TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1311 |
| Acc36I | ACCTGC | 1 cut(s) | 1287 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1243 |
| AccI | GTMKAC | 1 cut(s) | 1573 |
| AccII | CGCG | 2 cut(s) | 2483, 3144 |
| AciI | CCGC | 5 cut(s) | 496, 2933, 2960, 2966, 3042 |
| AclI | AACGTT | 1 cut(s) | 3153 |
| AclWI | GGATC | 3 cut(s) | 1182, 2652, 3044 |
| AcoI | YGGCCR | 1 cut(s) | 2927 |
| AcsI | RAATTY | 6 cut(s) | 481, 731, 1429, 2164, 2300, 2702 |
| AcuI | CTGAAG | 5 cut(s) | 1055, 1296, 1515, 1618, 2240 |
| AdeI | CACNNNGTG | 1 cut(s) | 2099 |
| AfaI | GTAC | 5 cut(s) | 30, 237, 500, 2069, 2765 |
| AfeI | AGCGCT | 1 cut(s) | 2419 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1243, 1585, 2285, 2731 |
| AflII | CTTAAG | 1 cut(s) | 1528 |
| AjnI | CCWGG | 9 cut(s) | 579, 624, 1282, 1371, 1389, 2284, 2317, 2380, 2725 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 940, 972 |
| Alw21I | GWGCWC | 1 cut(s) | 1967 |
| Alw26I | GTCTC | 3 cut(s) | 821, 1456, 2315 |
| AlwI | GGATC | 3 cut(s) | 1182, 2652, 3044 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2852 |
| Aor51HI | AGCGCT | 1 cut(s) | 2419 |
| AoxI | GGCC | 4 cut(s) | 2215, 2629, 2722, 2927 |
| ApeKI | GCWGC | 5 cut(s) | 738, 1293, 2061, 2846, 2957 |
| ApoI | RAATTY | 6 cut(s) | 481, 731, 1429, 2164, 2300, 2702 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2407, 2439 |
| AseI | ATTAAT | 1 cut(s) | 342 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 548, 592, 609, 1068, 1257, 2249 |
| AspLEI | GCGC | 4 cut(s) | 1293, 2143, 2420, 3144 |
| AspS9I | GGNCC | 2 cut(s) | 1375, 2723 |
| AsuC2I | CCSGG | 3 cut(s) | 91, 2013, 2604 |
| AsuHPI | GGTGA | 7 cut(s) | 547, 2085, 2218, 2508, 2639, 3023, 3235 |
| AsuII | TTCGAA | 1 cut(s) | 2199 |
| AsuNHI | GCTAGC | 1 cut(s) | 2938 |
| AvaII | GGWCC | 1 cut(s) | 1375 |
| BanII | GRGCYC | 1 cut(s) | 2814 |
| BauI | CACGAG | 1 cut(s) | 2097 |
| BbsI | GAAGAC | 4 cut(s) | 1649, 1746, 1802, 2691 |
| Bbv12I | GWGCWC | 1 cut(s) | 1967 |
| BbvI | GCAGC | 5 cut(s) | 750, 1305, 2048, 2858, 2969 |
| BceAI | ACGGC | 2 cut(s) | 167, 2202 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2093, 2127 |
| BciT130I | CCWGG | 9 cut(s) | 581, 626, 1284, 1373, 1391, 2286, 2319, 2382, 2727 |
| BclI | TGATCA | 2 cut(s) | 1321, 1381 |
| BcnI | CCSGG | 3 cut(s) | 91, 2013, 2604 |
| BcoDI | GTCTC | 3 cut(s) | 821, 1456, 2315 |
| BfaI | CTAG | 7 cut(s) | 506, 810, 993, 2838, 2939, 2976, 3191 |
| BfmI | CTRYAG | 2 cut(s) | 2436, 2662 |
| BfoI | RGCGCY | 2 cut(s) | 2144, 2421 |
| BfrI | CTTAAG | 1 cut(s) | 1528 |
