TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CHX17_2nd | PF23256 | 74 - 203 | 1.7e-12 | Plant cation/H(+) antiporter domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 606 |
| Acc36I | ACCTGC | 1 cut(s) | 149 |
| AclWI | GGATC | 2 cut(s) | 56, 600 |
| AcoI | YGGCCR | 1 cut(s) | 253 |
| AcsI | RAATTY | 2 cut(s) | 132, 413 |
| AcuI | CTGAAG | 1 cut(s) | 532 |
| AdeI | CACNNNGTG | 1 cut(s) | 286 |
| AfaI | GTAC | 2 cut(s) | 316, 555 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 289 |
| AgsI | TTSAA | 4 cut(s) | 27, 69, 112, 346 |
| AluBI | AGCT | 3 cut(s) | 127, 454, 566 |
| AluI | AGCT | 3 cut(s) | 127, 454, 566 |
| Alw21I | GWGCWC | 2 cut(s) | 129, 568 |
| AlwI | GGATC | 2 cut(s) | 56, 600 |
| AoxI | GGCC | 1 cut(s) | 253 |
| ApeKI | GCWGC | 2 cut(s) | 191, 371 |
| ApoI | RAATTY | 2 cut(s) | 132, 413 |
| AseI | ATTAAT | 2 cut(s) | 248, 498 |
| AspS9I | GGNCC | 2 cut(s) | 504, 612 |
| AvaII | GGWCC | 2 cut(s) | 504, 612 |
| BanII | GRGCYC | 2 cut(s) | 129, 568 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 41, 73 |
| BauI | CACGAG | 1 cut(s) | 32 |
| BbsI | GAAGAC | 2 cut(s) | 432, 528 |
| Bbv12I | GWGCWC | 2 cut(s) | 129, 568 |
| BbvI | GCAGC | 2 cut(s) | 203, 358 |
| BccI | CCATC | 1 cut(s) | 243 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 350, 384 |
| BclI | TGATCA | 1 cut(s) | 174 |
| BfaI | CTAG | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 168 |
| BfuAI | ACCTGC | 1 cut(s) | 149 |
| BisI | GCNGC | 2 cut(s) | 192, 372 |
| BlsI | GCNGC | 2 cut(s) | 193, 373 |
| Bme18I | GGWCC | 2 cut(s) | 504, 612 |
| BmgT120I | GGNCC | 2 cut(s) | 504, 612 |
| BmiI | GGNNCC | 1 cut(s) | 505 |
| BmsI | GCATC | 2 cut(s) | 153, 178 |
| BpiI | GAAGAC | 2 cut(s) | 432, 528 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 289 |
| Bse1I | ACTGG | 1 cut(s) | 507 |
| Bse3DI | GCAATG | 1 cut(s) | 450 |
| BseGI | GGATG | 1 cut(s) | 144 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 289 |
| BseMI | GCAATG | 1 cut(s) | 450 |
| BseNI | ACTGG | 1 cut(s) | 507 |
| BseX3I | CGGCCG | 1 cut(s) | 253 |
| BseXI | GCAGC | 2 cut(s) | 203, 358 |
| BsgI | GTGCAG | 1 cut(s) | 308 |
| Bsh1285I | CGRYCG | 1 cut(s) | 256 |
| BshFI | GGCC | 1 cut(s) | 255 |
| BsiEI | CGRYCG | 1 cut(s) | 256 |
| BsiHKAI | GWGCWC | 2 cut(s) | 129, 568 |
| BslFI | GGGAC | 2 cut(s) | 110, 612 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 289 |
| BsmFI | GGGAC | 2 cut(s) | 110, 612 |
| BsnI | GGCC | 1 cut(s) | 255 |
| Bsp1286I | GDGCHC | 2 cut(s) | 129, 568 |
| Bsp143I | GATC | 3 cut(s) | 61, 174, 592 |
| BspANI | GGCC | 1 cut(s) | 255 |
| BspLI | GGNNCC | 1 cut(s) | 505 |
| BspMAI | CTGCAG | 1 cut(s) | 172 |
| BspMI | ACCTGC | 1 cut(s) | 149 |
| BspPI | GGATC | 2 cut(s) | 56, 600 |
| BsrDI | GCAATG | 1 cut(s) | 450 |
| BsrI | ACTGG | 1 cut(s) | 507 |
| BssMI | GATC | 3 cut(s) | 61, 174, 592 |
