TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 196 | 1.8e-47 | TIR domain |
| TIR_2 | PF13676 | 20 - 124 | 2.4e-11 | TIR domain |
| NB-ARC | PF00931 | 201 - 360 | 8.7e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 501 | 7.8e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 700 - 842 | 6.5e-13 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 710 - 795 | 1.1e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 844 - 959 | 1.4e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 852 - 938 | 7.7e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 947 - 1114 | 8.2e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 974 - 1061 | 1.5e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| NB-ARC | PF00931 | 1108 - 1273 | 2e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 1336 - 1405 | 2.8e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 1601 - 1694 | 5.6e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 1602 - 1698 | 1.1e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 753, 977, 4316 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1240 |
| AccI | GTMKAC | 3 cut(s) | 3925, 4347, 4539 |
| AccII | CGCG | 1 cut(s) | 209 |
| AccIII | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| AciI | CCGC | 7 cut(s) | 433, 484, 1882, 2629, 2678, 2883, 4240 |
| AclWI | GGATC | 5 cut(s) | 335, 1674, 3228, 3324, 3716 |
| AcoI | YGGCCR | 2 cut(s) | 103, 2199 |
| AcsI | RAATTY | 7 cut(s) | 1007, 1356, 2174, 2979, 4074, 4398, 5197 |
| AcuI | CTGAAG | 8 cut(s) | 177, 1060, 1937, 2582, 3781, 3796, 4616, 5167 |
| AcyI | GRCGYC | 1 cut(s) | 1967 |
| AdeI | CACNNNGTG | 1 cut(s) | 3857 |
| AfaI | GTAC | 7 cut(s) | 1194, 1257, 1302, 1598, 3231, 4601, 4699 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 426, 1240, 3833, 3834 |
| AflIII | ACRYGT | 2 cut(s) | 207, 4432 |
| AjnI | CCWGG | 5 cut(s) | 407, 1239, 4231, 4260, 4290 |
| AleI | CACNNNNGTG | 1 cut(s) | 4086 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1757, 1789, 3569, 3601 |
| Alw21I | GWGCWC | 3 cut(s) | 402, 1417, 5054 |
| AlwI | GGATC | 5 cut(s) | 335, 1674, 3228, 3324, 3716 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1240, 2121, 5010 |
| Ama87I | CYCGRG | 1 cut(s) | 182 |
| Aor13HI | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| AoxI | GGCC | 8 cut(s) | 103, 994, 1372, 1476, 1983, 2199, 3994, 4090 |
| ApeKI | GCWGC | 9 cut(s) | 5, 8, 11, 835, 2115, 2157, 2754, 2907, 4836 |
| ApoI | RAATTY | 7 cut(s) | 1007, 1356, 2174, 2979, 4074, 4398, 5197 |
