TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 192 | 2.7e-50 | TIR domain |
| TIR_2 | PF13676 | 16 - 111 | 2.1e-14 | TIR domain |
| NB-ARC | PF00931 | 199 - 365 | 5.3e-23 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 433 - 504 | 8.6e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 799 - 866 | 8e-10 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 831 - 868 | 1e-06 | Leucine rich repeat |
| LRR_4 | PF12799 | 834 - 870 | 4.7e-07 | Leucine Rich repeats (2 copies) |
| LRR_14 | PF23598 | 854 - 913 | 1.3e-08 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 879 - 916 | 5.6e-06 | Leucine rich repeat |
| C-JID | PF20160 | 1043 - 1193 | 4.1e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 843 |
| Acc36I | ACCTGC | 1 cut(s) | 2991 |
| AccBSI | CCGCTC | 2 cut(s) | 2227, 3202 |
| AccI | GTMKAC | 1 cut(s) | 1777 |
| AccII | CGCG | 1 cut(s) | 118 |
| AclI | AACGTT | 1 cut(s) | 997 |
| AclWI | GGATC | 4 cut(s) | 323, 336, 918, 1594 |
| AcuI | CTGAAG | 6 cut(s) | 1256, 1671, 2450, 2594, 3013, 3074 |
| AfaI | GTAC | 7 cut(s) | 41, 342, 1193, 1969, 2579, 2953, 3307 |
| AfeI | AGCGCT | 1 cut(s) | 1862 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 567, 2065, 3362, 3415, 3459 |
| AflII | CTTAAG | 1 cut(s) | 1435 |
| AflIII | ACRYGT | 1 cut(s) | 1455 |
| AjnI | CCWGG | 2 cut(s) | 1522, 2271 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2362, 2394, 3425, 3457 |
| Alw21I | GWGCWC | 4 cut(s) | 183, 537, 761, 1225 |
| Alw26I | GTCTC | 2 cut(s) | 2060, 2252 |
| Alw44I | GTGCAC | 2 cut(s) | 533, 1221 |
| AlwI | GGATC | 4 cut(s) | 323, 336, 918, 1594 |
| Ama87I | CYCGRG | 3 cut(s) | 6, 1943, 2477 |
| Aor51HI | AGCGCT | 1 cut(s) | 1862 |
| AoxI | GGCC | 2 cut(s) | 3, 1714 |
| ApaI | GGGCCC | 1 cut(s) | 1718 |
| ApaLI | GTGCAC | 2 cut(s) | 533, 1221 |
| ApeKI | GCWGC | 5 cut(s) | 729, 790, 1822, 2106, 3395 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 583, 1133, 2153 |
| AspLEI | GCGC | 4 cut(s) | 118, 1397, 1863, 3242 |
| AspS9I | GGNCC | 4 cut(s) | 4, 1714, 1715, 1914 |
| AsuC2I | CCSGG | 5 cut(s) | 7, 8, 80, 460, 3132 |
| AsuHPI | GGTGA | 6 cut(s) | 77, 1832, 3193, 3398, 3401, 3547 |
| AsuII | TTCGAA | 1 cut(s) | 3495 |
| AvaI | CYCGRG | 3 cut(s) | 6, 1943, 2477 |
| AvaII | GGWCC | 1 cut(s) | 1914 |
| AxyI | CCTNAGG | 1 cut(s) | 185 |
| BaeGI | GKGCMC | 3 cut(s) | 537, 1225, 1718 |
| BamHI | GGATCC | 1 cut(s) | 328 |
| BanII | GRGCYC | 2 cut(s) | 183, 1718 |
