TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 197 | 2.7e-51 | TIR domain |
| TIR_2 | PF13676 | 22 - 119 | 3.5e-14 | TIR domain |
| NB-ARC | PF00931 | 216 - 370 | 4.9e-18 | NB-ARC domain |
| NACHT | PF05729 | 228 - 362 | 2e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 437 - 505 | 1.6e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 664 - 751 | 2.6e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 708 - 874 | 3.4e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_8 | PF13855 | 787 - 845 | 4.6e-06 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 992 |
| AarI | CACCTGC | 2 cut(s) | 2344, 4061 |
| Acc36I | ACCTGC | 2 cut(s) | 2344, 4061 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1412 |
| AccI | GTMKAC | 2 cut(s) | 3030, 3205 |
| AciI | CCGC | 4 cut(s) | 1560, 2864, 3314, 3410 |
| AclWI | GGATC | 4 cut(s) | 344, 992, 1603, 3076 |
| AcoI | YGGCCR | 1 cut(s) | 474 |
| AcsI | RAATTY | 8 cut(s) | 2097, 2136, 2374, 2449, 2814, 2941, 3540, 3911 |
| AcuI | CTGAAG | 5 cut(s) | 1469, 2042, 2501, 3360, 3467 |
| AcvI | CACGTG | 1 cut(s) | 3785 |
| AdeI | CACNNNGTG | 1 cut(s) | 3508 |
| AfaI | GTAC | 5 cut(s) | 402, 2754, 2772, 3422, 3682 |
| AfeI | AGCGCT | 1 cut(s) | 413 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1412, 2256, 2321, 3536, 3602, 3603 |
| AflIII | ACRYGT | 2 cut(s) | 2427, 2697 |
| AgeI | ACCGGT | 1 cut(s) | 1793 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2428 |
| AjnI | CCWGG | 5 cut(s) | 1531, 2314, 3010, 3833, 4040 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 946, 978 |
| AleI | CACNNNNGTG | 2 cut(s) | 1940, 3100 |
| Alw21I | GWGCWC | 4 cut(s) | 1713, 1756, 2809, 3202 |
| Alw26I | GTCTC | 5 cut(s) | 1526, 1916, 3251, 3446, 4041 |
| AlwI | GGATC | 4 cut(s) | 344, 992, 1603, 3076 |
| Ama87I | CYCGRG | 2 cut(s) | 468, 3337 |
| Aor51HI | AGCGCT | 1 cut(s) | 413 |
| AoxI | GGCC | 4 cut(s) | 474, 1165, 1723, 3992 |
| ApoI | RAATTY | 8 cut(s) | 2097, 2136, 2374, 2449, 2814, 2941, 3540, 3911 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 256, 288 |
| AseI | ATTAAT | 1 cut(s) | 2883 |
| AsiGI | ACCGGT | 1 cut(s) | 1793 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 210, 1097, 1506, 1862, 2848, 3480, 3525 |
| AspLEI | GCGC | 3 cut(s) | 414, 1570, 2670 |
| AspS9I | GGNCC | 3 cut(s) | 1165, 2422, 3008 |
| AsuHPI | GGTGA | 4 cut(s) | 95, 1384, 1988, 2325 |
| AsuII | TTCGAA | 1 cut(s) | 1432 |
| AvaI | CYCGRG | 2 cut(s) | 468, 3337 |
