TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_8 | PF13855 | 11 - 69 | 4.6e-09 | Leucine rich repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 284 |
| AccB1I | GGYRCC | 1 cut(s) | 284 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 317 |
| AciI | CCGC | 1 cut(s) | 19 |
| AclWI | GGATC | 2 cut(s) | 123, 220 |
| AcsI | RAATTY | 2 cut(s) | 381, 485 |
| AfaI | GTAC | 1 cut(s) | 286 |
| AfeI | AGCGCT | 1 cut(s) | 499 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 317 |
| AflII | CTTAAG | 1 cut(s) | 455 |
| AgsI | TTSAA | 5 cut(s) | 43, 187, 247, 263, 484 |
| AluBI | AGCT | 3 cut(s) | 28, 182, 235 |
| AluI | AGCT | 3 cut(s) | 28, 182, 235 |
| AlwI | GGATC | 2 cut(s) | 123, 220 |
| Aor51HI | AGCGCT | 1 cut(s) | 499 |
| ApeKI | GCWGC | 1 cut(s) | 69 |
| ApoI | RAATTY | 2 cut(s) | 381, 485 |
| Asp718I | GGTACC | 1 cut(s) | 284 |
| AspLEI | GCGC | 1 cut(s) | 500 |
| BanI | GGYRCC | 1 cut(s) | 284 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BccI | CCATC | 1 cut(s) | 157 |
| BfoI | RGCGCY | 1 cut(s) | 501 |
| BfrI | CTTAAG | 1 cut(s) | 455 |
| BisI | GCNGC | 1 cut(s) | 70 |
| BlsI | GCNGC | 1 cut(s) | 71 |
| BmiI | GGNNCC | 3 cut(s) | 269, 286, 512 |
| BmsI | GCATC | 1 cut(s) | 379 |
| BpuEI | CTTGAG | 2 cut(s) | 80, 486 |
| Bsa29I | ATCGAT | 1 cut(s) | 215 |
| BsaJI | CCNNGG | 1 cut(s) | 386 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 15, 45, 47, 77 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 317 |
| Bse1I | ACTGG | 1 cut(s) | 142 |
| BseCI | ATCGAT | 1 cut(s) | 215 |
| BseDI | CCNNGG | 1 cut(s) | 386 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 317 |
| BseMII | CTCAG | 1 cut(s) | 245 |
| BseNI | ACTGG | 1 cut(s) | 142 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BshNI | GGYRCC | 1 cut(s) | 284 |
| BshVI | ATCGAT | 1 cut(s) | 215 |
| BsiSI | CCGG | 1 cut(s) | 66 |
| BslFI | GGGAC | 1 cut(s) | 241 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 317 |
| BsmFI | GGGAC | 1 cut(s) | 241 |
| BsmI | GAATGC | 2 cut(s) | 72, 253 |
| Bsp143I | GATC | 2 cut(s) | 115, 212 |
| Bsp19I | CCATGG | 1 cut(s) | 386 |
| BspACI | CCGC | 1 cut(s) | 19 |
| BspCNI | CTCAG | 1 cut(s) | 244 |
| BspDI | ATCGAT | 1 cut(s) | 215 |
| BspLI | GGNNCC | 3 cut(s) | 269, 286, 512 |
| BspPI | GGATC | 2 cut(s) | 123, 220 |
| BspT107I | GGYRCC | 1 cut(s) | 284 |
| BspTI | CTTAAG | 1 cut(s) | 455 |
| BsrI | ACTGG | 1 cut(s) | 142 |
| BssECI | CCNNGG | 1 cut(s) | 386 |
| BssMI | GATC | 2 cut(s) | 115, 212 |
| BssT1I | CCWWGG | 1 cut(s) | 386 |
| Bst4CI | ACNGT | 1 cut(s) | 406 |
| BstAFI | CTTAAG | 1 cut(s) | 455 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstDSI | CCRYGG | 1 cut(s) | 386 |
| BstH2I | RGCGCY | 1 cut(s) | 501 |
| BstHHI | GCGC | 1 cut(s) | 500 |
| BstKTI | GATC | 2 cut(s) | 118, 215 |
| BstMBI | GATC | 2 cut(s) | 115, 212 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| BstX2I | RGATCY | 1 cut(s) | 115 |
| BstYI | RGATCY | 1 cut(s) | 115 |
| Bsu15I | ATCGAT | 1 cut(s) | 215 |
| BsuTUI | ATCGAT | 1 cut(s) | 215 |
| BtgI | CCRYGG | 1 cut(s) | 386 |
| BtsIMutI | CAGTG | 1 cut(s) | 402 |
| CfoI | GCGC | 1 cut(s) | 500 |
| ClaI | ATCGAT | 1 cut(s) | 215 |
| Csp6I | GTAC | 1 cut(s) | 285 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 391, 426 |
| CviAII | CATG | 2 cut(s) | 35, 387 |
| CviJI | RGCY | 6 cut(s) | 28, 69, 166, 182, 235, 511 |
| CviKI_1 | RGCY | 6 cut(s) | 28, 69, 166, 182, 235, 511 |
| CviQI | GTAC | 1 cut(s) | 285 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 2 cut(s) | 117, 214 |
| DpnII | GATC | 2 cut(s) | 115, 212 |