| BbsI | GAAGAC | 3 cut(s) | 75, 1148, 2490 |
| Bbv12I | GWGCWC | 4 cut(s) | 183, 537, 761, 1225 |
| BbvCI | CCTCAGC | 1 cut(s) | 1676 |
| BbvI | GCAGC | 5 cut(s) | 741, 802, 1834, 2093, 3407 |
| BccI | CCATC | 6 cut(s) | 354, 652, 761, 1018, 1280, 3217 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1390, 1424 |
| BciT130I | CCWGG | 2 cut(s) | 1524, 2273 |
| BciVI | GTATCC | 1 cut(s) | 1773 |
| BclI | TGATCA | 1 cut(s) | 3475 |
| BcnI | CCSGG | 5 cut(s) | 7, 8, 80, 460, 3132 |
| BcoDI | GTCTC | 2 cut(s) | 2060, 2252 |
| BfaI | CTAG | 9 cut(s) | 683, 855, 987, 1292, 2331, 2513, 3279, 3287, 3429 |
| BfmI | CTRYAG | 2 cut(s) | 21, 1820 |
| BfoI | RGCGCY | 2 cut(s) | 1398, 1864 |
| BfrI | CTTAAG | 1 cut(s) | 1435 |
| BfuAI | ACCTGC | 1 cut(s) | 2991 |
| BfuI | GTATCC | 1 cut(s) | 1773 |
| BglII | AGATCT | 1 cut(s) | 2515 |
| BisI | GCNGC | 5 cut(s) | 730, 791, 1823, 2107, 3396 |
| BlsI | GCNGC | 5 cut(s) | 731, 792, 1824, 2108, 3397 |
| BmcAI | AGTACT | 1 cut(s) | 2579 |
| Bme1390I | CCNGG | 7 cut(s) | 7, 8, 80, 460, 1524, 2273, 3132 |
| Bme18I | GGWCC | 1 cut(s) | 1914 |
| BmeT110I | CYCGRG | 3 cut(s) | 6, 1943, 2477 |
| BmgT120I | GGNCC | 4 cut(s) | 4, 1714, 1715, 1914 |
| BmiI | GGNNCC | 4 cut(s) | 330, 1716, 1916, 2635 |
| BmrFI | CCNGG | 7 cut(s) | 7, 8, 80, 460, 1524, 2273, 3132 |
| BmsI | GCATC | 4 cut(s) | 1732, 2562, 2706, 2850 |
| BoxI | GACNNNNGTC | 3 cut(s) | 1507, 3017, 3363 |
| BpiI | GAAGAC | 3 cut(s) | 75, 1148, 2490 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 694, 726, 743, 775 |
| BpmI | CTGGAG | 4 cut(s) | 614, 2609, 2738, 2882 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1676 |
| Bpu14I | TTCGAA | 1 cut(s) | 3495 |
| BpuMI | CCSGG | 5 cut(s) | 7, 8, 80, 460, 3132 |
| Bsa29I | ATCGAT | 2 cut(s) | 1836, 1884 |
| BsaAI | YACGTR | 1 cut(s) | 1456 |
| BsaBI | GATNNNNATC | 3 cut(s) | 171, 909, 2727 |
| BsaJI | CCNNGG | 6 cut(s) | 6, 32, 79, 502, 2271, 2478 |
| BsaWI | WCCGGW | 2 cut(s) | 1795, 3556 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3165, 3195, 3455, 3485 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 567, 2065, 3362, 3415, 3459 |
| Bse1I | ACTGG | 5 cut(s) | 597, 930, 1646, 3155, 3453 |
| Bse21I | CCTNAGG | 1 cut(s) | 185 |
| Bse3DI | GCAATG | 4 cut(s) | 1323, 1995, 2336, 3061 |
| Bse8I | GATNNNNATC | 3 cut(s) | 171, 909, 2727 |
| BseBI | CCWGG | 2 cut(s) | 1524, 2273 |
| BseCI | ATCGAT | 2 cut(s) | 1836, 1884 |