| AvaII | GGWCC | 2 cut(s) | 2422, 3008 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1568, 1601 |
| BalI | TGGCCA | 1 cut(s) | 476 |
| BanII | GRGCYC | 3 cut(s) | 1756, 2407, 2809 |
| BauI | CACGAG | 4 cut(s) | 2808, 3035, 3261, 4063 |
| BbrPI | CACGTG | 1 cut(s) | 3785 |
| Bbv12I | GWGCWC | 4 cut(s) | 1713, 1756, 2809, 3202 |
| BceAI | ACGGC | 1 cut(s) | 3614 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3026, 3060, 3245, 3279 |
| BciT130I | CCWGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| BciVI | GTATCC | 2 cut(s) | 82, 2320 |
| BclI | TGATCA | 3 cut(s) | 745, 1108, 2617 |
| BcoDI | GTCTC | 5 cut(s) | 1526, 1916, 3251, 3446, 4041 |
| BfaI | CTAG | 6 cut(s) | 128, 215, 1721, 1823, 2640, 3531 |
| BfmI | CTRYAG | 3 cut(s) | 648, 3556, 3996 |
| BfoI | RGCGCY | 1 cut(s) | 415 |
| BfuAI | ACCTGC | 2 cut(s) | 2344, 4061 |
| BfuI | GTATCC | 2 cut(s) | 82, 2320 |
| BglII | AGATCT | 1 cut(s) | 1825 |
| BlpI | GCTNAGC | 1 cut(s) | 557 |
| BmcAI | AGTACT | 1 cut(s) | 3422 |
| Bme1390I | CCNGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| Bme18I | GGWCC | 2 cut(s) | 2422, 3008 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2428 |
| BmeT110I | CYCGRG | 2 cut(s) | 468, 3337 |
| BmgT120I | GGNCC | 3 cut(s) | 1165, 2422, 3008 |
| BmiI | GGNNCC | 1 cut(s) | 2404 |
| BmrFI | CCNGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| BmrI | ACTGGG | 1 cut(s) | 3612 |
| BmuI | ACTGGG | 1 cut(s) | 3612 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2079 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3184, 3216 |
| BpmI | CTGGAG | 1 cut(s) | 4063 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1622 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 557 |
| Bpu14I | TTCGAA | 1 cut(s) | 1432 |
| BpuEI | CTTGAG | 2 cut(s) | 229, 1617 |
| BsaAI | YACGTR | 1 cut(s) | 3785 |
| BsaBI | GATNNNNATC | 2 cut(s) | 348, 2616 |
| BsaJI | CCNNGG | 5 cut(s) | 1532, 2314, 3000, 3573, 4040 |
| BsaWI | WCCGGW | 1 cut(s) | 1793 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1412, 2256, 2321, 3536, 3602, 3603 |
| Bse118I | RCCGGY | 1 cut(s) | 1793 |
| Bse1I | ACTGG | 6 cut(s) | 379, 2593, 2774, 2952, 3070, 3607 |
| Bse3DI | GCAATG | 1 cut(s) | 3938 |
| Bse8I | GATNNNNATC | 2 cut(s) | 348, 2616 |
| BseBI | CCWGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| BseDI | CCNNGG | 5 cut(s) | 1532, 2314, 3000, 3573, 4040 |
| BseJI | GATNNNNATC | 2 cut(s) | 348, 2616 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1412, 2256, 2321, 3536, 3602, 3603 |
| BseMI | GCAATG | 1 cut(s) | 3938 |
