TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 15 - 83 | 4.3e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 271 - 354 | 8.5e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 272 - 355 | 1.2e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 354 - 400 | 7.5e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 432 - 499 | 2.8e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 149 |
| AccI | GTMKAC | 1 cut(s) | 928 |
| AccIII | TCCGGA | 1 cut(s) | 793 |
| AciI | CCGC | 2 cut(s) | 38, 196 |
| AclWI | GGATC | 1 cut(s) | 29 |
| AcsI | RAATTY | 7 cut(s) | 595, 865, 1018, 1035, 1459, 1579, 1594 |
| AcuI | CTGAAG | 2 cut(s) | 405, 465 |
| AfaI | GTAC | 1 cut(s) | 1549 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1295 |
| AflII | CTTAAG | 2 cut(s) | 1324, 1399 |
| AjnI | CCWGG | 3 cut(s) | 133, 256, 1249 |
| AluBI | AGCT | 9 cut(s) | 389, 538, 577, 748, 787, 898, 1453, 1486, 1603 |
| AluI | AGCT | 9 cut(s) | 389, 538, 577, 748, 787, 898, 1453, 1486, 1603 |
| Alw21I | GWGCWC | 1 cut(s) | 816 |
| Alw26I | GTCTC | 2 cut(s) | 464, 785 |
| AlwI | GGATC | 1 cut(s) | 29 |
| Aor13HI | TCCGGA | 1 cut(s) | 793 |
| AoxI | GGCC | 3 cut(s) | 448, 1202, 1297 |
| ApeKI | GCWGC | 2 cut(s) | 840, 1371 |
| ApoI | RAATTY | 7 cut(s) | 595, 865, 1018, 1035, 1459, 1579, 1594 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 208, 240 |
| AseI | ATTAAT | 2 cut(s) | 1113, 1244 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 666 |
| AspS9I | GGNCC | 1 cut(s) | 1202 |
| AsuC2I | CCSGG | 1 cut(s) | 530 |
| BbsI | GAAGAC | 1 cut(s) | 992 |
| Bbv12I | GWGCWC | 1 cut(s) | 816 |
| BbvI | GCAGC | 2 cut(s) | 827, 1358 |
| BccI | CCATC | 7 cut(s) | 387, 394, 523, 902, 1153, 1213, 1277 |
| BceAI | ACGGC | 1 cut(s) | 1242 |
| BciT130I | CCWGG | 3 cut(s) | 135, 258, 1251 |
| BclI | TGATCA | 1 cut(s) | 549 |
| BcnI | CCSGG | 1 cut(s) | 530 |
| BcoDI | GTCTC | 2 cut(s) | 464, 785 |
| BfaI | CTAG | 3 cut(s) | 347, 645, 1005 |
| BfmI | CTRYAG | 1 cut(s) | 1536 |
| BfrI | CTTAAG | 2 cut(s) | 1324, 1399 |
| BisI | GCNGC | 2 cut(s) | 841, 1372 |
| BlsI | GCNGC | 2 cut(s) | 842, 1373 |
| Bme1390I | CCNGG | 4 cut(s) | 135, 258, 530, 1251 |
| BmgT120I | GGNCC | 1 cut(s) | 1202 |
| BmiI | GGNNCC | 2 cut(s) | 876, 1256 |
| BmrFI | CCNGG | 4 cut(s) | 135, 258, 530, 1251 |
| BmsI | GCATC | 4 cut(s) | 189, 689, 1043, 1092 |
