Rorug01G0040400
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
6594164 .. 6597505
3342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0040400.1

Sequence Viewer

Length: 945 bp
ATGGCATCCCTCATTACTCCTGATCAATTTTCTGCTAACCAAGATGCAGAGGCTCTCCGAAAGGCGTGTCAAGGATGGGGGACTAATGAGAAGGCTATCATCTCCATCCTGGGTCGTAGAAATGCATGTCAAAGAAAAGAGATCAGGGCAGCTTATGAGCAACTTTATCAAGAAGATCTTATCAAGCGCCTTGAGTCTGAGCTCTCTGGGGATTTTGAGAGAGCGGTGTACCGTTGGATATTGGATCCAGCAGATCGTGATGCAGTTTTGGCTAATGTGGCCATCAAGAAATCCAACACTGACTACAATGTCATCATAGAAATGTCCTGCGTTCACTCTCCTGAAGAGCTCCTAGCTGTAAGAAGAGCTTACCAGCTTCGCTACAAGCACTCGTTGGAAGAAGATCTAGCTGCACATACCACCGGTGATATGCGCAAGCTTTTGGTTGCTTTGGTGACTGCTTACCGTTATGACGGTAACGAGATCAATGCAAAGTTGGCAAATTCAGAAGCTGATGTTCTTCACGATGCTATCAAAGACAAGGCTTTCAATCATGAAGAAATTATCAGGATCCTGAGTACAAGGAGCAAGACACAGCTCATGGCTACATTCAACAAATACAGAGATGATCAGGGCATTTCTATCAGCAAGGCTTTGTTGGATGAGGAAGCTAATGATTTCCAGAAGGCATTGCATACAGCCATTCGATGCCTCAATGACCCCAGGAAGTACTTTGAGAAGGTACTTCGCAATGCAATCAAAAGGCTTGGAAGCGATGAGGATGCTCTCACTCGTGTAATTGTTACAAGGGCAGAGAGGGACTTGAGGGACATCAAGGAGGTTTACTACAAGAAGAACAGTGTTCCTCTTGAACAGGCTGTGGCCAAAGACACTTCAGGGGACTACAAGGCCTTCCTCCTTACTCTGTTGGGAAAGGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000779 GO:0000793 GO:0000819 GO:0001932 GO:0001934 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005828 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007088 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009893 GO:0009987 GO:0010562 GO:0010564 GO:0010604 GO:0010965 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019220 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0030071 GO:0030496 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0033674 GO:0034508 GO:0034622 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043515 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045859 GO:0045860 GO:0045937 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0050000 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051233 GO:0051234 GO:0051246 GO:0051247 GO:0051276 GO:0051303 GO:0051305 GO:0051310 GO:0051315 GO:0051338 GO:0051347 GO:0051382 GO:0051383 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051726 GO:0051783 GO:0051983 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0072686 GO:0080090 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099606 GO:0099607 GO:0140014 GO:1901987 GO:1901990 GO:1902099 GO:1902850 GO:1903047 GO:1905818 GO:1990023
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

314

Amino Acids

35.85

Weight (kDa)

6.36

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 14 - 76 2.2e-23 Annexin
Annexin PF00191 87 - 151 8.5e-15 Annexin
Annexin PF00191 170 - 232 9.4e-12 Annexin
Annexin PF00191 244 - 309 2.1e-17 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000007)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17680 AT5G17680
