TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 20 - 129 | 1.4e-13 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 50 - 135 | 2.2e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 120 - 301 | 6.3e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 123 - 183 | 4.1e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 207 - 281 | 1.1e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 236 - 272 | 8.1e-06 | Leucine rich repeat |
| C-JID | PF20160 | 354 - 497 | 1.1e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1099, 1277 |
| AciI | CCGC | 4 cut(s) | 611, 1006, 1379, 1460 |
| AclWI | GGATC | 2 cut(s) | 669, 1314 |
| AcoI | YGGCCR | 3 cut(s) | 778, 897, 1161 |
| AcsI | RAATTY | 4 cut(s) | 731, 1071, 1229, 1594 |
| AcuI | CTGAAG | 4 cut(s) | 300, 705, 812, 1532 |
| AcvI | CACGTG | 1 cut(s) | 210 |
| AfaI | GTAC | 2 cut(s) | 1085, 1217 |
| AfeI | AGCGCT | 1 cut(s) | 868 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1099, 1277, 1679 |
| AflIII | ACRYGT | 2 cut(s) | 207, 209 |
| AjnI | CCWGG | 2 cut(s) | 1060, 1129 |
| AleI | CACNNNNGTG | 1 cut(s) | 1095 |
| AluBI | AGCT | 9 cut(s) | 235, 400, 448, 774, 826, 844, 975, 1123, 1495 |
| AluI | AGCT | 9 cut(s) | 235, 400, 448, 774, 826, 844, 975, 1123, 1495 |
| Alw26I | GTCTC | 1 cut(s) | 156 |
| AlwI | GGATC | 2 cut(s) | 669, 1314 |
| Ama87I | CYCGRG | 1 cut(s) | 11 |
| Aor51HI | AGCGCT | 1 cut(s) | 868 |
| AoxI | GGCC | 6 cut(s) | 424, 778, 897, 1161, 1236, 1546 |
| ApeKI | GCWGC | 3 cut(s) | 1123, 1516, 1577 |
| ApoI | RAATTY | 4 cut(s) | 731, 1071, 1229, 1594 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 583, 615 |
| AseI | ATTAAT | 1 cut(s) | 1533 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1044 |
| AspLEI | GCGC | 2 cut(s) | 869, 1640 |
| AspS9I | GGNCC | 6 cut(s) | 424, 1058, 1236, 1376, 1462, 1643 |
| AsuHPI | GGTGA | 3 cut(s) | 537, 1082, 1616 |
| AvaI | CYCGRG | 1 cut(s) | 11 |
| AvaII | GGWCC | 4 cut(s) | 1058, 1376, 1462, 1643 |
| BaeGI | GKGCMC | 1 cut(s) | 483 |
| BalI | TGGCCA | 1 cut(s) | 899 |
| BbrPI | CACGTG | 1 cut(s) | 210 |
| BbsI | GAAGAC | 3 cut(s) | 329, 711, 1098 |
| BbvI | GCAGC | 3 cut(s) | 1110, 1528, 1589 |
| BccI | CCATC | 4 cut(s) | 347, 856, 1147, 1406 |
| BceAI | ACGGC | 1 cut(s) | 1651 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1508, 1542, 1556, 1590 |
| BciT130I | CCWGG | 2 cut(s) | 1062, 1131 |
| BcoDI | GTCTC | 1 cut(s) | 156 |
| BfaI | CTAG | 2 cut(s) | 789, 1584 |
| BfmI | CTRYAG | 3 cut(s) | 877, 1116, 1264 |
| BfoI | RGCGCY | 1 cut(s) | 870 |
| BisI | GCNGC | 3 cut(s) | 1124, 1517, 1578 |
| BlsI | GCNGC | 3 cut(s) | 1125, 1518, 1579 |
| Bme1390I | CCNGG | 2 cut(s) | 1062, 1131 |
| Bme18I | GGWCC | 4 cut(s) | 1058, 1376, 1462, 1643 |
| BmeT110I | CYCGRG | 1 cut(s) | 11 |
| BmgT120I | GGNCC | 6 cut(s) | 424, 1058, 1236, 1376, 1462, 1643 |