| BssSI | CACGAG | 1 cut(s) | 32 |
| Bst2BI | CACGAG | 1 cut(s) | 32 |
| Bst4CI | ACNGT | 2 cut(s) | 223, 301 |
| BstC8I | GCNNGC | 5 cut(s) | 82, 168, 196, 437, 441 |
| BstF5I | GGATG | 1 cut(s) | 144 |
| BstKTI | GATC | 3 cut(s) | 64, 177, 595 |
| BstMBI | GATC | 3 cut(s) | 61, 174, 592 |
| BstMCI | CGRYCG | 1 cut(s) | 256 |
| BstNSI | RCATGY | 2 cut(s) | 166, 198 |
| BstSFI | CTRYAG | 1 cut(s) | 168 |
| BstV1I | GCAGC | 2 cut(s) | 203, 358 |
| BstV2I | GAAGAC | 2 cut(s) | 432, 528 |
| BstZI | CGGCCG | 1 cut(s) | 253 |
| BsuRI | GGCC | 1 cut(s) | 255 |
| BtsCI | GGATG | 1 cut(s) | 144 |
| BtsI | GCAGTG | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 1 cut(s) | 177 |
| BveI | ACCTGC | 1 cut(s) | 149 |
| Cac8I | GCNNGC | 5 cut(s) | 82, 168, 196, 437, 441 |
| Cfr13I | GGNCC | 2 cut(s) | 504, 612 |
| Csp6I | GTAC | 2 cut(s) | 315, 554 |
| CviAII | CATG | 5 cut(s) | 163, 195, 308, 418, 422 |
| CviJI | RGCY | 5 cut(s) | 84, 127, 255, 454, 566 |
| CviKI_1 | RGCY | 5 cut(s) | 84, 127, 255, 454, 566 |
| CviQI | GTAC | 2 cut(s) | 315, 554 |
| DpnI | GATC | 3 cut(s) | 63, 176, 594 |
| DpnII | GATC | 3 cut(s) | 61, 174, 592 |
| DraIII | CACNNNGTG | 1 cut(s) | 286 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 606 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 606 |
| EaeI | YGGCCR | 1 cut(s) | 253 |
| EagI | CGGCCG | 1 cut(s) | 253 |
| Ecl136II | GAGCTC | 2 cut(s) | 127, 566 |
| EclXI | CGGCCG | 1 cut(s) | 253 |
| Eco24I | GRGCYC | 2 cut(s) | 129, 568 |
| Eco47I | GGWCC | 2 cut(s) | 504, 612 |
| Eco52I | CGGCCG | 1 cut(s) | 253 |
| Eco53kI | GAGCTC | 2 cut(s) | 127, 566 |
| Eco57I | CTGAAG | 1 cut(s) | 532 |
| EcoICRI | GAGCTC | 2 cut(s) | 127, 566 |
| EcoT22I | ATGCAT | 2 cut(s) | 108, 423 |
| EcoT38I | GRGCYC | 2 cut(s) | 129, 568 |
| FaeI | CATG | 5 cut(s) | 166, 198, 311, 421, 425 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 553, 585 |
| FaqI | GGGAC | 2 cut(s) | 110, 612 |
| FatI | CATG | 5 cut(s) | 162, 194, 307, 417, 421 |
| FauNDI | CATATG | 1 cut(s) | 431 |
| FbaI | TGATCA | 1 cut(s) | 174 |
| Fnu4HI | GCNGC | 2 cut(s) | 192, 372 |
| FokI | GGATG | 1 cut(s) | 131 |
| FriOI | GRGCYC | 2 cut(s) | 129, 568 |
| Fsp4HI | GCNGC | 2 cut(s) | 192, 372 |
| FspBI | CTAG | 1 cut(s) | 9 |
| GluI | GCNGC | 2 cut(s) | 192, 372 |
| HaeIII | GGCC | 1 cut(s) | 255 |
| Hin1II | CATG | 5 cut(s) | 166, 198, 311, 421, 425 |
| HinfI | GANTC | 3 cut(s) | 262, 515, 582 |
| Hpy188I | TCNGA | 1 cut(s) | 520 |
| Hpy188III | TCNNGA | 3 cut(s) | 69, 485, 615 |
| HpyAV | CCTTC | 2 cut(s) | 75, 87 |
| HpyCH4III | ACNGT | 2 cut(s) | 223, 301 |
| HpyCH4V | TGCA | 9 cut(s) | 106, 122, 144, 170, 191, 289, 421, 435, 443 |
| Hsp92II | CATG | 5 cut(s) | 166, 198, 311, 421, 425 |
| Ksp22I | TGATCA | 1 cut(s) | 174 |
| Kzo9I | GATC | 3 cut(s) | 61, 174, 592 |
| LmnI | GCTCC | 1 cut(s) | 571 |
| LpnPI | CCDG | 5 cut(s) | 66, 154, 180, 275, 520 |
