TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 88 - 222 | 1.3e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 342, 1259 |
| AccI | GTMKAC | 1 cut(s) | 649 |
| AccII | CGCG | 1 cut(s) | 1166 |
| AciI | CCGC | 1 cut(s) | 1570 |
| AclI | AACGTT | 2 cut(s) | 489, 824 |
| AclWI | GGATC | 4 cut(s) | 795, 843, 1162, 1243 |
| AcoI | YGGCCR | 1 cut(s) | 828 |
| AcuI | CTGAAG | 3 cut(s) | 44, 879, 986 |
| AdeI | CACNNNGTG | 1 cut(s) | 484 |
| AfaI | GTAC | 3 cut(s) | 656, 755, 941 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 342, 347, 509, 546, 622, 1259 |
| AflIII | ACRYGT | 1 cut(s) | 153 |
| AjnI | CCWGG | 1 cut(s) | 454 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 46, 78 |
| AleI | CACNNNNGTG | 1 cut(s) | 1373 |
| AluBI | AGCT | 9 cut(s) | 22, 69, 236, 257, 620, 1148, 1201, 1468, 1575 |
| AluI | AGCT | 9 cut(s) | 22, 69, 236, 257, 620, 1148, 1201, 1468, 1575 |
| Alw21I | GWGCWC | 2 cut(s) | 646, 1470 |
| Alw26I | GTCTC | 1 cut(s) | 1521 |
| AlwI | GGATC | 4 cut(s) | 795, 843, 1162, 1243 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1519 |
| Ama87I | CYCGRG | 1 cut(s) | 1111 |
| AoxI | GGCC | 1 cut(s) | 828 |
| ApeKI | GCWGC | 4 cut(s) | 173, 282, 316, 773 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 109, 1284 |
| AspLEI | GCGC | 1 cut(s) | 126 |
| AspS9I | GGNCC | 2 cut(s) | 452, 499 |
| AsuHPI | GGTGA | 2 cut(s) | 470, 496 |
| AvaI | CYCGRG | 1 cut(s) | 1111 |
| AvaII | GGWCC | 2 cut(s) | 452, 499 |
| BanII | GRGCYC | 1 cut(s) | 1470 |
| BauI | CACGAG | 2 cut(s) | 194, 479 |
| Bbv12I | GWGCWC | 2 cut(s) | 646, 1470 |
| BbvI | GCAGC | 4 cut(s) | 185, 294, 303, 785 |
| BccI | CCATC | 3 cut(s) | 340, 596, 1291 |
| BceAI | ACGGC | 1 cut(s) | 772 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 571, 605 |
| BciT130I | CCWGG | 1 cut(s) | 456 |
| BciVI | GTATCC | 1 cut(s) | 1256 |
| BcoDI | GTCTC | 1 cut(s) | 1521 |
| BfaI | CTAG | 1 cut(s) | 252 |
| BfmI | CTRYAG | 1 cut(s) | 1075 |
| BfuI | GTATCC | 1 cut(s) | 1256 |
| BisI | GCNGC | 4 cut(s) | 174, 283, 317, 774 |
| BlsI | GCNGC | 4 cut(s) | 175, 284, 318, 775 |
| BmcAI | AGTACT | 1 cut(s) | 941 |
| Bme1390I | CCNGG | 1 cut(s) | 456 |
| Bme18I | GGWCC | 2 cut(s) | 452, 499 |
| BmeT110I | CYCGRG | 1 cut(s) | 1111 |
| BmgT120I | GGNCC | 2 cut(s) | 452, 499 |
| BmiI | GGNNCC | 3 cut(s) | 500, 501, 1090 |
| BmrFI | CCNGG | 1 cut(s) | 456 |
| BmrI | ACTGGG | 1 cut(s) | 519 |
| BmuI | ACTGGG | 1 cut(s) | 519 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 628, 660 |
| BpuEI | CTTGAG | 1 cut(s) | 902 |
| BsaJI | CCNNGG | 4 cut(s) | 341, 444, 831, 1112 |
| BsaWI | WCCGGW | 1 cut(s) | 1404 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 342, 347, 509, 546, 622, 1259 |
