TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 704, 983 |
| AarI | CACCTGC | 1 cut(s) | 1359 |
| AatII | GACGTC | 1 cut(s) | 1401 |
| Acc36I | ACCTGC | 1 cut(s) | 1359 |
| AccI | GTMKAC | 3 cut(s) | 242, 619, 2051 |
| AciI | CCGC | 5 cut(s) | 255, 274, 288, 510, 1585 |
| AclWI | GGATC | 5 cut(s) | 134, 279, 521, 560, 659 |
| AcsI | RAATTY | 3 cut(s) | 322, 426, 569 |
| AcuI | CTGAAG | 5 cut(s) | 318, 893, 1164, 1452, 1550 |
| AcyI | GRCGYC | 1 cut(s) | 1398 |
| AfaI | GTAC | 3 cut(s) | 1020, 1215, 1914 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1555 |
| AflIII | ACRYGT | 2 cut(s) | 1405, 1684 |
| AhlI | ACTAGT | 1 cut(s) | 1220 |
| AjiI | CACGTC | 1 cut(s) | 1486 |
| AjnI | CCWGG | 1 cut(s) | 1834 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 405, 437, 945, 977 |
| AluBI | AGCT | 9 cut(s) | 15, 164, 913, 921, 1010, 1648, 1662, 2011, 2176 |
| AluI | AGCT | 9 cut(s) | 15, 164, 913, 921, 1010, 1648, 1662, 2011, 2176 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 17, 1260 |
| Alw26I | GTCTC | 2 cut(s) | 1671, 1932 |
| AlwI | GGATC | 5 cut(s) | 134, 279, 521, 560, 659 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 977, 1648 |
| Ama87I | CYCGRG | 1 cut(s) | 1787 |
| AoxI | GGCC | 1 cut(s) | 666 |
| ApeKI | GCWGC | 4 cut(s) | 185, 442, 1387, 1648 |
| ApoI | RAATTY | 3 cut(s) | 322, 426, 569 |
| AseI | ATTAAT | 1 cut(s) | 1728 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 929, 957, 1157, 1569 |
| AsuC2I | CCSGG | 1 cut(s) | 1365 |
| AsuHPI | GGTGA | 2 cut(s) | 12, 269 |
| AvaI | CYCGRG | 1 cut(s) | 1787 |
| AxyI | CCTNAGG | 1 cut(s) | 1554 |
| BanII | GRGCYC | 2 cut(s) | 17, 1028 |
| BbsI | GAAGAC | 4 cut(s) | 992, 1300, 1401, 2105 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 17, 1260 |
| BbvI | GCAGC | 4 cut(s) | 172, 454, 1374, 1635 |
| BccI | CCATC | 1 cut(s) | 1633 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1217, 1251 |
| BciT130I | CCWGG | 1 cut(s) | 1836 |
| BciVI | GTATCC | 2 cut(s) | 61, 1617 |
| BcnI | CCSGG | 1 cut(s) | 1365 |
| BcoDI | GTCTC | 2 cut(s) | 1671, 1932 |
| BcuI | ACTAGT | 1 cut(s) | 1220 |
| BfaI | CTAG | 5 cut(s) | 419, 831, 1136, 1163, 1221 |
| BfuAI | ACCTGC | 1 cut(s) | 1359 |
| BfuI | GTATCC | 2 cut(s) | 61, 1617 |
| BglII | AGATCT | 3 cut(s) | 1045, 1268, 2149 |
| BisI | GCNGC | 4 cut(s) | 186, 443, 1388, 1649 |
| BlsI | GCNGC | 4 cut(s) | 187, 444, 1389, 1650 |
| BmcAI | AGTACT | 2 cut(s) | 1020, 1215 |
| Bme1390I | CCNGG | 2 cut(s) | 1365, 1836 |
| BmeT110I | CYCGRG | 1 cut(s) | 1787 |
| BmgBI | CACGTC | 1 cut(s) | 1486 |
| BmiI | GGNNCC | 1 cut(s) | 694 |