| BseNI | ACTGG | 6 cut(s) | 379, 2593, 2774, 2952, 3070, 3607 |
| BseRI | GAGGAG | 2 cut(s) | 10, 13 |
| BsgI | GTGCAG | 1 cut(s) | 3887 |
| BshFI | GGCC | 4 cut(s) | 476, 1167, 1725, 3994 |
| BshTI | ACCGGT | 1 cut(s) | 1793 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1713, 1756, 2809, 3202 |
| BsiHKCI | CYCGRG | 2 cut(s) | 468, 3337 |
| BsiSI | CCGG | 1 cut(s) | 1794 |
| BslFI | GGGAC | 5 cut(s) | 19, 170, 1016, 1241, 2087 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1412, 2256, 2321, 3536, 3602, 3603 |
| BsmAI | GTCTC | 5 cut(s) | 1526, 1916, 3251, 3446, 4041 |
| BsmFI | GGGAC | 5 cut(s) | 19, 170, 1016, 1241, 2087 |
| BsmI | GAATGC | 1 cut(s) | 3392 |
| BsnI | GGCC | 4 cut(s) | 476, 1167, 1725, 3994 |
| BsoBI | CYCGRG | 2 cut(s) | 468, 3337 |
| Bsp119I | TTCGAA | 1 cut(s) | 1432 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1713, 1756, 2407, 2809, 3202 |
| Bsp1407I | TGTACA | 1 cut(s) | 400 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 557 |
| Bsp19I | CCATGG | 1 cut(s) | 3000 |
| BspACI | CCGC | 4 cut(s) | 1560, 2864, 3314, 3410 |
| BspANI | GGCC | 4 cut(s) | 476, 1167, 1725, 3994 |
| BspHI | TCATGA | 1 cut(s) | 1588 |
| BspLI | GGNNCC | 1 cut(s) | 2404 |
| BspMAI | CTGCAG | 1 cut(s) | 3560 |
| BspMI | ACCTGC | 2 cut(s) | 2344, 4061 |
| BspPI | GGATC | 4 cut(s) | 344, 992, 1603, 3076 |
| BspQI | GCTCTTC | 2 cut(s) | 159, 402 |
| BspT104I | TTCGAA | 1 cut(s) | 1432 |
| BsrDI | GCAATG | 1 cut(s) | 3938 |
| BsrFI | RCCGGY | 1 cut(s) | 1793 |
| BsrGI | TGTACA | 1 cut(s) | 400 |
| BsrI | ACTGG | 6 cut(s) | 379, 2593, 2774, 2952, 3070, 3607 |
| BssAI | RCCGGY | 1 cut(s) | 1793 |
| BssECI | CCNNGG | 5 cut(s) | 1532, 2314, 3000, 3573, 4040 |
| BssNAI | GTATAC | 1 cut(s) | 3031 |
| BssSI | CACGAG | 4 cut(s) | 2808, 3035, 3261, 4063 |
| BssT1I | CCWWGG | 1 cut(s) | 3000 |
| Bst1107I | GTATAC | 1 cut(s) | 3031 |
| Bst2BI | CACGAG | 4 cut(s) | 2808, 3035, 3261, 4063 |
| Bst2UI | CCWGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| Bst4CI | ACNGT | 7 cut(s) | 1232, 2048, 2743, 2968, 3028, 3640, 3680 |
| Bst6I | CTCTTC | 5 cut(s) | 40, 159, 402, 2166, 3214 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1480 |
| BstAUI | TGTACA | 1 cut(s) | 400 |
| BstBAI | YACGTR | 1 cut(s) | 3785 |
| BstBI | TTCGAA | 1 cut(s) | 1432 |
| BstC8I | GCNNGC | 2 cut(s) | 942, 1628 |
| BstDSI | CCRYGG | 1 cut(s) | 3000 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2319 |
| BstH2I | RGCGCY | 1 cut(s) | 415 |