| BfuAI | ACCTGC | 1 cut(s) | 1287 |
| BglII | AGATCT | 3 cut(s) | 508, 566, 2440 |
| BisI | GCNGC | 6 cut(s) | 739, 1294, 2062, 2847, 2958, 2967 |
| BlsI | GCNGC | 6 cut(s) | 740, 1295, 2063, 2848, 2959, 2968 |
| Bme18I | GGWCC | 1 cut(s) | 1375 |
| BmgT120I | GGNCC | 2 cut(s) | 1375, 2723 |
| BmiI | GGNNCC | 3 cut(s) | 1846, 2594, 2811 |
| BmsI | GCATC | 5 cut(s) | 263, 804, 1212, 1342, 2515 |
| BmtI | GCTAGC | 1 cut(s) | 2942 |
| BpiI | GAAGAC | 4 cut(s) | 1649, 1746, 1802, 2691 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1577, 1609 |
| BpmI | CTGGAG | 2 cut(s) | 174, 2769 |
| Bpu10I | CCTNAGC | 2 cut(s) | 132, 3070 |
| Bpu14I | TTCGAA | 1 cut(s) | 2199 |
| BpuEI | CTTGAG | 2 cut(s) | 1490, 3158 |
| BpuMI | CCSGG | 3 cut(s) | 91, 2013, 2604 |
| Bsa29I | ATCGAT | 1 cut(s) | 2718 |
| BsaBI | GATNNNNATC | 5 cut(s) | 342, 915, 1320, 2922, 3115 |
| BsaJI | CCNNGG | 3 cut(s) | 624, 2012, 2725 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1243, 1585, 2285, 2731 |
| Bse118I | RCCGGY | 1 cut(s) | 2929 |
| Bse1I | ACTGG | 5 cut(s) | 326, 497, 2208, 2693, 2949 |
| Bse3DI | GCAATG | 3 cut(s) | 769, 1756, 2560 |
| Bse8I | GATNNNNATC | 5 cut(s) | 342, 915, 1320, 2922, 3115 |
| BseBI | CCWGG | 9 cut(s) | 581, 626, 1284, 1373, 1391, 2286, 2319, 2382, 2727 |
| BseCI | ATCGAT | 1 cut(s) | 2718 |
| BseDI | CCNNGG | 3 cut(s) | 624, 2012, 2725 |
| BseJI | GATNNNNATC | 5 cut(s) | 342, 915, 1320, 2922, 3115 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1243, 1585, 2285, 2731 |
| BseMI | GCAATG | 3 cut(s) | 769, 1756, 2560 |
| BseMII | CTCAG | 6 cut(s) | 59, 146, 1322, 1575, 2640, 2819 |
| BseNI | ACTGG | 5 cut(s) | 326, 497, 2208, 2693, 2949 |
| BseRI | GAGGAG | 1 cut(s) | 3060 |
| BseX3I | CGGCCG | 1 cut(s) | 2927 |
| BseXI | GCAGC | 5 cut(s) | 750, 1305, 2048, 2858, 2969 |
| BseYI | CCCAGC | 1 cut(s) | 817 |
| BsgI | GTGCAG | 2 cut(s) | 27, 806 |
| Bsh1236I | CGCG | 2 cut(s) | 2483, 3144 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2718, 2930 |
| BshFI | GGCC | 4 cut(s) | 2217, 2631, 2724, 2929 |
| BshVI | ATCGAT | 1 cut(s) | 2718 |
| BsiEI | CGRYCG | 2 cut(s) | 2718, 2930 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1967 |
| BsiSI | CCGG | 6 cut(s) | 91, 1736, 2012, 2228, 2604, 2930 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1243, 1585, 2285, 2731 |
| BsmAI | GTCTC | 3 cut(s) | 821, 1456, 2315 |
| BsmI | GAATGC | 2 cut(s) | 302, 2116 |
| BsnI | GGCC | 4 cut(s) | 2217, 2631, 2724, 2929 |
| Bsp119I | TTCGAA | 1 cut(s) | 2199 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1967, 2814 |