| BseDI | CCNNGG | 6 cut(s) | 6, 32, 79, 502, 2271, 2478 |
| BseGI | GGATG | 5 cut(s) | 663, 772, 1804, 1991, 2318 |
| BseJI | GATNNNNATC | 3 cut(s) | 171, 909, 2727 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 567, 2065, 3362, 3415, 3459 |
| BseMI | GCAATG | 4 cut(s) | 1323, 1995, 2336, 3061 |
| BseMII | CTCAG | 5 cut(s) | 44, 176, 576, 1667, 2217 |
| BseNI | ACTGG | 5 cut(s) | 597, 930, 1646, 3155, 3453 |
| BseRI | GAGGAG | 3 cut(s) | 425, 1961, 2495 |
| BseSI | GKGCMC | 3 cut(s) | 537, 1225, 1718 |
| BseXI | GCAGC | 5 cut(s) | 741, 802, 1834, 2093, 3407 |
| Bsh1236I | CGCG | 1 cut(s) | 118 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3367 |
| BshFI | GGCC | 2 cut(s) | 5, 1716 |
| BshVI | ATCGAT | 2 cut(s) | 1836, 1884 |
| BsiEI | CGRYCG | 1 cut(s) | 3367 |
| BsiHKAI | GWGCWC | 4 cut(s) | 183, 537, 761, 1225 |
| BsiHKCI | CYCGRG | 3 cut(s) | 6, 1943, 2477 |
| BsiSI | CCGG | 6 cut(s) | 7, 79, 459, 1796, 3132, 3557 |
| BslFI | GGGAC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 567, 2065, 3362, 3415, 3459 |
| BsmAI | GTCTC | 2 cut(s) | 2060, 2252 |
| BsmBI | CGTCTC | 1 cut(s) | 2252 |
| BsmFI | GGGAC | 1 cut(s) | 152 |
| BsmI | GAATGC | 3 cut(s) | 841, 1655, 1738 |
| BsnI | GGCC | 2 cut(s) | 5, 1716 |
| BsoBI | CYCGRG | 3 cut(s) | 6, 1943, 2477 |
| Bsp119I | TTCGAA | 1 cut(s) | 3495 |
| Bsp120I | GGGCCC | 1 cut(s) | 1714 |
| Bsp1286I | GDGCHC | 5 cut(s) | 183, 537, 761, 1225, 1718 |
| Bsp1407I | TGTACA | 2 cut(s) | 1191, 1967 |
| Bsp19I | CCATGG | 1 cut(s) | 32 |
| BspANI | GGCC | 2 cut(s) | 5, 1716 |
| BspCNI | CTCAG | 5 cut(s) | 45, 177, 575, 1668, 2216 |
| BspDI | ATCGAT | 2 cut(s) | 1836, 1884 |
| BspFNI | CGCG | 1 cut(s) | 118 |
| BspHI | TCATGA | 1 cut(s) | 712 |
| BspLI | GGNNCC | 4 cut(s) | 330, 1716, 1916, 2635 |
| BspMAI | CTGCAG | 1 cut(s) | 1824 |
| BspMI | ACCTGC | 1 cut(s) | 2991 |
| BspPI | GGATC | 4 cut(s) | 323, 336, 918, 1594 |
| BspT104I | TTCGAA | 1 cut(s) | 3495 |
| BspTI | CTTAAG | 1 cut(s) | 1435 |
| BsrBI | CCGCTC | 2 cut(s) | 2227, 3202 |
| BsrDI | GCAATG | 4 cut(s) | 1323, 1995, 2336, 3061 |
| BsrGI | TGTACA | 2 cut(s) | 1191, 1967 |
| BsrI | ACTGG | 5 cut(s) | 597, 930, 1646, 3155, 3453 |
| BssECI | CCNNGG | 6 cut(s) | 6, 32, 79, 502, 2271, 2478 |
| BssT1I | CCWWGG | 2 cut(s) | 32, 502 |
| Bst2UI | CCWGG | 2 cut(s) | 1524, 2273 |
| Bst4CI | ACNGT | 5 cut(s) | 108, 1125, 2039, 3332, 3502 |
| Bst6I | CTCTTC | 4 cut(s) | 285, 1211, 1301, 3573 |
