resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 192 | 2.4e-59 | TIR domain |
| TIR_2 | PF13676 | 17 - 115 | 1.8e-14 | TIR domain |
| NB-ARC | PF00931 | 194 - 365 | 3.8e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 431 - 502 | 1.2e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 683 - 775 | 3.8e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 691 - 777 | 1.8e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 762 - 957 | 2.7e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 765 - 863 | 9e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 999 - 1140 | 1.8e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1850 |
| AatII | GACGTC | 1 cut(s) | 51 |
| Acc16I | TGCGCA | 1 cut(s) | 350 |
| Acc36I | ACCTGC | 2 cut(s) | 1521, 2698 |
| Acc65I | GGTACC | 1 cut(s) | 1580 |
| AccB1I | GGYRCC | 2 cut(s) | 1580, 3467 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1015, 2887 |
| AccI | GTMKAC | 2 cut(s) | 3331, 3402 |
| AccII | CGCG | 4 cut(s) | 232, 687, 2454, 3147 |
| AccIII | TCCGGA | 1 cut(s) | 1099 |
| AciI | CCGC | 8 cut(s) | 215, 871, 1672, 1825, 2452, 2454, 3145, 3534 |
| AclI | AACGTT | 1 cut(s) | 2819 |
| AclWI | GGATC | 9 cut(s) | 329, 342, 653, 915, 1026, 1945, 2379, 2634, 3260 |
| AcsI | RAATTY | 5 cut(s) | 510, 1780, 2085, 3157, 3569 |
| AcuI | CTGAAG | 3 cut(s) | 231, 2093, 3559 |
| AcvI | CACGTG | 1 cut(s) | 1616 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AfaI | GTAC | 8 cut(s) | 608, 1470, 1563, 1582, 1966, 2176, 2688, 3208 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1015, 1998, 2887, 3370, 3554 |
| AflII | CTTAAG | 1 cut(s) | 2638 |
| AflIII | ACRYGT | 2 cut(s) | 1308, 1446 |
| AhlI | ACTAGT | 3 cut(s) | 568, 769, 1564 |
| AjiI | CACGTC | 1 cut(s) | 904 |
| AjnI | CCWGG | 4 cut(s) | 2998, 3217, 3301, 3364 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 931, 963, 1205, 1237 |
| AleI | CACNNNNGTG | 1 cut(s) | 3073 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2138, 2170 |
| Alw21I | GWGCWC | 3 cut(s) | 1068, 1698, 2273 |
| Alw26I | GTCTC | 6 cut(s) | 135, 778, 981, 1428, 1907, 2235 |
| Alw44I | GTGCAC | 1 cut(s) | 1694 |
| AlwI | GGATC | 9 cut(s) | 329, 342, 653, 915, 1026, 1945, 2379, 2634, 3260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 705 |
| Ama87I | CYCGRG | 2 cut(s) | 1353, 3630 |
| Aor13HI | TCCGGA | 1 cut(s) | 1099 |
| AoxI | GGCC | 4 cut(s) | 709, 1647, 2218, 2251 |
| ApaLI | GTGCAC | 1 cut(s) | 1694 |
| ApeKI | GCWGC | 6 cut(s) | 107, 437, 726, 1527, 2467, 2634 |