| AseI | ATTAAT | 2 cut(s) | 2426, 4022 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 592, 804, 2463, 3528 |
| AspS9I | GGNCC | 2 cut(s) | 414, 994 |
| AsuC2I | CCSGG | 2 cut(s) | 1026, 2368 |
| AsuHPI | GGTGA | 5 cut(s) | 728, 794, 2030, 3273, 3854 |
| AsuII | TTCGAA | 2 cut(s) | 1272, 2957 |
| AvaI | CYCGRG | 1 cut(s) | 182 |
| AvaII | GGWCC | 1 cut(s) | 414 |
| BalI | TGGCCA | 1 cut(s) | 105 |
| BanII | GRGCYC | 1 cut(s) | 1417 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1913, 1945 |
| BauI | CACGAG | 2 cut(s) | 1784, 4981 |
| BbsI | GAAGAC | 4 cut(s) | 52, 692, 2528, 2738 |
| Bbv12I | GWGCWC | 3 cut(s) | 402, 1417, 5054 |
| BbvI | GCAGC | 6 cut(s) | 847, 2127, 2144, 2766, 2894, 4823 |
| BceAI | ACGGC | 7 cut(s) | 487, 2228, 3074, 3869, 4426, 4677, 4958 |
| BciT130I | CCWGG | 5 cut(s) | 409, 1241, 4233, 4262, 4292 |
| BciVI | GTATCC | 1 cut(s) | 1427 |
| BclI | TGATCA | 3 cut(s) | 733, 916, 3355 |
| BcnI | CCSGG | 2 cut(s) | 1026, 2368 |
| BfmI | CTRYAG | 7 cut(s) | 1289, 3094, 3423, 4102, 4184, 4946, 5011 |
| BfuI | GTATCC | 1 cut(s) | 1427 |
| BglII | AGATCT | 4 cut(s) | 93, 2613, 3886, 4130 |
| BmcAI | AGTACT | 2 cut(s) | 1302, 4601 |
| Bme1390I | CCNGG | 7 cut(s) | 409, 1026, 1241, 2368, 4233, 4262, 4292 |
| Bme18I | GGWCC | 1 cut(s) | 414 |
| BmeT110I | CYCGRG | 1 cut(s) | 182 |
| BmgT120I | GGNCC | 2 cut(s) | 414, 994 |
| BmrFI | CCNGG | 7 cut(s) | 409, 1026, 1241, 2368, 4233, 4262, 4292 |
| BmsI | GCATC | 8 cut(s) | 916, 1802, 1861, 1893, 3277, 3931, 4726, 5016 |
| BpiI | GAAGAC | 4 cut(s) | 52, 692, 2528, 2738 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1161, 1193, 1933, 1965 |
| BpmI | CTGGAG | 1 cut(s) | 1382 |
| Bpu14I | TTCGAA | 2 cut(s) | 1272, 2957 |
| BpuMI | CCSGG | 2 cut(s) | 1026, 2368 |
| BsaAI | YACGTR | 1 cut(s) | 1196 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1041 |
| BsaHI | GRCGYC | 1 cut(s) | 1967 |
| BsaI | GGTCTC | 1 cut(s) | 3155 |
| BsaJI | CCNNGG | 7 cut(s) | 408, 1240, 1479, 2210, 3213, 4232, 4261 |
| BsaWI | WCCGGW | 3 cut(s) | 2608, 2974, 4858 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1757, 1787, 3569, 3599 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 426, 1240, 3833, 3834 |
| Bse118I | RCCGGY | 1 cut(s) | 458 |
| Bse1I | ACTGG | 3 cut(s) | 273, 1397, 1435 |
| Bse3DI | GCAATG | 4 cut(s) | 693, 739, 3417, 4353 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1041 |
| BseAI | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| BseBI | CCWGG | 5 cut(s) | 409, 1241, 4233, 4262, 4292 |
| BseDI | CCNNGG | 7 cut(s) | 408, 1240, 1479, 2210, 3213, 4232, 4261 |