| BmiI | GGNNCC | 1 cut(s) | 1645 |
| BmrFI | CCNGG | 2 cut(s) | 1062, 1131 |
| BmrI | ACTGGG | 3 cut(s) | 693, 1249, 1641 |
| BmsI | GCATC | 3 cut(s) | 701, 1135, 1589 |
| BmuI | ACTGGG | 3 cut(s) | 693, 1249, 1641 |
| BoxI | GACNNNNGTC | 1 cut(s) | 210 |
| BpiI | GAAGAC | 3 cut(s) | 329, 711, 1098 |
| BpuEI | CTTGAG | 1 cut(s) | 1034 |
| BsaAI | YACGTR | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 1 cut(s) | 1211 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1099, 1277, 1679 |
| Bse118I | RCCGGY | 1 cut(s) | 1163 |
| Bse1I | ACTGG | 7 cut(s) | 256, 469, 699, 1239, 1255, 1271, 1647 |
| Bse3DI | GCAATG | 3 cut(s) | 699, 995, 1222 |
| BseBI | CCWGG | 2 cut(s) | 1062, 1131 |
| BseDI | CCNNGG | 1 cut(s) | 1211 |
| BseGI | GGATG | 5 cut(s) | 536, 716, 1126, 1158, 1603 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1099, 1277, 1679 |
| BseMI | GCAATG | 3 cut(s) | 699, 995, 1222 |
| BseMII | CTCAG | 2 cut(s) | 754, 759 |
| BseNI | ACTGG | 7 cut(s) | 256, 469, 699, 1239, 1255, 1271, 1647 |
| BseRI | GAGGAG | 4 cut(s) | 245, 475, 1175, 1505 |
| BseSI | GKGCMC | 1 cut(s) | 483 |
| BseXI | GCAGC | 3 cut(s) | 1110, 1528, 1589 |
| BshFI | GGCC | 6 cut(s) | 426, 780, 899, 1163, 1238, 1548 |
| BsiHKCI | CYCGRG | 1 cut(s) | 11 |
| BsiSI | CCGG | 1 cut(s) | 1164 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1099, 1277, 1679 |
| BsmAI | GTCTC | 1 cut(s) | 156 |
| BsmI | GAATGC | 1 cut(s) | 643 |
| BsnI | GGCC | 6 cut(s) | 426, 780, 899, 1163, 1238, 1548 |
| BsoBI | CYCGRG | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 483 |
| Bsp143I | GATC | 3 cut(s) | 661, 1033, 1306 |
| BspACI | CCGC | 4 cut(s) | 611, 1006, 1379, 1460 |
| BspANI | GGCC | 6 cut(s) | 426, 780, 899, 1163, 1238, 1548 |
| BspCNI | CTCAG | 2 cut(s) | 753, 760 |
| BspLI | GGNNCC | 1 cut(s) | 1645 |
| BspMAI | CTGCAG | 1 cut(s) | 881 |
| BspPI | GGATC | 2 cut(s) | 669, 1314 |
| BsrDI | GCAATG | 3 cut(s) | 699, 995, 1222 |
| BsrFI | RCCGGY | 1 cut(s) | 1163 |
| BsrI | ACTGG | 7 cut(s) | 256, 469, 699, 1239, 1255, 1271, 1647 |
| BssAI | RCCGGY | 1 cut(s) | 1163 |
| BssECI | CCNNGG | 1 cut(s) | 1211 |
| BssMI | GATC | 3 cut(s) | 661, 1033, 1306 |
| Bst2UI | CCWGG | 2 cut(s) | 1062, 1131 |
| Bst4CI | ACNGT | 7 cut(s) | 88, 301, 543, 950, 1376, 1409, 1441 |
| BstBAI | YACGTR | 1 cut(s) | 210 |
| BstC8I | GCNNGC | 4 cut(s) | 525, 824, 871, 1165 |
| BstDEI | CTNAG | 3 cut(s) | 665, 740, 768 |
| BstDSI | CCRYGG | 1 cut(s) | 1211 |
| BstEII | GGTNACC | 1 cut(s) | 543 |
| BstF5I | GGATG | 5 cut(s) | 536, 716, 1126, 1158, 1603 |
| BstH2I | RGCGCY | 1 cut(s) | 870 |
| BstHHI | GCGC | 2 cut(s) | 869, 1640 |
| BstKTI | GATC | 3 cut(s) | 664, 1036, 1309 |
| BstMAI | GTCTC | 1 cut(s) | 156 |
| BstMBI | GATC | 3 cut(s) | 661, 1033, 1306 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1598 |