| ApoI | RAATTY | 5 cut(s) | 510, 1780, 2085, 3157, 3569 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2819, 2851 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1491 |
| Asp718I | GGTACC | 1 cut(s) | 1580 |
| AspLEI | GCGC | 3 cut(s) | 351, 1165, 2797 |
| AspS9I | GGNCC | 4 cut(s) | 115, 709, 1179, 2499 |
| AsuC2I | CCSGG | 7 cut(s) | 179, 1518, 1916, 2217, 3527, 3631, 3632 |
| AsuHPI | GGTGA | 4 cut(s) | 1976, 2662, 3257, 3388 |
| AsuII | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| AvaI | CYCGRG | 2 cut(s) | 1353, 3630 |
| AvaII | GGWCC | 3 cut(s) | 115, 1179, 2499 |
| BaeGI | GKGCMC | 2 cut(s) | 1698, 3044 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1572, 1605 |
| BamHI | GGATCC | 1 cut(s) | 334 |
| BanI | GGYRCC | 2 cut(s) | 1580, 3467 |
| BanII | GRGCYC | 4 cut(s) | 1068, 2273, 3218, 3393 |
| BauI | CACGAG | 1 cut(s) | 488 |
| BbrPI | CACGTG | 1 cut(s) | 1616 |
| BbsI | GAAGAC | 8 cut(s) | 43, 78, 829, 1145, 2036, 2045, 2524, 3249 |
| Bbv12I | GWGCWC | 3 cut(s) | 1068, 1698, 2273 |
| BbvI | GCAGC | 6 cut(s) | 94, 424, 738, 1539, 2454, 2621 |
| BceAI | ACGGC | 1 cut(s) | 3086 |
| BciT130I | CCWGG | 4 cut(s) | 3000, 3219, 3303, 3366 |
| BciVI | GTATCC | 1 cut(s) | 3187 |
| BcnI | CCSGG | 7 cut(s) | 179, 1518, 1916, 2217, 3527, 3631, 3632 |
| BcoDI | GTCTC | 6 cut(s) | 135, 778, 981, 1428, 1907, 2235 |
| BcuI | ACTAGT | 3 cut(s) | 568, 769, 1564 |
| BfaI | CTAG | 9 cut(s) | 569, 770, 984, 1115, 1289, 1316, 1565, 3275, 3599 |
| BfmI | CTRYAG | 1 cut(s) | 649 |
| BfoI | RGCGCY | 1 cut(s) | 1166 |
| BfrI | CTTAAG | 1 cut(s) | 2638 |
| BfuAI | ACCTGC | 2 cut(s) | 1521, 2698 |
| BfuI | GTATCC | 1 cut(s) | 3187 |
| BglII | AGATCT | 1 cut(s) | 1766 |
| BisI | GCNGC | 9 cut(s) | 108, 438, 727, 872, 1528, 1825, 2468, 2635, 3145 |
| BlsI | GCNGC | 9 cut(s) | 109, 439, 728, 873, 1529, 1826, 2469, 2636, 3146 |
| Bme18I | GGWCC | 3 cut(s) | 115, 1179, 2499 |
| BmeT110I | CYCGRG | 2 cut(s) | 1353, 3630 |
| BmgBI | CACGTC | 1 cut(s) | 904 |
| BmgT120I | GGNCC | 4 cut(s) | 115, 709, 1179, 2499 |
| BmrI | ACTGGG | 1 cut(s) | 308 |
| BmsI | GCATC | 6 cut(s) | 34, 1446, 1665, 2706, 3037, 3157 |
| BmuI | ACTGGG | 1 cut(s) | 308 |
| BpiI | GAAGAC | 8 cut(s) | 43, 78, 829, 1145, 2036, 2045, 2524, 3249 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 132, 164, 1637, 1669 |
| BpmI | CTGGAG | 3 cut(s) | 611, 1883, 3156 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1035 |