| BstHHI | GCGC | 3 cut(s) | 414, 1570, 2670 |
| BstMAI | GTCTC | 5 cut(s) | 1526, 1916, 3251, 3446, 4041 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1480, 1819, 2259, 3626 |
| BstNI | CCWGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| BstNSI | RCATGY | 5 cut(s) | 1344, 2431, 2539, 2701, 3627 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2079 |
| BstSCI | CCNGG | 5 cut(s) | 1531, 2314, 3010, 3833, 4040 |
| BstSFI | CTRYAG | 3 cut(s) | 648, 3556, 3996 |
| BstX2I | RGATCY | 2 cut(s) | 349, 1825 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3102 |
| BstYI | RGATCY | 2 cut(s) | 349, 1825 |
| BstZ17I | GTATAC | 1 cut(s) | 3031 |
| BsuI | GTATCC | 2 cut(s) | 82, 2320 |
| BsuRI | GGCC | 4 cut(s) | 476, 1167, 1725, 3994 |
| BtgI | CCRYGG | 1 cut(s) | 3000 |
| BtgZI | GCGATG | 3 cut(s) | 2265, 2277, 3447 |
| BtsI | GCAGTG | 2 cut(s) | 285, 3565 |
| BtsIMutI | CAGTG | 5 cut(s) | 285, 1237, 2781, 3063, 3565 |
| BveI | ACCTGC | 2 cut(s) | 2344, 4061 |
| Cac8I | GCNNGC | 2 cut(s) | 942, 1628 |
| CciI | TCATGA | 1 cut(s) | 1588 |
| CfoI | GCGC | 3 cut(s) | 414, 1570, 2670 |
| Cfr10I | RCCGGY | 1 cut(s) | 1793 |
| Cfr13I | GGNCC | 3 cut(s) | 1165, 2422, 3008 |
| Csp6I | GTAC | 5 cut(s) | 401, 2753, 2771, 3421, 3681 |
| CspAI | ACCGGT | 1 cut(s) | 1793 |
| CviQI | GTAC | 5 cut(s) | 401, 2753, 2771, 3421, 3681 |
| DraI | TTTAAA | 3 cut(s) | 1779, 2871, 3591 |
| DraIII | CACNNNGTG | 1 cut(s) | 3508 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2428 |
| EaeI | YGGCCR | 1 cut(s) | 474 |
| Eam1104I | CTCTTC | 5 cut(s) | 40, 159, 402, 2166, 3214 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2428 |
| EarI | CTCTTC | 5 cut(s) | 40, 159, 402, 2166, 3214 |
| Ecl136II | GAGCTC | 2 cut(s) | 1754, 2807 |
| Eco130I | CCWWGG | 1 cut(s) | 3000 |
| Eco147I | AGGCCT | 2 cut(s) | 1725, 3994 |
| Eco24I | GRGCYC | 3 cut(s) | 1756, 2407, 2809 |
| Eco32I | GATATC | 2 cut(s) | 1772, 2735 |
| Eco47I | GGWCC | 2 cut(s) | 2422, 3008 |
| Eco47III | AGCGCT | 1 cut(s) | 413 |
| Eco53kI | GAGCTC | 2 cut(s) | 1754, 2807 |
| Eco57I | CTGAAG | 5 cut(s) | 1469, 2042, 2501, 3360, 3467 |
| Eco72I | CACGTG | 1 cut(s) | 3785 |
| Eco88I | CYCGRG | 2 cut(s) | 468, 3337 |
| EcoICRI | GAGCTC | 2 cut(s) | 1754, 2807 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2319 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1165, 3008 |
| EcoRI | GAATTC | 1 cut(s) | 3540 |
| EcoRII | CCWGG | 5 cut(s) | 1531, 2314, 3010, 3833, 4040 |
| EcoRV | GATATC | 2 cut(s) | 1772, 2735 |
