1 cut(s) | 474 |
| KspAI | GTTAAC | 1 cut(s) | 678 |
| Kzo9I | GATC | 3 cut(s) | 87, 487, 528 |
| LmnI | GCTCC | 2 cut(s) | 427, 764 |
| MaeI | CTAG | 1 cut(s) | 11 |
| MaeII | ACGT | 1 cut(s) | 644 |
| MaeIII | GTNAC | 6 cut(s) | 43, 147, 361, 478, 557, 662 |
| MalI | GATC | 3 cut(s) | 89, 489, 530 |
| MboI | GATC | 3 cut(s) | 87, 487, 528 |
| MboII | GAAGA | 3 cut(s) | 641, 735, 766 |
| MfeI | CAATTG | 1 cut(s) | 119 |
| MhlI | GDGCHC | 2 cut(s) | 210, 769 |
| MnlI | CCTC | 3 cut(s) | 444, 633, 742 |
| MroXI | GAANNNNTTC | 1 cut(s) | 633 |
| MseI | TTAA | 5 cut(s) | 252, 302, 308, 354, 677 |
| MspR9I | CCNGG | 1 cut(s) | 369 |
| MunI | CAATTG | 1 cut(s) | 119 |
| MvaI | CCWGG | 1 cut(s) | 369 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 473, 482 |
| NdeII | GATC | 3 cut(s) | 87, 487, 528 |
| NlaIII | CATG | 3 cut(s) | 447, 595, 675 |
| NmuCI | GTSAC | 1 cut(s) | 662 |
| PagI | TCATGA | 1 cut(s) | 591 |
| PdmI | GAANNNNTTC | 1 cut(s) | 633 |
| PfeI | GAWTC | 4 cut(s) | 173, 330, 413, 440 |
| PfoI | TCCNGGA | 1 cut(s) | 367 |
| Psp124BI | GAGCTC | 1 cut(s) | 769 |
| Psp6I | CCWGG | 1 cut(s) | 367 |
| PspGI | CCWGG | 1 cut(s) | 367 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 789 |
| SacI | GAGCTC | 1 cut(s) | 769 |
| SaqAI | TTAA | 5 cut(s) | 252, 302, 308, 354, 677 |
| Sau3AI | GATC | 3 cut(s) | 87, 487, 528 |
| ScrFI | CCNGG | 1 cut(s) | 369 |
| SduI | GDGCHC | 2 cut(s) | 210, 769 |
| SetI | ASST | 9 cut(s) | 81, 207, 432, 436, 606, 647, 719, 753, 769 |
| SfcI | CTRYAG | 1 cut(s) | 718 |
| SspI | AATATT | 1 cut(s) | 306 |
| SspMI | CTAG | 1 cut(s) | 11 |
| SstI | GAGCTC | 1 cut(s) | 769 |
| StyD4I | CCNGG | 1 cut(s) | 367 |
| TaaI | ACNGT | 4 cut(s) | 101, 361, 662, 810 |
| TaiI | ACGT | 1 cut(s) | 647 |
| TaqI | TCGA | 2 cut(s) | 90, 531 |
| TfiI | GAWTC | 4 cut(s) | 173, 330, 413, 440 |
| Tru1I | TTAA | 5 cut(s) | 252, 302, 308, 354, 677 |
| Tru9I | TTAA | 5 cut(s) | 252, 302, 308, 354, 677 |
| TscAI | CASTG | 1 cut(s) | 571 |
| TseFI | GTSAC | 1 cut(s) | 662 |
| Tsp45I | GTSAC | 1 cut(s) | 662 |
| TspDTI | ATGAA | 8 cut(s) | 291, 432, 580, 588, 608, 639, 693, 810 |
| TspRI | CASTG | 1 cut(s) | 571 |
| VneI | GTGCAC | 1 cut(s) | 206 |
| XapI | RAATTY | 3 cut(s) | 350, 378, 633 |
| XbaI | TCTAGA | 1 cut(s) | 10 |
| XmnI | GAANNNNTTC | 1 cut(s) | 633 |
| XspI | CTAG | 1 cut(s) | 11 |