| BseJI | GATNNNNATC | 1 cut(s) | 1041 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 426, 1240, 3833, 3834 |
| BseMI | GCAATG | 4 cut(s) | 693, 739, 3417, 4353 |
| BseNI | ACTGG | 3 cut(s) | 273, 1397, 1435 |
| BseRI | GAGGAG | 2 cut(s) | 1553, 3438 |
| BseXI | GCAGC | 6 cut(s) | 847, 2127, 2144, 2766, 2894, 4823 |
| BseYI | CCCAGC | 2 cut(s) | 474, 3765 |
| BsgI | GTGCAG | 5 cut(s) | 3528, 3578, 4064, 4822, 4963 |
| Bsh1236I | CGCG | 1 cut(s) | 209 |
| BshFI | GGCC | 8 cut(s) | 105, 996, 1374, 1478, 1985, 2201, 3996, 4092 |
| BsiHKAI | GWGCWC | 3 cut(s) | 402, 1417, 5054 |
| BsiHKCI | CYCGRG | 1 cut(s) | 182 |
| BsiSI | CCGG | 7 cut(s) | 344, 459, 1025, 2367, 2609, 2975, 4859 |
| BslFI | GGGAC | 6 cut(s) | 188, 427, 2911, 3747, 4169, 4174 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 426, 1240, 3833, 3834 |
| BsmBI | CGTCTC | 1 cut(s) | 1958 |
| BsmFI | GGGAC | 6 cut(s) | 188, 427, 2911, 3747, 4169, 4174 |
| BsmI | GAATGC | 4 cut(s) | 39, 296, 798, 2547 |
| BsnI | GGCC | 8 cut(s) | 105, 996, 1374, 1478, 1985, 2201, 3996, 4092 |
| Bso31I | GGTCTC | 1 cut(s) | 3155 |
| BsoBI | CYCGRG | 1 cut(s) | 182 |
| Bsp119I | TTCGAA | 2 cut(s) | 1272, 2957 |
| Bsp1286I | GDGCHC | 3 cut(s) | 402, 1417, 5054 |
| Bsp13I | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| Bsp1407I | TGTACA | 1 cut(s) | 4697 |
| BspACI | CCGC | 7 cut(s) | 433, 484, 1882, 2629, 2678, 2883, 4240 |
| BspANI | GGCC | 8 cut(s) | 105, 996, 1374, 1478, 1985, 2201, 3996, 4092 |
| BspEI | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| BspFNI | CGCG | 1 cut(s) | 209 |
| BspHI | TCATGA | 1 cut(s) | 4462 |
| BspMAI | CTGCAG | 1 cut(s) | 3098 |
| BspPI | GGATC | 5 cut(s) | 335, 1674, 3228, 3324, 3716 |
| BspQI | GCTCTTC | 1 cut(s) | 153 |
| BspT104I | TTCGAA | 2 cut(s) | 1272, 2957 |
| BspTNI | GGTCTC | 1 cut(s) | 3155 |
| BsrDI | GCAATG | 4 cut(s) | 693, 739, 3417, 4353 |
| BsrFI | RCCGGY | 1 cut(s) | 458 |
| BsrGI | TGTACA | 1 cut(s) | 4697 |
| BsrI | ACTGG | 3 cut(s) | 273, 1397, 1435 |
| BssAI | RCCGGY | 1 cut(s) | 458 |
| BssECI | CCNNGG | 7 cut(s) | 408, 1240, 1479, 2210, 3213, 4232, 4261 |
| BssNAI | GTATAC | 2 cut(s) | 3926, 4348 |
| BssNI | GRCGYC | 1 cut(s) | 1967 |
| BssSI | CACGAG | 2 cut(s) | 1784, 4981 |
| BssT1I | CCWWGG | 2 cut(s) | 1479, 3213 |
| Bst1107I | GTATAC | 2 cut(s) | 3926, 4348 |
| Bst2BI | CACGAG | 2 cut(s) | 1784, 4981 |
| Bst2UI | CCWGG | 5 cut(s) | 409, 1241, 4233, 4262, 4292 |
| Bst4CI | ACNGT | 8 cut(s) | 543, 911, 1300, 1745, 2791, 3964, 4085, 4424 |
| Bst6I | CTCTTC | 6 cut(s) | 153, 2454, 3800, 5001, 5211, 5229 |