| Bse118I | RCCGGY | 1 cut(s) | 961 |
| Bse1I | ACTGG | 2 cut(s) | 514, 1135 |
| BseBI | CCWGG | 1 cut(s) | 456 |
| BseDI | CCNNGG | 4 cut(s) | 341, 444, 831, 1112 |
| BseGI | GGATG | 4 cut(s) | 90, 351, 1188, 1564 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 342, 347, 509, 546, 622, 1259 |
| BseNI | ACTGG | 2 cut(s) | 514, 1135 |
| BseRI | GAGGAG | 1 cut(s) | 1568 |
| BseXI | GCAGC | 4 cut(s) | 185, 294, 303, 785 |
| BseYI | CCCAGC | 1 cut(s) | 616 |
| Bsh1236I | CGCG | 1 cut(s) | 1166 |
| BshFI | GGCC | 1 cut(s) | 830 |
| BsiHKAI | GWGCWC | 2 cut(s) | 646, 1470 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1111 |
| BsiSI | CCGG | 2 cut(s) | 962, 1405 |
| BslFI | GGGAC | 1 cut(s) | 485 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 342, 347, 509, 546, 622, 1259 |
| BsmAI | GTCTC | 1 cut(s) | 1521 |
| BsmFI | GGGAC | 1 cut(s) | 485 |
| BsnI | GGCC | 1 cut(s) | 830 |
| BsoBI | CYCGRG | 1 cut(s) | 1111 |
| Bsp1286I | GDGCHC | 2 cut(s) | 646, 1470 |
| Bsp143I | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| Bsp19I | CCATGG | 2 cut(s) | 341, 444 |
| Bsp68I | TCGCGA | 1 cut(s) | 1166 |
| BspACI | CCGC | 1 cut(s) | 1570 |
| BspANI | GGCC | 1 cut(s) | 830 |
| BspFNI | CGCG | 1 cut(s) | 1166 |
| BspHI | TCATGA | 1 cut(s) | 379 |
| BspLI | GGNNCC | 3 cut(s) | 500, 501, 1090 |
| BspMAI | CTGCAG | 1 cut(s) | 1079 |
| BspPI | GGATC | 4 cut(s) | 795, 843, 1162, 1243 |
| BspQI | GCTCTTC | 1 cut(s) | 1458 |
| BsrFI | RCCGGY | 1 cut(s) | 961 |
| BsrI | ACTGG | 2 cut(s) | 514, 1135 |
| BssAI | RCCGGY | 1 cut(s) | 961 |
| BssECI | CCNNGG | 4 cut(s) | 341, 444, 831, 1112 |
| BssMI | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| BssSI | CACGAG | 2 cut(s) | 194, 479 |
| BssT1I | CCWWGG | 2 cut(s) | 341, 444 |
| Bst2BI | CACGAG | 2 cut(s) | 194, 479 |
| Bst2UI | CCWGG | 1 cut(s) | 456 |
| Bst4CI | ACNGT | 6 cut(s) | 225, 654, 701, 808, 1420, 1548 |
| Bst6I | CTCTTC | 1 cut(s) | 1458 |
| BstC8I | GCNNGC | 2 cut(s) | 20, 1502 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstDSI | CCRYGG | 2 cut(s) | 341, 444 |
| BstF5I | GGATG | 4 cut(s) | 90, 351, 1188, 1564 |
| BstFNI | CGCG | 1 cut(s) | 1166 |
| BstHHI | GCGC | 1 cut(s) | 126 |
| BstKTI | GATC | 5 cut(s) | 803, 838, 1170, 1235, 1251 |
| BstMAI | GTCTC | 1 cut(s) | 1521 |
| BstMBI | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 288 |
| BstNI | CCWGG | 1 cut(s) | 456 |
| BstNSI | RCATGY | 3 cut(s) | 157, 1500, 1504 |
| BstSCI | CCNGG | 1 cut(s) | 454 |
| BstSFI | CTRYAG | 1 cut(s) | 1075 |
| BstUI | CGCG | 1 cut(s) | 1166 |
| BstV1I | GCAGC | 4 cut(s) | 185, 294, 303, 785 |
| BstX2I | RGATCY | 2 cut(s) | 800, 1248 |