| BpiI | GAAGAC | 1 cut(s) | 992 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 707, 739 |
| BpuEI | CTTGAG | 7 cut(s) | 493, 698, 767, 829, 994, 1475, 1489 |
| BpuMI | CCSGG | 1 cut(s) | 530 |
| BsaJI | CCNNGG | 2 cut(s) | 1217, 1250 |
| BsaWI | WCCGGW | 1 cut(s) | 793 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 495, 525 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1295 |
| Bse1I | ACTGG | 3 cut(s) | 919, 1499, 1560 |
| Bse3DI | GCAATG | 2 cut(s) | 1070, 1152 |
| BseAI | TCCGGA | 1 cut(s) | 793 |
| BseBI | CCWGG | 3 cut(s) | 135, 258, 1251 |
| BseDI | CCNNGG | 2 cut(s) | 1217, 1250 |
| BseGI | GGATG | 7 cut(s) | 204, 379, 538, 704, 802, 1058, 1264 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1295 |
| BseMI | GCAATG | 2 cut(s) | 1070, 1152 |
| BseMII | CTCAG | 1 cut(s) | 410 |
| BseNI | ACTGG | 3 cut(s) | 919, 1499, 1560 |
| BseXI | GCAGC | 2 cut(s) | 827, 1358 |
| BshFI | GGCC | 3 cut(s) | 450, 1204, 1299 |
| BsiHKAI | GWGCWC | 1 cut(s) | 816 |
| BsiSI | CCGG | 2 cut(s) | 530, 794 |
| BslFI | GGGAC | 4 cut(s) | 151, 334, 925, 1557 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1295 |
| BsmAI | GTCTC | 2 cut(s) | 464, 785 |
| BsmBI | CGTCTC | 1 cut(s) | 464 |
| BsmFI | GGGAC | 4 cut(s) | 151, 334, 925, 1557 |
| BsmI | GAATGC | 2 cut(s) | 380, 1145 |
| BsnI | GGCC | 3 cut(s) | 450, 1204, 1299 |
| Bsp1286I | GDGCHC | 1 cut(s) | 816 |
| Bsp13I | TCCGGA | 1 cut(s) | 793 |
| Bsp143I | GATC | 3 cut(s) | 34, 94, 549 |
| Bsp19I | CCATGG | 1 cut(s) | 1217 |
| BspACI | CCGC | 2 cut(s) | 38, 196 |
| BspANI | GGCC | 3 cut(s) | 450, 1204, 1299 |
| BspCNI | CTCAG | 1 cut(s) | 409 |
| BspEI | TCCGGA | 1 cut(s) | 793 |
| BspLI | GGNNCC | 2 cut(s) | 876, 1256 |
| BspMAI | CTGCAG | 1 cut(s) | 1540 |
| BspPI | GGATC | 1 cut(s) | 29 |
| BspTI | CTTAAG | 2 cut(s) | 1324, 1399 |
| BsrDI | GCAATG | 2 cut(s) | 1070, 1152 |
| BsrI | ACTGG | 3 cut(s) | 919, 1499, 1560 |
| BssECI | CCNNGG | 2 cut(s) | 1217, 1250 |
| BssMI | GATC | 3 cut(s) | 34, 94, 549 |
| BssNAI | GTATAC | 1 cut(s) | 929 |
| BssT1I | CCWWGG | 1 cut(s) | 1217 |
| Bst1107I | GTATAC | 1 cut(s) | 929 |
| Bst2UI | CCWGG | 3 cut(s) | 135, 258, 1251 |
| Bst4CI | ACNGT | 2 cut(s) | 331, 458 |
| Bst6I | CTCTTC | 1 cut(s) | 730 |
| BstAFI | CTTAAG | 2 cut(s) | 1324, 1399 |
| BstDEI | CTNAG | 3 cut(s) | 285, 396, 1449 |
