TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 46 - 150 | 2.4e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 51 - 257 | 2.9e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 163 - 241 | 4e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 308 - 448 | 2.5e-18 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1433 |
| AccB1I | GGYRCC | 1 cut(s) | 681 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 964 |
| AccBSI | CCGCTC | 3 cut(s) | 679, 1060, 1263 |
| AccII | CGCG | 1 cut(s) | 1116 |
| AciI | CCGC | 4 cut(s) | 404, 679, 1058, 1261 |
| AclI | AACGTT | 1 cut(s) | 758 |
| AclWI | GGATC | 2 cut(s) | 534, 1170 |
| AcoI | YGGCCR | 3 cut(s) | 643, 762, 1258 |
| AcsI | RAATTY | 3 cut(s) | 784, 802, 1106 |
| AcuI | CTGAAG | 1 cut(s) | 570 |
| AfaI | GTAC | 2 cut(s) | 950, 1199 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 964 |
| AjnI | CCWGG | 3 cut(s) | 631, 925, 994 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1091, 1123 |
| AleI | CACNNNNGTG | 1 cut(s) | 960 |
| AluBI | AGCT | 9 cut(s) | 193, 265, 313, 691, 709, 988, 1234, 1348, 1451 |
| AluI | AGCT | 9 cut(s) | 193, 265, 313, 691, 709, 988, 1234, 1348, 1451 |
| Alw21I | GWGCWC | 1 cut(s) | 1188 |
| Alw44I | GTGCAC | 1 cut(s) | 1184 |
| AlwI | GGATC | 2 cut(s) | 534, 1170 |
| AoxI | GGCC | 4 cut(s) | 643, 762, 1258, 1399 |
| ApaLI | GTGCAC | 1 cut(s) | 1184 |
| ApeKI | GCWGC | 3 cut(s) | 4, 988, 1427 |
| ApoI | RAATTY | 3 cut(s) | 784, 802, 1106 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 448, 480 |
| AseI | ATTAAT | 2 cut(s) | 30, 1386 |
| AspLEI | GCGC | 1 cut(s) | 1116 |
| AspS9I | GGNCC | 1 cut(s) | 1315 |
| AsuHPI | GGTGA | 4 cut(s) | 402, 947, 1148, 1466 |
| AsuNHI | GCTAGC | 1 cut(s) | 734 |
| AvaII | GGWCC | 1 cut(s) | 1315 |
| BaeGI | GKGCMC | 2 cut(s) | 348, 1188 |
| BalI | TGGCCA | 1 cut(s) | 764 |
| BanI | GGYRCC | 1 cut(s) | 681 |
| BbsI | GAAGAC | 3 cut(s) | 194, 576, 963 |
| Bbv12I | GWGCWC | 1 cut(s) | 1188 |
| BbvI | GCAGC | 3 cut(s) | 16, 975, 1439 |
| BccI | CCATC | 1 cut(s) | 721 |
| BceAI | ACGGC | 1 cut(s) | 1273 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1076, 1110 |
| BciT130I | CCWGG | 3 cut(s) | 633, 927, 996 |
| BfaI | CTAG | 3 cut(s) | 654, 735, 1434 |
| BfuAI | ACCTGC | 1 cut(s) | 1433 |
| BglII | AGATCT | 1 cut(s) | 238 |
| BisI | GCNGC | 4 cut(s) | 5, 989, 1261, 1428 |
| BlsI | GCNGC | 4 cut(s) | 6, 990, 1262, 1429 |
| Bme1390I | CCNGG | 3 cut(s) | 633, 927, 996 |
| Bme18I | GGWCC | 1 cut(s) | 1315 |
| BmgT120I | GGNCC | 1 cut(s) | 1315 |
| BmiI | GGNNCC | 2 cut(s) | 683, 1316 |