| BstACI | GRCGYC | 1 cut(s) | 1967 |
| BstAUI | TGTACA | 1 cut(s) | 4697 |
| BstBAI | YACGTR | 1 cut(s) | 1196 |
| BstBI | TTCGAA | 2 cut(s) | 1272, 2957 |
| BstC8I | GCNNGC | 5 cut(s) | 460, 1122, 1235, 2702, 3858 |
| BstDSI | CCRYGG | 1 cut(s) | 2210 |
| BstEII | GGTNACC | 1 cut(s) | 4256 |
| BstFNI | CGCG | 1 cut(s) | 209 |
| BstNI | CCWGG | 5 cut(s) | 409, 1241, 4233, 4262, 4292 |
| BstNSI | RCATGY | 6 cut(s) | 1124, 1320, 1873, 3872, 4436, 4552 |
| BstPI | GGTNACC | 1 cut(s) | 4256 |
| BstSCI | CCNGG | 7 cut(s) | 407, 1024, 1239, 2366, 4231, 4260, 4290 |
| BstSFI | CTRYAG | 7 cut(s) | 1289, 3094, 3423, 4102, 4184, 4946, 5011 |
| BstUI | CGCG | 1 cut(s) | 209 |
| BstV1I | GCAGC | 6 cut(s) | 847, 2127, 2144, 2766, 2894, 4823 |
| BstV2I | GAAGAC | 4 cut(s) | 52, 692, 2528, 2738 |
| BstX2I | RGATCY | 6 cut(s) | 93, 340, 2613, 3220, 3886, 4130 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3196, 4728 |
| BstYI | RGATCY | 6 cut(s) | 93, 340, 2613, 3220, 3886, 4130 |
| BstZ17I | GTATAC | 2 cut(s) | 3926, 4348 |
| BsuI | GTATCC | 1 cut(s) | 1427 |
| BsuRI | GGCC | 8 cut(s) | 105, 996, 1374, 1478, 1985, 2201, 3996, 4092 |
| BtgI | CCRYGG | 1 cut(s) | 2210 |
| BtsIMutI | CAGTG | 2 cut(s) | 1428, 5116 |
| Cac8I | GCNNGC | 5 cut(s) | 460, 1122, 1235, 2702, 3858 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1240, 2121, 5010 |
| CciI | TCATGA | 1 cut(s) | 4462 |
| Cfr10I | RCCGGY | 1 cut(s) | 458 |
| Cfr13I | GGNCC | 2 cut(s) | 414, 994 |
| CseI | GACGC | 3 cut(s) | 198, 215, 1975 |
| CsiI | ACCWGGT | 1 cut(s) | 4290 |
| Csp6I | GTAC | 7 cut(s) | 1193, 1256, 1301, 1597, 3230, 4600, 4698 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1975, 2010, 2382, 2417 |
| CviQI | GTAC | 7 cut(s) | 1193, 1256, 1301, 1597, 3230, 4600, 4698 |
| DraI | TTTAAA | 3 cut(s) | 537, 1327, 3751 |
| DraIII | CACNNNGTG | 1 cut(s) | 3857 |
| EaeI | YGGCCR | 2 cut(s) | 103, 2199 |
| Eam1104I | CTCTTC | 6 cut(s) | 153, 2454, 3800, 5001, 5211, 5229 |
| EarI | CTCTTC | 6 cut(s) | 153, 2454, 3800, 5001, 5211, 5229 |
| Ecl136II | GAGCTC | 1 cut(s) | 1415 |
| Eco130I | CCWWGG | 2 cut(s) | 1479, 3213 |
| Eco24I | GRGCYC | 1 cut(s) | 1417 |
| Eco31I | GGTCTC | 1 cut(s) | 3155 |
| Eco47I | GGWCC | 1 cut(s) | 414 |
| Eco53kI | GAGCTC | 1 cut(s) | 1415 |
| Eco57I | CTGAAG | 8 cut(s) | 177, 1060, 1937, 2582, 3781, 3796, 4616, 5167 |
| Eco88I | CYCGRG | 1 cut(s) | 182 |
| Eco91I | GGTNACC | 1 cut(s) | 4256 |
| EcoICRI | GAGCTC | 1 cut(s) | 1415 |
| EcoO109I | RGGNCCY | 2 cut(s) | 414, 994 |
| EcoO65I | GGTNACC | 1 cut(s) | 4256 |