| BstDSI | CCRYGG | 1 cut(s) | 1217 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1293 |
| BstF5I | GGATG | 7 cut(s) | 204, 379, 538, 704, 802, 1058, 1264 |
| BstKTI | GATC | 3 cut(s) | 37, 97, 552 |
| BstMAI | GTCTC | 2 cut(s) | 464, 785 |
| BstMBI | GATC | 3 cut(s) | 34, 94, 549 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 846, 1228 |
| BstNI | CCWGG | 3 cut(s) | 135, 258, 1251 |
| BstNSI | RCATGY | 2 cut(s) | 72, 436 |
| BstSCI | CCNGG | 4 cut(s) | 133, 256, 528, 1249 |
| BstSFI | CTRYAG | 1 cut(s) | 1536 |
| BstV1I | GCAGC | 2 cut(s) | 827, 1358 |
| BstV2I | GAAGAC | 1 cut(s) | 992 |
| BstX2I | RGATCY | 1 cut(s) | 34 |
| BstYI | RGATCY | 1 cut(s) | 34 |
| BstZ17I | GTATAC | 1 cut(s) | 929 |
| BsuRI | GGCC | 3 cut(s) | 450, 1204, 1299 |
| BtgI | CCRYGG | 1 cut(s) | 1217 |
| BtgZI | GCGATG | 1 cut(s) | 49 |
| BtsCI | GGATG | 7 cut(s) | 204, 379, 538, 704, 802, 1058, 1264 |
| Cfr13I | GGNCC | 1 cut(s) | 1202 |
| Csp6I | GTAC | 1 cut(s) | 1548 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 852, 887 |
| CviAII | CATG | 6 cut(s) | 69, 203, 299, 433, 553, 1218 |
| CviQI | GTAC | 1 cut(s) | 1548 |
| DdeI | CTNAG | 3 cut(s) | 285, 396, 1449 |
| DpnI | GATC | 3 cut(s) | 36, 96, 551 |
| DpnII | GATC | 3 cut(s) | 34, 94, 549 |
| DraI | TTTAAA | 1 cut(s) | 79 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 149 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 149 |
| Eam1104I | CTCTTC | 1 cut(s) | 730 |
| EarI | CTCTTC | 1 cut(s) | 730 |
| Eco130I | CCWWGG | 1 cut(s) | 1217 |
| Eco147I | AGGCCT | 2 cut(s) | 450, 1299 |
| Eco32I | GATATC | 1 cut(s) | 1638 |
| Eco57I | CTGAAG | 2 cut(s) | 405, 465 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1293 |
| EcoRI | GAATTC | 1 cut(s) | 1594 |
| EcoRII | CCWGG | 3 cut(s) | 133, 256, 1249 |
| EcoRV | GATATC | 1 cut(s) | 1638 |
| EcoT14I | CCWWGG | 1 cut(s) | 1217 |
| EcoT22I | ATGCAT | 1 cut(s) | 204 |
| ErhI | CCWWGG | 1 cut(s) | 1217 |
| Esp3I | CGTCTC | 1 cut(s) | 464 |
| FaeI | CATG | 6 cut(s) | 72, 206, 302, 436, 556, 1221 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 278, 310 |
| FaqI | GGGAC | 4 cut(s) | 151, 334, 925, 1557 |
| FatI | CATG | 6 cut(s) | 68, 202, 298, 432, 552, 1217 |
| FbaI | TGATCA | 1 cut(s) | 549 |
| FblI | GTMKAC | 1 cut(s) | 928 |
| Fnu4HI | GCNGC | 2 cut(s) | 841, 1372 |
| FokI | GGATG | 7 cut(s) | 211, 366, 545, 711, 809, 1065, 1251 |