| BmrFI | CCNGG | 2 cut(s) | 1365, 1836 |
| BmrI | ACTGGG | 2 cut(s) | 1031, 1088 |
| BmsI | GCATC | 2 cut(s) | 245, 1293 |
| BmuI | ACTGGG | 2 cut(s) | 1031, 1088 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1986 |
| BpiI | GAAGAC | 4 cut(s) | 992, 1300, 1401, 2105 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| BpuEI | CTTGAG | 1 cut(s) | 418 |
| BpuMI | CCSGG | 1 cut(s) | 1365 |
| BsaAI | YACGTR | 1 cut(s) | 1916 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2154 |
| BsaHI | GRCGYC | 1 cut(s) | 1398 |
| BsaJI | CCNNGG | 2 cut(s) | 26, 1834 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1464, 1494 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1555 |
| Bse1I | ACTGG | 5 cut(s) | 446, 1026, 1083, 1429, 2032 |
| Bse21I | CCTNAGG | 1 cut(s) | 1554 |
| Bse3DI | GCAATG | 1 cut(s) | 1167 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2154 |
| BseBI | CCWGG | 1 cut(s) | 1836 |
| BseDI | CCNNGG | 2 cut(s) | 26, 1834 |
| BseGI | GGATG | 4 cut(s) | 115, 142, 481, 1308 |
| BseJI | GATNNNNATC | 1 cut(s) | 2154 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1555 |
| BseMI | GCAATG | 1 cut(s) | 1167 |
| BseMII | CTCAG | 3 cut(s) | 327, 1330, 1655 |
| BseNI | ACTGG | 5 cut(s) | 446, 1026, 1083, 1429, 2032 |
| BseRI | GAGGAG | 2 cut(s) | 15, 2021 |
| BseXI | GCAGC | 4 cut(s) | 172, 454, 1374, 1635 |
| BsgI | GTGCAG | 1 cut(s) | 1393 |
| BshFI | GGCC | 1 cut(s) | 668 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 17, 1260 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1787 |
| BsiSI | CCGG | 1 cut(s) | 1364 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1555 |
| BsmAI | GTCTC | 2 cut(s) | 1671, 1932 |
| BsmI | GAATGC | 1 cut(s) | 929 |
| BsnI | GGCC | 1 cut(s) | 668 |
| BsoBI | CYCGRG | 1 cut(s) | 1787 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 17, 1028, 1260 |
| BspACI | CCGC | 5 cut(s) | 255, 274, 288, 510, 1585 |
| BspANI | GGCC | 1 cut(s) | 668 |
| BspCNI | CTCAG | 3 cut(s) | 326, 1329, 1654 |
| BspHI | TCATGA | 2 cut(s) | 685, 1330 |
| BspLI | GGNNCC | 1 cut(s) | 694 |
| BspMI | ACCTGC | 1 cut(s) | 1359 |
| BspPI | GGATC | 5 cut(s) | 134, 279, 521, 560, 659 |
| BspQI | GCTCTTC | 1 cut(s) | 22 |
| BsrDI | GCAATG | 1 cut(s) | 1167 |
| BsrI | ACTGG | 5 cut(s) | 446, 1026, 1083, 1429, 2032 |
| BssECI | CCNNGG | 2 cut(s) | 26, 1834 |
| BssNI | GRCGYC | 1 cut(s) | 1398 |
| Bst2UI | CCWGG | 1 cut(s) | 1836 |
| Bst4CI | ACNGT | 2 cut(s) | 683, 1864 |
| Bst6I | CTCTTC | 6 cut(s) | 22, 912, 1036, 1078, 1140, 1595 |
| BstACI | GRCGYC | 1 cut(s) | 1398 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 182, 1312 |