fragaria_vesca FvH4_1g04740 FvH4_1g04740 FvH4_1g04740 FvH4_1g07010 FvH4_1g07020 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11570 FvH4_1g11580 FvH4_1g17862 FvH4_1g22370 FvH4_1g22372 FvH4_1g22377 FvH4_1g22512 FvH4_2g00540 FvH4_2g00541 FvH4_2g00550 FvH4_2g00950 FvH4_2g14320 FvH4_2g14320 FvH4_2g14321 FvH4_3g33030 FvH4_3g33030 FvH4_3g33030 FvH4_3g35620 FvH4_3g35630 FvH4_3g36130 FvH4_3g36131 FvH4_3g36140 FvH4_5g02251 FvH4_6g04060 FvH4_6g04250 FvH4_6g04250 FvH4_6g04250 FvH4_6g04350 FvH4_6g04730 FvH4_6g04730 FvH4_6g05490 FvH4_6g05610 FvH4_6g05610 FvH4_7g12160 FvH4_7g12160 FvH4_7g12160 FvH4_7g21060 FvH4_7g21060 FvH4_7g21060 FvH4_7g21070 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21140 FvH4_7g21150 FvH4_7g21170 FvH4_7g21170 FvH4_7g21171 FvH4_7g21172 FvH4_7g21180 FvH4_7g21201 FvH4_7g21201 FvH4_7g21230 FvH4_7g21230 FvH4_7g21230 FvH4_7g28631 FvH4_7g32440 FvH4_7g32460 FvH4_7g32464 FvH4_7g32470 FvH4_7g32480 FvH4_7g32710 FvH4_7g32720 FvH4_7g32740 FvH4_7g32740 FvH4_7g32740 FvH4_7g32760 FvH4_7g33140
malus_domestica MD00G1125900.v1.1 MD00G1126000.v1.1 MD00G1126100.v1.1 MD04G1054900.v1.1 MD05G1007000.v1.1 MD05G1018900.v1.1 MD05G1019700.v1.1 MD05G1020000.v1.1 MD05G1020100.v1.1 MD05G1022400.v1.1 MD05G1022500.v1.1 MD05G1022600.v1.1 MD05G1022800.v1.1 MD05G1028700.v1.1 MD05G1100200.v1.1 MD08G1021900.v1.1 MD10G1006500.v1.1 MD10G1006900.v1.1 MD10G1007200.v1.1 MD10G1007600.v1.1 MD10G1015300.v1.1 MD10G1018400.v1.1 MD10G1018500.v1.1 MD10G1018900.v1.1 MD10G1019200.v1.1 MD10G1019700.v1.1 MD10G1020000.v1.1 MD10G1020100.v1.1 MD10G1020900.v1.1 MD10G1021000.v1.1 MD10G1034300.v1.1 MD10G1034400.v1.1 MD10G1034700.v1.1 MD10G1034800.v1.1 MD10G1035000.v1.1 MD10G1035400.v1.1 MD10G1232400.v1.1 MD15G1377300.v1.1 MD15G1377400.v1.1
prunus_persica Prupe.1G165300_v2.0.a1 Prupe.1G165300_v2.0.a1 Prupe.1G523900_v2.0.a1 Prupe.1G524000_v2.0.a1 Prupe.1G526300_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.2G059000_v2.0.a1 Prupe.3G169500_v2.0.a1 Prupe.6G109800_v2.0.a1 Prupe.7G026100_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037000_v2.0.a1 Prupe.7G037600_v2.0.a1 Prupe.8G005100_v2.0.a1 Prupe.8G005300_v2.0.a1 Prupe.8G021700_v2.0.a1 Prupe.8G022800_v2.0.a1 Prupe.8G023100_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023200_v2.0.a1 Prupe.8G023300_v2.0.a1 Prupe.8G023500_v2.0.a1 Prupe.8G023600_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023700_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023800_v2.0.a1 Prupe.8G023900_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026500_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026700_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G026800_v2.0.a1 Prupe.8G027000_v2.0.a1 Prupe.8G027100_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G027300_v2.0.a1 Prupe.8G032000_v2.0.a1 Prupe.8G034700_v2.0.a1 Prupe.8G046500_v2.0.a1 Prupe.8G046700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1 Prupe.8G056700_v2.0.a1
pyrus_communis pycom05g01130 pycom05g01150 pycom05g01160 pycom05g01330 pycom05g01340 pycom05g01350 pycom05g01360 pycom05g01390 pycom05g01400 pycom05g01420 pycom05g01430 pycom10g00470 pycom10g00970 pycom10g00980 pycom10g00990 pycom10g01000 pycom10g01340 pycom10g01350 pycom10g01360 pycom10g01390 pycom10g01400 pycom10g01410 pycom10g01420 pycom10g01430 pycom10g02280 pycom10g02300 pycom10g02310 pycom10g02330 pycom10g02340 pycom10g02370 pycom10g02390 pycom10g02400 pycom12g00770 pycom15g33690 pycom15g33720 pycom15g33740 pycom15g33750 pycom15g33800