| BstNI | CCWGG | 2 cut(s) | 1062, 1131 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 210 |
| BstPI | GGTNACC | 1 cut(s) | 543 |
| BstSCI | CCNGG | 2 cut(s) | 1060, 1129 |
| BstSFI | CTRYAG | 3 cut(s) | 877, 1116, 1264 |
| BstSLI | GKGCMC | 1 cut(s) | 483 |
| BstV1I | GCAGC | 3 cut(s) | 1110, 1528, 1589 |
| BstV2I | GAAGAC | 3 cut(s) | 329, 711, 1098 |
| BstX2I | RGATCY | 1 cut(s) | 661 |
| BstYI | RGATCY | 1 cut(s) | 661 |
| BsuRI | GGCC | 6 cut(s) | 426, 780, 899, 1163, 1238, 1548 |
| BtgI | CCRYGG | 1 cut(s) | 1211 |
| BtsCI | GGATG | 5 cut(s) | 536, 716, 1126, 1158, 1603 |
| BtsI | GCAGTG | 2 cut(s) | 139, 352 |
| BtsIMutI | CAGTG | 7 cut(s) | 139, 249, 352, 706, 1246, 1278, 1654 |
| Cac8I | GCNNGC | 4 cut(s) | 525, 824, 871, 1165 |
| CfoI | GCGC | 2 cut(s) | 869, 1640 |
| Cfr10I | RCCGGY | 1 cut(s) | 1163 |
| Cfr13I | GGNCC | 6 cut(s) | 424, 1058, 1236, 1376, 1462, 1643 |
| CpoI | CGGWCCG | 2 cut(s) | 1376, 1462 |
| CseI | GACGC | 1 cut(s) | 323 |
| Csp6I | GTAC | 2 cut(s) | 1084, 1216 |
| CspI | CGGWCCG | 2 cut(s) | 1376, 1462 |
| CviAII | CATG | 4 cut(s) | 428, 555, 854, 1679 |
| CviQI | GTAC | 2 cut(s) | 1084, 1216 |
| DdeI | CTNAG | 3 cut(s) | 665, 740, 768 |
| DpnI | GATC | 3 cut(s) | 663, 1035, 1308 |
| DpnII | GATC | 3 cut(s) | 661, 1033, 1306 |
| DraI | TTTAAA | 1 cut(s) | 501 |
| EaeI | YGGCCR | 3 cut(s) | 778, 897, 1161 |
| Eco147I | AGGCCT | 1 cut(s) | 1548 |
| Eco32I | GATATC | 1 cut(s) | 1369 |
| Eco47I | GGWCC | 4 cut(s) | 1058, 1376, 1462, 1643 |
| Eco47III | AGCGCT | 1 cut(s) | 868 |
| Eco57I | CTGAAG | 4 cut(s) | 300, 705, 812, 1532 |
| Eco72I | CACGTG | 1 cut(s) | 210 |
| Eco88I | CYCGRG | 1 cut(s) | 11 |
| Eco91I | GGTNACC | 1 cut(s) | 543 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1643 |
| EcoO65I | GGTNACC | 1 cut(s) | 543 |
| EcoRII | CCWGG | 2 cut(s) | 1060, 1129 |
| EcoRV | GATATC | 1 cut(s) | 1369 |
| FaeI | CATG | 4 cut(s) | 431, 558, 857, 1682 |
| FatI | CATG | 4 cut(s) | 427, 554, 853, 1678 |
| FauI | CCCGC | 2 cut(s) | 604, 1013 |
| Fnu4HI | GCNGC | 3 cut(s) | 1124, 1517, 1578 |
| FokI | GGATG | 5 cut(s) | 543, 723, 1113, 1165, 1590 |
| Fsp4HI | GCNGC | 3 cut(s) | 1124, 1517, 1578 |
| FspBI | CTAG | 2 cut(s) | 789, 1584 |
| GlaI | GCGC | 2 cut(s) | 868, 1639 |
| GluI | GCNGC | 3 cut(s) | 1124, 1517, 1578 |
| HaeII | RGCGCY | 1 cut(s) | 870 |
| HaeIII | GGCC | 6 cut(s) | 426, 780, 899, 1163, 1238, 1548 |
| HapII | CCGG | 1 cut(s) | 1164 |
| HgaI | GACGC | 1 cut(s) | 323 |
| HhaI | GCGC | 2 cut(s) | 869, 1640 |
| Hin1II | CATG | 4 cut(s) | 431, 558, 857, 1682 |
| Hin6I | GCGC | 2 cut(s) | 867, 1638 |
| HinP1I | GCGC | 2 cut(s) | 867, 1638 |
| HincII | GTYRAC | 4 cut(s) | 55, 190, 946, 1295 |
| HindII | GTYRAC | 4 cut(s) | 55, 190, 946, 1295 |