| BstBAI | YACGTR | 1 cut(s) | 1916 |
| BstC8I | GCNNGC | 1 cut(s) | 1906 |
| BstDEI | CTNAG | 7 cut(s) | 313, 1049, 1316, 1554, 1641, 1658, 1733 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1553 |
| BstF5I | GGATG | 4 cut(s) | 115, 142, 481, 1308 |
| BstMAI | GTCTC | 2 cut(s) | 1671, 1932 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 12, 182, 1312 |
| BstNI | CCWGG | 1 cut(s) | 1836 |
| BstNSI | RCATGY | 3 cut(s) | 1176, 1409, 1688 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1986 |
| BstSCI | CCNGG | 2 cut(s) | 1363, 1834 |
| BstV1I | GCAGC | 4 cut(s) | 172, 454, 1374, 1635 |
| BstV2I | GAAGAC | 4 cut(s) | 992, 1300, 1401, 2105 |
| BstX2I | RGATCY | 6 cut(s) | 284, 552, 651, 1045, 1268, 2149 |
| BstYI | RGATCY | 6 cut(s) | 284, 552, 651, 1045, 1268, 2149 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1554 |
| BsuI | GTATCC | 2 cut(s) | 61, 1617 |
| BsuRI | GGCC | 1 cut(s) | 668 |
| BtrI | CACGTC | 1 cut(s) | 1486 |
| BtsCI | GGATG | 4 cut(s) | 115, 142, 481, 1308 |
| BtsI | GCAGTG | 3 cut(s) | 99, 546, 1915 |
| BtsIMutI | CAGTG | 4 cut(s) | 99, 546, 1915, 2025 |
| BveI | ACCTGC | 1 cut(s) | 1359 |
| Cac8I | GCNNGC | 1 cut(s) | 1906 |
| CaiI | CAGNNNCTG | 2 cut(s) | 977, 1648 |
| CciI | TCATGA | 2 cut(s) | 685, 1330 |
| Csp6I | GTAC | 3 cut(s) | 1019, 1214, 1913 |
| CviQI | GTAC | 3 cut(s) | 1019, 1214, 1913 |
| DdeI | CTNAG | 7 cut(s) | 313, 1049, 1316, 1554, 1641, 1658, 1733 |
| DraI | TTTAAA | 1 cut(s) | 1771 |
| Eam1104I | CTCTTC | 6 cut(s) | 22, 912, 1036, 1078, 1140, 1595 |
| EarI | CTCTTC | 6 cut(s) | 22, 912, 1036, 1078, 1140, 1595 |
| Ecl136II | GAGCTC | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 2 cut(s) | 17, 1028 |
| Eco53kI | GAGCTC | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 5 cut(s) | 318, 893, 1164, 1452, 1550 |
| Eco81I | CCTNAGG | 1 cut(s) | 1554 |
| Eco88I | CYCGRG | 1 cut(s) | 1787 |
| EcoICRI | GAGCTC | 1 cut(s) | 15 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1553 |
| EcoRI | GAATTC | 1 cut(s) | 322 |
| EcoRII | CCWGG | 1 cut(s) | 1834 |
| EcoT22I | ATGCAT | 3 cut(s) | 238, 1069, 1308 |
| EcoT38I | GRGCYC | 2 cut(s) | 17, 1028 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 945, 977 |
| FauI | CCCGC | 1 cut(s) | 503 |
| FblI | GTMKAC | 3 cut(s) | 242, 619, 2051 |
| Fnu4HI | GCNGC | 4 cut(s) | 186, 443, 1388, 1649 |
| FokI | GGATG | 4 cut(s) | 122, 149, 488, 1315 |
| FriOI | GRGCYC | 2 cut(s) | 17, 1028 |
| Fsp4HI | GCNGC | 4 cut(s) | 186, 443, 1388, 1649 |
| FspBI | CTAG | 5 cut(s) | 419, 831, 1136, 1163, 1221 |
