TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 20 - 160 | 4.2e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 430 |
| AccB1I | GGYRCC | 1 cut(s) | 563 |
| AccI | GTMKAC | 1 cut(s) | 134 |
| AciI | CCGC | 1 cut(s) | 101 |
| AclWI | GGATC | 1 cut(s) | 282 |
| AcsI | RAATTY | 1 cut(s) | 72 |
| AfaI | GTAC | 4 cut(s) | 57, 183, 465, 470 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 68 |
| AflIII | ACRYGT | 2 cut(s) | 137, 377 |
| AgsI | TTSAA | 1 cut(s) | 88 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 2 cut(s) | 416, 490 |
| AluI | AGCT | 2 cut(s) | 416, 490 |
| Alw21I | GWGCWC | 3 cut(s) | 175, 477, 492 |
| Alw26I | GTCTC | 1 cut(s) | 99 |
| AlwI | GGATC | 1 cut(s) | 282 |
| AoxI | GGCC | 1 cut(s) | 456 |
| ApaI | GGGCCC | 1 cut(s) | 460 |
| ApoI | RAATTY | 1 cut(s) | 72 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 281 |
| AspS9I | GGNCC | 2 cut(s) | 456, 457 |
| AsuHPI | GGTGA | 1 cut(s) | 308 |
| BaeGI | GKGCMC | 1 cut(s) | 460 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 225, 258 |
| BanI | GGYRCC | 1 cut(s) | 563 |
| BanII | GRGCYC | 2 cut(s) | 460, 492 |
| BbsI | GAAGAC | 1 cut(s) | 391 |
| Bbv12I | GWGCWC | 3 cut(s) | 175, 477, 492 |
| BceAI | ACGGC | 2 cut(s) | 188, 493 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BcoDI | GTCTC | 1 cut(s) | 99 |
| BfmI | CTRYAG | 2 cut(s) | 437, 633 |
| BfuAI | ACCTGC | 1 cut(s) | 430 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| BmgT120I | GGNCC | 2 cut(s) | 456, 457 |
| BmiI | GGNNCC | 3 cut(s) | 457, 458, 565 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmsI | GCATC | 2 cut(s) | 422, 599 |
| BpiI | GAAGAC | 1 cut(s) | 391 |
| BsaJI | CCNNGG | 2 cut(s) | 356, 567 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 68 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 2 cut(s) | 356, 567 |
| BseGI | GGATG | 3 cut(s) | 226, 376, 556 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 68 |
| BseMII | CTCAG | 1 cut(s) | 69 |
| BseRI | GAGGAG | 1 cut(s) | 554 |
| BseSI | GKGCMC | 1 cut(s) | 460 |
| BseYI | CCCAGC | 1 cut(s) | 338 |
| BsgI | GTGCAG | 1 cut(s) | 38 |
| BshFI | GGCC | 1 cut(s) | 458 |
| BshNI | GGYRCC | 1 cut(s) | 563 |
| BsiHKAI | GWGCWC | 3 cut(s) | 175, 477, 492 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 68 |
| BsmAI | GTCTC | 1 cut(s) | 99 |
| BsnI | GGCC | 1 cut(s) | 458 |
| Bsp120I | GGGCCC | 1 cut(s) | 456 |
| Bsp1286I | GDGCHC | 4 cut(s) | 175, 460, 477, 492 |
| Bsp143I | GATC | 3 cut(s) | 287, 313, 409 |
| Bsp19I | CCATGG | 1 cut(s) | 567 |
| BspACI | CCGC | 1 cut(s) | 101 |
| BspANI | GGCC | 1 cut(s) | 458 |
| BspCNI | CTCAG | 1 cut(s) | 70 |
| BspLI | GGNNCC | 3 cut(s) | 457, 458, 565 |
| BspMAI | CTGCAG | 2 cut(s) | 441, 637 |
| BspMI | ACCTGC | 1 cut(s) | 430 |
| BspPI | GGATC | 1 cut(s) | 282 |
| BspQI | GCTCTTC | 1 cut(s) | 480 |
| BspT107I | GGYRCC | 1 cut(s) | 563 |
| BssECI | CCNNGG | 2 cut(s) | 356, 567 |
| BssMI | GATC | 3 cut(s) | 287, 313, 409 |
| BssNAI | GTATAC | 1 cut(s) | 135 |
| BssT1I | CCWWGG | 1 cut(s) | 567 |
