TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 184 | 1.6e-49 | TIR domain |
| TIR_2 | PF13676 | 21 - 116 | 3.2e-13 | TIR domain |
| NB-ARC | PF00931 | 202 - 366 | 1.5e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 497 | 4.5e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 658 - 769 | 4.3e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 689 - 775 | 5.6e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 980 |
| Acc36I | ACCTGC | 1 cut(s) | 1512 |
| AccI | GTMKAC | 1 cut(s) | 1726 |
| AccII | CGCG | 2 cut(s) | 1491, 1536 |
| AciI | CCGC | 2 cut(s) | 1489, 2399 |
| AclWI | GGATC | 3 cut(s) | 338, 927, 1970 |
| AcsI | RAATTY | 6 cut(s) | 288, 481, 722, 728, 1254, 2041 |
| AcuI | CTGAAG | 3 cut(s) | 546, 1401, 1897 |
| AfaI | GTAC | 4 cut(s) | 357, 1201, 1856, 1957 |
| AhlI | ACTAGT | 1 cut(s) | 778 |
| AjnI | CCWGG | 3 cut(s) | 1507, 1612, 2047 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 934, 966, 1205, 1237 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1383, 1415 |
| Alw26I | GTCTC | 3 cut(s) | 1381, 2076, 2261 |
| AlwI | GGATC | 3 cut(s) | 338, 927, 1970 |
| ApeKI | GCWGC | 5 cut(s) | 12, 322, 1518, 2052, 2116 |
| ApoI | RAATTY | 6 cut(s) | 288, 481, 722, 728, 1254, 2041 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1625, 1657 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 589, 1310 |
| AspLEI | GCGC | 2 cut(s) | 549, 1518 |
| AspS9I | GGNCC | 2 cut(s) | 371, 1836 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| AsuII | TTCGAA | 1 cut(s) | 2315 |
| AvaII | GGWCC | 2 cut(s) | 371, 1836 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 987, 1019 |
| BauI | CACGAG | 1 cut(s) | 717 |
| BbsI | GAAGAC | 1 cut(s) | 1268 |
| BbvI | GCAGC | 5 cut(s) | 24, 309, 1530, 2064, 2103 |
| BccI | CCATC | 4 cut(s) | 172, 1277, 1777, 1987 |
| BciT130I | CCWGG | 3 cut(s) | 1509, 1614, 2049 |
| BcoDI | GTCTC | 3 cut(s) | 1381, 2076, 2261 |
| BcuI | ACTAGT | 1 cut(s) | 778 |
| BfaI | CTAG | 8 cut(s) | 578, 693, 779, 989, 1232, 1796, 1994, 2036 |
| BfmI | CTRYAG | 1 cut(s) | 2136 |
| BfuAI | ACCTGC | 1 cut(s) | 1512 |
| BisI | GCNGC | 5 cut(s) | 13, 323, 1519, 2053, 2117 |
| BlpI | GCTNAGC | 1 cut(s) | 1608 |
| BlsI | GCNGC | 5 cut(s) | 14, 324, 1520, 2054, 2118 |
| Bme1390I | CCNGG | 3 cut(s) | 1509, 1614, 2049 |
| Bme18I | GGWCC | 2 cut(s) | 371, 1836 |
| BmgT120I | GGNCC | 2 cut(s) | 371, 1836 |
| BmiI | GGNNCC | 1 cut(s) | 850 |
| BmrFI | CCNGG | 3 cut(s) | 1509, 1614, 2049 |
| BmsI | GCATC | 6 cut(s) | 436, 1048, 1444, 1531, 1720, 2441 |