| GluI | GCNGC | 4 cut(s) | 186, 443, 1388, 1649 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HaeIII | GGCC | 1 cut(s) | 668 |
| HapII | CCGG | 1 cut(s) | 1364 |
| Hin1I | GRCGYC | 1 cut(s) | 1398 |
| HincII | GTYRAC | 3 cut(s) | 243, 1831, 1966 |
| HindII | GTYRAC | 3 cut(s) | 243, 1831, 1966 |
| HindIII | AAGCTT | 1 cut(s) | 2174 |
| HpaI | GTTAAC | 1 cut(s) | 1966 |
| HpaII | CCGG | 1 cut(s) | 1364 |
| HphI | GGTGA | 2 cut(s) | 12, 269 |
| Hpy188I | TCNGA | 8 cut(s) | 679, 973, 1144, 1319, 1494, 1644, 1746, 2019 |
| Hpy99I | CGWCG | 1 cut(s) | 244 |
| HpyAV | CCTTC | 6 cut(s) | 590, 658, 683, 871, 1436, 1799 |
| HpyCH4III | ACNGT | 2 cut(s) | 683, 1864 |
| HpyCH4IV | ACGT | 5 cut(s) | 480, 1398, 1485, 1915, 2048 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 12, 182, 1312 |
| HpyF3I | CTNAG | 7 cut(s) | 313, 1049, 1316, 1554, 1641, 1658, 1733 |
| HpySE526I | ACGT | 5 cut(s) | 480, 1398, 1485, 1915, 2048 |
| Hsp92I | GRCGYC | 1 cut(s) | 1398 |
| KspAI | GTTAAC | 1 cut(s) | 1966 |
| LguI | GCTCTTC | 1 cut(s) | 22 |
| LmnI | GCTCC | 2 cut(s) | 692, 2008 |
| Lsp1109I | GCAGC | 4 cut(s) | 172, 454, 1374, 1635 |
| LweI | GCATC | 2 cut(s) | 245, 1293 |
| MaeI | CTAG | 5 cut(s) | 419, 831, 1136, 1163, 1221 |
| MaeII | ACGT | 5 cut(s) | 480, 1398, 1485, 1915, 2048 |
| MaeIII | GTNAC | 8 cut(s) | 257, 719, 941, 1091, 1124, 1204, 1736, 1979 |
| MfeI | CAATTG | 1 cut(s) | 189 |
| MflI | RGATCY | 6 cut(s) | 284, 552, 651, 1045, 1268, 2149 |
| MhlI | GDGCHC | 4 cut(s) | 8, 17, 1028, 1260 |
| MlyI | GAGTC | 2 cut(s) | 1451, 1475 |
| MmeI | TCCRAC | 1 cut(s) | 403 |
| Mph1103I | ATGCAT | 3 cut(s) | 238, 1069, 1308 |
| MroXI | GAANNNNTTC | 4 cut(s) | 929, 957, 1157, 1569 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1451 |
| MspI | CCGG | 1 cut(s) | 1364 |
| MspR9I | CCNGG | 2 cut(s) | 1365, 1836 |
| MunI | CAATTG | 1 cut(s) | 189 |
| Mva1269I | GAATGC | 1 cut(s) | 929 |
| MvaI | CCWGG | 1 cut(s) | 1836 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 12, 182, 1312 |
| NciI | CCSGG | 1 cut(s) | 1365 |
| NlaIV | GGNNCC | 1 cut(s) | 694 |
| NmuCI | GTSAC | 3 cut(s) | 257, 719, 1979 |
| NsiI | ATGCAT | 3 cut(s) | 238, 1069, 1308 |
| NspI | RCATGY | 3 cut(s) | 1176, 1409, 1688 |
| PaeR7I | CTCGAG | 1 cut(s) | 1787 |
| PagI | TCATGA | 2 cut(s) | 685, 1330 |
| PaqCI | CACCTGC | 1 cut(s) | 1359 |
| PciI | ACATGT | 2 cut(s) | 1405, 1684 |
| PciSI | GCTCTTC | 1 cut(s) | 22 |
| PctI | GAATGC | 1 cut(s) | 929 |
| PdmI | GAANNNNTTC | 4 cut(s) | 929, 957, 1157, 1569 |
| PkrI | GCNGC | 4 cut(s) | 187, 444, 1389, 1650 |
| PleI | GAGTC | 2 cut(s) | 1451, 1474 |
