TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1374 |
| AccI | GTMKAC | 1 cut(s) | 316 |
| AccIII | TCCGGA | 1 cut(s) | 696 |
| AciI | CCGC | 4 cut(s) | 361, 1062, 1317, 1369 |
| AclWI | GGATC | 1 cut(s) | 133 |
| AcuI | CTGAAG | 3 cut(s) | 210, 989, 1333 |
| AfaI | GTAC | 2 cut(s) | 508, 834 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 250, 604 |
| AgsI | TTSAA | 8 cut(s) | 140, 170, 332, 415, 476, 500, 626, 1403 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 9 cut(s) | 214, 297, 490, 518, 869, 944, 1111, 1222, 1347 |
| AluI | AGCT | 9 cut(s) | 214, 297, 490, 518, 869, 944, 1111, 1222, 1347 |
| Alw26I | GTCTC | 2 cut(s) | 694, 1034 |
| AlwI | GGATC | 1 cut(s) | 133 |
| Ama87I | CYCGRG | 3 cut(s) | 482, 1160, 1271 |
| Aor13HI | TCCGGA | 1 cut(s) | 696 |
| AoxI | GGCC | 1 cut(s) | 253 |
| ApaI | GGGCCC | 1 cut(s) | 257 |
| ApeKI | GCWGC | 3 cut(s) | 645, 1111, 1222 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 692, 1376 |
| AspS9I | GGNCC | 4 cut(s) | 253, 254, 453, 531 |
| AsuHPI | GGTGA | 3 cut(s) | 371, 911, 914 |
| AvaI | CYCGRG | 3 cut(s) | 482, 1160, 1271 |
| AvaII | GGWCC | 2 cut(s) | 453, 531 |
| BaeGI | GKGCMC | 1 cut(s) | 257 |
| BanII | GRGCYC | 1 cut(s) | 257 |
| BbvCI | CCTCAGC | 1 cut(s) | 215 |
| BbvI | GCAGC | 3 cut(s) | 632, 1098, 1209 |
| BccI | CCATC | 2 cut(s) | 383, 793 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BciVI | GTATCC | 1 cut(s) | 312 |
| BclI | TGATCA | 1 cut(s) | 376 |
| BcoDI | GTCTC | 2 cut(s) | 694, 1034 |
| BfaI | CTAG | 3 cut(s) | 870, 1196, 1307 |
| BfmI | CTRYAG | 3 cut(s) | 1135, 1223, 1246 |
| BfuAI | ACCTGC | 1 cut(s) | 1374 |
| BfuI | GTATCC | 1 cut(s) | 312 |
| BglII | AGATCT | 2 cut(s) | 1198, 1309 |
| BisI | GCNGC | 4 cut(s) | 362, 646, 1112, 1223 |
| BlsI | GCNGC | 4 cut(s) | 363, 647, 1113, 1224 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| Bme18I | GGWCC | 2 cut(s) | 453, 531 |
| BmeT110I | CYCGRG | 3 cut(s) | 482, 1160, 1271 |
| BmgT120I | GGNCC | 4 cut(s) | 253, 254, 453, 531 |
| BmiI | GGNNCC | 3 cut(s) | 255, 256, 455 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmsI | GCATC | 2 cut(s) | 271, 1101 |
| BoxI | GACNNNNGTC | 1 cut(s) | 46 |
| Bpu10I | CCTNAGC | 1 cut(s) | 215 |
| BpuEI | CTTGAG | 3 cut(s) | 811, 1148, 1259 |
| Bsa29I | ATCGAT | 1 cut(s) | 423 |
| BsaAI | YACGTR | 1 cut(s) | 752 |
| BsaI | GGTCTC | 1 cut(s) | 1034 |
| BsaJI | CCNNGG | 3 cut(s) | 1017, 1161, 1272 |
| BsaWI | WCCGGW | 2 cut(s) | 334, 696 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 250, 604 |
| Bse3DI | GCAATG | 2 cut(s) | 534, 1416 |
| BseAI | TCCGGA | 1 cut(s) | 696 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseCI | ATCGAT | 1 cut(s) | 423 |
| BseDI | CCNNGG | 3 cut(s) | 1017, 1161, 1272 |
| BseGI | GGATG | 2 cut(s) | 343, 394 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 250, 604 |
| BseMI | GCAATG | 2 cut(s) | 534, 1416 |
| BseMII | CTCAG | 3 cut(s) | 206, 559, 756 |
| BseRI | GAGGAG | 1 cut(s) | 779 |
| BseSI | GKGCMC | 1 cut(s) | 257 |
| BseXI | GCAGC | 3 cut(s) | 632, 1098, 1209 |
| BshFI | GGCC | 1 cut(s) | 255 |
| BshVI | ATCGAT | 1 cut(s) | 423 |