| BpiI | GAAGAC | 1 cut(s) | 1268 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 700, 732 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1608 |
| Bpu14I | TTCGAA | 1 cut(s) | 2315 |
| BpuEI | CTTGAG | 8 cut(s) | 992, 1576, 1658, 1684, 1727, 1952, 2251, 2342 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1545 |
| BsaJI | CCNNGG | 2 cut(s) | 300, 2446 |
| BsaWI | WCCGGW | 1 cut(s) | 1838 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 7, 37, 2174, 2204 |
| Bse1I | ACTGG | 4 cut(s) | 373, 1272, 1750, 1773 |
| Bse3DI | GCAATG | 1 cut(s) | 1320 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1545 |
| BseBI | CCWGG | 3 cut(s) | 1509, 1614, 2049 |
| BseDI | CCNNGG | 2 cut(s) | 300, 2446 |
| BseJI | GATNNNNATC | 1 cut(s) | 1545 |
| BseMI | GCAATG | 1 cut(s) | 1320 |
| BseMII | CTCAG | 4 cut(s) | 82, 1599, 1891, 1912 |
| BseNI | ACTGG | 4 cut(s) | 373, 1272, 1750, 1773 |
| BseXI | GCAGC | 5 cut(s) | 24, 309, 1530, 2064, 2103 |
| BseYI | CCCAGC | 1 cut(s) | 1603 |
| BsgI | GTGCAG | 2 cut(s) | 573, 1583 |
| Bsh1236I | CGCG | 2 cut(s) | 1491, 1536 |
| BsiSI | CCGG | 3 cut(s) | 1839, 2274, 2333 |
| BslFI | GGGAC | 1 cut(s) | 1056 |
| BsmAI | GTCTC | 3 cut(s) | 1381, 2076, 2261 |
| BsmFI | GGGAC | 1 cut(s) | 1056 |
| BsmI | GAATGC | 2 cut(s) | 1639, 2208 |
| Bsp119I | TTCGAA | 1 cut(s) | 2315 |
| Bsp1407I | TGTACA | 2 cut(s) | 1854, 1955 |
| Bsp143I | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1608 |
| BspACI | CCGC | 2 cut(s) | 1489, 2399 |
| BspCNI | CTCAG | 4 cut(s) | 81, 1600, 1890, 1911 |
| BspFNI | CGCG | 2 cut(s) | 1491, 1536 |
| BspLI | GGNNCC | 1 cut(s) | 850 |
| BspMI | ACCTGC | 1 cut(s) | 1512 |
| BspPI | GGATC | 3 cut(s) | 338, 927, 1970 |
| BspQI | GCTCTTC | 1 cut(s) | 1068 |
| BspT104I | TTCGAA | 1 cut(s) | 2315 |
| BsrDI | GCAATG | 1 cut(s) | 1320 |
| BsrGI | TGTACA | 2 cut(s) | 1854, 1955 |
| BsrI | ACTGG | 4 cut(s) | 373, 1272, 1750, 1773 |
| BssECI | CCNNGG | 2 cut(s) | 300, 2446 |
| BssMI | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| BssNAI | GTATAC | 1 cut(s) | 1727 |
| BssSI | CACGAG | 1 cut(s) | 717 |
| BssT1I | CCWWGG | 1 cut(s) | 2446 |
| Bst1107I | GTATAC | 1 cut(s) | 1727 |
| Bst2BI | CACGAG | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 3 cut(s) | 1509, 1614, 2049 |
| Bst4CI | ACNGT | 3 cut(s) | 1724, 1962, 2190 |
| Bst6I | CTCTTC | 5 cut(s) | 1068, 1208, 1770, 2118, 2331 |
| BstAUI | TGTACA | 2 cut(s) | 1854, 1955 |
| BstBI | TTCGAA | 1 cut(s) | 2315 |
| BstC8I | GCNNGC | 3 cut(s) | 1514, 1629, 1904 |
| BstDEI | CTNAG | 6 cut(s) | 68, 619, 1608, 1802, 1877, 1898 |
| BstDSI | CCRYGG | 1 cut(s) | 300 |
| BstFNI | CGCG | 2 cut(s) | 1491, 1536 |