| EcoT14I | CCWWGG | 1 cut(s) | 3000 |
| EcoT22I | ATGCAT | 3 cut(s) | 1476, 3725, 3781 |
| EcoT38I | GRGCYC | 3 cut(s) | 1756, 2407, 2809 |
| ErhI | CCWWGG | 1 cut(s) | 3000 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 813, 845, 1242, 1274, 3042, 3074 |
| FaqI | GGGAC | 5 cut(s) | 19, 170, 1016, 1241, 2087 |
| FauI | CCCGC | 2 cut(s) | 2871, 3403 |
| FauNDI | CATATG | 3 cut(s) | 58, 2684, 2788 |
| FbaI | TGATCA | 3 cut(s) | 745, 1108, 2617 |
| FblI | GTMKAC | 2 cut(s) | 3030, 3205 |
| FriOI | GRGCYC | 3 cut(s) | 1756, 2407, 2809 |
| FspBI | CTAG | 6 cut(s) | 128, 215, 1721, 1823, 2640, 3531 |
| GlaI | GCGC | 3 cut(s) | 413, 1569, 2669 |
| GsuI | CTGGAG | 1 cut(s) | 4063 |
| HaeII | RGCGCY | 1 cut(s) | 415 |
| HaeIII | GGCC | 4 cut(s) | 476, 1167, 1725, 3994 |
| HapII | CCGG | 1 cut(s) | 1794 |
| HhaI | GCGC | 3 cut(s) | 414, 1570, 2670 |
| Hin6I | GCGC | 3 cut(s) | 412, 1568, 2668 |
| HinP1I | GCGC | 3 cut(s) | 412, 1568, 2668 |
| HincII | GTYRAC | 2 cut(s) | 2270, 2662 |
| HindII | GTYRAC | 2 cut(s) | 2270, 2662 |
| HindIII | AAGCTT | 4 cut(s) | 1079, 1811, 2504, 2555 |
| HpaI | GTTAAC | 1 cut(s) | 2662 |
| HpaII | CCGG | 1 cut(s) | 1794 |
| HphI | GGTGA | 4 cut(s) | 95, 1384, 1988, 2325 |
| Hpy166II | GTNNAC | 7 cut(s) | 1996, 2270, 2662, 2771, 3031, 3206, 3938 |
| Hpy8I | GTNNAC | 7 cut(s) | 1996, 2270, 2662, 2771, 3031, 3206, 3938 |
| Hpy99I | CGWCG | 1 cut(s) | 4008 |
| HpyCH4III | ACNGT | 7 cut(s) | 1232, 2048, 2743, 2968, 3028, 3640, 3680 |
| HpyCH4IV | ACGT | 3 cut(s) | 926, 1657, 3784 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1480, 1819, 2259, 3626 |
| HpySE526I | ACGT | 3 cut(s) | 926, 1657, 3784 |
| HspAI | GCGC | 3 cut(s) | 412, 1568, 2668 |
| Ksp22I | TGATCA | 3 cut(s) | 745, 1108, 2617 |
| KspAI | GTTAAC | 1 cut(s) | 2662 |
| LguI | GCTCTTC | 2 cut(s) | 159, 402 |
| LmnI | GCTCC | 4 cut(s) | 1645, 1716, 2402, 2838 |
| MaeI | CTAG | 6 cut(s) | 128, 215, 1721, 1823, 2640, 3531 |
| MaeII | ACGT | 3 cut(s) | 926, 1657, 3784 |
| MaeIII | GTNAC | 7 cut(s) | 1040, 1372, 2331, 2381, 2598, 3014, 3789 |
| MfeI | CAATTG | 6 cut(s) | 291, 935, 961, 1010, 1649, 1890 |
| MflI | RGATCY | 2 cut(s) | 349, 1825 |
| MhlI | GDGCHC | 5 cut(s) | 1713, 1756, 2407, 2809, 3202 |
| MlsI | TGGCCA | 1 cut(s) | 476 |
| MluNI | TGGCCA | 1 cut(s) | 476 |
| MlyI | GAGTC | 7 cut(s) | 419, 460, 521, 1898, 2183, 3253, 3329 |
| MmeI | TCCRAC | 7 cut(s) | 595, 931, 1070, 1365, 2157, 2502, 3099 |
| Mox20I | TGGCCA | 1 cut(s) | 476 |
| Mph1103I | ATGCAT | 3 cut(s) | 1476, 3725, 3781 |