| BsiHKCI | CYCGRG | 3 cut(s) | 482, 1160, 1271 |
| BsiSI | CCGG | 2 cut(s) | 335, 697 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 250, 604 |
| BsmAI | GTCTC | 2 cut(s) | 694, 1034 |
| BsmI | GAATGC | 2 cut(s) | 194, 277 |
| BsnI | GGCC | 1 cut(s) | 255 |
| Bso31I | GGTCTC | 1 cut(s) | 1034 |
| BsoBI | CYCGRG | 3 cut(s) | 482, 1160, 1271 |
| Bsp120I | GGGCCC | 1 cut(s) | 253 |
| Bsp1286I | GDGCHC | 1 cut(s) | 257 |
| Bsp13I | TCCGGA | 1 cut(s) | 696 |
| Bsp1407I | TGTACA | 1 cut(s) | 506 |
| Bsp143I | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| BspACI | CCGC | 4 cut(s) | 361, 1062, 1317, 1369 |
| BspANI | GGCC | 1 cut(s) | 255 |
| BspCNI | CTCAG | 3 cut(s) | 207, 558, 755 |
| BspDI | ATCGAT | 1 cut(s) | 423 |
| BspEI | TCCGGA | 1 cut(s) | 696 |
| BspLI | GGNNCC | 3 cut(s) | 255, 256, 455 |
| BspMAI | CTGCAG | 3 cut(s) | 1139, 1227, 1250 |
| BspMI | ACCTGC | 1 cut(s) | 1374 |
| BspPI | GGATC | 1 cut(s) | 133 |
| BspTNI | GGTCTC | 1 cut(s) | 1034 |
| BsrDI | GCAATG | 2 cut(s) | 534, 1416 |
| BsrGI | TGTACA | 1 cut(s) | 506 |
| BssECI | CCNNGG | 3 cut(s) | 1017, 1161, 1272 |
| BssMI | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| BssT1I | CCWWGG | 1 cut(s) | 1017 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 3 cut(s) | 156, 578, 721 |
| Bst6I | CTCTTC | 1 cut(s) | 165 |
| BstAUI | TGTACA | 1 cut(s) | 506 |
| BstBAI | YACGTR | 1 cut(s) | 752 |
| BstC8I | GCNNGC | 4 cut(s) | 111, 1090, 1345, 1413 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 248 |
| BstF5I | GGATG | 2 cut(s) | 343, 394 |
| BstKTI | GATC | 7 cut(s) | 128, 379, 427, 875, 1201, 1312, 1429 |
| BstMAI | GTCTC | 2 cut(s) | 694, 1034 |
| BstMBI | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 220, 866, 1108, 1219 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstNSI | RCATGY | 2 cut(s) | 107, 113 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 46 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 3 cut(s) | 1135, 1223, 1246 |
| BstSLI | GKGCMC | 1 cut(s) | 257 |
| BstSNI | TACGTA | 1 cut(s) | 752 |
| BstV1I | GCAGC | 3 cut(s) | 632, 1098, 1209 |
| BstX2I | RGATCY | 2 cut(s) | 1198, 1309 |
| BstYI | RGATCY | 2 cut(s) | 1198, 1309 |
| Bsu15I | ATCGAT | 1 cut(s) | 423 |
| BsuI | GTATCC | 1 cut(s) | 312 |
| BsuRI | GGCC | 1 cut(s) | 255 |
| BsuTUI | ATCGAT | 1 cut(s) | 423 |
| BtsCI | GGATG | 2 cut(s) | 343, 394 |
| BtsI | GCAGTG | 2 cut(s) | 178, 1213 |
| BtsIMutI | CAGTG | 5 cut(s) | 178, 825, 1102, 1213, 1357 |
| BveI | ACCTGC | 1 cut(s) | 1374 |
| Cac8I | GCNNGC | 4 cut(s) | 111, 1090, 1345, 1413 |
| Cfr13I | GGNCC | 4 cut(s) | 253, 254, 453, 531 |
| ClaI | ATCGAT | 1 cut(s) | 423 |
| Csp6I | GTAC | 2 cut(s) | 507, 833 |
| CviAII | CATG | 5 cut(s) | 5, 27, 104, 110, 876 |
| CviQI | GTAC | 2 cut(s) | 507, 833 |
| DpnI | GATC | 7 cut(s) | 127, 378, 426, 874, 1200, 1311, 1428 |
| DpnII | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| DraI | TTTAAA | 4 cut(s) | 564, 978, 1122, 1233 |
| Eam1104I | CTCTTC | 1 cut(s) | 165 |
| EarI | CTCTTC | 1 cut(s) | 165 |
| Eco105I | TACGTA | 1 cut(s) | 752 |
| Eco130I | CCWWGG | 1 cut(s) | 1017 |