| BspACI | CCGC | 5 cut(s) | 496, 2933, 2960, 2966, 3042 |
| BspANI | GGCC | 4 cut(s) | 2217, 2631, 2724, 2929 |
| BspCNI | CTCAG | 6 cut(s) | 60, 145, 1323, 1576, 2639, 2818 |
| BspDI | ATCGAT | 1 cut(s) | 2718 |
| BspFNI | CGCG | 2 cut(s) | 2483, 3144 |
| BspHI | TCATGA | 1 cut(s) | 847 |
| BspLI | GGNNCC | 3 cut(s) | 1846, 2594, 2811 |
| BspMI | ACCTGC | 1 cut(s) | 1287 |
| BspOI | GCTAGC | 1 cut(s) | 2942 |
| BspPI | GGATC | 3 cut(s) | 1182, 2652, 3044 |
| BspQI | GCTCTTC | 2 cut(s) | 1272, 1761 |
| BspT104I | TTCGAA | 1 cut(s) | 2199 |
| BspTI | CTTAAG | 1 cut(s) | 1528 |
| BsrDI | GCAATG | 3 cut(s) | 769, 1756, 2560 |
| BsrFI | RCCGGY | 1 cut(s) | 2929 |
| BsrI | ACTGG | 5 cut(s) | 326, 497, 2208, 2693, 2949 |
| BssAI | RCCGGY | 1 cut(s) | 2929 |
| BssECI | CCNNGG | 3 cut(s) | 624, 2012, 2725 |
| BssNAI | GTATAC | 1 cut(s) | 1574 |
| BssSI | CACGAG | 1 cut(s) | 2097 |
| Bst1107I | GTATAC | 1 cut(s) | 1574 |
| Bst2BI | CACGAG | 1 cut(s) | 2097 |
| Bst2UI | CCWGG | 9 cut(s) | 581, 626, 1284, 1373, 1391, 2286, 2319, 2382, 2727 |
| Bst4CI | ACNGT | 3 cut(s) | 161, 1417, 2854 |
| Bst6I | CTCTTC | 5 cut(s) | 25, 1272, 1761, 1812, 2775 |
| BstAFI | CTTAAG | 1 cut(s) | 1528 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1231 |
| BstBI | TTCGAA | 1 cut(s) | 2199 |
| BstC8I | GCNNGC | 3 cut(s) | 1289, 2931, 2940 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1583 |
| BstFNI | CGCG | 2 cut(s) | 2483, 3144 |
| BstH2I | RGCGCY | 2 cut(s) | 2144, 2421 |
| BstHHI | GCGC | 4 cut(s) | 1293, 2143, 2420, 3144 |
| BstMAI | GTCTC | 3 cut(s) | 821, 1456, 2315 |
| BstMCI | CGRYCG | 2 cut(s) | 2718, 2930 |
| BstNI | CCWGG | 9 cut(s) | 581, 626, 1284, 1373, 1391, 2286, 2319, 2382, 2727 |
| BstSFI | CTRYAG | 2 cut(s) | 2436, 2662 |
| BstUI | CGCG | 2 cut(s) | 2483, 3144 |
| BstV1I | GCAGC | 5 cut(s) | 750, 1305, 2048, 2858, 2969 |
| BstV2I | GAAGAC | 4 cut(s) | 1649, 1746, 1802, 2691 |
| BstX2I | RGATCY | 4 cut(s) | 508, 566, 1187, 2440 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1372 |
| BstYI | RGATCY | 4 cut(s) | 508, 566, 1187, 2440 |
| BstZ17I | GTATAC | 1 cut(s) | 1574 |
| BstZI | CGGCCG | 1 cut(s) | 2927 |
| Bsu15I | ATCGAT | 1 cut(s) | 2718 |
| BsuRI | GGCC | 4 cut(s) | 2217, 2631, 2724, 2929 |
| BsuTUI | ATCGAT | 1 cut(s) | 2718 |
| BtsI | GCAGTG | 4 cut(s) | 1362, 1675, 2063, 2508 |
| BtsIMutI | CAGTG | 7 cut(s) | 1362, 1605, 1675, 1967, 2063, 2508, 2942 |
| BveI | ACCTGC | 1 cut(s) | 1287 |
| Cac8I | GCNNGC | 3 cut(s) | 1289, 2931, 2940 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2852 |