| Bpu14I | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| BpuEI | CTTGAG | 3 cut(s) | 501, 1082, 1961 |
| BpuMI | CCSGG | 7 cut(s) | 179, 1518, 1916, 2217, 3527, 3631, 3632 |
| BsaAI | YACGTR | 2 cut(s) | 606, 1616 |
| BsaBI | GATNNNNATC | 1 cut(s) | 333 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| BsaWI | WCCGGW | 1 cut(s) | 1099 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3087, 3117, 3154, 3184 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1015, 1998, 2887, 3370, 3554 |
| Bse1I | ACTGG | 6 cut(s) | 9, 303, 849, 2730, 3173, 3484 |
| Bse3DI | GCAATG | 1 cut(s) | 171 |
| Bse8I | GATNNNNATC | 1 cut(s) | 333 |
| BseAI | TCCGGA | 1 cut(s) | 1099 |
| BseBI | CCWGG | 4 cut(s) | 3000, 3219, 3303, 3366 |
| BseJI | GATNNNNATC | 1 cut(s) | 333 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1015, 1998, 2887, 3370, 3554 |
| BseMI | GCAATG | 1 cut(s) | 171 |
| BseMII | CTCAG | 5 cut(s) | 527, 1197, 1635, 2941, 2978 |
| BseNI | ACTGG | 6 cut(s) | 9, 303, 849, 2730, 3173, 3484 |
| BseRI | GAGGAG | 4 cut(s) | 176, 1307, 1640, 3434 |
| BseSI | GKGCMC | 2 cut(s) | 1698, 3044 |
| BseXI | GCAGC | 6 cut(s) | 94, 424, 738, 1539, 2454, 2621 |
| BseYI | CCCAGC | 1 cut(s) | 2891 |
| BsgI | GTGCAG | 3 cut(s) | 443, 1638, 3097 |
| Bsh1236I | CGCG | 4 cut(s) | 232, 687, 2454, 3147 |
| BshFI | GGCC | 4 cut(s) | 711, 1649, 2220, 2253 |
| BshNI | GGYRCC | 2 cut(s) | 1580, 3467 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1068, 1698, 2273 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1353, 3630 |
| BsiSI | CCGG | 7 cut(s) | 179, 1100, 1517, 1916, 2217, 3526, 3631 |
| BslFI | GGGAC | 5 cut(s) | 315, 1165, 1916, 2062, 3347 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1015, 1998, 2887, 3370, 3554 |
| BsmAI | GTCTC | 6 cut(s) | 135, 778, 981, 1428, 1907, 2235 |
| BsmBI | CGTCTC | 2 cut(s) | 135, 981 |
| BsmFI | GGGAC | 5 cut(s) | 315, 1165, 1916, 2062, 3347 |
| BsmI | GAATGC | 4 cut(s) | 290, 2619, 3136, 3222 |
| BsnI | GGCC | 4 cut(s) | 711, 1649, 2220, 2253 |
| BsoBI | CYCGRG | 2 cut(s) | 1353, 3630 |
| Bsp119I | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1068, 1698, 2273, 3044, 3218, 3393 |
| Bsp13I | TCCGGA | 1 cut(s) | 1099 |
| Bsp1407I | TGTACA | 1 cut(s) | 1964 |
| Bsp19I | CCATGG | 1 cut(s) | 1009 |
| Bsp68I | TCGCGA | 1 cut(s) | 232 |
| BspACI | CCGC | 8 cut(s) | 215, 871, 1672, 1825, 2452, 2454, 3145, 3534 |
| BspANI | GGCC | 4 cut(s) | 711, 1649, 2220, 2253 |
| BspCNI | CTCAG | 5 cut(s) | 528, 1198, 1636, 2940, 2977 |
