TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 165 | 3.7e-49 | TIR domain |
| TIR_2 | PF13676 | 21 - 124 | 2.2e-16 | TIR domain |
| WHD_ROQ1 | PF23282 | 256 - 303 | 8e-11 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 375 - 481 | 4.4e-14 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 401 - 486 | 4.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 479 - 530 | 2.6e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 554 - 631 | 3.3e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 623, 647 |
| AarI | CACCTGC | 1 cut(s) | 918 |
| Acc36I | ACCTGC | 1 cut(s) | 918 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 883 |
| AccI | GTMKAC | 2 cut(s) | 538, 1331 |
| AciI | CCGC | 3 cut(s) | 1876, 1988, 2118 |
| AclWI | GGATC | 5 cut(s) | 152, 338, 704, 2118, 2131 |
| AcoI | YGGCCR | 1 cut(s) | 1834 |
| AcsI | RAATTY | 3 cut(s) | 288, 481, 1792 |
| AcuI | CTGAAG | 3 cut(s) | 789, 1319, 1761 |
| AfaI | GTAC | 5 cut(s) | 357, 684, 1176, 1194, 1914 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 624, 883 |
| AflIII | ACRYGT | 1 cut(s) | 964 |
| AjnI | CCWGG | 2 cut(s) | 922, 1114 |
| AluBI | AGCT | 9 cut(s) | 72, 182, 438, 674, 1291, 1456, 1504, 1882, 1900 |
| AluI | AGCT | 9 cut(s) | 72, 182, 438, 674, 1291, 1456, 1504, 1882, 1900 |
| Alw26I | GTCTC | 2 cut(s) | 744, 1427 |
| AlwI | GGATC | 5 cut(s) | 152, 338, 704, 2118, 2131 |
| Ama87I | CYCGRG | 2 cut(s) | 1067, 1823 |
| AoxI | GGCC | 3 cut(s) | 585, 1834, 2026 |
| ApeKI | GCWGC | 2 cut(s) | 203, 322 |
| ApoI | RAATTY | 3 cut(s) | 288, 481, 1792 |
| AseI | ATTAAT | 1 cut(s) | 1008 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1857 |
| AspS9I | GGNCC | 1 cut(s) | 2027 |
| AsuHPI | GGTGA | 1 cut(s) | 1593 |
| AvaI | CYCGRG | 2 cut(s) | 1067, 1823 |
| BaeGI | GKGCMC | 1 cut(s) | 1539 |
| BalI | TGGCCA | 1 cut(s) | 1836 |
| BamHI | GGATCC | 1 cut(s) | 2123 |
| BauI | CACGAG | 1 cut(s) | 1931 |
| BbsI | GAAGAC | 4 cut(s) | 656, 859, 960, 1385 |
| BbvI | GCAGC | 2 cut(s) | 190, 309 |
| BccI | CCATC | 2 cut(s) | 814, 1912 |
| BceAI | ACGGC | 1 cut(s) | 2131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 776, 810 |
| BciT130I | CCWGG | 2 cut(s) | 924, 1116 |
| BciVI | GTATCC | 1 cut(s) | 1937 |
| BcoDI | GTCTC | 2 cut(s) | 744, 1427 |
| BfaI | CTAG | 5 cut(s) | 191, 1335, 1692, 1845, 2064 |
| BfuAI | ACCTGC | 1 cut(s) | 918 |
| BfuI | GTATCC | 1 cut(s) | 1937 |
| BglII | AGATCT | 2 cut(s) | 827, 1429 |
| BisI | GCNGC | 3 cut(s) | 204, 323, 1876 |
| BlpI | GCTNAGC | 1 cut(s) | 1771 |
| BlsI | GCNGC | 3 cut(s) | 205, 324, 1877 |
| BmcAI | AGTACT | 1 cut(s) | 684 |
| Bme1390I | CCNGG | 2 cut(s) | 924, 1116 |
| BmeT110I | CYCGRG | 2 cut(s) | 1067, 1823 |
| BmgT120I | GGNCC | 1 cut(s) | 2027 |
| BmiI | GGNNCC | 2 cut(s) | 613, 2125 |
| BmrFI | CCNGG | 2 cut(s) | 924, 1116 |