| BstYI | RGATCY | 2 cut(s) | 800, 1248 |
| BsuI | GTATCC | 1 cut(s) | 1256 |
| BsuRI | GGCC | 1 cut(s) | 830 |
| BtgI | CCRYGG | 2 cut(s) | 341, 444 |
| BtsCI | GGATG | 4 cut(s) | 90, 351, 1188, 1564 |
| BtsI | GCAGTG | 3 cut(s) | 887, 1084, 1493 |
| BtsIMutI | CAGTG | 5 cut(s) | 804, 887, 1084, 1090, 1493 |
| BtuMI | TCGCGA | 1 cut(s) | 1166 |
| Cac8I | GCNNGC | 2 cut(s) | 20, 1502 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1519 |
| CciI | TCATGA | 1 cut(s) | 379 |
| CfoI | GCGC | 1 cut(s) | 126 |
| Cfr10I | RCCGGY | 1 cut(s) | 961 |
| Cfr13I | GGNCC | 2 cut(s) | 452, 499 |
| Csp6I | GTAC | 3 cut(s) | 655, 754, 940 |
| CviQI | GTAC | 3 cut(s) | 655, 754, 940 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| DpnI | GATC | 5 cut(s) | 802, 837, 1169, 1234, 1250 |
| DpnII | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| DraI | TTTAAA | 3 cut(s) | 555, 711, 1396 |
| DraIII | CACNNNGTG | 1 cut(s) | 484 |
| EaeI | YGGCCR | 1 cut(s) | 828 |
| Eam1104I | CTCTTC | 1 cut(s) | 1458 |
| EarI | CTCTTC | 1 cut(s) | 1458 |
| EciI | GGCGGA | 1 cut(s) | 1585 |
| Ecl136II | GAGCTC | 1 cut(s) | 1468 |
| Eco130I | CCWWGG | 2 cut(s) | 341, 444 |
| Eco24I | GRGCYC | 1 cut(s) | 1470 |
| Eco47I | GGWCC | 2 cut(s) | 452, 499 |
| Eco53kI | GAGCTC | 1 cut(s) | 1468 |
| Eco57I | CTGAAG | 3 cut(s) | 44, 879, 986 |
| Eco88I | CYCGRG | 1 cut(s) | 1111 |
| EcoICRI | GAGCTC | 1 cut(s) | 1468 |
| EcoO109I | RGGNCCY | 2 cut(s) | 452, 499 |
| EcoRI | GAATTC | 2 cut(s) | 48, 565 |
| EcoRII | CCWGG | 1 cut(s) | 454 |
| EcoT14I | CCWWGG | 2 cut(s) | 341, 444 |
| EcoT22I | ATGCAT | 1 cut(s) | 1502 |
| EcoT38I | GRGCYC | 1 cut(s) | 1470 |
| ErhI | CCWWGG | 2 cut(s) | 341, 444 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 220, 252, 487, 519, 864, 896 |
| FaqI | GGGAC | 1 cut(s) | 485 |
| FblI | GTMKAC | 1 cut(s) | 649 |
| Fnu4HI | GCNGC | 4 cut(s) | 174, 283, 317, 774 |
| FokI | GGATG | 4 cut(s) | 77, 358, 1175, 1571 |
| FriOI | GRGCYC | 1 cut(s) | 1470 |
| Fsp4HI | GCNGC | 4 cut(s) | 174, 283, 317, 774 |
| FspBI | CTAG | 1 cut(s) | 252 |
| GlaI | GCGC | 1 cut(s) | 125 |
| GluI | GCNGC | 4 cut(s) | 174, 283, 317, 774 |
| GsaI | CCCAGC | 1 cut(s) | 620 |
| HaeIII | GGCC | 1 cut(s) | 830 |
| HapII | CCGG | 2 cut(s) | 962, 1405 |
| HhaI | GCGC | 1 cut(s) | 126 |
| Hin6I | GCGC | 1 cut(s) | 124 |
| HinP1I | GCGC | 1 cut(s) | 124 |
| HincII | GTYRAC | 2 cut(s) | 151, 221 |
| HindII | GTYRAC | 2 cut(s) | 151, 221 |
| HindIII | AAGCTT | 1 cut(s) | 67 |
| HinfI | GANTC | 2 cut(s) | 37, 884 |
| HpaII | CCGG | 2 cut(s) | 962, 1405 |
| HphI | GGTGA | 2 cut(s) | 470, 496 |
| Hpy166II | GTNNAC | 4 cut(s) | 151, 221, 487, 650 |