rosa_chinensis RchiOBHm_Chr1g0340831 RchiOBHm_Chr1g0365481 RchiOBHm_Chr1g0365531 RchiOBHm_Chr1g0365541 RchiOBHm_Chr1g0365551 RchiOBHm_Chr1g0365561 RchiOBHm_Chr1g0365641 RchiOBHm_Chr1g0382021 RchiOBHm_Chr1g0382041 RchiOBHm_Chr1g0382221 RchiOBHm_Chr1g0382261 RchiOBHm_Chr1g0382271 RchiOBHm_Chr1g0382281 RchiOBHm_Chr1g0382321 RchiOBHm_Chr3g0465111 RchiOBHm_Chr3g0481881 RchiOBHm_Chr3g0481891 RchiOBHm_Chr3g0481981 RchiOBHm_Chr3g0482041 RchiOBHm_Chr5g0055581 RchiOBHm_Chr5g0060381 RchiOBHm_Chr5g0061111 RchiOBHm_Chr5g0063811 RchiOBHm_Chr5g0064561 RchiOBHm_Chr5g0064571 RchiOBHm_Chr5g0064661 RchiOBHm_Chr5g0064701 RchiOBHm_Chr5g0064731 RchiOBHm_Chr5g0064871 RchiOBHm_Chr6g0245321 RchiOBHm_Chr6g0245331 RchiOBHm_Chr6g0245341 RchiOBHm_Chr6g0245481 RchiOBHm_Chr6g0245501 RchiOBHm_Chr6g0245551 RchiOBHm_Chr6g0246391 RchiOBHm_Chr6g0246501 RchiOBHm_Chr6g0246541 RchiOBHm_Chr6g0246601 RchiOBHm_Chr6g0246671 RchiOBHm_Chr6g0246721 RchiOBHm_Chr6g0246751 RchiOBHm_Chr6g0246861 RchiOBHm_Chr6g0246881 RchiOBHm_Chr6g0246891 RchiOBHm_Chr6g0249221 RchiOBHm_Chr6g0249691 RchiOBHm_Chr6g0249721 RchiOBHm_Chr6g0249731 RchiOBHm_Chr6g0249751 RchiOBHm_Chr6g0249841 RchiOBHm_Chr6g0249881 RchiOBHm_Chr6g0249921 RchiOBHm_Chr6g0249931 RchiOBHm_Chr6g0249951 RchiOBHm_Chr6g0250011 RchiOBHm_Chr6g0250021 RchiOBHm_Chr6g0250081 RchiOBHm_Chr6g0250091 RchiOBHm_Chr6g0250131 RchiOBHm_Chr6g0250161 RchiOBHm_Chr6g0250201 RchiOBHm_Chr6g0250241 RchiOBHm_Chr6g0250291 RchiOBHm_Chr6g0250301 RchiOBHm_Chr6g0250371 RchiOBHm_Chr6g0250771 RchiOBHm_Chr6g0250981 RchiOBHm_Chr6g0251301 RchiOBHm_Chr6g0251321 RchiOBHm_Chr6g0251341 RchiOBHm_Chr6g0251441 RchiOBHm_Chr6g0251471 RchiOBHm_Chr6g0272741 RchiOBHm_Chr6g0276581 RchiOBHm_Chr6g0276591 RchiOBHm_Chr6g0276631 RchiOBHm_Chr6g0284581 RchiOBHm_Chr6g0284641 RchiOBHm_Chr6g0285091 RchiOBHm_Chr7g0217981
rosa_laevigata RLG00000002427 RLG00000003507 RLG00000008496 RLG00000012678 RLG00000012735 RLG00000012736 RLG00000013083 RLG00000013084 RLG00000013384 RLG00000013386 RLG00000013660 RLG00000015037 RLG00000015242 RLG00000015253 RLG00000015255 RLG00000015256 RLG00000015259 RLG00000015307 RLG00000015465 RLG00000015466 RLG00000015504 RLG00000015506 RLG00000015507 RLG00000015510 RLG00000015513 RLG00000015544 RLG00000015545 RLG00000015549 RLG00000015550 RLG00000015552 RLG00000016855 RLG00000016858 RLG00000016859 RLG00000018281 RLG00000018283 RLG00000022622 RLG00000023379 RLG00000023937 RLG00000024655 RLG00000026187 RLG00000026189 RLG00000026190 RLG00000026191 RLG00000026192 RLG00000027420 RLG00000027421 RLG00000027661 RLG00000028903 RLG00000028904 RLG00000030248 RLG00000035359 RLG00000035360 RLG00000035361 RLG00000035429 RLG00000035456 RLG00000035679 RLG00000035680 RLG00000035681 RLG00000035735 RLG00000035738 RLG00000035844 RLG00000036364