| BmrI | ACTGGG | 2 cut(s) | 695, 752 |
| BmsI | GCATC | 6 cut(s) | 263, 852, 1757, 1975, 2044, 2066 |
| BmuI | ACTGGG | 2 cut(s) | 695, 752 |
| BpiI | GAAGAC | 4 cut(s) | 656, 859, 960, 1385 |
| BpmI | CTGGAG | 2 cut(s) | 460, 1304 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1771 |
| BsaAI | YACGTR | 1 cut(s) | 1196 |
| BsaBI | GATNNNNATC | 2 cut(s) | 342, 1434 |
| BsaJI | CCNNGG | 1 cut(s) | 1114 |
| BsaWI | WCCGGW | 1 cut(s) | 2126 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 624, 883 |
| Bse1I | ACTGG | 3 cut(s) | 690, 747, 1312 |
| Bse3DI | GCAATG | 1 cut(s) | 88 |
| Bse8I | GATNNNNATC | 2 cut(s) | 342, 1434 |
| BseBI | CCWGG | 2 cut(s) | 924, 1116 |
| BseDI | CCNNGG | 1 cut(s) | 1114 |
| BseGI | GGATG | 7 cut(s) | 160, 280, 867, 1592, 1772, 1924, 2083 |
| BseJI | GATNNNNATC | 2 cut(s) | 342, 1434 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 624, 883 |
| BseMI | GCAATG | 1 cut(s) | 88 |
| BseMII | CTCAG | 3 cut(s) | 59, 59, 1004 |
| BseNI | ACTGG | 3 cut(s) | 690, 747, 1312 |
| BseRI | GAGGAG | 2 cut(s) | 1531, 2006 |
| BseSI | GKGCMC | 1 cut(s) | 1539 |
| BseXI | GCAGC | 2 cut(s) | 190, 309 |
| BsgI | GTGCAG | 1 cut(s) | 952 |
| BshFI | GGCC | 3 cut(s) | 587, 1836, 2028 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1067, 1823 |
| BsiSI | CCGG | 1 cut(s) | 2127 |
| BslFI | GGGAC | 2 cut(s) | 900, 1281 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 624, 883 |
| BsmAI | GTCTC | 2 cut(s) | 744, 1427 |
| BsmFI | GGGAC | 2 cut(s) | 900, 1281 |
| BsmI | GAATGC | 3 cut(s) | 302, 1344, 1659 |
| BsnI | GGCC | 3 cut(s) | 587, 1836, 2028 |
| BsoBI | CYCGRG | 2 cut(s) | 1067, 1823 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1539 |
| Bsp1407I | TGTACA | 1 cut(s) | 1174 |
| Bsp143I | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1771 |
| BspACI | CCGC | 3 cut(s) | 1876, 1988, 2118 |
| BspANI | GGCC | 3 cut(s) | 587, 1836, 2028 |
| BspCNI | CTCAG | 3 cut(s) | 58, 60, 1005 |
| BspHI | TCATGA | 1 cut(s) | 604 |
| BspLI | GGNNCC | 2 cut(s) | 613, 2125 |
| BspMI | ACCTGC | 1 cut(s) | 918 |
| BspPI | GGATC | 5 cut(s) | 152, 338, 704, 2118, 2131 |
| BsrDI | GCAATG | 1 cut(s) | 88 |
| BsrGI | TGTACA | 1 cut(s) | 1174 |
| BsrI | ACTGG | 3 cut(s) | 690, 747, 1312 |
| BssECI | CCNNGG | 1 cut(s) | 1114 |
| BssMI | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| BssSI | CACGAG | 1 cut(s) | 1931 |
| Bst2BI | CACGAG | 1 cut(s) | 1931 |
| Bst2UI | CCWGG | 2 cut(s) | 924, 1116 |
| Bst4CI | ACNGT | 5 cut(s) | 841, 905, 1022, 1144, 1599 |
| Bst6I | CTCTTC | 3 cut(s) | 700, 719, 742 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 871 |
| BstAUI | TGTACA | 1 cut(s) | 1174 |
| BstBAI | YACGTR | 1 cut(s) | 1196 |
| BstC8I | GCNNGC | 1 cut(s) | 1880 |
| BstDEI | CTNAG | 6 cut(s) | 45, 68, 857, 1013, 1721, 1771 |