| MroXI | GAANNNNTTC | 7 cut(s) | 210, 1097, 1506, 1862, 2848, 3480, 3525 |
| MscI | TGGCCA | 1 cut(s) | 476 |
| MslI | CAYNNNNRTG | 9 cut(s) | 117, 585, 864, 1940, 2696, 3100, 3767, 3863, 3947 |
| Msp20I | TGGCCA | 1 cut(s) | 476 |
| MspA1I | CMGCKG | 1 cut(s) | 1562 |
| MspI | CCGG | 1 cut(s) | 1794 |
| MspR9I | CCNGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| MunI | CAATTG | 6 cut(s) | 291, 935, 961, 1010, 1649, 1890 |
| Mva1269I | GAATGC | 1 cut(s) | 3392 |
| MvaI | CCWGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1480, 1819, 2259, 3626 |
| NcoI | CCATGG | 1 cut(s) | 3000 |
| NdeI | CATATG | 3 cut(s) | 58, 2684, 2788 |
| NlaIV | GGNNCC | 1 cut(s) | 2404 |
| NmeAIII | GCCGAG | 1 cut(s) | 3554 |
| NmuCI | GTSAC | 4 cut(s) | 1372, 2331, 2598, 3789 |
| NsiI | ATGCAT | 3 cut(s) | 1476, 3725, 3781 |
| NspI | RCATGY | 5 cut(s) | 1344, 2431, 2539, 2701, 3627 |
| NspV | TTCGAA | 1 cut(s) | 1432 |
| OliI | CACNNNNGTG | 2 cut(s) | 1940, 3100 |
| PaeR7I | CTCGAG | 2 cut(s) | 468, 3337 |
| PagI | TCATGA | 1 cut(s) | 1588 |
| PaqCI | CACCTGC | 2 cut(s) | 2344, 4061 |
| PceI | AGGCCT | 2 cut(s) | 1725, 3994 |
| PciI | ACATGT | 2 cut(s) | 2427, 2697 |
| PciSI | GCTCTTC | 2 cut(s) | 159, 402 |
| PctI | GAATGC | 1 cut(s) | 3392 |
| PdmI | GAANNNNTTC | 7 cut(s) | 210, 1097, 1506, 1862, 2848, 3480, 3525 |
| PflFI | GACNNNGTC | 1 cut(s) | 885 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1412 |
| PinAI | ACCGGT | 1 cut(s) | 1793 |
| PleI | GAGTC | 7 cut(s) | 419, 460, 520, 1898, 2182, 3253, 3329 |
| PmaCI | CACGTG | 1 cut(s) | 3785 |
| PmlI | CACGTG | 1 cut(s) | 3785 |
| PpsI | GAGTC | 7 cut(s) | 419, 460, 520, 1898, 2182, 3253, 3329 |
| Ppu21I | YACGTR | 1 cut(s) | 3785 |
| PpuMI | RGGWCCY | 1 cut(s) | 3008 |
| PscI | ACATGT | 2 cut(s) | 2427, 2697 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2079 |
| PshBI | ATTAAT | 1 cut(s) | 2883 |
| PsiI | TTATAA | 1 cut(s) | 992 |
| Psp124BI | GAGCTC | 2 cut(s) | 1756, 2809 |
| Psp5II | RGGWCCY | 1 cut(s) | 3008 |
| Psp6I | CCWGG | 5 cut(s) | 1531, 2314, 3010, 3833, 4040 |
| PspCI | CACGTG | 1 cut(s) | 3785 |
| PspGI | CCWGG | 5 cut(s) | 1531, 2314, 3010, 3833, 4040 |
| PspN4I | GGNNCC | 1 cut(s) | 2404 |
| PspPI | GGNCC | 3 cut(s) | 1165, 2422, 3008 |
| PspPPI | RGGWCCY | 1 cut(s) | 3008 |
| PspXI | VCTCGAGB | 2 cut(s) | 468, 3337 |
| PstI | CTGCAG | 1 cut(s) | 3560 |
| PsuI | RGATCY | 2 cut(s) | 349, 1825 |
| PsyI | GACNNNGTC | 1 cut(s) | 885 |
| RsaI | GTAC | 5 cut(s) | 402, 2754, 2772, 3422, 3682 |