| BstAFI | CTTAAG | 1 cut(s) | 1435 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3525 |
| BstAUI | TGTACA | 2 cut(s) | 1191, 1967 |
| BstBAI | YACGTR | 1 cut(s) | 1456 |
| BstBI | TTCGAA | 1 cut(s) | 3495 |
| BstC8I | GCNNGC | 9 cut(s) | 1150, 1242, 1399, 1572, 2551, 2695, 2839, 2907, 2989 |
| BstDSI | CCRYGG | 1 cut(s) | 32 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 565 |
| BstF5I | GGATG | 5 cut(s) | 663, 772, 1804, 1991, 2318 |
| BstFNI | CGCG | 1 cut(s) | 118 |
| BstH2I | RGCGCY | 2 cut(s) | 1398, 1864 |
| BstHHI | GCGC | 4 cut(s) | 118, 1397, 1863, 3242 |
| BstMAI | GTCTC | 2 cut(s) | 2060, 2252 |
| BstMCI | CGRYCG | 1 cut(s) | 3367 |
| BstNI | CCWGG | 2 cut(s) | 1524, 2273 |
| BstNSI | RCATGY | 4 cut(s) | 1332, 1568, 2987, 3528 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 1507, 3017, 3363 |
| BstSCI | CCNGG | 7 cut(s) | 5, 6, 78, 458, 1522, 2271, 3130 |
| BstSFI | CTRYAG | 2 cut(s) | 21, 1820 |
| BstSLI | GKGCMC | 3 cut(s) | 537, 1225, 1718 |
| BstUI | CGCG | 1 cut(s) | 118 |
| BstV1I | GCAGC | 5 cut(s) | 741, 802, 1834, 2093, 3407 |
| BstV2I | GAAGAC | 3 cut(s) | 75, 1148, 2490 |
| BstX2I | RGATCY | 2 cut(s) | 328, 2515 |
| BstYI | RGATCY | 2 cut(s) | 328, 2515 |
| Bsu15I | ATCGAT | 2 cut(s) | 1836, 1884 |
| Bsu36I | CCTNAGG | 1 cut(s) | 185 |
| BsuI | GTATCC | 1 cut(s) | 1773 |
| BsuRI | GGCC | 2 cut(s) | 5, 1716 |
| BsuTUI | ATCGAT | 2 cut(s) | 1836, 1884 |
| BtgI | CCRYGG | 1 cut(s) | 32 |
| BtsCI | GGATG | 5 cut(s) | 663, 772, 1804, 1991, 2318 |
| BtsIMutI | CAGTG | 4 cut(s) | 2286, 2563, 2707, 2851 |
| BveI | ACCTGC | 1 cut(s) | 2991 |
| Cac8I | GCNNGC | 9 cut(s) | 1150, 1242, 1399, 1572, 2551, 2695, 2839, 2907, 2989 |
| CciI | TCATGA | 1 cut(s) | 712 |
| CfoI | GCGC | 4 cut(s) | 118, 1397, 1863, 3242 |
| Cfr13I | GGNCC | 4 cut(s) | 4, 1714, 1715, 1914 |
| Cfr9I | CCCGGG | 1 cut(s) | 6 |
| ClaI | ATCGAT | 2 cut(s) | 1836, 1884 |
| CseI | GACGC | 1 cut(s) | 3387 |
| Csp6I | GTAC | 7 cut(s) | 40, 341, 1192, 1968, 2578, 2952, 3306 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 932, 967 |
| CviQI | GTAC | 7 cut(s) | 40, 341, 1192, 1968, 2578, 2952, 3306 |
| DraI | TTTAAA | 3 cut(s) | 1090, 2439, 2727 |
| Eam1104I | CTCTTC | 4 cut(s) | 285, 1211, 1301, 3573 |
| EarI | CTCTTC | 4 cut(s) | 285, 1211, 1301, 3573 |
| Ecl136II | GAGCTC | 1 cut(s) | 181 |
| Eco130I | CCWWGG | 2 cut(s) | 32, 502 |
| Eco24I | GRGCYC | 2 cut(s) | 183, 1718 |
| Eco32I | GATATC | 2 cut(s) | 169, 1558 |