| BstHHI | GCGC | 2 cut(s) | 549, 1518 |
| BstKTI | GATC | 5 cut(s) | 346, 922, 1354, 1415, 1978 |
| BstMAI | GTCTC | 3 cut(s) | 1381, 2076, 2261 |
| BstMBI | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 12, 314, 1518, 2061, 2113 |
| BstNI | CCWGG | 3 cut(s) | 1509, 1614, 2049 |
| BstNSI | RCATGY | 4 cut(s) | 1329, 1450, 1631, 1906 |
| BstSCI | CCNGG | 3 cut(s) | 1507, 1612, 2047 |
| BstSFI | CTRYAG | 1 cut(s) | 2136 |
| BstUI | CGCG | 2 cut(s) | 1491, 1536 |
| BstV1I | GCAGC | 5 cut(s) | 24, 309, 1530, 2064, 2103 |
| BstV2I | GAAGAC | 1 cut(s) | 1268 |
| BstZ17I | GTATAC | 1 cut(s) | 1727 |
| BtgI | CCRYGG | 1 cut(s) | 300 |
| BtsI | GCAGTG | 3 cut(s) | 117, 324, 2169 |
| BtsIMutI | CAGTG | 4 cut(s) | 117, 324, 1265, 2169 |
| BveI | ACCTGC | 1 cut(s) | 1512 |
| Cac8I | GCNNGC | 3 cut(s) | 1514, 1629, 1904 |
| CfoI | GCGC | 2 cut(s) | 549, 1518 |
| Cfr13I | GGNCC | 2 cut(s) | 371, 1836 |
| CpoI | CGGWCCG | 1 cut(s) | 1836 |
| CseI | GACGC | 1 cut(s) | 1799 |
| Csp6I | GTAC | 4 cut(s) | 356, 1200, 1855, 1956 |
| CspI | CGGWCCG | 1 cut(s) | 1836 |
| CviQI | GTAC | 4 cut(s) | 356, 1200, 1855, 1956 |
| DdeI | CTNAG | 6 cut(s) | 68, 619, 1608, 1802, 1877, 1898 |
| DpnI | GATC | 5 cut(s) | 345, 921, 1353, 1414, 1977 |
| DpnII | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| DraI | TTTAAA | 1 cut(s) | 1737 |
| Eam1104I | CTCTTC | 5 cut(s) | 1068, 1208, 1770, 2118, 2331 |
| EarI | CTCTTC | 5 cut(s) | 1068, 1208, 1770, 2118, 2331 |
| Eco130I | CCWWGG | 1 cut(s) | 2446 |
| Eco32I | GATATC | 1 cut(s) | 1751 |
| Eco47I | GGWCC | 2 cut(s) | 371, 1836 |
| Eco57I | CTGAAG | 3 cut(s) | 546, 1401, 1897 |
| EcoRI | GAATTC | 1 cut(s) | 481 |
| EcoRII | CCWGG | 3 cut(s) | 1507, 1612, 2047 |
| EcoRV | GATATC | 1 cut(s) | 1751 |
| EcoT14I | CCWWGG | 1 cut(s) | 2446 |
| EcoT22I | ATGCAT | 1 cut(s) | 1452 |
| ErhI | CCWWGG | 1 cut(s) | 2446 |
| FaqI | GGGAC | 1 cut(s) | 1056 |
| FauNDI | CATATG | 1 cut(s) | 2160 |
| FblI | GTMKAC | 1 cut(s) | 1726 |
| Fnu4HI | GCNGC | 5 cut(s) | 13, 323, 1519, 2053, 2117 |
| Fsp4HI | GCNGC | 5 cut(s) | 13, 323, 1519, 2053, 2117 |
| FspBI | CTAG | 8 cut(s) | 578, 693, 779, 989, 1232, 1796, 1994, 2036 |
| GlaI | GCGC | 2 cut(s) | 548, 1517 |
| GluI | GCNGC | 5 cut(s) | 13, 323, 1519, 2053, 2117 |
| GsaI | CCCAGC | 1 cut(s) | 1607 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HapII | CCGG | 3 cut(s) | 1839, 2274, 2333 |
| HgaI | GACGC | 1 cut(s) | 1799 |
| HhaI | GCGC | 2 cut(s) | 549, 1518 |
| Hin6I | GCGC | 2 cut(s) | 547, 1516 |
| HinP1I | GCGC | 2 cut(s) | 547, 1516 |
| HincII | GTYRAC | 1 cut(s) | 745 |
| HindII | GTYRAC | 1 cut(s) | 745 |