| Eco24I | GRGCYC | 1 cut(s) | 257 |
| Eco31I | GGTCTC | 1 cut(s) | 1034 |
| Eco32I | GATATC | 1 cut(s) | 97 |
| Eco47I | GGWCC | 2 cut(s) | 453, 531 |
| Eco57I | CTGAAG | 3 cut(s) | 210, 989, 1333 |
| Eco88I | CYCGRG | 3 cut(s) | 482, 1160, 1271 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 248 |
| EcoO109I | RGGNCCY | 3 cut(s) | 253, 254, 453 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| EcoRV | GATATC | 1 cut(s) | 97 |
| EcoT14I | CCWWGG | 1 cut(s) | 1017 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 257 |
| ErhI | CCWWGG | 1 cut(s) | 1017 |
| FaeI | CATG | 5 cut(s) | 8, 30, 107, 113, 879 |
| FatI | CATG | 5 cut(s) | 4, 26, 103, 109, 875 |
| FbaI | TGATCA | 1 cut(s) | 376 |
| FblI | GTMKAC | 1 cut(s) | 316 |
| Fnu4HI | GCNGC | 4 cut(s) | 362, 646, 1112, 1223 |
| FokI | GGATG | 2 cut(s) | 350, 401 |
| FriOI | GRGCYC | 1 cut(s) | 257 |
| Fsp4HI | GCNGC | 4 cut(s) | 362, 646, 1112, 1223 |
| FspBI | CTAG | 3 cut(s) | 870, 1196, 1307 |
| GluI | GCNGC | 4 cut(s) | 362, 646, 1112, 1223 |
| HaeIII | GGCC | 1 cut(s) | 255 |
| HapII | CCGG | 2 cut(s) | 335, 697 |
| Hin1II | CATG | 5 cut(s) | 8, 30, 107, 113, 879 |
| HindIII | AAGCTT | 1 cut(s) | 1345 |
| HinfI | GANTC | 6 cut(s) | 47, 523, 592, 617, 664, 803 |
| HpaII | CCGG | 2 cut(s) | 335, 697 |
| HphI | GGTGA | 3 cut(s) | 371, 911, 914 |
| Hpy166II | GTNNAC | 1 cut(s) | 317 |
| Hpy188I | TCNGA | 4 cut(s) | 130, 270, 548, 969 |
| Hpy8I | GTNNAC | 1 cut(s) | 317 |
| HpyAV | CCTTC | 9 cut(s) | 134, 494, 543, 747, 895, 964, 998, 1091, 1346 |
| HpyCH4III | ACNGT | 3 cut(s) | 156, 578, 721 |
| HpyCH4IV | ACGT | 1 cut(s) | 751 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 220, 866, 1108, 1219 |
| HpySE526I | ACGT | 1 cut(s) | 751 |
| Hsp92II | CATG | 5 cut(s) | 8, 30, 107, 113, 879 |
| Kpn2I | TCCGGA | 1 cut(s) | 696 |
| Ksp22I | TGATCA | 1 cut(s) | 376 |
| Kzo9I | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| LmnI | GCTCC | 2 cut(s) | 294, 1007 |
| Lsp1109I | GCAGC | 3 cut(s) | 632, 1098, 1209 |
| LweI | GCATC | 2 cut(s) | 271, 1101 |
| MaeI | CTAG | 3 cut(s) | 870, 1196, 1307 |
| MaeII | ACGT | 1 cut(s) | 751 |
| MaeIII | GTNAC | 1 cut(s) | 431 |
| MalI | GATC | 7 cut(s) | 127, 378, 426, 874, 1200, 1311, 1428 |
| MboI | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| MboII | GAAGA | 3 cut(s) | 182, 257, 880 |
| MfeI | CAATTG | 1 cut(s) | 135 |
| MflI | RGATCY | 2 cut(s) | 1198, 1309 |
| MhlI | GDGCHC | 1 cut(s) | 257 |
| MlyI | GAGTC | 1 cut(s) | 56 |
| MmeI | TCCRAC | 1 cut(s) | 658 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroI | TCCGGA | 1 cut(s) | 696 |
| MroXI | GAANNNNTTC | 2 cut(s) | 692, 1376 |
| MseI | TTAA | 8 cut(s) | 278, 563, 570, 710, 776, 977, 1121, 1232 |
| MslI | CAYNNNNRTG | 2 cut(s) | 108, 203 |
| MspI | CCGG | 2 cut(s) | 335, 697 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| MunI | CAATTG | 1 cut(s) | 135 |
| Mva1269I | GAATGC | 2 cut(s) | 194, 277 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 220, 866, 1108, 1219 |
| NdeII | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| NlaIII | CATG | 5 cut(s) | 8, 30, 107, 113, 879 |