| Bst1107I | GTATAC | 1 cut(s) | 135 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 2 cut(s) | 365, 468 |
| Bst6I | CTCTTC | 1 cut(s) | 480 |
| BstC8I | GCNNGC | 1 cut(s) | 437 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstDSI | CCRYGG | 1 cut(s) | 567 |
| BstF5I | GGATG | 3 cut(s) | 226, 376, 556 |
| BstKTI | GATC | 3 cut(s) | 290, 316, 412 |
| BstMAI | GTCTC | 1 cut(s) | 99 |
| BstMBI | GATC | 3 cut(s) | 287, 313, 409 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 170 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstNSI | RCATGY | 2 cut(s) | 141, 381 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 2 cut(s) | 437, 633 |
| BstSLI | GKGCMC | 1 cut(s) | 460 |
| BstV2I | GAAGAC | 1 cut(s) | 391 |
| BstX2I | RGATCY | 1 cut(s) | 287 |
| BstYI | RGATCY | 1 cut(s) | 287 |
| BstZ17I | GTATAC | 1 cut(s) | 135 |
| BsuRI | GGCC | 1 cut(s) | 458 |
| BtgI | CCRYGG | 1 cut(s) | 567 |
| BtsCI | GGATG | 3 cut(s) | 226, 376, 556 |
| BtsI | GCAGTG | 1 cut(s) | 349 |
| BtsIMutI | CAGTG | 1 cut(s) | 349 |
| BveI | ACCTGC | 1 cut(s) | 430 |
| Cac8I | GCNNGC | 1 cut(s) | 437 |
| Cfr13I | GGNCC | 2 cut(s) | 456, 457 |
| Csp6I | GTAC | 4 cut(s) | 56, 182, 464, 469 |
| CviAII | CATG | 4 cut(s) | 138, 378, 481, 568 |
| CviJI | RGCY | 6 cut(s) | 273, 416, 458, 490, 545, 612 |
| CviKI_1 | RGCY | 6 cut(s) | 273, 416, 458, 490, 545, 612 |
| CviQI | GTAC | 4 cut(s) | 56, 182, 464, 469 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| DpnI | GATC | 3 cut(s) | 289, 315, 411 |
| DpnII | GATC | 3 cut(s) | 287, 313, 409 |
| Eam1104I | CTCTTC | 1 cut(s) | 480 |
| EarI | CTCTTC | 1 cut(s) | 480 |
| Ecl136II | GAGCTC | 1 cut(s) | 490 |
| Eco130I | CCWWGG | 1 cut(s) | 567 |
| Eco24I | GRGCYC | 2 cut(s) | 460, 492 |
| Eco53kI | GAGCTC | 1 cut(s) | 490 |
| EcoICRI | GAGCTC | 1 cut(s) | 490 |
| EcoO109I | RGGNCCY | 1 cut(s) | 456 |
| EcoRI | GAATTC | 1 cut(s) | 72 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| EcoT14I | CCWWGG | 1 cut(s) | 567 |
| EcoT38I | GRGCYC | 2 cut(s) | 460, 492 |
| ErhI | CCWWGG | 1 cut(s) | 567 |
| FaeI | CATG | 4 cut(s) | 141, 381, 484, 571 |
| FatI | CATG | 4 cut(s) | 137, 377, 480, 567 |
| FauI | CCCGC | 1 cut(s) | 94 |
| FblI | GTMKAC | 1 cut(s) | 134 |
| FokI | GGATG | 3 cut(s) | 213, 383, 563 |
| FriOI | GRGCYC | 2 cut(s) | 460, 492 |
| GsaI | CCCAGC | 1 cut(s) | 342 |
| HaeIII | GGCC | 1 cut(s) | 458 |
| Hin1II | CATG | 4 cut(s) | 141, 381, 484, 571 |
| HinfI | GANTC | 2 cut(s) | 107, 505 |
| HphI | GGTGA | 1 cut(s) | 308 |
| Hpy166II | GTNNAC | 2 cut(s) | 135, 464 |
| Hpy188I | TCNGA | 3 cut(s) | 287, 313, 360 |
| Hpy188III | TCNNGA | 3 cut(s) | 77, 230, 368 |
| Hpy8I | GTNNAC | 2 cut(s) | 135, 464 |
| Hpy99I | CGWCG | 2 cut(s) | 407, 410 |
| HpyAV | CCTTC | 2 cut(s) | 138, 554 |
| HpyCH4III | ACNGT | 2 cut(s) | 365, 468 |
| HpyCH4V | TGCA | 4 cut(s) | 19, 40, 439, 635 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 170 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| Hsp92II | CATG | 4 cut(s) | 141, 381, 484, 571 |
| Kzo9I | GATC | 3 cut(s) | 287, 313, 409 |