| EcoRI | GAATTC | 1 cut(s) | 5197 |
| EcoRII | CCWGG | 5 cut(s) | 407, 1239, 4231, 4260, 4290 |
| EcoT14I | CCWWGG | 2 cut(s) | 1479, 3213 |
| EcoT22I | ATGCAT | 3 cut(s) | 296, 1458, 4176 |
| EcoT38I | GRGCYC | 1 cut(s) | 1417 |
| ErhI | CCWWGG | 2 cut(s) | 1479, 3213 |
| Esp3I | CGTCTC | 1 cut(s) | 1958 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1058, 1090, 1992, 2024 |
| FaqI | GGGAC | 6 cut(s) | 188, 427, 2911, 3747, 4169, 4174 |
| FauI | CCCGC | 1 cut(s) | 491 |
| FauNDI | CATATG | 3 cut(s) | 2439, 2553, 4803 |
| FbaI | TGATCA | 3 cut(s) | 733, 916, 3355 |
| FblI | GTMKAC | 3 cut(s) | 3925, 4347, 4539 |
| FriOI | GRGCYC | 1 cut(s) | 1417 |
| GsaI | CCCAGC | 2 cut(s) | 478, 3769 |
| GsuI | CTGGAG | 1 cut(s) | 1382 |
| HaeIII | GGCC | 8 cut(s) | 105, 996, 1374, 1478, 1985, 2201, 3996, 4092 |
| HapII | CCGG | 7 cut(s) | 344, 459, 1025, 2367, 2609, 2975, 4859 |
| HgaI | GACGC | 3 cut(s) | 198, 215, 1975 |
| Hin1I | GRCGYC | 1 cut(s) | 1967 |
| HincII | GTYRAC | 8 cut(s) | 1449, 1518, 1548, 1861, 2336, 2918, 4281, 4540 |
| HindII | GTYRAC | 8 cut(s) | 1449, 1518, 1548, 1861, 2336, 2918, 4281, 4540 |
| HindIII | AAGCTT | 6 cut(s) | 215, 506, 1629, 1910, 2023, 4589 |
| HpaI | GTTAAC | 1 cut(s) | 1548 |
| HpaII | CCGG | 7 cut(s) | 344, 459, 1025, 2367, 2609, 2975, 4859 |
| HphI | GGTGA | 5 cut(s) | 728, 794, 2030, 3273, 3854 |
| Hpy99I | CGWCG | 1 cut(s) | 1497 |
| HpyCH4III | ACNGT | 8 cut(s) | 543, 911, 1300, 1745, 2791, 3964, 4085, 4424 |
| HpyCH4IV | ACGT | 5 cut(s) | 177, 756, 1195, 2450, 3026 |
| HpySE526I | ACGT | 5 cut(s) | 177, 756, 1195, 2450, 3026 |
| Hsp92I | GRCGYC | 1 cut(s) | 1967 |
| KflI | GGGWCCC | 1 cut(s) | 414 |
| Kpn2I | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| KroI | GCCGGC | 1 cut(s) | 458 |
| KroNI | GCCGGC | 1 cut(s) | 460 |
| Ksp22I | TGATCA | 3 cut(s) | 733, 916, 3355 |
| KspAI | GTTAAC | 1 cut(s) | 1548 |
| LguI | GCTCTTC | 1 cut(s) | 153 |
| LmnI | GCTCC | 8 cut(s) | 1169, 3451, 3590, 3902, 4398, 4418, 4669, 4882 |
| Lsp1109I | GCAGC | 6 cut(s) | 847, 2127, 2144, 2766, 2894, 4823 |
| LweI | GCATC | 8 cut(s) | 916, 1802, 1861, 1893, 3277, 3931, 4726, 5016 |
| MabI | ACCWGGT | 1 cut(s) | 4290 |
| MaeII | ACGT | 5 cut(s) | 177, 756, 1195, 2450, 3026 |
| MfeI | CAATTG | 4 cut(s) | 2664, 3051, 3298, 4935 |
| MflI | RGATCY | 6 cut(s) | 93, 340, 2613, 3220, 3886, 4130 |
| MhlI | GDGCHC | 3 cut(s) | 402, 1417, 5054 |
| MlsI | TGGCCA | 1 cut(s) | 105 |
| MluI | ACGCGT | 1 cut(s) | 207 |
| MluNI | TGGCCA | 1 cut(s) | 105 |
| MlyI | GAGTC | 8 cut(s) | 1951, 2086, 2323, 2515, 2542, 2752, 2905, 5216 |