| Hpy188I | TCNGA | 4 cut(s) | 270, 898, 1057, 1521 |
| Hpy8I | GTNNAC | 4 cut(s) | 151, 221, 487, 650 |
| HpyAV | CCTTC | 6 cut(s) | 19, 443, 714, 721, 903, 1010 |
| HpyCH4III | ACNGT | 6 cut(s) | 225, 654, 701, 808, 1420, 1548 |
| HpyCH4IV | ACGT | 3 cut(s) | 489, 824, 924 |
| HpyCH4V | TGCA | 9 cut(s) | 33, 173, 582, 871, 980, 1077, 1384, 1486, 1500 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 288 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| HpySE526I | ACGT | 3 cut(s) | 489, 824, 924 |
| HspAI | GCGC | 1 cut(s) | 124 |
| KflI | GGGWCCC | 1 cut(s) | 499 |
| Kzo9I | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| LguI | GCTCTTC | 1 cut(s) | 1458 |
| LmnI | GCTCC | 1 cut(s) | 1572 |
| Lsp1109I | GCAGC | 4 cut(s) | 185, 294, 303, 785 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeII | ACGT | 3 cut(s) | 489, 824, 924 |
| MaeIII | GTNAC | 7 cut(s) | 304, 513, 695, 781, 808, 885, 1400 |
| MalI | GATC | 5 cut(s) | 802, 837, 1169, 1234, 1250 |
| MboI | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| MboII | GAAGA | 3 cut(s) | 736, 1258, 1475 |
| MfeI | CAATTG | 1 cut(s) | 397 |
| MflI | RGATCY | 2 cut(s) | 800, 1248 |
| MhlI | GDGCHC | 2 cut(s) | 646, 1470 |
| MlyI | GAGTC | 1 cut(s) | 893 |
| MmeI | TCCRAC | 1 cut(s) | 1115 |
| Mph1103I | ATGCAT | 1 cut(s) | 1502 |
| MroXI | GAANNNNTTC | 2 cut(s) | 109, 1284 |
| MseI | TTAA | 7 cut(s) | 81, 554, 630, 689, 710, 852, 1395 |
| MslI | CAYNNNNRTG | 3 cut(s) | 866, 1373, 1418 |
| MspA1I | CMGCKG | 1 cut(s) | 620 |
| MspI | CCGG | 2 cut(s) | 962, 1405 |
| MspR9I | CCNGG | 1 cut(s) | 456 |
| MunI | CAATTG | 1 cut(s) | 397 |
| MvaI | CCWGG | 1 cut(s) | 456 |
| MvnI | CGCG | 1 cut(s) | 1166 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 288 |
| NcoI | CCATGG | 2 cut(s) | 341, 444 |
| NdeII | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| NlaIV | GGNNCC | 3 cut(s) | 500, 501, 1090 |
| NmeAIII | GCCGAG | 1 cut(s) | 856 |
| NmuCI | GTSAC | 3 cut(s) | 513, 781, 885 |
| NruI | TCGCGA | 1 cut(s) | 1166 |
| NsiI | ATGCAT | 1 cut(s) | 1502 |
| NspI | RCATGY | 3 cut(s) | 157, 1500, 1504 |
| OliI | CACNNNNGTG | 1 cut(s) | 1373 |
| PaeI | GCATGC | 1 cut(s) | 1504 |
| PagI | TCATGA | 1 cut(s) | 379 |
| PciI | ACATGT | 1 cut(s) | 153 |
| PciSI | GCTCTTC | 1 cut(s) | 1458 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 201, 486 |
| PdmI | GAANNNNTTC | 2 cut(s) | 109, 1284 |
| PfeI | GAWTC | 1 cut(s) | 37 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 342, 1259 |
| PkrI | GCNGC | 4 cut(s) | 175, 284, 318, 775 |
| PleI | GAGTC | 1 cut(s) | 892 |
| PpsI | GAGTC | 1 cut(s) | 892 |
| PpuMI | RGGWCCY | 2 cut(s) | 452, 499 |
| PscI | ACATGT | 1 cut(s) | 153 |