| Eco130I | CCWWGG | 1 cut(s) | 386 |
| Eco32I | GATATC | 1 cut(s) | 87 |
| Eco47III | AGCGCT | 1 cut(s) | 499 |
| EcoRV | GATATC | 1 cut(s) | 87 |
| EcoT14I | CCWWGG | 1 cut(s) | 386 |
| ErhI | CCWWGG | 1 cut(s) | 386 |
| FaeI | CATG | 2 cut(s) | 38, 390 |
| FaiI | YATR | 6 cut(s) | 36, 196, 341, 388, 474, 540 |
| FaqI | GGGAC | 1 cut(s) | 241 |
| FatI | CATG | 2 cut(s) | 34, 386 |
| Fnu4HI | GCNGC | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 1 cut(s) | 70 |
| GlaI | GCGC | 1 cut(s) | 499 |
| GluI | GCNGC | 1 cut(s) | 70 |
| HaeII | RGCGCY | 1 cut(s) | 501 |
| HapII | CCGG | 1 cut(s) | 66 |
| HhaI | GCGC | 1 cut(s) | 500 |
| Hin1II | CATG | 2 cut(s) | 38, 390 |
| Hin6I | GCGC | 1 cut(s) | 498 |
| HinP1I | GCGC | 1 cut(s) | 498 |
| HincII | GTYRAC | 1 cut(s) | 308 |
| HindII | GTYRAC | 1 cut(s) | 308 |
| HinfI | GANTC | 2 cut(s) | 43, 229 |
| HpaII | CCGG | 1 cut(s) | 66 |
| Hpy166II | GTNNAC | 2 cut(s) | 135, 308 |
| Hpy188III | TCNNGA | 4 cut(s) | 77, 97, 123, 503 |
| Hpy8I | GTNNAC | 2 cut(s) | 135, 308 |
| HpyAV | CCTTC | 1 cut(s) | 257 |
| HpyCH4III | ACNGT | 1 cut(s) | 406 |
| HpyCH4V | TGCA | 4 cut(s) | 51, 72, 257, 332 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| Hsp92II | CATG | 2 cut(s) | 38, 390 |
| HspAI | GCGC | 1 cut(s) | 498 |
| KpnI | GGTACC | 1 cut(s) | 288 |
| Kzo9I | GATC | 2 cut(s) | 115, 212 |
| LmnI | GCTCC | 2 cut(s) | 240, 516 |
| LpnPI | CCDG | 6 cut(s) | 79, 90, 123, 136, 195, 358 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| LweI | GCATC | 1 cut(s) | 379 |
| MalI | GATC | 2 cut(s) | 117, 214 |
| MboI | GATC | 2 cut(s) | 115, 212 |
| MboII | GAAGA | 1 cut(s) | 472 |
| MfeI | CAATTG | 1 cut(s) | 544 |
| MflI | RGATCY | 1 cut(s) | 115 |
| MluCI | AATT | 8 cut(s) | 110, 141, 156, 169, 381, 485, 525, 544 |
| MlyI | GAGTC | 1 cut(s) | 223 |
| MmeI | TCCRAC | 1 cut(s) | 262 |
| MnlI | CCTC | 3 cut(s) | 100, 104, 218 |
| MseI | TTAA | 1 cut(s) | 456 |
| MspCI | CTTAAG | 1 cut(s) | 455 |
| MspI | CCGG | 1 cut(s) | 66 |
| MunI | CAATTG | 1 cut(s) | 544 |
| Mva1269I | GAATGC | 2 cut(s) | 72, 253 |
| NcoI | CCATGG | 1 cut(s) | 386 |
| NdeII | GATC | 2 cut(s) | 115, 212 |
| NlaIII | CATG | 2 cut(s) | 38, 390 |
| NlaIV | GGNNCC | 3 cut(s) | 269, 286, 512 |
| PctI | GAATGC | 2 cut(s) | 72, 253 |
| PfeI | GAWTC | 1 cut(s) | 43 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 317 |
| PkrI | GCNGC | 1 cut(s) | 71 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| PspN4I | GGNNCC | 3 cut(s) | 269, 286, 512 |
| PsuI | RGATCY | 1 cut(s) | 115 |
| RsaI | GTAC | 1 cut(s) | 286 |
| RsaNI | GTAC | 1 cut(s) | 285 |
| SaqAI | TTAA | 1 cut(s) | 456 |
| SatI | GCNGC | 1 cut(s) | 70 |
| Sau3AI | GATC | 2 cut(s) | 115, 212 |
| SchI | GAGTC | 1 cut(s) | 223 |
| SetI | ASST | 4 cut(s) | 30, 96, 184, 237 |
| SfaNI | GCATC | 1 cut(s) | 379 |
| SmlI | CTYRAG | 3 cut(s) | 95, 455, 501 |
| SmoI | CTYRAG | 3 cut(s) | 95, 455, 501 |
| Sse9I | AATT | 8 cut(s) | 110, 141, 156, 169, 381, 485, 525, 544 |
| SsiI | CCGC | 1 cut(s) | 19 |
| StyI | CCWWGG | 1 cut(s) | 386 |
| TaaI | ACNGT | 1 cut(s) | 406 |
| TaqI | TCGA | 1 cut(s) | 215 |
| TasI | AATT | 8 cut(s) | 110, 141, 156, 169, 381, 485, 525, 544 |
| TfiI | GAWTC | 1 cut(s) | 43 |
| Tru1I | TTAA | 1 cut(s) | 456 |
| Tru9I | TTAA | 1 cut(s) | 456 |
| TscAI | CASTG | 1 cut(s) | 409 |
| TseI | GCWGC | 1 cut(s) | 69 |
| TspDTI | ATGAA | 2 cut(s) | 183, 406 |
| TspRI | CASTG | 1 cut(s) | 409 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 317 |
| Vha464I | CTTAAG | 1 cut(s) | 455 |
| XapI | RAATTY | 2 cut(s) | 381, 485 |