| BstF5I | GGATG | 7 cut(s) | 160, 280, 867, 1592, 1772, 1924, 2083 |
| BstKTI | GATC | 8 cut(s) | 160, 346, 712, 760, 830, 1432, 1623, 2126 |
| BstMAI | GTCTC | 2 cut(s) | 744, 1427 |
| BstMBI | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 78, 871, 2078 |
| BstNI | CCWGG | 2 cut(s) | 924, 1116 |
| BstNSI | RCATGY | 1 cut(s) | 968 |
| BstSCI | CCNGG | 2 cut(s) | 922, 1114 |
| BstSLI | GKGCMC | 1 cut(s) | 1539 |
| BstV1I | GCAGC | 2 cut(s) | 190, 309 |
| BstV2I | GAAGAC | 4 cut(s) | 656, 859, 960, 1385 |
| BstX2I | RGATCY | 4 cut(s) | 709, 827, 1429, 2123 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 720, 2159 |
| BstYI | RGATCY | 4 cut(s) | 709, 827, 1429, 2123 |
| BsuI | GTATCC | 1 cut(s) | 1937 |
| BsuRI | GGCC | 3 cut(s) | 587, 1836, 2028 |
| BtgZI | GCGATG | 1 cut(s) | 801 |
| BtsCI | GGATG | 7 cut(s) | 160, 280, 867, 1592, 1772, 1924, 2083 |
| BtsI | GCAGTG | 2 cut(s) | 117, 1408 |
| BtsIMutI | CAGTG | 5 cut(s) | 53, 117, 1018, 1305, 1408 |
| BveI | ACCTGC | 1 cut(s) | 918 |
| Cac8I | GCNNGC | 1 cut(s) | 1880 |
| CciI | TCATGA | 1 cut(s) | 604 |
| Cfr13I | GGNCC | 1 cut(s) | 2027 |
| Csp6I | GTAC | 5 cut(s) | 356, 683, 1175, 1193, 1913 |
| CviAII | CATG | 8 cut(s) | 264, 301, 605, 848, 965, 1366, 1484, 1910 |
| CviQI | GTAC | 5 cut(s) | 356, 683, 1175, 1193, 1913 |
| DdeI | CTNAG | 6 cut(s) | 45, 68, 857, 1013, 1721, 1771 |
| DpnI | GATC | 8 cut(s) | 159, 345, 711, 759, 829, 1431, 1622, 2125 |
| DpnII | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| DraI | TTTAAA | 1 cut(s) | 1051 |
| EaeI | YGGCCR | 1 cut(s) | 1834 |
| Eam1104I | CTCTTC | 3 cut(s) | 700, 719, 742 |
| EarI | CTCTTC | 3 cut(s) | 700, 719, 742 |
| EciI | GGCGGA | 1 cut(s) | 2133 |
| Eco57I | CTGAAG | 3 cut(s) | 789, 1319, 1761 |
| Eco88I | CYCGRG | 2 cut(s) | 1067, 1823 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2027 |
| EcoRI | GAATTC | 2 cut(s) | 288, 481 |
| EcoRII | CCWGG | 2 cut(s) | 922, 1114 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 302, 2059 |
| FaeI | CATG | 8 cut(s) | 267, 304, 608, 851, 968, 1369, 1487, 1913 |
| FaqI | GGGAC | 2 cut(s) | 900, 1281 |
| FatI | CATG | 8 cut(s) | 263, 300, 604, 847, 964, 1365, 1483, 1909 |
| FblI | GTMKAC | 2 cut(s) | 538, 1331 |
| Fnu4HI | GCNGC | 3 cut(s) | 204, 323, 1876 |
| FokI | GGATG | 7 cut(s) | 167, 287, 874, 1599, 1779, 1931, 2070 |
| Fsp4HI | GCNGC | 3 cut(s) | 204, 323, 1876 |
| FspBI | CTAG | 5 cut(s) | 191, 1335, 1692, 1845, 2064 |
| GluI | GCNGC | 3 cut(s) | 204, 323, 1876 |
| GsuI | CTGGAG | 2 cut(s) | 460, 1304 |
| HaeIII | GGCC | 3 cut(s) | 587, 1836, 2028 |
| HapII | CCGG | 1 cut(s) | 2127 |
| Hin1II | CATG | 8 cut(s) | 267, 304, 608, 851, 968, 1369, 1487, 1913 |
| HincII | GTYRAC | 4 cut(s) | 261, 1036, 1111, 1246 |
| HindII | GTYRAC | 4 cut(s) | 261, 1036, 1111, 1246 |