| Fsp4HI | GCNGC | 2 cut(s) | 841, 1372 |
| FspBI | CTAG | 3 cut(s) | 347, 645, 1005 |
| GluI | GCNGC | 2 cut(s) | 841, 1372 |
| HaeIII | GGCC | 3 cut(s) | 450, 1204, 1299 |
| HapII | CCGG | 2 cut(s) | 530, 794 |
| Hin1II | CATG | 6 cut(s) | 72, 206, 302, 436, 556, 1221 |
| HincII | GTYRAC | 1 cut(s) | 1442 |
| HindII | GTYRAC | 1 cut(s) | 1442 |
| HindIII | AAGCTT | 6 cut(s) | 387, 746, 785, 896, 1451, 1484 |
| HinfI | GANTC | 8 cut(s) | 7, 522, 667, 673, 718, 760, 859, 1471 |
| HpaII | CCGG | 2 cut(s) | 530, 794 |
| Hpy166II | GTNNAC | 4 cut(s) | 263, 929, 1442, 1523 |
| Hpy188I | TCNGA | 6 cut(s) | 184, 399, 672, 993, 1164, 1513 |
| Hpy8I | GTNNAC | 4 cut(s) | 263, 929, 1442, 1523 |
| HpyCH4III | ACNGT | 2 cut(s) | 331, 458 |
| HpyCH4V | TGCA | 6 cut(s) | 202, 436, 774, 984, 1479, 1538 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 846, 1228 |
| HpyF3I | CTNAG | 3 cut(s) | 285, 396, 1449 |
| Hsp92II | CATG | 6 cut(s) | 72, 206, 302, 436, 556, 1221 |
| Kpn2I | TCCGGA | 1 cut(s) | 793 |
| Ksp22I | TGATCA | 1 cut(s) | 549 |
| Kzo9I | GATC | 3 cut(s) | 34, 94, 549 |
| LmnI | GCTCC | 6 cut(s) | 811, 883, 1236, 1254, 1349, 1633 |
| Lsp1109I | GCAGC | 2 cut(s) | 827, 1358 |
| LweI | GCATC | 4 cut(s) | 189, 689, 1043, 1092 |
| MaeI | CTAG | 3 cut(s) | 347, 645, 1005 |
| MaeIII | GTNAC | 4 cut(s) | 20, 210, 1331, 1531 |
| MalI | GATC | 3 cut(s) | 36, 96, 551 |
| MboI | GATC | 3 cut(s) | 34, 94, 549 |
| MboII | GAAGA | 8 cut(s) | 16, 401, 717, 782, 992, 1120, 1140, 1415 |
| MfeI | CAATTG | 1 cut(s) | 231 |
| MflI | RGATCY | 1 cut(s) | 34 |
| MhlI | GDGCHC | 1 cut(s) | 816 |
| MlyI | GAGTC | 2 cut(s) | 754, 1480 |
| MmeI | TCCRAC | 1 cut(s) | 948 |
| MnlI | CCTC | 9 cut(s) | 19, 79, 361, 461, 485, 510, 1017, 1296, 1585 |
| Mph1103I | ATGCAT | 1 cut(s) | 204 |
| MroI | TCCGGA | 1 cut(s) | 793 |
| MroXI | GAANNNNTTC | 1 cut(s) | 666 |
| MspCI | CTTAAG | 2 cut(s) | 1324, 1399 |
| MspI | CCGG | 2 cut(s) | 530, 794 |
| MspR9I | CCNGG | 4 cut(s) | 135, 258, 530, 1251 |
| MunI | CAATTG | 1 cut(s) | 231 |
| Mva1269I | GAATGC | 2 cut(s) | 380, 1145 |
| MvaI | CCWGG | 3 cut(s) | 135, 258, 1251 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 846, 1228 |
| NciI | CCSGG | 1 cut(s) | 530 |
| NcoI | CCATGG | 1 cut(s) | 1217 |
| NdeII | GATC | 3 cut(s) | 34, 94, 549 |
| NlaIII | CATG | 6 cut(s) | 72, 206, 302, 436, 556, 1221 |