| Eco47I | GGWCC | 1 cut(s) | 1914 |
| Eco47III | AGCGCT | 1 cut(s) | 1862 |
| Eco53kI | GAGCTC | 1 cut(s) | 181 |
| Eco57I | CTGAAG | 6 cut(s) | 1256, 1671, 2450, 2594, 3013, 3074 |
| Eco81I | CCTNAGG | 1 cut(s) | 185 |
| Eco88I | CYCGRG | 3 cut(s) | 6, 1943, 2477 |
| EcoICRI | GAGCTC | 1 cut(s) | 181 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 565 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1714, 1914 |
| EcoRI | GAATTC | 1 cut(s) | 466 |
| EcoRII | CCWGG | 2 cut(s) | 1522, 2271 |
| EcoRV | GATATC | 2 cut(s) | 169, 1558 |
| EcoT14I | CCWWGG | 2 cut(s) | 32, 502 |
| EcoT22I | ATGCAT | 1 cut(s) | 1467 |
| EcoT38I | GRGCYC | 2 cut(s) | 183, 1718 |
| ErhI | CCWWGG | 2 cut(s) | 32, 502 |
| Esp3I | CGTCTC | 1 cut(s) | 2252 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1298, 1330, 1370, 1402, 3512, 3544 |
| FaqI | GGGAC | 1 cut(s) | 152 |
| FauI | CCCGC | 1 cut(s) | 83 |
| FbaI | TGATCA | 1 cut(s) | 3475 |
| FblI | GTMKAC | 1 cut(s) | 1777 |
| Fnu4HI | GCNGC | 5 cut(s) | 730, 791, 1823, 2107, 3396 |
| FokI | GGATG | 5 cut(s) | 670, 779, 1811, 1978, 2325 |
| FriOI | GRGCYC | 2 cut(s) | 183, 1718 |
| Fsp4HI | GCNGC | 5 cut(s) | 730, 791, 1823, 2107, 3396 |
| FspBI | CTAG | 9 cut(s) | 683, 855, 987, 1292, 2331, 2513, 3279, 3287, 3429 |
| GlaI | GCGC | 4 cut(s) | 117, 1396, 1862, 3241 |
| GluI | GCNGC | 5 cut(s) | 730, 791, 1823, 2107, 3396 |
| GsuI | CTGGAG | 4 cut(s) | 614, 2609, 2738, 2882 |
| HaeII | RGCGCY | 2 cut(s) | 1398, 1864 |
| HaeIII | GGCC | 2 cut(s) | 5, 1716 |
| HapII | CCGG | 6 cut(s) | 7, 79, 459, 1796, 3132, 3557 |
| HgaI | GACGC | 1 cut(s) | 3387 |
| HhaI | GCGC | 4 cut(s) | 118, 1397, 1863, 3242 |
| Hin6I | GCGC | 4 cut(s) | 116, 1395, 1861, 3240 |
| HinP1I | GCGC | 4 cut(s) | 116, 1395, 1861, 3240 |
| HincII | GTYRAC | 1 cut(s) | 3012 |
| HindII | GTYRAC | 1 cut(s) | 3012 |
| HindIII | AAGCTT | 1 cut(s) | 2162 |
| HpaII | CCGG | 6 cut(s) | 7, 79, 459, 1796, 3132, 3557 |
| HphI | GGTGA | 6 cut(s) | 77, 1832, 3193, 3398, 3401, 3547 |
| Hpy166II | GTNNAC | 5 cut(s) | 535, 697, 1223, 1778, 3012 |
| Hpy8I | GTNNAC | 5 cut(s) | 535, 697, 1223, 1778, 3012 |
| Hpy99I | CGWCG | 2 cut(s) | 1506, 2217 |
| HpyCH4III | ACNGT | 5 cut(s) | 108, 1125, 2039, 3332, 3502 |
| HpyCH4IV | ACGT | 5 cut(s) | 542, 997, 1455, 1615, 2212 |
| HpySE526I | ACGT | 5 cut(s) | 542, 997, 1455, 1615, 2212 |
| HspAI | GCGC | 4 cut(s) | 116, 1395, 1861, 3240 |