| BmrFI | CCNGG | 3 cut(s) | 633, 927, 996 |
| BmrI | ACTGGG | 1 cut(s) | 558 |
| BmsI | GCATC | 5 cut(s) | 566, 648, 1000, 1414, 1439 |
| BmtI | GCTAGC | 1 cut(s) | 738 |
| BmuI | ACTGGG | 1 cut(s) | 558 |
| BpiI | GAAGAC | 3 cut(s) | 194, 576, 963 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 28, 60 |
| BpuEI | CTTGAG | 1 cut(s) | 1088 |
| Bsa29I | ATCGAT | 1 cut(s) | 1281 |
| BsaBI | GATNNNNATC | 1 cut(s) | 243 |
| BsaJI | CCNNGG | 2 cut(s) | 632, 1477 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 83, 113 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 964 |
| Bse1I | ACTGG | 2 cut(s) | 528, 564 |
| Bse3DI | GCAATG | 2 cut(s) | 564, 860 |
| Bse8I | GATNNNNATC | 1 cut(s) | 243 |
| BseBI | CCWGG | 3 cut(s) | 633, 927, 996 |
| BseCI | ATCGAT | 1 cut(s) | 1281 |
| BseDI | CCNNGG | 2 cut(s) | 632, 1477 |
| BseGI | GGATG | 4 cut(s) | 401, 581, 991, 1453 |
| BseJI | GATNNNNATC | 1 cut(s) | 243 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 964 |
| BseMI | GCAATG | 2 cut(s) | 564, 860 |
| BseMII | CTCAG | 3 cut(s) | 26, 926, 1082 |
| BseNI | ACTGG | 2 cut(s) | 528, 564 |
| BseRI | GAGGAG | 3 cut(s) | 340, 1040, 1358 |
| BseSI | GKGCMC | 2 cut(s) | 348, 1188 |
| BseX3I | CGGCCG | 1 cut(s) | 1258 |
| BseXI | GCAGC | 3 cut(s) | 16, 975, 1439 |
| BsgI | GTGCAG | 1 cut(s) | 1461 |
| Bsh1236I | CGCG | 1 cut(s) | 1116 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1261 |
| BshFI | GGCC | 4 cut(s) | 645, 764, 1260, 1401 |
| BshNI | GGYRCC | 1 cut(s) | 681 |
| BshVI | ATCGAT | 1 cut(s) | 1281 |
| BsiEI | CGRYCG | 1 cut(s) | 1261 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1188 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 964 |
| BsmI | GAATGC | 1 cut(s) | 508 |
| BsnI | GGCC | 4 cut(s) | 645, 764, 1260, 1401 |
| Bsp1286I | GDGCHC | 2 cut(s) | 348, 1188 |
| Bsp143I | GATC | 3 cut(s) | 238, 526, 1162 |
| BspACI | CCGC | 4 cut(s) | 404, 679, 1058, 1261 |
| BspANI | GGCC | 4 cut(s) | 645, 764, 1260, 1401 |
| BspCNI | CTCAG | 3 cut(s) | 27, 925, 1083 |
| BspDI | ATCGAT | 1 cut(s) | 1281 |
| BspFNI | CGCG | 1 cut(s) | 1116 |
| BspLI | GGNNCC | 2 cut(s) | 683, 1316 |
| BspMI | ACCTGC | 1 cut(s) | 1433 |
| BspOI | GCTAGC | 1 cut(s) | 738 |
| BspPI | GGATC | 2 cut(s) | 534, 1170 |
| BspT107I | GGYRCC | 1 cut(s) | 681 |
| BsrBI | CCGCTC | 3 cut(s) | 679, 1060, 1263 |
| BsrDI | GCAATG | 2 cut(s) | 564, 860 |
| BsrI | ACTGG | 2 cut(s) | 528, 564 |
| BssECI | CCNNGG | 2 cut(s) | 632, 1477 |
| BssMI | GATC | 3 cut(s) | 238, 526, 1162 |
| Bst2UI | CCWGG | 3 cut(s) | 633, 927, 996 |