rosa_multiflora Rmu_co8335069.1_g000001 Rmu_co8396115.1_g000001 Rmu_co8448557.1_g000001 Rmu_co8510855.1_g000001 Rmu_sc0000110.1_g000004 Rmu_sc0000110.1_g000007 Rmu_sc0000110.1_g000018 Rmu_sc0000110.1_g000019 Rmu_sc0000110.1_g000022 Rmu_sc0000110.1_g000023 Rmu_sc0000110.1_g000033 Rmu_sc0000110.1_g000037 Rmu_sc0000110.1_g000039 Rmu_sc0000276.1_g000031 Rmu_sc0000276.1_g000034 Rmu_sc0000411.1_g000006 Rmu_sc0000411.1_g000007 Rmu_sc0000452.1_g000027 Rmu_sc0000471.1_g000009 Rmu_sc0000507.1_g000020 Rmu_sc0000694.1_g000018 Rmu_sc0000701.1_g000002 Rmu_sc0000701.1_g000009 Rmu_sc0000701.1_g000010 Rmu_sc0000704.1_g000001 Rmu_sc0000704.1_g000042 Rmu_sc0000704.1_g000043 Rmu_sc0000969.1_g000002 Rmu_sc0001001.1_g000003 Rmu_sc0001066.1_g000004 Rmu_sc0001066.1_g000019 Rmu_sc0001209.1_g000023 Rmu_sc0001209.1_g000040 Rmu_sc0001209.1_g000043 Rmu_sc0001237.1_g000018 Rmu_sc0001246.1_g000016 Rmu_sc0001293.1_g000008 Rmu_sc0001293.1_g000011 Rmu_sc0001293.1_g000022 Rmu_sc0001293.1_g000023 Rmu_sc0001373.1_g000014 Rmu_sc0001382.1_g000001 Rmu_sc0001738.1_g000024 Rmu_sc0002025.1_g000009 Rmu_sc0002025.1_g000012 Rmu_sc0002025.1_g000013 Rmu_sc0002093.1_g000004 Rmu_sc0002202.1_g000008 Rmu_sc0002202.1_g000010 Rmu_sc0002202.1_g000011 Rmu_sc0002202.1_g000018 Rmu_sc0002406.1_g000014 Rmu_sc0002478.1_g000003 Rmu_sc0002535.1_g000042 Rmu_sc0002587.1_g000021 Rmu_sc0002587.1_g000023 Rmu_sc0002587.1_g000028 Rmu_sc0002587.1_g000039 Rmu_sc0002587.1_g000044 Rmu_sc0002587.1_g000048 Rmu_sc0002587.1_g000049 Rmu_sc0002793.1_g000005 Rmu_sc0003060.1_g000003 Rmu_sc0003060.1_g000004 Rmu_sc0003060.1_g000005 Rmu_sc0003131.1_g000001 Rmu_sc0003131.1_g000032 Rmu_sc0003255.1_g000009 Rmu_sc0003255.1_g000017 Rmu_sc0003270.1_g000028 Rmu_sc0003293.1_g000004 Rmu_sc0003293.1_g000008 Rmu_sc0003293.1_g000010 Rmu_sc0003352.1_g000009 Rmu_sc0003352.1_g000012 Rmu_sc0003386.1_g000012 Rmu_sc0003387.1_g000003 Rmu_sc0003387.1_g000007 Rmu_sc0003665.1_g000002 Rmu_sc0003811.1_g000001 Rmu_sc0004049.1_g000001 Rmu_sc0004191.1_g000039 Rmu_sc0004691.1_g000008 Rmu_sc0005257.1_g000014 Rmu_sc0005257.1_g000020 Rmu_sc0005685.1_g000005 Rmu_sc0006032.1_g000010 Rmu_sc0006638.1_g000016 Rmu_sc0006878.1_g000005 Rmu_sc0007049.1_g000005 Rmu_sc0007049.1_g000011 Rmu_sc0007049.1_g000012 Rmu_sc0007049.1_g000013 Rmu_sc0007049.1_g000014 Rmu_sc0007383.1_g000001 Rmu_sc0007383.1_g000005 Rmu_sc0007383.1_g000012 Rmu_sc0007558.1_g000003 Rmu_sc0007558.1_g000005 Rmu_sc0007722.1_g000001 Rmu_sc0008209.1_g000002 Rmu_sc0008209.1_g000008 Rmu_sc0008242.1_g000013 Rmu_sc0008965.1_g000001 Rmu_sc0009002.1_g000002 Rmu_sc0009002.1_g000006 Rmu_sc0009002.1_g000007 Rmu_sc0009002.1_g000010 Rmu_sc0009002.1_g000011 Rmu_sc0009227.1_g000011 Rmu_sc0009369.1_g000008 Rmu_sc0009380.1_g000013 Rmu_sc0009451.1_g000011 Rmu_sc0009952.1_g000008 Rmu_sc0009991.1_g000004 Rmu_sc0010993.1_g000005 Rmu_sc0010993.1_g000006 Rmu_sc0012343.1_g000012 Rmu_sc0014236.1_g000002 Rmu_sc0014912.1_g000002 Rmu_sc0014912.1_g000003 Rmu_sc0019669.1_g000001 Rmu_sc0020903.1_g000007 Rmu_sc0021230.1_g000001 Rmu_sc0022147.1_g000001 Rmu_sc0028629.1_g000002 Rmu_sc0031029.1_g000001 Rmu_sc0038922.1_g000001 Rmu_sc0039683.1_g000001 Rmu_sc0039712.1_g000001 Rmu_sc0043027.1_g000001 Rmu_ssc0000009.1_g000002 Rmu_ssc0000009.1_g000004 Rmu_ssc0000309.1_g000010
rosa_roxburghii Rroxscaffold_1G00014850 Rroxscaffold_1G00016420 Rroxscaffold_1G00016430 Rroxscaffold_1G00016970 Rroxscaffold_1G00016980 Rroxscaffold_1G00017020 Rroxscaffold_2G00103000 Rroxscaffold_2G00103010 Rroxscaffold_2G00121260 Rroxscaffold_2G00127090 Rroxscaffold_2G00127120 Rroxscaffold_2G00143350 Rroxscaffold_2G00143360 Rroxscaffold_3G00218090 Rroxscaffold_3G00232940 Rroxscaffold_3G00241540 Rroxscaffold_3G00241550 Rroxscaffold_4G00278190 Rroxscaffold_4G00278220 Rroxscaffold_4G00278240 Rroxscaffold_4G00278260 Rroxscaffold_4G00291120 Rroxscaffold_4G00291140 Rroxscaffold_4G00291150 Rroxscaffold_4G00291160 Rroxscaffold_4G00291180 Rroxscaffold_4G00291220 Rroxscaffold_4G00294350 Rroxscaffold_4G00304090 Rroxscaffold_4G00309820 Rroxscaffold_4G00314470 Rroxscaffold_6G00392280 Rroxscaffold_6G00399770 Rroxscaffold_6G00399780 Rroxscaffold_6G00399800 Rroxscaffold_6G00400110 Rroxscaffold_6G00400130 Rroxscaffold_6G00415240 Rroxscaffold_7G00183750 Rroxscaffold_7G00184040 Rroxscaffold_7G00184570 Rroxscaffold_7G00184580 Rroxscaffold_7G00192150 Rroxscaffold_7G00192460 Rroxscaffold_7G00196030 Rroxscaffold_7G00211080 Rroxscaffold_7G00214480 Rroxscaffold_7G00214490 Rroxscaffold_7G00214570 Rroxscaffold_7G00214580 Rroxscaffold_7G00214590 Rroxscaffold_7G00214610 Rroxscaffold_7G00214620 Rroxscaffold_7G00214790 Rroxscaffold_7G00216630 Rroxscaffold_7G00216640 Rroxscaffold_7G00216670 Rroxscaffold_7G00216680 Rroxscaffold_7G00216690 Rroxscaffold_7G00216730 Rroxscaffold_7G00216770 Rroxscaffold_7G00216780 Rroxscaffold_7G00216820 Rroxscaffold_7G00216830 Rroxscaffold_7G00217280 Rroxscaffold_7G00217310 Rroxscaffold_7G00217320 Rroxscaffold_7G00217330
rosa_rugosa Rorug01G0040400 Rorug01G0173300 Rorug01G0173400 Rorug01G0296100 Rorug01G0296200 Rorug01G0296300 Rorug01G0296400 Rorug01G0322300 Rorug01G0432900 Rorug01G0433100 Rorug01G0433200 Rorug01G0433500 Rorug02G0054900 Rorug02G0077900 Rorug02G0078000 Rorug02G0078100 Rorug02G0207300 Rorug02G0242200 Rorug02G0242300 Rorug03G0075500 Rorug03G0075500 Rorug03G0194300 Rorug05G0329100 Rorug05G0329300 Rorug05G0360000 Rorug05G0360000 Rorug05G0360300 Rorug05G0360400.1 Rorug05G0360500 Rorug05G0364200 Rorug05G0366200 Rorug05G0366300 Rorug05G0366400 Rorug05G0366600 Rorug05G0376400 Rorug05G0376500 Rorug05G0421100 Rorug05G0494600 Rorug05G0494800 Rorug05G0494900 Rorug05G0495100 Rorug05G0495200 Rorug05G0495900 Rorug05G0498200 Rorug05G0498200 Rorug05G0498300.1 Rorug05G0499100 Rorug05G0501700 Rorug05G0501800 Rorug05G0501900 Rorug05G0513800 Rorug05G0514100 Rorug05G0514200 Rorug05G0514200 Rorug05G0514500 Rorug05G0519200 Rorug05G0519300.1 Rorug05G0519400 Rorug05G0519400 Rorug05G0520600 Rorug05G0520700 Rorug05G0520800 Rorug05G0521300 Rorug05G0521400 Rorug05G0521500 Rorug05G0550800 Rorug06G0070400 Rorug06G0070500 Rorug06G0070600 Rorug06G0099500 Rorug06G0099600 Rorug06G0102100 Rorug06G0102200 Rorug06G0102300 Rorug06G0102300 Rorug06G0102400 Rorug06G0162500 Rorug06G0164500 Rorug06G0164600 Rorug06G0164800 Rorug06G0170600 Rorug07G0172900 Rorug07G0172900 Rorug07G0172900 Rorug07G0173000
rosa_samantha Rh1BG156400 Rh1BG156500 Rh1BG156600 Rh1BG292400 Rh1BG413500 Rh1BG413800 Rh1BG414100 Rh1BG414200 Rh1BG414400 Rh1CG059400 Rh1CG309000 Rh1CG428300 Rh1CG428400 Rh2BG129800 Rh2BG273700 Rh2CG131000 Rh2DG131300 Rh3AG245200 Rh3AG245600 Rh3BG139100 Rh3BG280400 Rh3BG280500 Rh3CG141200 Rh3CG149500 Rh3CG275400 Rh3CG275800 Rh3CG276500 Rh3CG276800 Rh3DG140400 Rh3DG272100 Rh3DG272300 Rh3DG272400 Rh3DG272700 Rh3DG272800 Rh3DG272900 Rh5AG099100 Rh5AG424200 Rh5AG435200 Rh5BG411900 Rh5BG439500 Rh5CG108000 Rh5CG436900 Rh5CG457800 Rh5CG462200 Rh5CG462300 Rh6AG033600 Rh6AG186700 Rh6BG190100 Rh6BG215300 Rh6BG217600 Rh6BG217800 Rh6CG188800 Rh6CG284800 Rh6DG003400 Rh6DG008400 Rh6DG008700 Rh6DG008800 Rh6DG009100 Rh6DG009400 Rh6DG025100 Rh6DG180300 Rh6DG209700 Rh6DG210100 Rh6DG272100 Rh6DG272300 Rh6DG273000 Rh7BG305400