| LguI | GCTCTTC | 1 cut(s) | 480 |
| LmnI | GCTCC | 1 cut(s) | 255 |
| LpnPI | CCDG | 9 cut(s) | 48, 75, 90, 243, 259, 352, 353, 425, 449 |
| LweI | GCATC | 2 cut(s) | 422, 599 |
| MaeIII | GTNAC | 1 cut(s) | 123 |
| MalI | GATC | 3 cut(s) | 289, 315, 411 |
| MboI | GATC | 3 cut(s) | 287, 313, 409 |
| MboII | GAAGA | 2 cut(s) | 391, 497 |
| MflI | RGATCY | 1 cut(s) | 287 |
| MhlI | GDGCHC | 4 cut(s) | 175, 460, 477, 492 |
| MluCI | AATT | 5 cut(s) | 72, 114, 177, 262, 303 |
| MlyI | GAGTC | 1 cut(s) | 101 |
| MmeI | TCCRAC | 1 cut(s) | 233 |
| MnlI | CCTC | 8 cut(s) | 37, 195, 247, 366, 379, 532, 535, 580 |
| MroXI | GAANNNNTTC | 1 cut(s) | 281 |
| MseI | TTAA | 1 cut(s) | 573 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 170 |
| NcoI | CCATGG | 1 cut(s) | 567 |
| NdeII | GATC | 3 cut(s) | 287, 313, 409 |
| NlaIII | CATG | 4 cut(s) | 141, 381, 484, 571 |
| NlaIV | GGNNCC | 3 cut(s) | 457, 458, 565 |
| NspI | RCATGY | 2 cut(s) | 141, 381 |
| PciI | ACATGT | 2 cut(s) | 137, 377 |
| PciSI | GCTCTTC | 1 cut(s) | 480 |
| PdmI | GAANNNNTTC | 1 cut(s) | 281 |
| PfeI | GAWTC | 1 cut(s) | 505 |
| PfoI | TCCNGGA | 1 cut(s) | 61 |
| PleI | GAGTC | 1 cut(s) | 101 |
| PpsI | GAGTC | 1 cut(s) | 101 |
| PscI | ACATGT | 2 cut(s) | 137, 377 |
| Psp124BI | GAGCTC | 1 cut(s) | 492 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspFI | CCCAGC | 1 cut(s) | 338 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 3 cut(s) | 457, 458, 565 |
| PspOMI | GGGCCC | 1 cut(s) | 456 |
| PspPI | GGNCC | 2 cut(s) | 456, 457 |
| PstI | CTGCAG | 2 cut(s) | 441, 637 |
| PsuI | RGATCY | 1 cut(s) | 287 |
| RsaI | GTAC | 4 cut(s) | 57, 183, 465, 470 |
| RsaNI | GTAC | 4 cut(s) | 56, 182, 464, 469 |
| SacI | GAGCTC | 1 cut(s) | 492 |
| SapI | GCTCTTC | 1 cut(s) | 480 |
| SaqAI | TTAA | 1 cut(s) | 573 |
| Sau3AI | GATC | 3 cut(s) | 287, 313, 409 |
| Sau96I | GGNCC | 2 cut(s) | 456, 457 |
| SbfI | CCTGCAGG | 1 cut(s) | 441 |
| SchI | GAGTC | 1 cut(s) | 101 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SdaI | CCTGCAGG | 1 cut(s) | 441 |
| SduI | GDGCHC | 4 cut(s) | 175, 460, 477, 492 |
| SfaNI | GCATC | 2 cut(s) | 422, 599 |
| SfcI | CTRYAG | 2 cut(s) | 437, 633 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 441 |
| Sse9I | AATT | 5 cut(s) | 72, 114, 177, 262, 303 |
| SsiI | CCGC | 1 cut(s) | 101 |
| SspI | AATATT | 1 cut(s) | 626 |
| SstI | GAGCTC | 1 cut(s) | 492 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| StyI | CCWWGG | 1 cut(s) | 567 |
| TaaI | ACNGT | 2 cut(s) | 365, 468 |
| TaqI | TCGA | 2 cut(s) | 110, 408 |
| TasI | AATT | 5 cut(s) | 72, 114, 177, 262, 303 |
| TatI | WGTACW | 2 cut(s) | 55, 463 |
| TfiI | GAWTC | 1 cut(s) | 505 |
| Tru1I | TTAA | 1 cut(s) | 573 |
| Tru9I | TTAA | 1 cut(s) | 573 |
| TscAI | CASTG | 1 cut(s) | 349 |
| TspDTI | ATGAA | 2 cut(s) | 518, 567 |
| TspGWI | ACGGA | 3 cut(s) | 38, 186, 206 |
| TspRI | CASTG | 1 cut(s) | 349 |
| XapI | RAATTY | 1 cut(s) | 72 |
| XceI | RCATGY | 2 cut(s) | 141, 381 |
| XmiI | GTMKAC | 1 cut(s) | 134 |
| XmnI | GAANNNNTTC | 1 cut(s) | 281 |