| HindIII | AAGCTT | 4 cut(s) | 1289, 1454, 1502, 1880 |
| HinfI | GANTC | 9 cut(s) | 138, 215, 638, 908, 1015, 1027, 1168, 1717, 1868 |
| HpaI | GTTAAC | 1 cut(s) | 1246 |
| HpaII | CCGG | 1 cut(s) | 2127 |
| HphI | GGTGA | 1 cut(s) | 1593 |
| Hpy166II | GTNNAC | 9 cut(s) | 102, 261, 539, 901, 1036, 1111, 1193, 1246, 1332 |
| Hpy188I | TCNGA | 9 cut(s) | 69, 352, 598, 1014, 1026, 1299, 1741, 1887, 2041 |
| Hpy8I | GTNNAC | 9 cut(s) | 102, 261, 539, 901, 1036, 1111, 1193, 1246, 1332 |
| HpyAV | CCTTC | 5 cut(s) | 397, 509, 611, 1079, 1294 |
| HpyCH4III | ACNGT | 5 cut(s) | 841, 905, 1022, 1144, 1599 |
| HpyCH4IV | ACGT | 2 cut(s) | 1195, 1328 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 78, 871, 2078 |
| HpyF3I | CTNAG | 6 cut(s) | 45, 68, 857, 1013, 1721, 1771 |
| HpySE526I | ACGT | 2 cut(s) | 1195, 1328 |
| Hsp92II | CATG | 8 cut(s) | 267, 304, 608, 851, 968, 1369, 1487, 1913 |
| KspAI | GTTAAC | 1 cut(s) | 1246 |
| Kzo9I | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| LmnI | GCTCC | 4 cut(s) | 179, 611, 879, 1993 |
| Lsp1109I | GCAGC | 2 cut(s) | 190, 309 |
| LweI | GCATC | 6 cut(s) | 263, 852, 1757, 1975, 2044, 2066 |
| MaeI | CTAG | 5 cut(s) | 191, 1335, 1692, 1845, 2064 |
| MaeII | ACGT | 2 cut(s) | 1195, 1328 |
| MaeIII | GTNAC | 4 cut(s) | 763, 1016, 1599, 1724 |
| MalI | GATC | 8 cut(s) | 159, 345, 711, 759, 829, 1431, 1622, 2125 |
| MboI | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MflI | RGATCY | 4 cut(s) | 709, 827, 1429, 2123 |
| MhlI | GDGCHC | 1 cut(s) | 1539 |
| MlsI | TGGCCA | 1 cut(s) | 1836 |
| MluNI | TGGCCA | 1 cut(s) | 1836 |
| MlyI | GAGTC | 1 cut(s) | 1024 |
| MmeI | TCCRAC | 1 cut(s) | 1845 |
| Mox20I | TGGCCA | 1 cut(s) | 1836 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 302, 2059 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1857 |
| MscI | TGGCCA | 1 cut(s) | 1836 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2040 |
| Msp20I | TGGCCA | 1 cut(s) | 1836 |
| MspI | CCGG | 1 cut(s) | 2127 |
| MspR9I | CCNGG | 2 cut(s) | 924, 1116 |
| MunI | CAATTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 3 cut(s) | 302, 1344, 1659 |
| MvaI | CCWGG | 2 cut(s) | 924, 1116 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 78, 871, 2078 |
| NdeII | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| NlaIII | CATG | 8 cut(s) | 267, 304, 608, 851, 968, 1369, 1487, 1913 |
| NlaIV | GGNNCC | 2 cut(s) | 613, 2125 |
| NmuCI | GTSAC | 3 cut(s) | 1016, 1599, 1724 |
| NsiI | ATGCAT | 3 cut(s) | 256, 302, 2059 |
| NspI | RCATGY | 1 cut(s) | 968 |
| PaeR7I | CTCGAG | 1 cut(s) | 1067 |
| PagI | TCATGA | 1 cut(s) | 604 |
| PaqCI | CACCTGC | 1 cut(s) | 918 |
| PciI | ACATGT | 1 cut(s) | 964 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 396, 1921 |