rosa_wichuraiana Rw0G010970 Rw0G011460 Rw0G017090 Rw0G023140 Rw1G007890 Rw1G010200 Rw1G015630 Rw1G015640 Rw1G029350 Rw1G029370 Rw1G029380 Rw1G029390 Rw1G029400 Rw1G041290 Rw1G041560 Rw2G009760 Rw2G009770 Rw2G020640 Rw2G021670 Rw2G021690 Rw2G024060 Rw3G011380 Rw3G021890 Rw3G021910 Rw3G021940 Rw3G021950 Rw3G021960 Rw5G037070 Rw5G037080 Rw5G037090 Rw5G039330 Rw5G039890 Rw5G039900 Rw5G039920 Rw5G040740 Rw6G000500 Rw6G000510 Rw6G000520 Rw6G000550 Rw6G000570 Rw6G000580 Rw6G000610 Rw6G000820 Rw6G001070 Rw6G001090 Rw6G001100 Rw6G001170 Rw6G001180 Rw6G001260 Rw6G001270 Rw6G001280 Rw6G001300 Rw6G002450 Rw6G002470 Rw6G002500 Rw6G002830 Rw6G002870 Rw6G003000 Rw6G003080 Rw6G016110 Rw6G018400 Rw6G018590 Rw6G018610 Rw6G023840 Rw6G023880 Rw6G024250 Rw6G024260 Rw7G026620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 308
Acc16I TGCGCA 1 cut(s) 434
AccBSI CCGCTC 1 cut(s) 224
AciI CCGC 1 cut(s) 224
AclWI GGATC 4 cut(s) 239, 252, 565, 578
AcoI YGGCCR 2 cut(s) 279, 882
AcsI RAATTY 1 cut(s) 502
AcuI CTGAAG 2 cut(s) 363, 879
AfaI GTAC 4 cut(s) 230, 580, 731, 744
AgeI ACCGGT 1 cut(s) 422
AgsI TTSAA 3 cut(s) 550, 613, 872
AjnI CCWGG 2 cut(s) 108, 722
Alw21I GWGCWC 2 cut(s) 204, 351
AlwI GGATC 4 cut(s) 239, 252, 565, 578
AlwNI CAGNNNCTG 1 cut(s) 512
AoxI GGCC 3 cut(s) 279, 882, 909
ApeKI GCWGC 2 cut(s) 149, 410
ApoI RAATTY 1 cut(s) 502
ArsI GACNNNNNNTTYG 2 cut(s) 52, 84
AsiGI ACCGGT 1 cut(s) 422
AspLEI GCGC 2 cut(s) 189, 435
AsuHPI GGTGA 2 cut(s) 437, 466
BalI TGGCCA 2 cut(s) 281, 884
BamHI GGATCC 2 cut(s) 244, 570
BanII GRGCYC 2 cut(s) 204, 351
BauI CACGAG 1 cut(s) 792
Bbv12I GWGCWC 2 cut(s) 204, 351
BbvI GCAGC 2 cut(s) 161, 397
BccI CCATC 3 cut(s) 69, 113, 290
BcgI CGANNNNNNTGC 4 cut(s) 470, 504, 764, 798
BciT130I CCWGG 2 cut(s) 110, 724
BclI TGATCA 2 cut(s) 22, 628
BfaI CTAG 2 cut(s) 353, 407
BfoI RGCGCY 1 cut(s) 190
BglII AGATCT 2 cut(s) 175, 403
BisI GCNGC 2 cut(s) 150, 411
BlsI GCNGC 2 cut(s) 151, 412
BmcAI AGTACT 1 cut(s) 731
Bme1390I CCNGG 2 cut(s) 110, 724
BmiI GGNNCC 2 cut(s) 246, 572
BmrFI CCNGG 2 cut(s) 110, 724
BmsI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
BpuEI CTTGAG 2 cut(s) 212, 844
BsaJI CCNNGG 2 cut(s) 109, 722
BsaWI WCCGGW 1 cut(s) 422
Bse118I RCCGGY 1 cut(s) 422
Bse3DI GCAATG 2 cut(s) 689, 757
BseBI CCWGG 2 cut(s) 110, 724
BseDI CCNNGG 2 cut(s) 109, 722
BseGI GGATG 5 cut(s) 5, 80, 105, 667, 787
BseMI GCAATG 2 cut(s) 689, 757
BseMII CTCAG 2 cut(s) 189, 566
BseXI GCAGC 2 cut(s) 161, 397
BsgI GTGCAG 1 cut(s) 396
BshFI GGCC 3 cut(s) 281, 884, 911
BshTI ACCGGT 1 cut(s) 422
BsiHKAI GWGCWC 2 cut(s) 204, 351
BsiSI CCGG 1 cut(s) 423
BslFI GGGAC 4 cut(s) 94, 833, 842, 914
BsmFI GGGAC 4 cut(s) 94, 833, 842, 914
BsnI GGCC 3 cut(s) 281, 884, 911
Bsp1286I GDGCHC 2 cut(s) 204, 351