| Lsp1109I | GCAGC | 2 cut(s) | 203, 358 |
| LweI | GCATC | 2 cut(s) | 153, 178 |
| MaeI | CTAG | 1 cut(s) | 9 |
| MaeIII | GTNAC | 2 cut(s) | 19, 259 |
| MalI | GATC | 3 cut(s) | 63, 176, 594 |
| MboI | GATC | 3 cut(s) | 61, 174, 592 |
| MboII | GAAGA | 2 cut(s) | 437, 533 |
| MhlI | GDGCHC | 2 cut(s) | 129, 568 |
| MluCI | AATT | 3 cut(s) | 132, 245, 413 |
| MlyI | GAGTC | 2 cut(s) | 256, 524 |
| MmeI | TCCRAC | 2 cut(s) | 498, 559 |
| MnlI | CCTC | 2 cut(s) | 65, 482 |
| Mph1103I | ATGCAT | 2 cut(s) | 108, 423 |
| MseI | TTAA | 3 cut(s) | 248, 383, 498 |
| NdeI | CATATG | 1 cut(s) | 431 |
| NdeII | GATC | 3 cut(s) | 61, 174, 592 |
| NlaIII | CATG | 5 cut(s) | 166, 198, 311, 421, 425 |
| NlaIV | GGNNCC | 1 cut(s) | 505 |
| NmeAIII | GCCGAG | 1 cut(s) | 281 |
| NmuCI | GTSAC | 2 cut(s) | 19, 259 |
| NsiI | ATGCAT | 2 cut(s) | 108, 423 |
| NspI | RCATGY | 2 cut(s) | 166, 198 |
| PaeI | GCATGC | 1 cut(s) | 198 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 84 |
| PfeI | GAWTC | 1 cut(s) | 582 |
| PkrI | GCNGC | 2 cut(s) | 193, 373 |
| PleI | GAGTC | 2 cut(s) | 256, 523 |
| PpsI | GAGTC | 2 cut(s) | 256, 523 |
| PshBI | ATTAAT | 2 cut(s) | 248, 498 |
| Psp124BI | GAGCTC | 2 cut(s) | 129, 568 |
| PspN4I | GGNNCC | 1 cut(s) | 505 |
| PspPI | GGNCC | 2 cut(s) | 504, 612 |
| PstI | CTGCAG | 1 cut(s) | 172 |
| RsaI | GTAC | 2 cut(s) | 316, 555 |
| RsaNI | GTAC | 2 cut(s) | 315, 554 |
| SacI | GAGCTC | 2 cut(s) | 129, 568 |
| SaqAI | TTAA | 3 cut(s) | 248, 383, 498 |
| SatI | GCNGC | 2 cut(s) | 192, 372 |
| Sau3AI | GATC | 3 cut(s) | 61, 174, 592 |
| Sau96I | GGNCC | 2 cut(s) | 504, 612 |
| SchI | GAGTC | 2 cut(s) | 256, 524 |
| SduI | GDGCHC | 2 cut(s) | 129, 568 |
| SetI | ASST | 7 cut(s) | 57, 129, 143, 155, 456, 568, 610 |
| SfaNI | GCATC | 2 cut(s) | 153, 178 |
| SfcI | CTRYAG | 1 cut(s) | 168 |
| SinI | GGWCC | 2 cut(s) | 504, 612 |
| SphI | GCATGC | 1 cut(s) | 198 |
| Sse9I | AATT | 3 cut(s) | 132, 245, 413 |
| SspMI | CTAG | 1 cut(s) | 9 |
| SstI | GAGCTC | 2 cut(s) | 129, 568 |
| TaaI | ACNGT | 2 cut(s) | 223, 301 |
| TaqI | TCGA | 4 cut(s) | 243, 484, 494, 558 |
| TaqII | GACCGA | 1 cut(s) | 600 |
| TasI | AATT | 3 cut(s) | 132, 245, 413 |
| TatI | WGTACW | 1 cut(s) | 314 |
| TfiI | GAWTC | 1 cut(s) | 582 |
| Tru1I | TTAA | 3 cut(s) | 248, 383, 498 |
| Tru9I | TTAA | 3 cut(s) | 248, 383, 498 |
| TscAI | CASTG | 1 cut(s) | 177 |
| TseFI | GTSAC | 2 cut(s) | 19, 259 |
| TseI | GCWGC | 2 cut(s) | 191, 371 |
| Tsp45I | GTSAC | 2 cut(s) | 19, 259 |
| TspDTI | ATGAA | 3 cut(s) | 406, 438, 470 |
| TspGWI | ACGGA | 2 cut(s) | 550, 565 |
| TspRI | CASTG | 1 cut(s) | 177 |
| VpaK11BI | GGWCC | 2 cut(s) | 504, 612 |
| VspI | ATTAAT | 2 cut(s) | 248, 498 |
| XapI | RAATTY | 2 cut(s) | 132, 413 |
| XceI | RCATGY | 2 cut(s) | 166, 198 |
| XspI | CTAG | 1 cut(s) | 9 |
| Zsp2I | ATGCAT | 2 cut(s) | 108, 423 |