| PpsI | GAGTC | 2 cut(s) | 1451, 1474 |
| Ppu21I | YACGTR | 1 cut(s) | 1916 |
| PscI | ACATGT | 2 cut(s) | 1405, 1684 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1986 |
| PshBI | ATTAAT | 1 cut(s) | 1728 |
| PsiI | TTATAA | 2 cut(s) | 704, 983 |
| Psp124BI | GAGCTC | 1 cut(s) | 17 |
| Psp6I | CCWGG | 1 cut(s) | 1834 |
| PspGI | CCWGG | 1 cut(s) | 1834 |
| PspN4I | GGNNCC | 1 cut(s) | 694 |
| PstNI | CAGNNNCTG | 2 cut(s) | 977, 1648 |
| PsuI | RGATCY | 6 cut(s) | 284, 552, 651, 1045, 1268, 2149 |
| RsaI | GTAC | 3 cut(s) | 1020, 1215, 1914 |
| RsaNI | GTAC | 3 cut(s) | 1019, 1214, 1913 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1451 |
| SacI | GAGCTC | 1 cut(s) | 17 |
| SalI | GTCGAC | 1 cut(s) | 241 |
| SapI | GCTCTTC | 1 cut(s) | 22 |
| SatI | GCNGC | 4 cut(s) | 186, 443, 1388, 1649 |
| ScaI | AGTACT | 2 cut(s) | 1020, 1215 |
| SchI | GAGTC | 2 cut(s) | 1451, 1475 |
| ScrFI | CCNGG | 2 cut(s) | 1365, 1836 |
| SduI | GDGCHC | 4 cut(s) | 8, 17, 1028, 1260 |
| SfaNI | GCATC | 2 cut(s) | 245, 1293 |
| Sfr274I | CTCGAG | 1 cut(s) | 1787 |
| SlaI | CTCGAG | 1 cut(s) | 1787 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1451 |
| SmlI | CTYRAG | 2 cut(s) | 433, 1787 |
| SmoI | CTYRAG | 2 cut(s) | 433, 1787 |
| SpeI | ACTAGT | 1 cut(s) | 1220 |
| SsiI | CCGC | 5 cut(s) | 255, 274, 288, 510, 1585 |
| SspI | AATATT | 2 cut(s) | 1104, 1158 |
| SspMI | CTAG | 5 cut(s) | 419, 831, 1136, 1163, 1221 |
| SstI | GAGCTC | 1 cut(s) | 17 |
| StyD4I | CCNGG | 2 cut(s) | 1363, 1834 |
| TaaI | ACNGT | 2 cut(s) | 683, 1864 |
| TaiI | ACGT | 5 cut(s) | 483, 1401, 1488, 1918, 2051 |
| TaqI | TCGA | 6 cut(s) | 73, 242, 882, 1201, 1653, 1788 |
| TatI | WGTACW | 2 cut(s) | 1018, 1213 |
| TscAI | CASTG | 4 cut(s) | 106, 546, 1915, 2032 |
| TseFI | GTSAC | 3 cut(s) | 257, 719, 1979 |
| TseI | GCWGC | 4 cut(s) | 185, 442, 1387, 1648 |
| Tsp45I | GTSAC | 3 cut(s) | 257, 719, 1979 |
| TspDTI | ATGAA | 6 cut(s) | 354, 478, 702, 1347, 1362, 1526 |
| TspGWI | ACGGA | 1 cut(s) | 1599 |
| TspRI | CASTG | 4 cut(s) | 106, 546, 1915, 2032 |
| VspI | ATTAAT | 1 cut(s) | 1728 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1553 |
| XapI | RAATTY | 3 cut(s) | 322, 426, 569 |
| XbaI | TCTAGA | 1 cut(s) | 1135 |
| XceI | RCATGY | 3 cut(s) | 1176, 1409, 1688 |
| XhoI | CTCGAG | 1 cut(s) | 1787 |
| XmiI | GTMKAC | 3 cut(s) | 242, 619, 2051 |
| XmnI | GAANNNNTTC | 4 cut(s) | 929, 957, 1157, 1569 |
| XspI | CTAG | 5 cut(s) | 419, 831, 1136, 1163, 1221 |
| ZraI | GACGTC | 1 cut(s) | 1399 |
| ZrmI | AGTACT | 2 cut(s) | 1020, 1215 |
| Zsp2I | ATGCAT | 3 cut(s) | 238, 1069, 1308 |