Bsp143I GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
BspACI CCGC 1 cut(s) 224
BspANI GGCC 3 cut(s) 281, 884, 911
BspCNI CTCAG 2 cut(s) 190, 567
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 2 cut(s) 246, 572
BspPI GGATC 4 cut(s) 239, 252, 565, 578
BspQI GCTCTTC 2 cut(s) 339, 358
BsrBI CCGCTC 1 cut(s) 224
BsrDI GCAATG 2 cut(s) 689, 757
BsrFI RCCGGY 1 cut(s) 422
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 2 cut(s) 109, 722
BssMI GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
BssSI CACGAG 1 cut(s) 792
Bst2BI CACGAG 1 cut(s) 792
Bst2UI CCWGG 2 cut(s) 110, 724
Bst4CI ACNGT 4 cut(s) 233, 467, 476, 860
Bst6I CTCTTC 2 cut(s) 339, 358
BstC8I GCNNGC 1 cut(s) 437
BstDEI CTNAG 2 cut(s) 198, 575
BstF5I GGATG 5 cut(s) 5, 80, 105, 667, 787
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 2 cut(s) 189, 435
BstKTI GATC 9 cut(s) 25, 144, 178, 247, 256, 406, 486, 573, 631
BstMBI GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
BstMWI GCNNNNNNNGC 3 cut(s) 269, 278, 497
BstNI CCWGG 2 cut(s) 110, 724
BstNSI RCATGY 1 cut(s) 129
BstSCI CCNGG 2 cut(s) 108, 722
BstV1I GCAGC 2 cut(s) 161, 397
BstX2I RGATCY 4 cut(s) 175, 244, 403, 570
BstYI RGATCY 4 cut(s) 175, 244, 403, 570
BsuRI GGCC 3 cut(s) 281, 884, 911
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 5 cut(s) 5, 80, 105, 667, 787
BtsIMutI CAGTG 2 cut(s) 297, 865
Cac8I GCNNGC 1 cut(s) 437
CaiI CAGNNNCTG 1 cut(s) 512
CciI TCATGA 1 cut(s) 553
CfoI GCGC 2 cut(s) 189, 435
Cfr10I RCCGGY 1 cut(s) 422
Csp6I GTAC 4 cut(s) 229, 579, 730, 743
CspAI ACCGGT 1 cut(s) 422
CviAII CATG 3 cut(s) 126, 554, 601
CviQI GTAC 4 cut(s) 229, 579, 730, 743
DdeI CTNAG 2 cut(s) 198, 575
DpnI GATC 9 cut(s) 24, 143, 177, 246, 255, 405, 485, 572, 630
DpnII GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 2 cut(s) 279, 882
Eam1104I CTCTTC 2 cut(s) 339, 358
EarI CTCTTC 2 cut(s) 339, 358
Ecl136II GAGCTC 2 cut(s) 202, 349
Eco147I AGGCCT 1 cut(s) 911
Eco24I GRGCYC 2 cut(s) 204, 351
Eco53kI GAGCTC 2 cut(s) 202, 349
Eco57I CTGAAG 2 cut(s) 363, 879
EcoICRI GAGCTC 2 cut(s) 202, 349
EcoRII CCWGG 2 cut(s) 108, 722
EcoT22I ATGCAT 1 cut(s) 127
EcoT38I GRGCYC 2 cut(s) 204, 351
FaeI CATG 3 cut(s) 129, 557, 604
FaiI YATR 9 cut(s) 127, 156, 317, 417, 431, 471, 555, 602, 696
FalI AAGNNNNNCTT 4 cut(s) 162, 194, 352, 384
FaqI GGGAC 4 cut(s) 94, 833, 842, 914
FatI CATG 3 cut(s) 125, 553, 600
FbaI TGATCA 2 cut(s) 22, 628
Fnu4HI GCNGC 2 cut(s) 150, 411
FokI GGATG 4 cut(s) 87, 92, 674, 794
FriOI GRGCYC 2 cut(s) 204, 351
Fsp4HI GCNGC 2 cut(s) 150, 411
FspBI CTAG 2 cut(s) 353, 407
FspI TGCGCA 1 cut(s) 434
GlaI GCGC 2 cut(s) 188, 434
GluI GCNGC 2 cut(s) 150, 411
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 3 cut(s) 281, 884, 911
HapII CCGG 1 cut(s) 423
HhaI GCGC 2 cut(s) 189, 435
Hin1II CATG 3 cut(s) 129, 557, 604
Hin6I GCGC 2 cut(s) 187, 433
HinP1I GCGC 2 cut(s) 187, 433
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 1 cut(s) 194
HpaII CCGG 1 cut(s) 423
HphI GGTGA 2 cut(s) 437, 466
Hpy166II GTNNAC 3 cut(s) 229, 334, 844
Hpy188I TCNGA 3 cut(s) 59, 199, 508
Hpy8I GTNNAC 3 cut(s) 229, 334, 844
HpyAV CCTTC 4 cut(s) 85, 679, 733, 922
HpyCH4III ACNGT 4 cut(s) 233, 467, 476, 860