| BspEI | TCCGGA | 1 cut(s) | 1099 |
| BspFNI | CGCG | 4 cut(s) | 232, 687, 2454, 3147 |
| BspHI | TCATGA | 2 cut(s) | 129, 2511 |
| BspMAI | CTGCAG | 1 cut(s) | 653 |
| BspMI | ACCTGC | 2 cut(s) | 1521, 2698 |
| BspPI | GGATC | 9 cut(s) | 329, 342, 653, 915, 1026, 1945, 2379, 2634, 3260 |
| BspQI | GCTCTTC | 1 cut(s) | 1701 |
| BspT104I | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| BspT107I | GGYRCC | 2 cut(s) | 1580, 3467 |
| BspTI | CTTAAG | 1 cut(s) | 2638 |
| BsrDI | GCAATG | 1 cut(s) | 171 |
| BsrGI | TGTACA | 1 cut(s) | 1964 |
| BsrI | ACTGG | 6 cut(s) | 9, 303, 849, 2730, 3173, 3484 |
| BssNAI | GTATAC | 1 cut(s) | 3403 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| BssSI | CACGAG | 1 cut(s) | 488 |
| BssT1I | CCWWGG | 2 cut(s) | 561, 1009 |
| Bst1107I | GTATAC | 1 cut(s) | 3403 |
| Bst2BI | CACGAG | 1 cut(s) | 488 |
| Bst2UI | CCWGG | 4 cut(s) | 3000, 3219, 3303, 3366 |
| Bst4CI | ACNGT | 5 cut(s) | 310, 921, 1255, 2163, 2246 |
| Bst6I | CTCTTC | 1 cut(s) | 1701 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstAFI | CTTAAG | 1 cut(s) | 2638 |
| BstAUI | TGTACA | 1 cut(s) | 1964 |
| BstBAI | YACGTR | 2 cut(s) | 606, 1616 |
| BstBI | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| BstC8I | GCNNGC | 3 cut(s) | 685, 2695, 2842 |
| BstDSI | CCRYGG | 3 cut(s) | 1009, 2452, 2480 |
| BstFNI | CGCG | 4 cut(s) | 232, 687, 2454, 3147 |
| BstH2I | RGCGCY | 1 cut(s) | 1166 |
| BstHHI | GCGC | 3 cut(s) | 351, 1165, 2797 |
| BstMAI | GTCTC | 6 cut(s) | 135, 778, 981, 1428, 1907, 2235 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 248, 484, 2640, 3107, 3531 |
| BstNI | CCWGG | 4 cut(s) | 3000, 3219, 3303, 3366 |
| BstNSI | RCATGY | 4 cut(s) | 476, 1312, 1450, 2844 |
| BstSFI | CTRYAG | 1 cut(s) | 649 |
| BstSLI | GKGCMC | 2 cut(s) | 1698, 3044 |
| BstSNI | TACGTA | 1 cut(s) | 606 |
| BstUI | CGCG | 4 cut(s) | 232, 687, 2454, 3147 |
| BstV1I | GCAGC | 6 cut(s) | 94, 424, 738, 1539, 2454, 2621 |
| BstV2I | GAAGAC | 8 cut(s) | 43, 78, 829, 1145, 2036, 2045, 2524, 3249 |
| BstX2I | RGATCY | 5 cut(s) | 334, 645, 1766, 2371, 2626 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 719 |
| BstYI | RGATCY | 5 cut(s) | 334, 645, 1766, 2371, 2626 |
| BstZ17I | GTATAC | 1 cut(s) | 3403 |
| BsuI | GTATCC | 1 cut(s) | 3187 |
| BsuRI | GGCC | 4 cut(s) | 711, 1649, 2220, 2253 |
| BtgI | CCRYGG | 3 cut(s) | 1009, 2452, 2480 |
| BtrI | CACGTC | 1 cut(s) | 904 |
| BtsI | GCAGTG | 1 cut(s) | 2810 |
| BtsIMutI | CAGTG | 6 cut(s) | 90, 856, 1641, 2810, 2856, 3180 |