| PctI | GAATGC | 3 cut(s) | 302, 1344, 1659 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1857 |
| PfeI | GAWTC | 8 cut(s) | 138, 215, 638, 908, 1027, 1168, 1717, 1868 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 883 |
| PkrI | GCNGC | 3 cut(s) | 205, 324, 1877 |
| PleI | GAGTC | 1 cut(s) | 1023 |
| PpsI | GAGTC | 1 cut(s) | 1023 |
| Ppu21I | YACGTR | 1 cut(s) | 1196 |
| PscI | ACATGT | 1 cut(s) | 964 |
| PshBI | ATTAAT | 1 cut(s) | 1008 |
| PsiI | TTATAA | 2 cut(s) | 623, 647 |
| Psp6I | CCWGG | 2 cut(s) | 922, 1114 |
| PspGI | CCWGG | 2 cut(s) | 922, 1114 |
| PspN4I | GGNNCC | 2 cut(s) | 613, 2125 |
| PspPI | GGNCC | 1 cut(s) | 2027 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1905, 1937 |
| PsuI | RGATCY | 4 cut(s) | 709, 827, 1429, 2123 |
| RsaI | GTAC | 5 cut(s) | 357, 684, 1176, 1194, 1914 |
| RsaNI | GTAC | 5 cut(s) | 356, 683, 1175, 1193, 1913 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2040 |
| SatI | GCNGC | 3 cut(s) | 204, 323, 1876 |
| Sau3AI | GATC | 8 cut(s) | 157, 343, 709, 757, 827, 1429, 1620, 2123 |
| Sau96I | GGNCC | 1 cut(s) | 2027 |
| ScaI | AGTACT | 1 cut(s) | 684 |
| SchI | GAGTC | 1 cut(s) | 1024 |
| ScrFI | CCNGG | 2 cut(s) | 924, 1116 |
| SduI | GDGCHC | 1 cut(s) | 1539 |
| SfaNI | GCATC | 6 cut(s) | 263, 852, 1757, 1975, 2044, 2066 |
| Sfr274I | CTCGAG | 1 cut(s) | 1067 |
| SlaI | CTCGAG | 1 cut(s) | 1067 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2040 |
| SmlI | CTYRAG | 1 cut(s) | 1067 |
| SmoI | CTYRAG | 1 cut(s) | 1067 |
| SsiI | CCGC | 3 cut(s) | 1876, 1988, 2118 |
| SspMI | CTAG | 5 cut(s) | 191, 1335, 1692, 1845, 2064 |
| StyD4I | CCNGG | 2 cut(s) | 922, 1114 |
| TaaI | ACNGT | 5 cut(s) | 841, 905, 1022, 1144, 1599 |
| TaiI | ACGT | 2 cut(s) | 1198, 1331 |
| TaqI | TCGA | 5 cut(s) | 342, 760, 1043, 1068, 1425 |
| TatI | WGTACW | 2 cut(s) | 682, 1174 |
| TauI | GCSGC | 1 cut(s) | 1878 |
| TfiI | GAWTC | 8 cut(s) | 138, 215, 638, 908, 1027, 1168, 1717, 1868 |
| TscAI | CASTG | 5 cut(s) | 53, 124, 1025, 1312, 1408 |
| TseFI | GTSAC | 3 cut(s) | 1016, 1599, 1724 |
| TseI | GCWGC | 2 cut(s) | 203, 322 |
| Tsp45I | GTSAC | 3 cut(s) | 1016, 1599, 1724 |
| TspDTI | ATGAA | 5 cut(s) | 291, 317, 593, 1692, 2061 |
| TspGWI | ACGGA | 2 cut(s) | 511, 624 |
| TspRI | CASTG | 5 cut(s) | 53, 124, 1025, 1312, 1408 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 883 |
| VspI | ATTAAT | 1 cut(s) | 1008 |
| XapI | RAATTY | 3 cut(s) | 288, 481, 1792 |
| XbaI | TCTAGA | 1 cut(s) | 190 |
| XceI | RCATGY | 1 cut(s) | 968 |
| XhoI | CTCGAG | 1 cut(s) | 1067 |
| XmiI | GTMKAC | 2 cut(s) | 538, 1331 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1857 |
| XspI | CTAG | 5 cut(s) | 191, 1335, 1692, 1845, 2064 |
| ZrmI | AGTACT | 1 cut(s) | 684 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 302, 2059 |