| Ksp22I | TGATCA | 1 cut(s) | 3475 |
| Lsp1109I | GCAGC | 5 cut(s) | 741, 802, 1834, 2093, 3407 |
| LweI | GCATC | 4 cut(s) | 1732, 2562, 2706, 2850 |
| MaeI | CTAG | 9 cut(s) | 683, 855, 987, 1292, 2331, 2513, 3279, 3287, 3429 |
| MaeII | ACGT | 5 cut(s) | 542, 997, 1455, 1615, 2212 |
| MaeIII | GTNAC | 4 cut(s) | 979, 1892, 3326, 3448 |
| MbiI | CCGCTC | 2 cut(s) | 2227, 3202 |
| MfeI | CAATTG | 3 cut(s) | 192, 1596, 3022 |
| MflI | RGATCY | 2 cut(s) | 328, 2515 |
| MhlI | GDGCHC | 5 cut(s) | 183, 537, 761, 1225, 1718 |
| MlyI | GAGTC | 5 cut(s) | 981, 1442, 1517, 2401, 3558 |
| MmeI | TCCRAC | 8 cut(s) | 90, 556, 1058, 1083, 2119, 2195, 2393, 3347 |
| Mph1103I | ATGCAT | 1 cut(s) | 1467 |
| MroXI | GAANNNNTTC | 3 cut(s) | 583, 1133, 2153 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1664 |
| MspA1I | CMGCKG | 1 cut(s) | 3363 |
| MspCI | CTTAAG | 1 cut(s) | 1435 |
| MspI | CCGG | 6 cut(s) | 7, 79, 459, 1796, 3132, 3557 |
| MspR9I | CCNGG | 7 cut(s) | 7, 8, 80, 460, 1524, 2273, 3132 |
| MunI | CAATTG | 3 cut(s) | 192, 1596, 3022 |
| Mva1269I | GAATGC | 3 cut(s) | 841, 1655, 1738 |
| MvaI | CCWGG | 2 cut(s) | 1524, 2273 |
| MvnI | CGCG | 1 cut(s) | 118 |
| NciI | CCSGG | 5 cut(s) | 7, 8, 80, 460, 3132 |
| NcoI | CCATGG | 1 cut(s) | 32 |
| NlaIV | GGNNCC | 4 cut(s) | 330, 1716, 1916, 2635 |
| NsiI | ATGCAT | 1 cut(s) | 1467 |
| NspI | RCATGY | 4 cut(s) | 1332, 1568, 2987, 3528 |
| NspV | TTCGAA | 1 cut(s) | 3495 |
| PaeR7I | CTCGAG | 1 cut(s) | 1943 |
| PagI | TCATGA | 1 cut(s) | 712 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 349 |
| PctI | GAATGC | 3 cut(s) | 841, 1655, 1738 |
| PdmI | GAANNNNTTC | 3 cut(s) | 583, 1133, 2153 |
| PfoI | TCCNGGA | 1 cut(s) | 3130 |
| PkrI | GCNGC | 5 cut(s) | 731, 792, 1824, 2108, 3397 |
| PleI | GAGTC | 5 cut(s) | 980, 1442, 1516, 2400, 3557 |
| PpsI | GAGTC | 5 cut(s) | 980, 1442, 1516, 2400, 3557 |
| Ppu21I | YACGTR | 1 cut(s) | 1456 |
| PpuMI | RGGWCCY | 1 cut(s) | 1914 |
| PshAI | GACNNNNGTC | 3 cut(s) | 1507, 3017, 3363 |
| PsiI | TTATAA | 1 cut(s) | 843 |
| Psp124BI | GAGCTC | 1 cut(s) | 183 |
| Psp1406I | AACGTT | 1 cut(s) | 997 |
| Psp5II | RGGWCCY | 1 cut(s) | 1914 |
| Psp6I | CCWGG | 2 cut(s) | 1522, 2271 |
| PspGI | CCWGG | 2 cut(s) | 1522, 2271 |
| PspN4I | GGNNCC | 4 cut(s) | 330, 1716, 1916, 2635 |
| PspOMI | GGGCCC | 1 cut(s) | 1714 |
| PspPI | GGNCC | 4 cut(s) | 4, 1714, 1715, 1914 |
| PspPPI | RGGWCCY | 1 cut(s) | 1914 |