| BtuMI | TCGCGA | 1 cut(s) | 232 |
| BveI | ACCTGC | 2 cut(s) | 1521, 2698 |
| Cac8I | GCNNGC | 3 cut(s) | 685, 2695, 2842 |
| CaiI | CAGNNNCTG | 1 cut(s) | 705 |
| CciI | TCATGA | 2 cut(s) | 129, 2511 |
| CfoI | GCGC | 3 cut(s) | 351, 1165, 2797 |
| Cfr13I | GGNCC | 4 cut(s) | 115, 709, 1179, 2499 |
| Cfr42I | CCGCGG | 1 cut(s) | 2455 |
| Cfr9I | CCCGGG | 1 cut(s) | 3630 |
| CseI | GACGC | 1 cut(s) | 3053 |
| Csp6I | GTAC | 8 cut(s) | 607, 1469, 1562, 1581, 1965, 2175, 2687, 3207 |
| CviQI | GTAC | 8 cut(s) | 607, 1469, 1562, 1581, 1965, 2175, 2687, 3207 |
| DraI | TTTAAA | 2 cut(s) | 1087, 1137 |
| Eam1104I | CTCTTC | 1 cut(s) | 1701 |
| EarI | CTCTTC | 1 cut(s) | 1701 |
| Ecl136II | GAGCTC | 2 cut(s) | 1066, 2271 |
| Eco105I | TACGTA | 1 cut(s) | 606 |
| Eco130I | CCWWGG | 2 cut(s) | 561, 1009 |
| Eco147I | AGGCCT | 2 cut(s) | 1649, 2253 |
| Eco24I | GRGCYC | 4 cut(s) | 1068, 2273, 3218, 3393 |
| Eco32I | GATATC | 3 cut(s) | 1321, 1757, 3496 |
| Eco47I | GGWCC | 3 cut(s) | 115, 1179, 2499 |
| Eco53kI | GAGCTC | 2 cut(s) | 1066, 2271 |
| Eco57I | CTGAAG | 3 cut(s) | 231, 2093, 3559 |
| Eco72I | CACGTG | 1 cut(s) | 1616 |
| Eco88I | CYCGRG | 2 cut(s) | 1353, 3630 |
| EcoICRI | GAGCTC | 2 cut(s) | 1066, 2271 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1179 |
| EcoRI | GAATTC | 1 cut(s) | 3157 |
| EcoRII | CCWGG | 4 cut(s) | 2998, 3217, 3301, 3364 |
| EcoRV | GATATC | 3 cut(s) | 1321, 1757, 3496 |
| EcoT14I | CCWWGG | 2 cut(s) | 561, 1009 |
| EcoT22I | ATGCAT | 3 cut(s) | 290, 1461, 3030 |
| EcoT38I | GRGCYC | 4 cut(s) | 1068, 2273, 3218, 3393 |
| ErhI | CCWWGG | 2 cut(s) | 561, 1009 |
| Esp3I | CGTCTC | 2 cut(s) | 135, 981 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2601, 2633 |
| FaqI | GGGAC | 5 cut(s) | 315, 1165, 1916, 2062, 3347 |
| FauNDI | CATATG | 2 cut(s) | 43, 3248 |
| FblI | GTMKAC | 2 cut(s) | 3331, 3402 |
| Fnu4HI | GCNGC | 9 cut(s) | 108, 438, 727, 872, 1528, 1825, 2468, 2635, 3145 |
| FriOI | GRGCYC | 4 cut(s) | 1068, 2273, 3218, 3393 |
| Fsp4HI | GCNGC | 9 cut(s) | 108, 438, 727, 872, 1528, 1825, 2468, 2635, 3145 |
| FspBI | CTAG | 9 cut(s) | 569, 770, 984, 1115, 1289, 1316, 1565, 3275, 3599 |
| FspI | TGCGCA | 1 cut(s) | 350 |
| GlaI | GCGC | 3 cut(s) | 350, 1164, 2796 |
| GluI | GCNGC | 9 cut(s) | 108, 438, 727, 872, 1528, 1825, 2468, 2635, 3145 |
| GsaI | CCCAGC | 1 cut(s) | 2895 |
| GsuI | CTGGAG | 3 cut(s) | 611, 1883, 3156 |
| HaeII | RGCGCY | 1 cut(s) | 1166 |