| HindIII | AAGCTT | 3 cut(s) | 398, 446, 824 |
| HinfI | GANTC | 5 cut(s) | 112, 144, 325, 1182, 1653 |
| HpaI | GTTAAC | 2 cut(s) | 190, 946 |
| HpaII | CCGG | 1 cut(s) | 1164 |
| HphI | GGTGA | 3 cut(s) | 537, 1082, 1616 |
| Hpy166II | GTNNAC | 4 cut(s) | 55, 190, 946, 1295 |
| Hpy188I | TCNGA | 4 cut(s) | 243, 685, 831, 1366 |
| Hpy188III | TCNNGA | 5 cut(s) | 11, 26, 789, 1037, 1076 |
| Hpy8I | GTNNAC | 4 cut(s) | 55, 190, 946, 1295 |
| HpyAV | CCTTC | 4 cut(s) | 23, 930, 1212, 1559 |
| HpyCH4III | ACNGT | 7 cut(s) | 88, 301, 543, 950, 1376, 1409, 1441 |
| HpyCH4IV | ACGT | 1 cut(s) | 209 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1598 |
| HpyF3I | CTNAG | 3 cut(s) | 665, 740, 768 |
| HpySE526I | ACGT | 1 cut(s) | 209 |
| Hsp92II | CATG | 4 cut(s) | 431, 558, 857, 1682 |
| HspAI | GCGC | 2 cut(s) | 867, 1638 |
| KroI | GCCGGC | 1 cut(s) | 1163 |
| KroNI | GCCGGC | 1 cut(s) | 1165 |
| KspAI | GTTAAC | 2 cut(s) | 190, 946 |
| Kzo9I | GATC | 3 cut(s) | 661, 1033, 1306 |
| LmnI | GCTCC | 2 cut(s) | 232, 1492 |
| Lsp1109I | GCAGC | 3 cut(s) | 1110, 1528, 1589 |
| LweI | GCATC | 3 cut(s) | 701, 1135, 1589 |
| MaeI | CTAG | 2 cut(s) | 789, 1584 |
| MaeII | ACGT | 1 cut(s) | 209 |
| MaeIII | GTNAC | 5 cut(s) | 543, 599, 668, 1142, 1415 |
| MalI | GATC | 3 cut(s) | 663, 1035, 1308 |
| MboI | GATC | 3 cut(s) | 661, 1033, 1306 |
| MboII | GAAGA | 7 cut(s) | 329, 698, 711, 1098, 1312, 1462, 1493 |
| MfeI | CAATTG | 1 cut(s) | 63 |
| MflI | RGATCY | 1 cut(s) | 661 |
| MhlI | GDGCHC | 1 cut(s) | 483 |
| MlsI | TGGCCA | 1 cut(s) | 899 |
| MluNI | TGGCCA | 1 cut(s) | 899 |
| MlyI | GAGTC | 1 cut(s) | 1176 |
| Mox20I | TGGCCA | 1 cut(s) | 899 |
| MroNI | GCCGGC | 1 cut(s) | 1163 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1044 |
| MscI | TGGCCA | 1 cut(s) | 899 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1095, 1560 |
| Msp20I | TGGCCA | 1 cut(s) | 899 |
| MspA1I | CMGCKG | 1 cut(s) | 611 |
| MspI | CCGG | 1 cut(s) | 1164 |
| MspR9I | CCNGG | 2 cut(s) | 1062, 1131 |
| MunI | CAATTG | 1 cut(s) | 63 |
| Mva1269I | GAATGC | 1 cut(s) | 643 |
| MvaI | CCWGG | 2 cut(s) | 1062, 1131 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1598 |
| NaeI | GCCGGC | 1 cut(s) | 1165 |
| NdeII | GATC | 3 cut(s) | 661, 1033, 1306 |
| NgoMIV | GCCGGC | 1 cut(s) | 1163 |
| NlaIII | CATG | 4 cut(s) | 431, 558, 857, 1682 |
| NlaIV | GGNNCC | 1 cut(s) | 1645 |
| NmuCI | GTSAC | 3 cut(s) | 543, 599, 668 |
| OliI | CACNNNNGTG | 1 cut(s) | 1095 |
| PaeR7I | CTCGAG | 1 cut(s) | 11 |
| PceI | AGGCCT | 1 cut(s) | 1548 |
| PctI | GAATGC | 1 cut(s) | 643 |
| PdiI | GCCGGC | 1 cut(s) | 1165 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1044 |
| PfeI | GAWTC | 4 cut(s) | 112, 144, 325, 1653 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1099, 1277 |