| HindIII | AAGCTT | 2 cut(s) | 1083, 2318 |
| HinfI | GANTC | 9 cut(s) | 215, 296, 500, 585, 867, 1493, 1668, 1942, 2254 |
| HpaII | CCGG | 3 cut(s) | 1839, 2274, 2333 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy166II | GTNNAC | 7 cut(s) | 745, 776, 910, 1690, 1727, 1958, 2102 |
| Hpy188I | TCNGA | 6 cut(s) | 231, 352, 1381, 1836, 1890, 1916 |
| Hpy8I | GTNNAC | 7 cut(s) | 745, 776, 910, 1690, 1727, 1958, 2102 |
| Hpy99I | CGWCG | 1 cut(s) | 2266 |
| HpyCH4III | ACNGT | 3 cut(s) | 1724, 1962, 2190 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 12, 314, 1518, 2061, 2113 |
| HpyF3I | CTNAG | 6 cut(s) | 68, 619, 1608, 1802, 1877, 1898 |
| HspAI | GCGC | 2 cut(s) | 547, 1516 |
| Kzo9I | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| LguI | GCTCTTC | 1 cut(s) | 1068 |
| LmnI | GCTCC | 1 cut(s) | 2182 |
| Lsp1109I | GCAGC | 5 cut(s) | 24, 309, 1530, 2064, 2103 |
| LweI | GCATC | 6 cut(s) | 436, 1048, 1444, 1531, 1720, 2441 |
| MaeI | CTAG | 8 cut(s) | 578, 693, 779, 989, 1232, 1796, 1994, 2036 |
| MaeIII | GTNAC | 2 cut(s) | 1530, 1880 |
| MalI | GATC | 5 cut(s) | 345, 921, 1353, 1414, 1977 |
| MboI | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| MfeI | CAATTG | 2 cut(s) | 207, 1983 |
| MlyI | GAGTC | 1 cut(s) | 2263 |
| MmeI | TCCRAC | 4 cut(s) | 562, 919, 1058, 1203 |
| Mph1103I | ATGCAT | 1 cut(s) | 1452 |
| MroXI | GAANNNNTTC | 2 cut(s) | 589, 1310 |
| MseI | TTAA | 8 cut(s) | 452, 1032, 1736, 2066, 2076, 2085, 2298, 2430 |
| MslI | CAYNNNNRTG | 2 cut(s) | 262, 1632 |
| MspA1I | CMGCKG | 2 cut(s) | 1607, 2107 |
| MspI | CCGG | 3 cut(s) | 1839, 2274, 2333 |
| MspR9I | CCNGG | 3 cut(s) | 1509, 1614, 2049 |
| MunI | CAATTG | 2 cut(s) | 207, 1983 |
| Mva1269I | GAATGC | 2 cut(s) | 1639, 2208 |
| MvaI | CCWGG | 3 cut(s) | 1509, 1614, 2049 |
| MvnI | CGCG | 2 cut(s) | 1491, 1536 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 12, 314, 1518, 2061, 2113 |
| NdeI | CATATG | 1 cut(s) | 2160 |
| NdeII | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| NlaIV | GGNNCC | 1 cut(s) | 850 |
| NmuCI | GTSAC | 1 cut(s) | 1880 |
| NsiI | ATGCAT | 1 cut(s) | 1452 |
| NspI | RCATGY | 4 cut(s) | 1329, 1450, 1631, 1906 |
| NspV | TTCGAA | 1 cut(s) | 2315 |
| PaeI | GCATGC | 2 cut(s) | 1631, 1906 |
| PciSI | GCTCTTC | 1 cut(s) | 1068 |
| PctI | GAATGC | 2 cut(s) | 1639, 2208 |
| PdmI | GAANNNNTTC | 2 cut(s) | 589, 1310 |
| PfeI | GAWTC | 8 cut(s) | 215, 296, 500, 585, 867, 1493, 1668, 1942 |
| PkrI | GCNGC | 5 cut(s) | 14, 324, 1520, 2054, 2118 |
| PleI | GAGTC | 1 cut(s) | 2262 |
| PpsI | GAGTC | 1 cut(s) | 2262 |