| HaeIII | GGCC | 4 cut(s) | 711, 1649, 2220, 2253 |
| HapII | CCGG | 7 cut(s) | 179, 1100, 1517, 1916, 2217, 3526, 3631 |
| HgaI | GACGC | 1 cut(s) | 3053 |
| HhaI | GCGC | 3 cut(s) | 351, 1165, 2797 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| Hin6I | GCGC | 3 cut(s) | 349, 1163, 2795 |
| HinP1I | GCGC | 3 cut(s) | 349, 1163, 2795 |
| HincII | GTYRAC | 1 cut(s) | 2705 |
| HindII | GTYRAC | 1 cut(s) | 2705 |
| HindIII | AAGCTT | 3 cut(s) | 1276, 2560, 2714 |
| HpaII | CCGG | 7 cut(s) | 179, 1100, 1517, 1916, 2217, 3526, 3631 |
| HphI | GGTGA | 4 cut(s) | 1976, 2662, 3257, 3388 |
| Hpy99I | CGWCG | 1 cut(s) | 448 |
| HpyCH4III | ACNGT | 5 cut(s) | 310, 921, 1255, 2163, 2246 |
| HpyCH4IV | ACGT | 5 cut(s) | 48, 605, 903, 1615, 2819 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 248, 484, 2640, 3107, 3531 |
| HpySE526I | ACGT | 5 cut(s) | 48, 605, 903, 1615, 2819 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| HspAI | GCGC | 3 cut(s) | 349, 1163, 2795 |
| KflI | GGGWCCC | 1 cut(s) | 1179 |
| Kpn2I | TCCGGA | 1 cut(s) | 1099 |
| KpnI | GGTACC | 1 cut(s) | 1584 |
| KspI | CCGCGG | 1 cut(s) | 2455 |
| LguI | GCTCTTC | 1 cut(s) | 1701 |
| LmnI | GCTCC | 5 cut(s) | 1513, 2066, 2276, 3175, 3396 |
| Lsp1109I | GCAGC | 6 cut(s) | 94, 424, 738, 1539, 2454, 2621 |
| LweI | GCATC | 6 cut(s) | 34, 1446, 1665, 2706, 3037, 3157 |
| MaeI | CTAG | 9 cut(s) | 569, 770, 984, 1115, 1289, 1316, 1565, 3275, 3599 |
| MaeII | ACGT | 5 cut(s) | 48, 605, 903, 1615, 2819 |
| MaeIII | GTNAC | 6 cut(s) | 539, 1357, 1889, 2459, 2591, 2808 |
| MfeI | CAATTG | 1 cut(s) | 2202 |
| MflI | RGATCY | 5 cut(s) | 334, 645, 1766, 2371, 2626 |
| MhlI | GDGCHC | 6 cut(s) | 1068, 1698, 2273, 3044, 3218, 3393 |
| MlyI | GAGTC | 3 cut(s) | 500, 3129, 3266 |
| MmeI | TCCRAC | 8 cut(s) | 53, 553, 1055, 1810, 2116, 2265, 3171, 3571 |
| Mph1103I | ATGCAT | 3 cut(s) | 290, 1461, 3030 |
| MroI | TCCGGA | 1 cut(s) | 1099 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1491 |
| MslI | CAYNNNNRTG | 3 cut(s) | 102, 3033, 3073 |
| MspA1I | CMGCKG | 1 cut(s) | 2454 |
| MspCI | CTTAAG | 1 cut(s) | 2638 |
| MspI | CCGG | 7 cut(s) | 179, 1100, 1517, 1916, 2217, 3526, 3631 |
| MunI | CAATTG | 1 cut(s) | 2202 |
| Mva1269I | GAATGC | 4 cut(s) | 290, 2619, 3136, 3222 |
| MvaI | CCWGG | 4 cut(s) | 3000, 3219, 3303, 3366 |
| MvnI | CGCG | 4 cut(s) | 232, 687, 2454, 3147 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 248, 484, 2640, 3107, 3531 |
| NciI | CCSGG | 7 cut(s) | 179, 1518, 1916, 2217, 3527, 3631, 3632 |