HpyCH4V TGCA 7 cut(s) 47, 125, 263, 413, 491, 694, 755
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 278, 497
HpyF3I CTNAG 2 cut(s) 198, 575
Hsp92II CATG 3 cut(s) 129, 557, 604
HspAI GCGC 2 cut(s) 187, 433
Ksp22I TGATCA 2 cut(s) 22, 628
Kzo9I GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
LguI GCTCTTC 2 cut(s) 339, 358
LmnI GCTCC 2 cut(s) 354, 585
Lsp1109I GCAGC 2 cut(s) 161, 397
LweI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
MaeI CTAG 2 cut(s) 353, 407
MaeIII GTNAC 3 cut(s) 454, 476, 802
MalI GATC 9 cut(s) 24, 143, 177, 246, 255, 405, 485, 572, 630
MbiI CCGCTC 1 cut(s) 224
MboI GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
MboII GAAGA 8 cut(s) 185, 356, 375, 410, 413, 512, 569, 865
MflI RGATCY 4 cut(s) 175, 244, 403, 570
MhlI GDGCHC 2 cut(s) 204, 351
MlsI TGGCCA 2 cut(s) 281, 884
MluCI AATT 4 cut(s) 26, 502, 561, 798
MluNI TGGCCA 2 cut(s) 281, 884
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 4 cut(s) 215, 318, 375, 639
Mox20I TGGCCA 2 cut(s) 281, 884
Mph1103I ATGCAT 1 cut(s) 127
MscI TGGCCA 2 cut(s) 281, 884
MslI CAYNNNNRTG 1 cut(s) 320
Msp20I TGGCCA 2 cut(s) 281, 884
MspI CCGG 1 cut(s) 423
MspR9I CCNGG 2 cut(s) 110, 724
MvaI CCWGG 2 cut(s) 110, 724
MwoI GCNNNNNNNGC 3 cut(s) 269, 278, 497
NdeII GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
NlaIII CATG 3 cut(s) 129, 557, 604
NlaIV GGNNCC 2 cut(s) 246, 572
NmuCI GTSAC 1 cut(s) 454
NsbI TGCGCA 1 cut(s) 434
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 1 cut(s) 129
PagI TCATGA 1 cut(s) 553
PceI AGGCCT 1 cut(s) 911
PciSI GCTCTTC 2 cut(s) 339, 358
PinAI ACCGGT 1 cut(s) 422
PkrI GCNGC 2 cut(s) 151, 412
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
Psp124BI GAGCTC 2 cut(s) 204, 351
Psp6I CCWGG 2 cut(s) 108, 722
PspGI CCWGG 2 cut(s) 108, 722
PspN4I GGNNCC 2 cut(s) 246, 572
PstNI CAGNNNCTG 1 cut(s) 512
PsuI RGATCY 4 cut(s) 175, 244, 403, 570
RsaI GTAC 4 cut(s) 230, 580, 731, 744
RsaNI GTAC 4 cut(s) 229, 579, 730, 743
RseI CAYNNNNRTG 1 cut(s) 320
SacI GAGCTC 2 cut(s) 204, 351
SapI GCTCTTC 2 cut(s) 339, 358
SatI GCNGC 2 cut(s) 150, 411
Sau3AI GATC 9 cut(s) 22, 141, 175, 244, 253, 403, 483, 570, 628
ScaI AGTACT 1 cut(s) 731
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 2 cut(s) 110, 724
SduI GDGCHC 2 cut(s) 204, 351
SfaNI GCATC 6 cut(s) 14, 34, 250, 517, 698, 772
SgrAI CRCCGGYG 1 cut(s) 422
SmiMI CAYNNNNRTG 1 cut(s) 320
SmlI CTYRAG 2 cut(s) 191, 823
SmoI CTYRAG 2 cut(s) 191, 823
Sse9I AATT 4 cut(s) 26, 502, 561, 798
SseBI AGGCCT 1 cut(s) 911
SsiI CCGC 1 cut(s) 224
SspMI CTAG 2 cut(s) 353, 407
SstI GAGCTC 2 cut(s) 204, 351
StuI AGGCCT 1 cut(s) 911
StyD4I CCNGG 2 cut(s) 108, 722
TaaI ACNGT 4 cut(s) 233, 467, 476, 860
TaqI TCGA 1 cut(s) 706
TasI AATT 4 cut(s) 26, 502, 561, 798
TatI WGTACW 2 cut(s) 578, 729
TscAI CASTG 2 cut(s) 304, 865
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 2 cut(s) 149, 410
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 1 cut(s) 570
TspRI CASTG 2 cut(s) 304, 865
XapI RAATTY 1 cut(s) 502
XceI RCATGY 1 cut(s) 129
XspI CTAG 2 cut(s) 353, 407
ZrmI AGTACT 1 cut(s) 731
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.