| PstI | CTGCAG | 1 cut(s) | 1824 |
| PsuI | RGATCY | 2 cut(s) | 328, 2515 |
| RsaI | GTAC | 7 cut(s) | 41, 342, 1193, 1969, 2579, 2953, 3307 |
| RsaNI | GTAC | 7 cut(s) | 40, 341, 1192, 1968, 2578, 2952, 3306 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1664 |
| SacI | GAGCTC | 1 cut(s) | 183 |
| SatI | GCNGC | 5 cut(s) | 730, 791, 1823, 2107, 3396 |
| Sau96I | GGNCC | 4 cut(s) | 4, 1714, 1715, 1914 |
| ScaI | AGTACT | 1 cut(s) | 2579 |
| SchI | GAGTC | 5 cut(s) | 981, 1442, 1517, 2401, 3558 |
| ScrFI | CCNGG | 7 cut(s) | 7, 8, 80, 460, 1524, 2273, 3132 |
| SduI | GDGCHC | 5 cut(s) | 183, 537, 761, 1225, 1718 |
| SfaNI | GCATC | 4 cut(s) | 1732, 2562, 2706, 2850 |
| SfcI | CTRYAG | 2 cut(s) | 21, 1820 |
| Sfr274I | CTCGAG | 1 cut(s) | 1943 |
| SfuI | TTCGAA | 1 cut(s) | 3495 |
| SinI | GGWCC | 1 cut(s) | 1914 |
| SlaI | CTCGAG | 1 cut(s) | 1943 |
| SmaI | CCCGGG | 1 cut(s) | 8 |
| SmiI | ATTTAAAT | 2 cut(s) | 2439, 2727 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1664 |
| SmlI | CTYRAG | 2 cut(s) | 1435, 1943 |
| SmoI | CTYRAG | 2 cut(s) | 1435, 1943 |
| SrfI | GCCCGGGC | 1 cut(s) | 8 |
| SspI | AATATT | 1 cut(s) | 3265 |
| SspMI | CTAG | 9 cut(s) | 683, 855, 987, 1292, 2331, 2513, 3279, 3287, 3429 |
| SstI | GAGCTC | 1 cut(s) | 183 |
| StyD4I | CCNGG | 7 cut(s) | 5, 6, 78, 458, 1522, 2271, 3130 |
| StyI | CCWWGG | 2 cut(s) | 32, 502 |
| SwaI | ATTTAAAT | 2 cut(s) | 2439, 2727 |
| TaaI | ACNGT | 5 cut(s) | 108, 1125, 2039, 3332, 3502 |
| TaiI | ACGT | 5 cut(s) | 545, 1000, 1458, 1618, 2215 |
| TaqII | GACCGA | 1 cut(s) | 3410 |
| TatI | WGTACW | 4 cut(s) | 1191, 1967, 2577, 2951 |
| TscAI | CASTG | 4 cut(s) | 2286, 2563, 2707, 2851 |
| TseI | GCWGC | 5 cut(s) | 729, 790, 1822, 2106, 3395 |
| TspGWI | ACGGA | 3 cut(s) | 779, 2276, 2957 |
| TspMI | CCCGGG | 1 cut(s) | 6 |
| TspRI | CASTG | 4 cut(s) | 2286, 2563, 2707, 2851 |
| Vha464I | CTTAAG | 1 cut(s) | 1435 |
| VneI | GTGCAC | 2 cut(s) | 533, 1221 |
| VpaK11BI | GGWCC | 1 cut(s) | 1914 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 565 |
| XbaI | TCTAGA | 1 cut(s) | 2512 |
| XceI | RCATGY | 4 cut(s) | 1332, 1568, 2987, 3528 |
| XhoI | CTCGAG | 1 cut(s) | 1943 |
| XmaI | CCCGGG | 1 cut(s) | 6 |
| XmiI | GTMKAC | 1 cut(s) | 1777 |
| XmnI | GAANNNNTTC | 3 cut(s) | 583, 1133, 2153 |
| XspI | CTAG | 9 cut(s) | 683, 855, 987, 1292, 2331, 2513, 3279, 3287, 3429 |
| ZrmI | AGTACT | 1 cut(s) | 2579 |
| Zsp2I | ATGCAT | 1 cut(s) | 1467 |