| NcoI | CCATGG | 1 cut(s) | 1009 |
| NdeI | CATATG | 2 cut(s) | 43, 3248 |
| NmuCI | GTSAC | 3 cut(s) | 539, 2591, 2808 |
| NruI | TCGCGA | 1 cut(s) | 232 |
| NsbI | TGCGCA | 1 cut(s) | 350 |
| NsiI | ATGCAT | 3 cut(s) | 290, 1461, 3030 |
| NspI | RCATGY | 4 cut(s) | 476, 1312, 1450, 2844 |
| NspV | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| OliI | CACNNNNGTG | 1 cut(s) | 3073 |
| PaeI | GCATGC | 1 cut(s) | 2844 |
| PaeR7I | CTCGAG | 1 cut(s) | 1353 |
| PagI | TCATGA | 2 cut(s) | 129, 2511 |
| PceI | AGGCCT | 2 cut(s) | 1649, 2253 |
| PciI | ACATGT | 2 cut(s) | 1308, 1446 |
| PciSI | GCTCTTC | 1 cut(s) | 1701 |
| PctI | GAATGC | 4 cut(s) | 290, 2619, 3136, 3222 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1491 |
| PflFI | GACNNNGTC | 1 cut(s) | 3486 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1015, 2887 |
| PfoI | TCCNGGA | 1 cut(s) | 2998 |
| PkrI | GCNGC | 9 cut(s) | 109, 439, 728, 873, 1529, 1826, 2469, 2636, 3146 |
| PleI | GAGTC | 3 cut(s) | 499, 3128, 3265 |
| PmaCI | CACGTG | 1 cut(s) | 1616 |
| PmlI | CACGTG | 1 cut(s) | 1616 |
| PpsI | GAGTC | 3 cut(s) | 499, 3128, 3265 |
| Ppu21I | YACGTR | 2 cut(s) | 606, 1616 |
| PpuMI | RGGWCCY | 1 cut(s) | 1179 |
| PscI | ACATGT | 2 cut(s) | 1308, 1446 |
| PsiI | TTATAA | 1 cut(s) | 1850 |
| Psp124BI | GAGCTC | 2 cut(s) | 1068, 2273 |
| Psp1406I | AACGTT | 1 cut(s) | 2819 |
| Psp5II | RGGWCCY | 1 cut(s) | 1179 |
| Psp6I | CCWGG | 4 cut(s) | 2998, 3217, 3301, 3364 |
| PspCI | CACGTG | 1 cut(s) | 1616 |
| PspFI | CCCAGC | 1 cut(s) | 2891 |
| PspGI | CCWGG | 4 cut(s) | 2998, 3217, 3301, 3364 |
| PspPI | GGNCC | 4 cut(s) | 115, 709, 1179, 2499 |
| PspPPI | RGGWCCY | 1 cut(s) | 1179 |
| PspXI | VCTCGAGB | 1 cut(s) | 1353 |
| PstI | CTGCAG | 1 cut(s) | 653 |
| PstNI | CAGNNNCTG | 1 cut(s) | 705 |
| PsuI | RGATCY | 5 cut(s) | 334, 645, 1766, 2371, 2626 |
| PsyI | GACNNNGTC | 1 cut(s) | 3486 |
| RruI | TCGCGA | 1 cut(s) | 232 |
| RsaI | GTAC | 8 cut(s) | 608, 1470, 1563, 1582, 1966, 2176, 2688, 3208 |
| RsaNI | GTAC | 8 cut(s) | 607, 1469, 1562, 1581, 1965, 2175, 2687, 3207 |
| RseI | CAYNNNNRTG | 3 cut(s) | 102, 3033, 3073 |
| SacI | GAGCTC | 2 cut(s) | 1068, 2273 |
| SacII | CCGCGG | 1 cut(s) | 2455 |
| SapI | GCTCTTC | 1 cut(s) | 1701 |
| SatI | GCNGC | 9 cut(s) | 108, 438, 727, 872, 1528, 1825, 2468, 2635, 3145 |
| Sau96I | GGNCC | 4 cut(s) | 115, 709, 1179, 2499 |
| SchI | GAGTC | 3 cut(s) | 500, 3129, 3266 |
| SduI | GDGCHC | 6 cut(s) | 1068, 1698, 2273, 3044, 3218, 3393 |