| MmeI | TCCRAC | 5 cut(s) | 565, 637, 3361, 4814, 5088 |
| Mox20I | TGGCCA | 1 cut(s) | 105 |
| Mph1103I | ATGCAT | 3 cut(s) | 296, 1458, 4176 |
| MroI | TCCGGA | 3 cut(s) | 2608, 2974, 4858 |
| MroNI | GCCGGC | 1 cut(s) | 458 |
| MroXI | GAANNNNTTC | 4 cut(s) | 592, 804, 2463, 3528 |
| MscI | TGGCCA | 1 cut(s) | 105 |
| MslI | CAYNNNNRTG | 8 cut(s) | 2442, 2552, 2652, 3018, 3990, 4086, 4218, 4802 |
| Msp20I | TGGCCA | 1 cut(s) | 105 |
| MspA1I | CMGCKG | 3 cut(s) | 2680, 2704, 3428 |
| MspI | CCGG | 7 cut(s) | 344, 459, 1025, 2367, 2609, 2975, 4859 |
| MspR9I | CCNGG | 7 cut(s) | 409, 1026, 1241, 2368, 4233, 4262, 4292 |
| MunI | CAATTG | 4 cut(s) | 2664, 3051, 3298, 4935 |
| Mva1269I | GAATGC | 4 cut(s) | 39, 296, 798, 2547 |
| MvaI | CCWGG | 5 cut(s) | 409, 1241, 4233, 4262, 4292 |
| MvnI | CGCG | 1 cut(s) | 209 |
| NaeI | GCCGGC | 1 cut(s) | 460 |
| NciI | CCSGG | 2 cut(s) | 1026, 2368 |
| NdeI | CATATG | 3 cut(s) | 2439, 2553, 4803 |
| NgoMIV | GCCGGC | 1 cut(s) | 458 |
| NmeAIII | GCCGAG | 2 cut(s) | 2227, 2928 |
| NmuCI | GTSAC | 6 cut(s) | 1420, 2278, 2343, 3279, 3849, 4622 |
| NsiI | ATGCAT | 3 cut(s) | 296, 1458, 4176 |
| NspI | RCATGY | 6 cut(s) | 1124, 1320, 1873, 3872, 4436, 4552 |
| NspV | TTCGAA | 2 cut(s) | 1272, 2957 |
| OliI | CACNNNNGTG | 1 cut(s) | 4086 |
| PaeI | GCATGC | 1 cut(s) | 1124 |
| PagI | TCATGA | 1 cut(s) | 4462 |
| PciI | ACATGT | 1 cut(s) | 4432 |
| PciSI | GCTCTTC | 1 cut(s) | 153 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 282 |
| PctI | GAATGC | 4 cut(s) | 39, 296, 798, 2547 |
| PdiI | GCCGGC | 1 cut(s) | 460 |
| PdmI | GAANNNNTTC | 4 cut(s) | 592, 804, 2463, 3528 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1240 |
| PleI | GAGTC | 8 cut(s) | 1950, 2085, 2322, 2514, 2541, 2751, 2904, 5215 |
| PpsI | GAGTC | 8 cut(s) | 1950, 2085, 2322, 2514, 2541, 2751, 2904, 5215 |
| Ppu21I | YACGTR | 1 cut(s) | 1196 |
| PpuMI | RGGWCCY | 1 cut(s) | 414 |
| PscI | ACATGT | 1 cut(s) | 4432 |
| PshBI | ATTAAT | 2 cut(s) | 2426, 4022 |
| PsiI | TTATAA | 3 cut(s) | 753, 977, 4316 |
| Psp124BI | GAGCTC | 1 cut(s) | 1417 |
| Psp5II | RGGWCCY | 1 cut(s) | 414 |
| Psp6I | CCWGG | 5 cut(s) | 407, 1239, 4231, 4260, 4290 |
| PspEI | GGTNACC | 1 cut(s) | 4256 |
| PspFI | CCCAGC | 2 cut(s) | 474, 3765 |
| PspGI | CCWGG | 5 cut(s) | 407, 1239, 4231, 4260, 4290 |
| PspPI | GGNCC | 2 cut(s) | 414, 994 |
| PspPPI | RGGWCCY | 1 cut(s) | 414 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1383, 1415 |
| PstI | CTGCAG | 1 cut(s) | 3098 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1240, 2121, 5010 |