| CciI | TCATGA | 1 cut(s) | 847 |
| CfoI | GCGC | 4 cut(s) | 1293, 2143, 2420, 3144 |
| Cfr10I | RCCGGY | 1 cut(s) | 2929 |
| Cfr13I | GGNCC | 2 cut(s) | 1375, 2723 |
| ClaI | ATCGAT | 1 cut(s) | 2718 |
| CsiI | ACCWGGT | 1 cut(s) | 579 |
| Csp6I | GTAC | 5 cut(s) | 29, 236, 499, 2068, 2764 |
| CviQI | GTAC | 5 cut(s) | 29, 236, 499, 2068, 2764 |
| DraI | TTTAAA | 1 cut(s) | 1096 |
| DraIII | CACNNNGTG | 1 cut(s) | 2099 |
| EaeI | YGGCCR | 1 cut(s) | 2927 |
| EagI | CGGCCG | 1 cut(s) | 2927 |
| Eam1104I | CTCTTC | 5 cut(s) | 25, 1272, 1761, 1812, 2775 |
| EarI | CTCTTC | 5 cut(s) | 25, 1272, 1761, 1812, 2775 |
| EciI | GGCGGA | 1 cut(s) | 3057 |
| EclXI | CGGCCG | 1 cut(s) | 2927 |
| Eco24I | GRGCYC | 1 cut(s) | 2814 |
| Eco47I | GGWCC | 1 cut(s) | 1375 |
| Eco47III | AGCGCT | 1 cut(s) | 2419 |
| Eco52I | CGGCCG | 1 cut(s) | 2927 |
| Eco57I | CTGAAG | 5 cut(s) | 1055, 1296, 1515, 1618, 2240 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1583 |
| EcoRI | GAATTC | 1 cut(s) | 731 |
| EcoRII | CCWGG | 9 cut(s) | 579, 624, 1282, 1371, 1389, 2284, 2317, 2380, 2725 |
| EcoT22I | ATGCAT | 4 cut(s) | 256, 302, 1227, 1805 |
| EcoT38I | GRGCYC | 1 cut(s) | 2814 |
| FalI | AAGNNNNNCTT | 7 cut(s) | 36, 1606, 1638, 1686, 1718, 3053, 3085 |
| FauNDI | CATATG | 2 cut(s) | 25, 55 |
| FbaI | TGATCA | 2 cut(s) | 1321, 1381 |
| FblI | GTMKAC | 1 cut(s) | 1573 |
| Fnu4HI | GCNGC | 6 cut(s) | 739, 1294, 2062, 2847, 2958, 2967 |
| FriOI | GRGCYC | 1 cut(s) | 2814 |
| Fsp4HI | GCNGC | 6 cut(s) | 739, 1294, 2062, 2847, 2958, 2967 |
| FspBI | CTAG | 7 cut(s) | 506, 810, 993, 2838, 2939, 2976, 3191 |
| GlaI | GCGC | 4 cut(s) | 1292, 2142, 2419, 3143 |
| GluI | GCNGC | 6 cut(s) | 739, 1294, 2062, 2847, 2958, 2967 |
| GsaI | CCCAGC | 1 cut(s) | 821 |
| GsuI | CTGGAG | 2 cut(s) | 174, 2769 |
| HaeII | RGCGCY | 2 cut(s) | 2144, 2421 |
| HaeIII | GGCC | 4 cut(s) | 2217, 2631, 2724, 2929 |
| HapII | CCGG | 6 cut(s) | 91, 1736, 2012, 2228, 2604, 2930 |
| HhaI | GCGC | 4 cut(s) | 1293, 2143, 2420, 3144 |
| Hin6I | GCGC | 4 cut(s) | 1291, 2141, 2418, 3142 |
| HinP1I | GCGC | 4 cut(s) | 1291, 2141, 2418, 3142 |
| HincII | GTYRAC | 2 cut(s) | 1591, 2794 |
| HindII | GTYRAC | 2 cut(s) | 1591, 2794 |
| HindIII | AAGCTT | 2 cut(s) | 1987, 2087 |
| HpaI | GTTAAC | 1 cut(s) | 2794 |
| HpaII | CCGG | 6 cut(s) | 91, 1736, 2012, 2228, 2604, 2930 |
| HphI | GGTGA | 7 cut(s) | 547, 2085, 2218, 2508, 2639, 3023, 3235 |
| Hpy166II | GTNNAC | 7 cut(s) | 164, 1574, 1591, 2669, 2764, 2794, 2885 |
| Hpy8I | GTNNAC | 7 cut(s) | 164, 1574, 1591, 2669, 2764, 2794, 2885 |