| PfoI | TCCNGGA | 1 cut(s) | 1060 |
| PkrI | GCNGC | 3 cut(s) | 1125, 1518, 1579 |
| PleI | GAGTC | 1 cut(s) | 1176 |
| PmaCI | CACGTG | 1 cut(s) | 210 |
| PmlI | CACGTG | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 1176 |
| Ppu21I | YACGTR | 1 cut(s) | 210 |
| PpuMI | RGGWCCY | 1 cut(s) | 1643 |
| PshAI | GACNNNNGTC | 1 cut(s) | 210 |
| PshBI | ATTAAT | 1 cut(s) | 1533 |
| Psp5II | RGGWCCY | 1 cut(s) | 1643 |
| Psp6I | CCWGG | 2 cut(s) | 1060, 1129 |
| PspCI | CACGTG | 1 cut(s) | 210 |
| PspEI | GGTNACC | 1 cut(s) | 543 |
| PspGI | CCWGG | 2 cut(s) | 1060, 1129 |
| PspN4I | GGNNCC | 1 cut(s) | 1645 |
| PspPI | GGNCC | 6 cut(s) | 424, 1058, 1236, 1376, 1462, 1643 |
| PspPPI | RGGWCCY | 1 cut(s) | 1643 |
| PstI | CTGCAG | 1 cut(s) | 881 |
| PsuI | RGATCY | 1 cut(s) | 661 |
| RsaI | GTAC | 2 cut(s) | 1085, 1217 |
| RsaNI | GTAC | 2 cut(s) | 1084, 1216 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1095, 1560 |
| Rsr2I | CGGWCCG | 2 cut(s) | 1376, 1462 |
| RsrII | CGGWCCG | 2 cut(s) | 1376, 1462 |
| SatI | GCNGC | 3 cut(s) | 1124, 1517, 1578 |
| Sau3AI | GATC | 3 cut(s) | 661, 1033, 1306 |
| Sau96I | GGNCC | 6 cut(s) | 424, 1058, 1236, 1376, 1462, 1643 |
| SchI | GAGTC | 1 cut(s) | 1176 |
| ScrFI | CCNGG | 2 cut(s) | 1062, 1131 |
| SduI | GDGCHC | 1 cut(s) | 483 |
| SfaNI | GCATC | 3 cut(s) | 701, 1135, 1589 |
| SfcI | CTRYAG | 3 cut(s) | 877, 1116, 1264 |
| Sfr274I | CTCGAG | 1 cut(s) | 11 |
| SinI | GGWCC | 4 cut(s) | 1058, 1376, 1462, 1643 |
| SlaI | CTCGAG | 1 cut(s) | 11 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1095, 1560 |
| SmlI | CTYRAG | 2 cut(s) | 11, 1013 |
| SmoI | CTYRAG | 2 cut(s) | 11, 1013 |
| SseBI | AGGCCT | 1 cut(s) | 1548 |
| SsiI | CCGC | 4 cut(s) | 611, 1006, 1379, 1460 |
| SspMI | CTAG | 2 cut(s) | 789, 1584 |
| StuI | AGGCCT | 1 cut(s) | 1548 |
| StyD4I | CCNGG | 2 cut(s) | 1060, 1129 |
| TaaI | ACNGT | 7 cut(s) | 88, 301, 543, 950, 1376, 1409, 1441 |
| TaiI | ACGT | 1 cut(s) | 212 |
| TaqI | TCGA | 2 cut(s) | 12, 570 |
| TfiI | GAWTC | 4 cut(s) | 112, 144, 325, 1653 |
| TscAI | CASTG | 7 cut(s) | 139, 256, 352, 706, 1246, 1278, 1654 |
| TseFI | GTSAC | 3 cut(s) | 543, 599, 668 |
| TseI | GCWGC | 3 cut(s) | 1123, 1516, 1577 |
| Tsp45I | GTSAC | 3 cut(s) | 543, 599, 668 |
| TspDTI | ATGAA | 5 cut(s) | 636, 711, 873, 1083, 1211 |
| TspGWI | ACGGA | 2 cut(s) | 1200, 1454 |
| TspRI | CASTG | 7 cut(s) | 139, 256, 352, 706, 1246, 1278, 1654 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1099, 1277 |
| VpaK11BI | GGWCC | 4 cut(s) | 1058, 1376, 1462, 1643 |
| VspI | ATTAAT | 1 cut(s) | 1533 |
| XapI | RAATTY | 4 cut(s) | 731, 1071, 1229, 1594 |
| XbaI | TCTAGA | 1 cut(s) | 788 |
| XhoI | CTCGAG | 1 cut(s) | 11 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1044 |
| XspI | CTAG | 2 cut(s) | 789, 1584 |