| NlaIV | GGNNCC | 2 cut(s) | 876, 1256 |
| NmuCI | GTSAC | 1 cut(s) | 1331 |
| NsiI | ATGCAT | 1 cut(s) | 204 |
| NspI | RCATGY | 2 cut(s) | 72, 436 |
| PceI | AGGCCT | 2 cut(s) | 450, 1299 |
| PctI | GAATGC | 2 cut(s) | 380, 1145 |
| PdmI | GAANNNNTTC | 1 cut(s) | 666 |
| PfeI | GAWTC | 6 cut(s) | 7, 522, 667, 673, 718, 859 |
| PkrI | GCNGC | 2 cut(s) | 842, 1373 |
| PleI | GAGTC | 2 cut(s) | 754, 1479 |
| PpsI | GAGTC | 2 cut(s) | 754, 1479 |
| PshBI | ATTAAT | 2 cut(s) | 1113, 1244 |
| Psp6I | CCWGG | 3 cut(s) | 133, 256, 1249 |
| PspGI | CCWGG | 3 cut(s) | 133, 256, 1249 |
| PspN4I | GGNNCC | 2 cut(s) | 876, 1256 |
| PspPI | GGNCC | 1 cut(s) | 1202 |
| PstI | CTGCAG | 1 cut(s) | 1540 |
| PsuI | RGATCY | 1 cut(s) | 34 |
| RsaI | GTAC | 1 cut(s) | 1549 |
| RsaNI | GTAC | 1 cut(s) | 1548 |
| SatI | GCNGC | 2 cut(s) | 841, 1372 |
| Sau3AI | GATC | 3 cut(s) | 34, 94, 549 |
| Sau96I | GGNCC | 1 cut(s) | 1202 |
| SchI | GAGTC | 2 cut(s) | 754, 1480 |
| ScrFI | CCNGG | 4 cut(s) | 135, 258, 530, 1251 |
| SduI | GDGCHC | 1 cut(s) | 816 |
| SfaNI | GCATC | 4 cut(s) | 189, 689, 1043, 1092 |
| SfcI | CTRYAG | 1 cut(s) | 1536 |
| SmlI | CTYRAG | 9 cut(s) | 472, 677, 782, 844, 973, 1324, 1399, 1454, 1468 |
| SmoI | CTYRAG | 9 cut(s) | 472, 677, 782, 844, 973, 1324, 1399, 1454, 1468 |
| SseBI | AGGCCT | 2 cut(s) | 450, 1299 |
| SsiI | CCGC | 2 cut(s) | 38, 196 |
| SspI | AATATT | 1 cut(s) | 770 |
| SspMI | CTAG | 3 cut(s) | 347, 645, 1005 |
| StuI | AGGCCT | 2 cut(s) | 450, 1299 |
| StyD4I | CCNGG | 4 cut(s) | 133, 256, 528, 1249 |
| StyI | CCWWGG | 1 cut(s) | 1217 |
| TaaI | ACNGT | 2 cut(s) | 331, 458 |
| TaqI | TCGA | 4 cut(s) | 97, 372, 412, 525 |
| TatI | WGTACW | 1 cut(s) | 1547 |
| TfiI | GAWTC | 6 cut(s) | 7, 522, 667, 673, 718, 859 |
| TseFI | GTSAC | 1 cut(s) | 1331 |
| TseI | GCWGC | 2 cut(s) | 840, 1371 |
| Tsp45I | GTSAC | 1 cut(s) | 1331 |
| TspDTI | ATGAA | 4 cut(s) | 17, 287, 924, 1497 |
| TspGWI | ACGGA | 2 cut(s) | 600, 907 |
| Vha464I | CTTAAG | 2 cut(s) | 1324, 1399 |
| VspI | ATTAAT | 2 cut(s) | 1113, 1244 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1293 |
| XapI | RAATTY | 7 cut(s) | 595, 865, 1018, 1035, 1459, 1579, 1594 |
| XceI | RCATGY | 2 cut(s) | 72, 436 |
| XmiI | GTMKAC | 1 cut(s) | 928 |
| XmnI | GAANNNNTTC | 1 cut(s) | 666 |
| XspI | CTAG | 3 cut(s) | 347, 645, 1005 |
| Zsp2I | ATGCAT | 1 cut(s) | 204 |