| RsaNI | GTAC | 5 cut(s) | 401, 2753, 2771, 3421, 3681 |
| RseI | CAYNNNNRTG | 9 cut(s) | 117, 585, 864, 1940, 2696, 3100, 3767, 3863, 3947 |
| SacI | GAGCTC | 2 cut(s) | 1756, 2809 |
| SapI | GCTCTTC | 2 cut(s) | 159, 402 |
| Sau96I | GGNCC | 3 cut(s) | 1165, 2422, 3008 |
| ScaI | AGTACT | 1 cut(s) | 3422 |
| SchI | GAGTC | 7 cut(s) | 419, 460, 521, 1898, 2183, 3253, 3329 |
| ScrFI | CCNGG | 5 cut(s) | 1533, 2316, 3012, 3835, 4042 |
| SduI | GDGCHC | 5 cut(s) | 1713, 1756, 2407, 2809, 3202 |
| SfcI | CTRYAG | 3 cut(s) | 648, 3556, 3996 |
| Sfr274I | CTCGAG | 2 cut(s) | 468, 3337 |
| SfuI | TTCGAA | 1 cut(s) | 1432 |
| SinI | GGWCC | 2 cut(s) | 2422, 3008 |
| SlaI | CTCGAG | 2 cut(s) | 468, 3337 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 117, 585, 864, 1940, 2696, 3100, 3767, 3863, 3947 |
| SmlI | CTYRAG | 4 cut(s) | 244, 468, 1632, 3337 |
| SmoI | CTYRAG | 4 cut(s) | 244, 468, 1632, 3337 |
| SseBI | AGGCCT | 2 cut(s) | 1725, 3994 |
| SsiI | CCGC | 4 cut(s) | 1560, 2864, 3314, 3410 |
| SspI | AATATT | 3 cut(s) | 1326, 1380, 3491 |
| SspMI | CTAG | 6 cut(s) | 128, 215, 1721, 1823, 2640, 3531 |
| SstI | GAGCTC | 2 cut(s) | 1756, 2809 |
| StuI | AGGCCT | 2 cut(s) | 1725, 3994 |
| StyD4I | CCNGG | 5 cut(s) | 1531, 2314, 3010, 3833, 4040 |
| StyI | CCWWGG | 1 cut(s) | 3000 |
| TaaI | ACNGT | 7 cut(s) | 1232, 2048, 2743, 2968, 3028, 3640, 3680 |
| TaiI | ACGT | 3 cut(s) | 929, 1660, 3787 |
| TaqI | TCGA | 8 cut(s) | 79, 469, 973, 1032, 1296, 1432, 3147, 3338 |
| TatI | WGTACW | 3 cut(s) | 400, 3420, 3680 |
| TscAI | CASTG | 5 cut(s) | 292, 1237, 2781, 3070, 3565 |
| TseFI | GTSAC | 4 cut(s) | 1372, 2331, 2598, 3789 |
| Tsp45I | GTSAC | 4 cut(s) | 1372, 2331, 2598, 3789 |
| TspRI | CASTG | 5 cut(s) | 292, 1237, 2781, 3070, 3565 |
| Tth111I | GACNNNGTC | 1 cut(s) | 885 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1412 |
| VpaK11BI | GGWCC | 2 cut(s) | 2422, 3008 |
| VspI | ATTAAT | 1 cut(s) | 2883 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2319 |
| XapI | RAATTY | 8 cut(s) | 2097, 2136, 2374, 2449, 2814, 2941, 3540, 3911 |
| XbaI | TCTAGA | 1 cut(s) | 127 |
| XceI | RCATGY | 5 cut(s) | 1344, 2431, 2539, 2701, 3627 |
| XhoI | CTCGAG | 2 cut(s) | 468, 3337 |
| XmiI | GTMKAC | 2 cut(s) | 3030, 3205 |
| XmnI | GAANNNNTTC | 7 cut(s) | 210, 1097, 1506, 1862, 2848, 3480, 3525 |
| XspI | CTAG | 6 cut(s) | 128, 215, 1721, 1823, 2640, 3531 |
| ZrmI | AGTACT | 1 cut(s) | 3422 |
| Zsp2I | ATGCAT | 3 cut(s) | 1476, 3725, 3781 |