| Bst4CI | ACNGT | 4 cut(s) | 166, 815, 982, 1190 |
| Bst6I | CTCTTC | 1 cut(s) | 1134 |
| BstC8I | GCNNGC | 1 cut(s) | 736 |
| BstDEI | CTNAG | 5 cut(s) | 35, 530, 605, 912, 1091 |
| BstDSI | CCRYGG | 1 cut(s) | 1477 |
| BstF5I | GGATG | 4 cut(s) | 401, 581, 991, 1453 |
| BstFNI | CGCG | 1 cut(s) | 1116 |
| BstHHI | GCGC | 1 cut(s) | 1116 |
| BstKTI | GATC | 3 cut(s) | 241, 529, 1165 |
| BstMBI | GATC | 3 cut(s) | 238, 526, 1162 |
| BstMCI | CGRYCG | 1 cut(s) | 1261 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1448 |
| BstNI | CCWGG | 3 cut(s) | 633, 927, 996 |
| BstSCI | CCNGG | 3 cut(s) | 631, 925, 994 |
| BstSLI | GKGCMC | 2 cut(s) | 348, 1188 |
| BstUI | CGCG | 1 cut(s) | 1116 |
| BstV1I | GCAGC | 3 cut(s) | 16, 975, 1439 |
| BstV2I | GAAGAC | 3 cut(s) | 194, 576, 963 |
| BstX2I | RGATCY | 2 cut(s) | 238, 526 |
| BstYI | RGATCY | 2 cut(s) | 238, 526 |
| BstZI | CGGCCG | 1 cut(s) | 1258 |
| Bsu15I | ATCGAT | 1 cut(s) | 1281 |
| BsuRI | GGCC | 4 cut(s) | 645, 764, 1260, 1401 |
| BsuTUI | ATCGAT | 1 cut(s) | 1281 |
| BtgI | CCRYGG | 1 cut(s) | 1477 |
| BtsCI | GGATG | 4 cut(s) | 401, 581, 991, 1453 |
| BtsI | GCAGTG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 3 cut(s) | 217, 571, 795 |
| BveI | ACCTGC | 1 cut(s) | 1433 |
| Cac8I | GCNNGC | 1 cut(s) | 736 |
| CfoI | GCGC | 1 cut(s) | 1116 |
| Cfr13I | GGNCC | 1 cut(s) | 1315 |
| ClaI | ATCGAT | 1 cut(s) | 1281 |
| CseI | GACGC | 1 cut(s) | 188 |
| Csp6I | GTAC | 2 cut(s) | 949, 1198 |
| CviAII | CATG | 4 cut(s) | 293, 420, 719, 1485 |
| CviQI | GTAC | 2 cut(s) | 949, 1198 |
| DdeI | CTNAG | 5 cut(s) | 35, 530, 605, 912, 1091 |
| DpnI | GATC | 3 cut(s) | 240, 528, 1164 |
| DpnII | GATC | 3 cut(s) | 238, 526, 1162 |
| DraI | TTTAAA | 2 cut(s) | 73, 1249 |
| EaeI | YGGCCR | 3 cut(s) | 643, 762, 1258 |
| EagI | CGGCCG | 1 cut(s) | 1258 |
| Eam1104I | CTCTTC | 1 cut(s) | 1134 |
| EarI | CTCTTC | 1 cut(s) | 1134 |
| EclXI | CGGCCG | 1 cut(s) | 1258 |
| Eco147I | AGGCCT | 1 cut(s) | 1401 |
| Eco32I | GATATC | 1 cut(s) | 1222 |
| Eco47I | GGWCC | 1 cut(s) | 1315 |
| Eco52I | CGGCCG | 1 cut(s) | 1258 |
| Eco57I | CTGAAG | 1 cut(s) | 570 |
| EcoRI | GAATTC | 1 cut(s) | 784 |
| EcoRII | CCWGG | 3 cut(s) | 631, 925, 994 |
| EcoRV | GATATC | 1 cut(s) | 1222 |
| FaeI | CATG | 4 cut(s) | 296, 423, 722, 1488 |
| FatI | CATG | 4 cut(s) | 292, 419, 718, 1484 |
| Fnu4HI | GCNGC | 4 cut(s) | 5, 989, 1261, 1428 |
| FokI | GGATG | 4 cut(s) | 408, 588, 978, 1440 |
| Fsp4HI | GCNGC | 4 cut(s) | 5, 989, 1261, 1428 |
| FspBI | CTAG | 3 cut(s) | 654, 735, 1434 |
| GlaI | GCGC | 1 cut(s) | 1115 |
| GluI | GCNGC | 4 cut(s) | 5, 989, 1261, 1428 |
| HaeIII | GGCC | 4 cut(s) | 645, 764, 1260, 1401 |
| HgaI | GACGC | 1 cut(s) | 188 |
| HhaI | GCGC | 1 cut(s) | 1116 |
| Hin1II | CATG | 4 cut(s) | 296, 423, 722, 1488 |
| Hin6I | GCGC | 1 cut(s) | 1114 |
| HinP1I | GCGC | 1 cut(s) | 1114 |
| HincII | GTYRAC | 4 cut(s) | 58, 133, 811, 1151 |
| HindII | GTYRAC | 4 cut(s) | 58, 133, 811, 1151 |
| HindIII | AAGCTT | 4 cut(s) | 191, 263, 311, 689 |
| HinfI | GANTC | 5 cut(s) | 37, 49, 1023, 1047, 1278 |
| HpaI | GTTAAC | 1 cut(s) | 811 |
| HphI | GGTGA | 4 cut(s) | 402, 947, 1148, 1466 |
| Hpy166II | GTNNAC | 7 cut(s) | 58, 133, 401, 730, 811, 1151, 1186 |
| Hpy188I | TCNGA | 5 cut(s) | 36, 48, 550, 696, 1354 |
| Hpy188III | TCNNGA | 1 cut(s) | 104 |
| Hpy8I | GTNNAC | 7 cut(s) | 58, 133, 401, 730, 811, 1151, 1186 |
| Hpy99I | CGWCG | 1 cut(s) | 1194 |
| HpyAV | CCTTC | 4 cut(s) | 101, 791, 1039, 1412 |
| HpyCH4III | ACNGT | 4 cut(s) | 166, 815, 982, 1190 |
| HpyCH4IV | ACGT | 1 cut(s) | 758 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1448 |
| HpyF3I | CTNAG | 5 cut(s) | 35, 530, 605, 912, 1091 |
| HpySE526I | ACGT | 1 cut(s) | 758 |
| Hsp92II | CATG | 4 cut(s) | 296, 423, 722, 1488 |
| HspAI | GCGC | 1 cut(s) | 1114 |
| KspAI | GTTAAC | 1 cut(s) | 811 |
| Kzo9I | GATC | 3 cut(s) | 238, 526, 1162 |
| LmnI | GCTCC | 4 cut(s) | 636, 676, 878, 1345 |
| Lsp1109I | GCAGC | 3 cut(s) | 16, 975, 1439 |
| LweI | GCATC | 5 cut(s) | 566, 648, 1000, 1414, 1439 |
| MaeI | CTAG | 3 cut(s) | 654, 735, 1434 |
| MaeII | ACGT | 1 cut(s) | 758 |
| MaeIII | GTNAC | 5 cut(s) | 38, 408, 464, 533, 1007 |
| MalI | GATC | 3 cut(s) | 240, 528, 1164 |
| MbiI | CCGCTC | 3 cut(s) | 679, 1060, 1263 |
| MboI | GATC | 3 cut(s) | 238, 526, 1162 |
| MboII | GAAGA | 8 cut(s) | 194, 563, 576, 659, 963, 1151, 1315, 1346 |
| MfeI | CAATTG | 1 cut(s) | 141 |
| MflI | RGATCY | 2 cut(s) | 238, 526 |
| MhlI | GDGCHC | 2 cut(s) | 348, 1188 |
| MlsI | TGGCCA | 1 cut(s) | 764 |
| MluNI | TGGCCA | 1 cut(s) | 764 |
| MlyI | GAGTC | 2 cut(s) | 46, 1041 |
| MmeI | TCCRAC | 1 cut(s) | 1140 |
| MnlI | CCTC | 9 cut(s) | 121, 358, 361, 383, 1061, 1279, 1324, 1336, 1391 |
| Mox20I | TGGCCA | 1 cut(s) | 764 |
| MscI | TGGCCA | 1 cut(s) | 764 |
| MslI | CAYNNNNRTG | 2 cut(s) | 960, 1413 |
| Msp20I | TGGCCA | 1 cut(s) | 764 |
| MspR9I | CCNGG | 3 cut(s) | 633, 927, 996 |
| MunI | CAATTG | 1 cut(s) | 141 |
| Mva1269I | GAATGC | 1 cut(s) | 508 |
| MvaI | CCWGG | 3 cut(s) | 633, 927, 996 |
| MvnI | CGCG | 1 cut(s) | 1116 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1448 |
| NdeII | GATC | 3 cut(s) | 238, 526, 1162 |
| NheI | GCTAGC | 1 cut(s) | 734 |
| NlaIII | CATG | 4 cut(s) | 296, 423, 722, 1488 |
| NlaIV | GGNNCC | 2 cut(s) | 683, 1316 |
| NmuCI | GTSAC | 4 cut(s) | 38, 408, 464, 533 |
| OliI | CACNNNNGTG | 1 cut(s) | 960 |
| PceI | AGGCCT | 1 cut(s) | 1401 |
| PctI | GAATGC | 1 cut(s) | 508 |
| PfeI | GAWTC | 3 cut(s) | 49, 1023, 1278 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 964 |
| PfoI | TCCNGGA | 1 cut(s) | 925 |
| PkrI | GCNGC | 4 cut(s) | 6, 990, 1262, 1429 |
| PleI | GAGTC | 2 cut(s) | 45, 1041 |
| PpsI | GAGTC | 2 cut(s) | 45, 1041 |
| PshBI | ATTAAT | 2 cut(s) | 30, 1386 |
| Psp1406I | AACGTT | 1 cut(s) | 758 |
| Psp6I | CCWGG | 3 cut(s) | 631, 925, 994 |
| PspGI | CCWGG | 3 cut(s) | 631, 925, 994 |
| PspN4I | GGNNCC | 2 cut(s) | 683, 1316 |
| PspPI | GGNCC | 1 cut(s) | 1315 |
| PsuI | RGATCY | 2 cut(s) | 238, 526 |
| RsaI | GTAC | 2 cut(s) | 950, 1199 |
| RsaNI | GTAC | 2 cut(s) | 949, 1198 |
| RseI | CAYNNNNRTG | 2 cut(s) | 960, 1413 |
| SatI | GCNGC | 4 cut(s) | 5, 989, 1261, 1428 |
| Sau3AI | GATC | 3 cut(s) | 238, 526, 1162 |
| Sau96I | GGNCC | 1 cut(s) | 1315 |
| SchI | GAGTC | 2 cut(s) | 46, 1041 |
| ScrFI | CCNGG | 3 cut(s) | 633, 927, 996 |
| SduI | GDGCHC | 2 cut(s) | 348, 1188 |
| SfaNI | GCATC | 5 cut(s) | 566, 648, 1000, 1414, 1439 |
| SinI | GGWCC | 1 cut(s) | 1315 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 960, 1413 |
| SmlI | CTYRAG | 1 cut(s) | 1067 |
| SmoI | CTYRAG | 1 cut(s) | 1067 |
| SseBI | AGGCCT | 1 cut(s) | 1401 |
| SsiI | CCGC | 4 cut(s) | 404, 679, 1058, 1261 |
| SspMI | CTAG | 3 cut(s) | 654, 735, 1434 |
| StuI | AGGCCT | 1 cut(s) | 1401 |
| StyD4I | CCNGG | 3 cut(s) | 631, 925, 994 |
| TaaI | ACNGT | 4 cut(s) | 166, 815, 982, 1190 |
| TaiI | ACGT | 1 cut(s) | 761 |
| TaqI | TCGA | 3 cut(s) | 974, 1265, 1281 |
| TauI | GCSGC | 1 cut(s) | 1263 |
| TfiI | GAWTC | 3 cut(s) | 49, 1023, 1278 |
| TscAI | CASTG | 3 cut(s) | 217, 571, 795 |
| TseFI | GTSAC | 4 cut(s) | 38, 408, 464, 533 |
| TseI | GCWGC | 3 cut(s) | 4, 988, 1427 |
| Tsp45I | GTSAC | 4 cut(s) | 38, 408, 464, 533 |
| TspDTI | ATGAA | 5 cut(s) | 501, 738, 849, 849, 948 |
| TspGWI | ACGGA | 2 cut(s) | 796, 1307 |
| TspRI | CASTG | 3 cut(s) | 217, 571, 795 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 964 |
| VneI | GTGCAC | 1 cut(s) | 1184 |
| VpaK11BI | GGWCC | 1 cut(s) | 1315 |
| VspI | ATTAAT | 2 cut(s) | 30, 1386 |
| XapI | RAATTY | 3 cut(s) | 784, 802, 1106 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 720 |
| XspI | CTAG | 3 cut(s) | 654, 735, 1434 |