| HpyCH4III | ACNGT | 3 cut(s) | 161, 1417, 2854 |
| HpyCH4IV | ACGT | 3 cut(s) | 1395, 2148, 3153 |
| HpySE526I | ACGT | 3 cut(s) | 1395, 2148, 3153 |
| HspAI | GCGC | 4 cut(s) | 1291, 2141, 2418, 3142 |
| KroI | GCCGGC | 1 cut(s) | 2929 |
| KroNI | GCCGGC | 1 cut(s) | 2931 |
| Ksp22I | TGATCA | 2 cut(s) | 1321, 1381 |
| KspAI | GTTAAC | 1 cut(s) | 2794 |
| LguI | GCTCTTC | 2 cut(s) | 1272, 1761 |
| LmnI | GCTCC | 4 cut(s) | 854, 1239, 1844, 2809 |
| Lsp1109I | GCAGC | 5 cut(s) | 750, 1305, 2048, 2858, 2969 |
| LweI | GCATC | 5 cut(s) | 263, 804, 1212, 1342, 2515 |
| MabI | ACCWGGT | 1 cut(s) | 579 |
| MaeI | CTAG | 7 cut(s) | 506, 810, 993, 2838, 2939, 2976, 3191 |
| MaeII | ACGT | 3 cut(s) | 1395, 2148, 3153 |
| MaeIII | GTNAC | 7 cut(s) | 789, 881, 1502, 1910, 2219, 2431, 3011 |
| MfeI | CAATTG | 2 cut(s) | 207, 929 |
| MflI | RGATCY | 4 cut(s) | 508, 566, 1187, 2440 |
| MhlI | GDGCHC | 2 cut(s) | 1967, 2814 |
| MlyI | GAGTC | 1 cut(s) | 1586 |
| MmeI | TCCRAC | 2 cut(s) | 565, 2112 |
| Mph1103I | ATGCAT | 4 cut(s) | 256, 302, 1227, 1805 |
| MroNI | GCCGGC | 1 cut(s) | 2929 |
| MroXI | GAANNNNTTC | 6 cut(s) | 548, 592, 609, 1068, 1257, 2249 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2679, 2772 |
| MspA1I | CMGCKG | 1 cut(s) | 2960 |
| MspCI | CTTAAG | 1 cut(s) | 1528 |
| MspI | CCGG | 6 cut(s) | 91, 1736, 2012, 2228, 2604, 2930 |
| MunI | CAATTG | 2 cut(s) | 207, 929 |
| Mva1269I | GAATGC | 2 cut(s) | 302, 2116 |
| MvaI | CCWGG | 9 cut(s) | 581, 626, 1284, 1373, 1391, 2286, 2319, 2382, 2727 |
| MvnI | CGCG | 2 cut(s) | 2483, 3144 |
| NaeI | GCCGGC | 1 cut(s) | 2931 |
| NciI | CCSGG | 3 cut(s) | 91, 2013, 2604 |
| NdeI | CATATG | 2 cut(s) | 25, 55 |
| NgoMIV | GCCGGC | 1 cut(s) | 2929 |
| NheI | GCTAGC | 1 cut(s) | 2938 |
| NlaIV | GGNNCC | 3 cut(s) | 1846, 2594, 2811 |
| NmeAIII | GCCGAG | 1 cut(s) | 1289 |
| NmuCI | GTSAC | 3 cut(s) | 881, 1502, 3011 |
| NsiI | ATGCAT | 4 cut(s) | 256, 302, 1227, 1805 |
| NspV | TTCGAA | 1 cut(s) | 2199 |
| PagI | TCATGA | 1 cut(s) | 847 |
| PciSI | GCTCTTC | 2 cut(s) | 1272, 1761 |
| PctI | GAATGC | 2 cut(s) | 302, 2116 |
| PdiI | GCCGGC | 1 cut(s) | 2931 |
| PdmI | GAANNNNTTC | 6 cut(s) | 548, 592, 609, 1068, 1257, 2249 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1243 |
| PfoI | TCCNGGA | 4 cut(s) | 1371, 1389, 2317, 2380 |
| PkrI | GCNGC | 6 cut(s) | 740, 1295, 2063, 2848, 2959, 2968 |
| Ple19I | CGATCG | 1 cut(s) | 2718 |
| PleI | GAGTC | 1 cut(s) | 1586 |
| PpsI | GAGTC | 1 cut(s) | 1586 |
| PshBI | ATTAAT | 1 cut(s) | 342 |