| Psp124BI | GAGCTC | 1 cut(s) | 1470 |
| Psp1406I | AACGTT | 2 cut(s) | 489, 824 |
| Psp5II | RGGWCCY | 2 cut(s) | 452, 499 |
| Psp6I | CCWGG | 1 cut(s) | 454 |
| PspFI | CCCAGC | 1 cut(s) | 616 |
| PspGI | CCWGG | 1 cut(s) | 454 |
| PspN4I | GGNNCC | 3 cut(s) | 500, 501, 1090 |
| PspPI | GGNCC | 2 cut(s) | 452, 499 |
| PspPPI | RGGWCCY | 2 cut(s) | 452, 499 |
| PstI | CTGCAG | 1 cut(s) | 1079 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1519 |
| PsuI | RGATCY | 2 cut(s) | 800, 1248 |
| PvuII | CAGCTG | 1 cut(s) | 620 |
| RruI | TCGCGA | 1 cut(s) | 1166 |
| RsaI | GTAC | 3 cut(s) | 656, 755, 941 |
| RsaNI | GTAC | 3 cut(s) | 655, 754, 940 |
| RseI | CAYNNNNRTG | 3 cut(s) | 866, 1373, 1418 |
| SacI | GAGCTC | 1 cut(s) | 1470 |
| SapI | GCTCTTC | 1 cut(s) | 1458 |
| SaqAI | TTAA | 7 cut(s) | 81, 554, 630, 689, 710, 852, 1395 |
| SatI | GCNGC | 4 cut(s) | 174, 283, 317, 774 |
| Sau3AI | GATC | 5 cut(s) | 800, 835, 1167, 1232, 1248 |
| Sau96I | GGNCC | 2 cut(s) | 452, 499 |
| ScaI | AGTACT | 1 cut(s) | 941 |
| SchI | GAGTC | 1 cut(s) | 893 |
| ScrFI | CCNGG | 1 cut(s) | 456 |
| SduI | GDGCHC | 2 cut(s) | 646, 1470 |
| SfcI | CTRYAG | 1 cut(s) | 1075 |
| SinI | GGWCC | 2 cut(s) | 452, 499 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 866, 1373, 1418 |
| SmlI | CTYRAG | 1 cut(s) | 881 |
| SmoI | CTYRAG | 1 cut(s) | 881 |
| SphI | GCATGC | 1 cut(s) | 1504 |
| SsiI | CCGC | 1 cut(s) | 1570 |
| SspI | AATATT | 1 cut(s) | 1010 |
| SspMI | CTAG | 1 cut(s) | 252 |
| SstI | GAGCTC | 1 cut(s) | 1470 |
| StyD4I | CCNGG | 1 cut(s) | 454 |
| StyI | CCWWGG | 2 cut(s) | 341, 444 |
| TaaI | ACNGT | 6 cut(s) | 225, 654, 701, 808, 1420, 1548 |
| TaiI | ACGT | 3 cut(s) | 492, 827, 927 |
| TaqI | TCGA | 2 cut(s) | 591, 1231 |
| TatI | WGTACW | 1 cut(s) | 939 |
| TfiI | GAWTC | 1 cut(s) | 37 |
| Tru1I | TTAA | 7 cut(s) | 81, 554, 630, 689, 710, 852, 1395 |
| Tru9I | TTAA | 7 cut(s) | 81, 554, 630, 689, 710, 852, 1395 |
| TscAI | CASTG | 5 cut(s) | 811, 894, 1084, 1090, 1493 |
| TseFI | GTSAC | 3 cut(s) | 513, 781, 885 |
| TseI | GCWGC | 4 cut(s) | 173, 282, 316, 773 |
| Tsp45I | GTSAC | 3 cut(s) | 513, 781, 885 |
| TspDTI | ATGAA | 7 cut(s) | 276, 368, 658, 776, 1271, 1293, 1300 |
| TspRI | CASTG | 5 cut(s) | 811, 894, 1084, 1090, 1493 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 342, 1259 |
| VpaK11BI | GGWCC | 2 cut(s) | 452, 499 |
| XceI | RCATGY | 3 cut(s) | 157, 1500, 1504 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 343 |
| XmiI | GTMKAC | 1 cut(s) | 649 |
| XmnI | GAANNNNTTC | 2 cut(s) | 109, 1284 |
| XspI | CTAG | 1 cut(s) | 252 |
| ZrmI | AGTACT | 1 cut(s) | 941 |
| Zsp2I | ATGCAT | 1 cut(s) | 1502 |