| SfaNI | GCATC | 6 cut(s) | 34, 1446, 1665, 2706, 3037, 3157 |
| SfcI | CTRYAG | 1 cut(s) | 649 |
| Sfr274I | CTCGAG | 1 cut(s) | 1353 |
| Sfr303I | CCGCGG | 1 cut(s) | 2455 |
| SfuI | TTCGAA | 3 cut(s) | 1281, 1803, 2047 |
| SgrBI | CCGCGG | 1 cut(s) | 2455 |
| SinI | GGWCC | 3 cut(s) | 115, 1179, 2499 |
| SlaI | CTCGAG | 1 cut(s) | 1353 |
| SmaI | CCCGGG | 1 cut(s) | 3632 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 102, 3033, 3073 |
| SmlI | CTYRAG | 5 cut(s) | 516, 1061, 1353, 1940, 2638 |
| SmoI | CTYRAG | 5 cut(s) | 516, 1061, 1353, 1940, 2638 |
| SnaBI | TACGTA | 1 cut(s) | 606 |
| SpeI | ACTAGT | 3 cut(s) | 568, 769, 1564 |
| SphI | GCATGC | 1 cut(s) | 2844 |
| SseBI | AGGCCT | 2 cut(s) | 1649, 2253 |
| SsiI | CCGC | 8 cut(s) | 215, 871, 1672, 1825, 2452, 2454, 3145, 3534 |
| SspI | AATATT | 1 cut(s) | 525 |
| SspMI | CTAG | 9 cut(s) | 569, 770, 984, 1115, 1289, 1316, 1565, 3275, 3599 |
| SstI | GAGCTC | 2 cut(s) | 1068, 2273 |
| StuI | AGGCCT | 2 cut(s) | 1649, 2253 |
| StyI | CCWWGG | 2 cut(s) | 561, 1009 |
| TaaI | ACNGT | 5 cut(s) | 310, 921, 1255, 2163, 2246 |
| TaiI | ACGT | 5 cut(s) | 51, 608, 906, 1618, 2822 |
| TatI | WGTACW | 3 cut(s) | 1468, 1561, 1964 |
| TauI | GCSGC | 3 cut(s) | 874, 1827, 3147 |
| TscAI | CASTG | 6 cut(s) | 97, 856, 1648, 2817, 2856, 3180 |
| TseFI | GTSAC | 3 cut(s) | 539, 2591, 2808 |
| TseI | GCWGC | 6 cut(s) | 107, 437, 726, 1527, 2467, 2634 |
| Tsp45I | GTSAC | 3 cut(s) | 539, 2591, 2808 |
| TspGWI | ACGGA | 9 cut(s) | 327, 461, 494, 1767, 2404, 2469, 2538, 3383, 3419 |
| TspMI | CCCGGG | 1 cut(s) | 3630 |
| TspRI | CASTG | 6 cut(s) | 97, 856, 1648, 2817, 2856, 3180 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3486 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1015, 2887 |
| Vha464I | CTTAAG | 1 cut(s) | 2638 |
| VneI | GTGCAC | 1 cut(s) | 1694 |
| VpaK11BI | GGWCC | 3 cut(s) | 115, 1179, 2499 |
| XapI | RAATTY | 5 cut(s) | 510, 1780, 2085, 3157, 3569 |
| XbaI | TCTAGA | 1 cut(s) | 1114 |
| XceI | RCATGY | 4 cut(s) | 476, 1312, 1450, 2844 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2281, 2478, 2888 |
| XhoI | CTCGAG | 1 cut(s) | 1353 |
| XmaI | CCCGGG | 1 cut(s) | 3630 |
| XmiI | GTMKAC | 2 cut(s) | 3331, 3402 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1491 |
| XspI | CTAG | 9 cut(s) | 569, 770, 984, 1115, 1289, 1316, 1565, 3275, 3599 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| Zsp2I | ATGCAT | 3 cut(s) | 290, 1461, 3030 |