| PsiI | TTATAA | 1 cut(s) | 1311 |
| Psp1406I | AACGTT | 1 cut(s) | 3153 |
| Psp6I | CCWGG | 9 cut(s) | 579, 624, 1282, 1371, 1389, 2284, 2317, 2380, 2725 |
| PspFI | CCCAGC | 1 cut(s) | 817 |
| PspGI | CCWGG | 9 cut(s) | 579, 624, 1282, 1371, 1389, 2284, 2317, 2380, 2725 |
| PspN4I | GGNNCC | 3 cut(s) | 1846, 2594, 2811 |
| PspPI | GGNCC | 2 cut(s) | 1375, 2723 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 594, 626, 828, 860 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2852 |
| PsuI | RGATCY | 4 cut(s) | 508, 566, 1187, 2440 |
| PvuI | CGATCG | 1 cut(s) | 2718 |
| RsaI | GTAC | 5 cut(s) | 30, 237, 500, 2069, 2765 |
| RsaNI | GTAC | 5 cut(s) | 29, 236, 499, 2068, 2764 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2679, 2772 |
| SapI | GCTCTTC | 2 cut(s) | 1272, 1761 |
| SatI | GCNGC | 6 cut(s) | 739, 1294, 2062, 2847, 2958, 2967 |
| Sau96I | GGNCC | 2 cut(s) | 1375, 2723 |
| SchI | GAGTC | 1 cut(s) | 1586 |
| SduI | GDGCHC | 2 cut(s) | 1967, 2814 |
| SexAI | ACCWGGT | 1 cut(s) | 579 |
| SfaNI | GCATC | 5 cut(s) | 263, 804, 1212, 1342, 2515 |
| SfcI | CTRYAG | 2 cut(s) | 2436, 2662 |
| SfuI | TTCGAA | 1 cut(s) | 2199 |
| SinI | GGWCC | 1 cut(s) | 1375 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2679, 2772 |
| SmlI | CTYRAG | 3 cut(s) | 1469, 1528, 3137 |
| SmoI | CTYRAG | 3 cut(s) | 1469, 1528, 3137 |
| SsiI | CCGC | 5 cut(s) | 496, 2933, 2960, 2966, 3042 |
| SspMI | CTAG | 7 cut(s) | 506, 810, 993, 2838, 2939, 2976, 3191 |
| TaaI | ACNGT | 3 cut(s) | 161, 1417, 2854 |
| TaiI | ACGT | 3 cut(s) | 1398, 2151, 3156 |
| TaqI | TCGA | 8 cut(s) | 1445, 1611, 2049, 2103, 2199, 2290, 2353, 2718 |
| TatI | WGTACW | 1 cut(s) | 235 |
| TauI | GCSGC | 1 cut(s) | 2969 |
| TscAI | CASTG | 7 cut(s) | 1362, 1605, 1675, 1967, 2063, 2508, 2949 |
| TseFI | GTSAC | 3 cut(s) | 881, 1502, 3011 |
| TseI | GCWGC | 5 cut(s) | 738, 1293, 2061, 2846, 2957 |
| Tsp45I | GTSAC | 3 cut(s) | 881, 1502, 3011 |
| TspGWI | ACGGA | 2 cut(s) | 2176, 3191 |
| TspRI | CASTG | 7 cut(s) | 1362, 1605, 1675, 1967, 2063, 2508, 2949 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1243 |
| Vha464I | CTTAAG | 1 cut(s) | 1528 |
| VpaK11BI | GGWCC | 1 cut(s) | 1375 |
| VspI | ATTAAT | 1 cut(s) | 342 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1583 |
| XapI | RAATTY | 6 cut(s) | 481, 731, 1429, 2164, 2300, 2702 |
| XmiI | GTMKAC | 1 cut(s) | 1573 |
| XmnI | GAANNNNTTC | 6 cut(s) | 548, 592, 609, 1068, 1257, 2249 |
| XspI | CTAG | 7 cut(s) | 506, 810, 993, 2838, 2939, 2976, 3191 |
| Zsp2I | ATGCAT | 4 cut(s) | 256, 302, 1227, 1805 |