| PsuI | RGATCY | 6 cut(s) | 93, 340, 2613, 3220, 3886, 4130 |
| PvuII | CAGCTG | 2 cut(s) | 2704, 3428 |
| RsaI | GTAC | 7 cut(s) | 1194, 1257, 1302, 1598, 3231, 4601, 4699 |
| RsaNI | GTAC | 7 cut(s) | 1193, 1256, 1301, 1597, 3230, 4600, 4698 |
| RseI | CAYNNNNRTG | 8 cut(s) | 2442, 2552, 2652, 3018, 3990, 4086, 4218, 4802 |
| SacI | GAGCTC | 1 cut(s) | 1417 |
| SalI | GTCGAC | 1 cut(s) | 4538 |
| SapI | GCTCTTC | 1 cut(s) | 153 |
| Sau96I | GGNCC | 2 cut(s) | 414, 994 |
| ScaI | AGTACT | 2 cut(s) | 1302, 4601 |
| SchI | GAGTC | 8 cut(s) | 1951, 2086, 2323, 2515, 2542, 2752, 2905, 5216 |
| ScrFI | CCNGG | 7 cut(s) | 409, 1026, 1241, 2368, 4233, 4262, 4292 |
| SduI | GDGCHC | 3 cut(s) | 402, 1417, 5054 |
| SexAI | ACCWGGT | 1 cut(s) | 4290 |
| SfaNI | GCATC | 8 cut(s) | 916, 1802, 1861, 1893, 3277, 3931, 4726, 5016 |
| SfcI | CTRYAG | 7 cut(s) | 1289, 3094, 3423, 4102, 4184, 4946, 5011 |
| SfuI | TTCGAA | 2 cut(s) | 1272, 2957 |
| SinI | GGWCC | 1 cut(s) | 414 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 2442, 2552, 2652, 3018, 3990, 4086, 4218, 4802 |
| SphI | GCATGC | 1 cut(s) | 1124 |
| SsiI | CCGC | 7 cut(s) | 433, 484, 1882, 2629, 2678, 2883, 4240 |
| SspI | AATATT | 1 cut(s) | 532 |
| SstI | GAGCTC | 1 cut(s) | 1417 |
| StyD4I | CCNGG | 7 cut(s) | 407, 1024, 1239, 2366, 4231, 4260, 4290 |
| StyI | CCWWGG | 2 cut(s) | 1479, 3213 |
| TaaI | ACNGT | 8 cut(s) | 543, 911, 1300, 1745, 2791, 3964, 4085, 4424 |
| TaiI | ACGT | 5 cut(s) | 180, 759, 1198, 2453, 3029 |
| TatI | WGTACW | 5 cut(s) | 1255, 1300, 3229, 4599, 4697 |
| TauI | GCSGC | 2 cut(s) | 1884, 2680 |
| TscAI | CASTG | 2 cut(s) | 1435, 5116 |
| TseFI | GTSAC | 6 cut(s) | 1420, 2278, 2343, 3279, 3849, 4622 |
| TseI | GCWGC | 9 cut(s) | 5, 8, 11, 835, 2115, 2157, 2754, 2907, 4836 |
| Tsp45I | GTSAC | 6 cut(s) | 1420, 2278, 2343, 3279, 3849, 4622 |
| TspGWI | ACGGA | 3 cut(s) | 442, 1481, 3965 |
| TspRI | CASTG | 2 cut(s) | 1435, 5116 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1240 |
| VpaK11BI | GGWCC | 1 cut(s) | 414 |
| VspI | ATTAAT | 2 cut(s) | 2426, 4022 |
| XapI | RAATTY | 7 cut(s) | 1007, 1356, 2174, 2979, 4074, 4398, 5197 |
| XbaI | TCTAGA | 1 cut(s) | 1306 |
| XceI | RCATGY | 6 cut(s) | 1124, 1320, 1873, 3872, 4436, 4552 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 577, 856 |
| XmiI | GTMKAC | 3 cut(s) | 3925, 4347, 4539 |
| XmnI | GAANNNNTTC | 4 cut(s) | 592, 804, 2463, 3528 |
| ZrmI | AGTACT | 2 cut(s) | 1302, 4601 |
| Zsp2I | ATGCAT | 3 cut(s) | 296, 1458, 4176 |