| PsiI | TTATAA | 1 cut(s) | 980 |
| Psp6I | CCWGG | 3 cut(s) | 1507, 1612, 2047 |
| PspFI | CCCAGC | 1 cut(s) | 1603 |
| PspGI | CCWGG | 3 cut(s) | 1507, 1612, 2047 |
| PspN4I | GGNNCC | 1 cut(s) | 850 |
| PspPI | GGNCC | 2 cut(s) | 371, 1836 |
| PvuII | CAGCTG | 2 cut(s) | 1607, 2107 |
| RsaI | GTAC | 4 cut(s) | 357, 1201, 1856, 1957 |
| RsaNI | GTAC | 4 cut(s) | 356, 1200, 1855, 1956 |
| RseI | CAYNNNNRTG | 2 cut(s) | 262, 1632 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1836 |
| RsrII | CGGWCCG | 1 cut(s) | 1836 |
| SapI | GCTCTTC | 1 cut(s) | 1068 |
| SaqAI | TTAA | 8 cut(s) | 452, 1032, 1736, 2066, 2076, 2085, 2298, 2430 |
| SatI | GCNGC | 5 cut(s) | 13, 323, 1519, 2053, 2117 |
| Sau3AI | GATC | 5 cut(s) | 343, 919, 1351, 1412, 1975 |
| Sau96I | GGNCC | 2 cut(s) | 371, 1836 |
| SchI | GAGTC | 1 cut(s) | 2263 |
| ScrFI | CCNGG | 3 cut(s) | 1509, 1614, 2049 |
| SfaNI | GCATC | 6 cut(s) | 436, 1048, 1444, 1531, 1720, 2441 |
| SfcI | CTRYAG | 1 cut(s) | 2136 |
| SfuI | TTCGAA | 1 cut(s) | 2315 |
| SinI | GGWCC | 2 cut(s) | 371, 1836 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 262, 1632 |
| SmlI | CTYRAG | 8 cut(s) | 1007, 1555, 1663, 1673, 1706, 1931, 2230, 2321 |
| SmoI | CTYRAG | 8 cut(s) | 1007, 1555, 1663, 1673, 1706, 1931, 2230, 2321 |
| SpeI | ACTAGT | 1 cut(s) | 778 |
| SphI | GCATGC | 2 cut(s) | 1631, 1906 |
| SsiI | CCGC | 2 cut(s) | 1489, 2399 |
| SspI | AATATT | 2 cut(s) | 932, 1311 |
| SspMI | CTAG | 8 cut(s) | 578, 693, 779, 989, 1232, 1796, 1994, 2036 |
| StyD4I | CCNGG | 3 cut(s) | 1507, 1612, 2047 |
| StyI | CCWWGG | 1 cut(s) | 2446 |
| TaaI | ACNGT | 3 cut(s) | 1724, 1962, 2190 |
| TaqI | TCGA | 2 cut(s) | 342, 2315 |
| TatI | WGTACW | 2 cut(s) | 1854, 1955 |
| TfiI | GAWTC | 8 cut(s) | 215, 296, 500, 585, 867, 1493, 1668, 1942 |
| Tru1I | TTAA | 8 cut(s) | 452, 1032, 1736, 2066, 2076, 2085, 2298, 2430 |
| Tru9I | TTAA | 8 cut(s) | 452, 1032, 1736, 2066, 2076, 2085, 2298, 2430 |
| TscAI | CASTG | 4 cut(s) | 124, 324, 1272, 2176 |
| TseFI | GTSAC | 1 cut(s) | 1880 |
| TseI | GCWGC | 5 cut(s) | 12, 322, 1518, 2052, 2116 |
| Tsp45I | GTSAC | 1 cut(s) | 1880 |
| TspGWI | ACGGA | 1 cut(s) | 317 |
| TspRI | CASTG | 4 cut(s) | 124, 324, 1272, 2176 |
| VpaK11BI | GGWCC | 2 cut(s) | 371, 1836 |
| XapI | RAATTY | 6 cut(s) | 288, 481, 722, 728, 1254, 2041 |
| XbaI | TCTAGA | 2 cut(s) | 988, 1993 |
| XceI | RCATGY | 4 cut(s) | 1329, 1450, 1631, 1906 |
| XmiI | GTMKAC | 1 cut(s) | 1726 |
| XmnI | GAANNNNTTC | 2 cut(s) | 589, 1310 |
| XspI | CTAG | 8 cut(s) | 578, 693, 779, 989, 1232, 1796, 1994, 2036 |
| Zsp2I | ATGCAT | 1 cut(s) | 1452 |