| NlaIV | GGNNCC | 3 cut(s) | 255, 256, 455 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 107, 113 |
| PaeI | GCATGC | 1 cut(s) | 113 |
| PaeR7I | CTCGAG | 1 cut(s) | 482 |
| PctI | GAATGC | 2 cut(s) | 194, 277 |
| PdmI | GAANNNNTTC | 2 cut(s) | 692, 1376 |
| PfeI | GAWTC | 5 cut(s) | 523, 592, 617, 664, 803 |
| PkrI | GCNGC | 4 cut(s) | 363, 647, 1113, 1224 |
| PleI | GAGTC | 1 cut(s) | 55 |
| PpsI | GAGTC | 1 cut(s) | 55 |
| Ppu21I | YACGTR | 1 cut(s) | 752 |
| PpuMI | RGGWCCY | 1 cut(s) | 453 |
| PshAI | GACNNNNGTC | 1 cut(s) | 46 |
| Psp5II | RGGWCCY | 1 cut(s) | 453 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 3 cut(s) | 255, 256, 455 |
| PspOMI | GGGCCC | 1 cut(s) | 253 |
| PspPI | GGNCC | 4 cut(s) | 253, 254, 453, 531 |
| PspPPI | RGGWCCY | 1 cut(s) | 453 |
| PstI | CTGCAG | 3 cut(s) | 1139, 1227, 1250 |
| PsuI | RGATCY | 2 cut(s) | 1198, 1309 |
| RsaI | GTAC | 2 cut(s) | 508, 834 |
| RsaNI | GTAC | 2 cut(s) | 507, 833 |
| RseI | CAYNNNNRTG | 2 cut(s) | 108, 203 |
| SaqAI | TTAA | 8 cut(s) | 278, 563, 570, 710, 776, 977, 1121, 1232 |
| SatI | GCNGC | 4 cut(s) | 362, 646, 1112, 1223 |
| Sau3AI | GATC | 7 cut(s) | 125, 376, 424, 872, 1198, 1309, 1426 |
| Sau96I | GGNCC | 4 cut(s) | 253, 254, 453, 531 |
| SchI | GAGTC | 1 cut(s) | 56 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SduI | GDGCHC | 1 cut(s) | 257 |
| SfaNI | GCATC | 2 cut(s) | 271, 1101 |
| SfcI | CTRYAG | 3 cut(s) | 1135, 1223, 1246 |
| Sfr274I | CTCGAG | 1 cut(s) | 482 |
| SinI | GGWCC | 2 cut(s) | 453, 531 |
| SlaI | CTCGAG | 1 cut(s) | 482 |
| SmiI | ATTTAAAT | 3 cut(s) | 978, 1122, 1233 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 108, 203 |
| SmlI | CTYRAG | 4 cut(s) | 482, 790, 1127, 1238 |
| SmoI | CTYRAG | 4 cut(s) | 482, 790, 1127, 1238 |
| SnaBI | TACGTA | 1 cut(s) | 752 |
| SphI | GCATGC | 1 cut(s) | 113 |
| SsiI | CCGC | 4 cut(s) | 361, 1062, 1317, 1369 |
| SspMI | CTAG | 3 cut(s) | 870, 1196, 1307 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| StyI | CCWWGG | 1 cut(s) | 1017 |
| SwaI | ATTTAAAT | 3 cut(s) | 978, 1122, 1233 |
| TaaI | ACNGT | 3 cut(s) | 156, 578, 721 |
| TaiI | ACGT | 1 cut(s) | 754 |
| TaqI | TCGA | 4 cut(s) | 40, 225, 423, 483 |
| TatI | WGTACW | 1 cut(s) | 506 |
| TauI | GCSGC | 1 cut(s) | 364 |
| TfiI | GAWTC | 5 cut(s) | 523, 592, 617, 664, 803 |
| Tru1I | TTAA | 8 cut(s) | 278, 563, 570, 710, 776, 977, 1121, 1232 |
| Tru9I | TTAA | 8 cut(s) | 278, 563, 570, 710, 776, 977, 1121, 1232 |
| TscAI | CASTG | 5 cut(s) | 185, 825, 1102, 1213, 1357 |
| TseI | GCWGC | 3 cut(s) | 645, 1111, 1222 |
| TspDTI | ATGAA | 4 cut(s) | 221, 354, 515, 701 |
| TspRI | CASTG | 5 cut(s) | 185, 825, 1102, 1213, 1357 |
| VpaK11BI | GGWCC | 2 cut(s) | 453, 531 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 248 |
| XceI | RCATGY | 2 cut(s) | 107, 113 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 873 |
| XhoI | CTCGAG | 1 cut(s) | 482 |
| XmiI | GTMKAC | 1 cut(s) | 316 |
| XmnI | GAANNNNTTC | 2 cut(s) | 692, 1376 |
| XspI | CTAG | 3 cut(s) | 870, 1196, 1307 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |