TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 196 | 2.1e-55 | TIR domain |
| TIR_2 | PF13676 | 22 - 119 | 1.2e-15 | TIR domain |
| NB-ARC | PF00931 | 218 - 370 | 3.2e-18 | NB-ARC domain |
| NACHT | PF05729 | 228 - 362 | 3.3e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 437 - 505 | 3.5e-19 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 992 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1412, 2213 |
| AccBSI | CCGCTC | 1 cut(s) | 561 |
| AccII | CGCG | 1 cut(s) | 230 |
| AccIII | TCCGGA | 1 cut(s) | 485 |
| AciI | CCGC | 2 cut(s) | 561, 1278 |
| AclWI | GGATC | 3 cut(s) | 344, 992, 1603 |
| AcoI | YGGCCR | 1 cut(s) | 474 |
| AcsI | RAATTY | 4 cut(s) | 1912, 2097, 2172, 2239 |
| AcuI | CTGAAG | 4 cut(s) | 1469, 1601, 1918, 2042 |
| AcyI | GRCGYC | 1 cut(s) | 2020 |
| AfaI | GTAC | 1 cut(s) | 565 |
| AfeI | AGCGCT | 1 cut(s) | 413 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 85, 1412, 2213 |
| AflII | CTTAAG | 1 cut(s) | 1076 |
| AjnI | CCWGG | 2 cut(s) | 201, 998 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 946, 978 |
| Alw21I | GWGCWC | 3 cut(s) | 1426, 1756, 2122 |
| Alw26I | GTCTC | 2 cut(s) | 792, 1916 |
| Alw44I | GTGCAC | 1 cut(s) | 2118 |
| AlwI | GGATC | 3 cut(s) | 344, 992, 1603 |
| Ama87I | CYCGRG | 2 cut(s) | 244, 468 |
| Aor13HI | TCCGGA | 1 cut(s) | 485 |
| Aor51HI | AGCGCT | 1 cut(s) | 413 |
| AoxI | GGCC | 5 cut(s) | 474, 1072, 1165, 1662, 1723 |
| ApaLI | GTGCAC | 1 cut(s) | 2118 |
| ApeKI | GCWGC | 3 cut(s) | 122, 458, 1836 |
| ApoI | RAATTY | 4 cut(s) | 1912, 2097, 2172, 2239 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 256, 288 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1097, 1506, 1862, 2055 |
| AspLEI | GCGC | 2 cut(s) | 232, 414 |
| AspS9I | GGNCC | 2 cut(s) | 1165, 1711 |
| AsuHPI | GGTGA | 4 cut(s) | 95, 139, 1384, 1811 |
| AsuII | TTCGAA | 1 cut(s) | 1432 |
| AvaI | CYCGRG | 2 cut(s) | 244, 468 |
| AvaII | GGWCC | 1 cut(s) | 1711 |
| BaeGI | GKGCMC | 1 cut(s) | 2122 |
| BalI | TGGCCA | 1 cut(s) | 476 |
| BanII | GRGCYC | 1 cut(s) | 1756 |
| Bbv12I | GWGCWC | 3 cut(s) | 1426, 1756, 2122 |
| BbvI | GCAGC | 3 cut(s) | 109, 445, 1848 |
| BccI | CCATC | 7 cut(s) | 372, 844, 1064, 1292, 1810, 2008, 2177 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 744, 778 |
| BciT130I | CCWGG | 2 cut(s) | 203, 1000 |
| BciVI | GTATCC | 1 cut(s) | 82 |
| BclI | TGATCA | 1 cut(s) | 745 |
| BcoDI | GTCTC | 2 cut(s) | 792, 1916 |
| BfaI | CTAG | 4 cut(s) | 128, 792, 1259, 2245 |
| BfmI | CTRYAG | 3 cut(s) | 648, 1449, 2193 |
| BfoI | RGCGCY | 1 cut(s) | 415 |
| BfrI | CTTAAG | 1 cut(s) | 1076 |
| BfuI | GTATCC | 1 cut(s) | 82 |
| BglII | AGATCT | 1 cut(s) | 823 |
| BisI | GCNGC | 3 cut(s) | 123, 459, 1837 |
| BlsI | GCNGC | 3 cut(s) | 124, 460, 1838 |
| Bme1390I | CCNGG | 2 cut(s) | 203, 1000 |
| Bme18I | GGWCC | 1 cut(s) | 1711 |
| BmeT110I | CYCGRG | 2 cut(s) | 244, 468 |
| BmgT120I | GGNCC | 2 cut(s) | 1165, 1711 |
| BmrFI | CCNGG | 2 cut(s) | 203, 1000 |
| BmsI | GCATC | 2 cut(s) | 1461, 1591 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1622 |
| Bpu14I | TTCGAA | 1 cut(s) | 1432 |
| BpuEI | CTTGAG | 3 cut(s) | 1617, 1973, 2111 |
| BsaBI | GATNNNNATC | 1 cut(s) | 348 |
| BsaHI | GRCGYC | 1 cut(s) | 2020 |
| BsaJI | CCNNGG | 2 cut(s) | 79, 999 |
| BsaWI | WCCGGW | 2 cut(s) | 374, 485 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 85, 1412, 2213 |
| Bse118I | RCCGGY | 1 cut(s) | 1558 |
| Bse3DI | GCAATG | 1 cut(s) | 841 |
| Bse8I | GATNNNNATC | 1 cut(s) | 348 |
| BseAI | TCCGGA | 1 cut(s) | 485 |
| BseBI | CCWGG | 2 cut(s) | 203, 1000 |
| BseDI | CCNNGG | 2 cut(s) | 79, 999 |
| BseJI | GATNNNNATC | 1 cut(s) | 348 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 85, 1412, 2213 |
| BseMI | GCAATG | 1 cut(s) | 841 |
| BseMII | CTCAG | 4 cut(s) | 85, 1297, 1797, 2029 |
| BseRI | GAGGAG | 2 cut(s) | 10, 13 |
| BseSI | GKGCMC | 1 cut(s) | 2122 |
| BseXI | GCAGC | 3 cut(s) | 109, 445, 1848 |
| Bsh1236I | CGCG | 1 cut(s) | 230 |
| BshFI | GGCC | 5 cut(s) | 476, 1074, 1167, 1664, 1725 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1426, 1756, 2122 |
| BsiHKCI | CYCGRG | 2 cut(s) | 244, 468 |
| BsiSI | CCGG | 3 cut(s) | 375, 486, 1559 |
| BslFI | GGGAC | 3 cut(s) | 1016, 1928, 2087 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 85, 1412, 2213 |
| BsmAI | GTCTC | 2 cut(s) | 792, 1916 |
| BsmBI | CGTCTC | 1 cut(s) | 792 |
| BsmFI | GGGAC | 3 cut(s) | 1016, 1928, 2087 |
| BsnI | GGCC | 5 cut(s) | 476, 1074, 1167, 1664, 1725 |
| BsoBI | CYCGRG | 2 cut(s) | 244, 468 |
| Bsp119I | TTCGAA | 1 cut(s) | 1432 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1426, 1756, 2122 |
| Bsp13I | TCCGGA | 1 cut(s) | 485 |
| BspACI | CCGC | 2 cut(s) | 561, 1278 |
| BspANI | GGCC | 5 cut(s) | 476, 1074, 1167, 1664, 1725 |
| BspCNI | CTCAG | 4 cut(s) | 84, 1296, 1798, 2028 |
| BspEI | TCCGGA | 1 cut(s) | 485 |
| BspFNI | CGCG | 1 cut(s) | 230 |
| BspPI | GGATC | 3 cut(s) | 344, 992, 1603 |
| BspQI | GCTCTTC | 2 cut(s) | 159, 402 |
| BspT104I | TTCGAA | 1 cut(s) | 1432 |
| BspTI | CTTAAG | 1 cut(s) | 1076 |
| BsrBI | CCGCTC | 1 cut(s) | 561 |
| BsrDI | GCAATG | 1 cut(s) | 841 |
| BsrFI | RCCGGY | 1 cut(s) | 1558 |
| BssAI | RCCGGY | 1 cut(s) | 1558 |
| BssECI | CCNNGG | 2 cut(s) | 79, 999 |
| BssNI | GRCGYC | 1 cut(s) | 2020 |
| Bst2UI | CCWGG | 2 cut(s) | 203, 1000 |
| Bst4CI | ACNGT | 2 cut(s) | 803, 2048 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 159, 402 |
| BstACI | GRCGYC | 1 cut(s) | 2020 |
| BstAFI | CTTAAG | 1 cut(s) | 1076 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1480 |
| BstBI | TTCGAA | 1 cut(s) | 1432 |
| BstC8I | GCNNGC | 2 cut(s) | 942, 1628 |
| BstDEI | CTNAG | 7 cut(s) | 71, 1283, 1622, 1806, 1989, 2015, 2024 |
| BstFNI | CGCG | 1 cut(s) | 230 |
| BstH2I | RGCGCY | 1 cut(s) | 415 |
| BstHHI | GCGC | 2 cut(s) | 232, 414 |
| BstMAI | GTCTC | 2 cut(s) | 792, 1916 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1480 |
| BstNI | CCWGG | 2 cut(s) | 203, 1000 |
| BstNSI | RCATGY | 1 cut(s) | 1344 |
| BstSCI | CCNGG | 2 cut(s) | 201, 998 |
| BstSFI | CTRYAG | 3 cut(s) | 648, 1449, 2193 |
| BstSLI | GKGCMC | 1 cut(s) | 2122 |
| BstUI | CGCG | 1 cut(s) | 230 |
| BstV1I | GCAGC | 3 cut(s) | 109, 445, 1848 |
| BstX2I | RGATCY | 2 cut(s) | 349, 823 |
| BstYI | RGATCY | 2 cut(s) | 349, 823 |
| BsuI | GTATCC | 1 cut(s) | 82 |
| BsuRI | GGCC | 5 cut(s) | 476, 1074, 1167, 1664, 1725 |
| BtsI | GCAGTG | 1 cut(s) | 2219 |
| BtsIMutI | CAGTG | 1 cut(s) | 2219 |
| Cac8I | GCNNGC | 2 cut(s) | 942, 1628 |
| CfoI | GCGC | 2 cut(s) | 232, 414 |
| Cfr10I | RCCGGY | 1 cut(s) | 1558 |
| Cfr13I | GGNCC | 2 cut(s) | 1165, 1711 |
| CseI | GACGC | 1 cut(s) | 2028 |
| Csp6I | GTAC | 1 cut(s) | 564 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1813, 1848 |
| CviQI | GTAC | 1 cut(s) | 564 |
| DdeI | CTNAG | 7 cut(s) | 71, 1283, 1622, 1806, 1989, 2015, 2024 |
| EaeI | YGGCCR | 1 cut(s) | 474 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 159, 402 |
| EarI | CTCTTC | 3 cut(s) | 40, 159, 402 |
| Ecl136II | GAGCTC | 1 cut(s) | 1754 |
| Eco147I | AGGCCT | 1 cut(s) | 1664 |
| Eco24I | GRGCYC | 1 cut(s) | 1756 |
| Eco32I | GATATC | 2 cut(s) | 1270, 1772 |
| Eco47I | GGWCC | 1 cut(s) | 1711 |
| Eco47III | AGCGCT | 1 cut(s) | 413 |
| Eco53kI | GAGCTC | 1 cut(s) | 1754 |
| Eco57I | CTGAAG | 4 cut(s) | 1469, 1601, 1918, 2042 |
| Eco88I | CYCGRG | 2 cut(s) | 244, 468 |
| EcoICRI | GAGCTC | 1 cut(s) | 1754 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1165 |
| EcoRI | GAATTC | 1 cut(s) | 2239 |
| EcoRII | CCWGG | 2 cut(s) | 201, 998 |
| EcoRV | GATATC | 2 cut(s) | 1270, 1772 |
| EcoT22I | ATGCAT | 1 cut(s) | 1476 |
| EcoT38I | GRGCYC | 1 cut(s) | 1756 |
| Esp3I | CGTCTC | 1 cut(s) | 792 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 410, 442, 813, 845 |
| FaqI | GGGAC | 3 cut(s) | 1016, 1928, 2087 |
| FauNDI | CATATG | 1 cut(s) | 58 |
| FbaI | TGATCA | 1 cut(s) | 745 |
| Fnu4HI | GCNGC | 3 cut(s) | 123, 459, 1837 |
| FriOI | GRGCYC | 1 cut(s) | 1756 |
| Fsp4HI | GCNGC | 3 cut(s) | 123, 459, 1837 |
| FspBI | CTAG | 4 cut(s) | 128, 792, 1259, 2245 |
| GlaI | GCGC | 2 cut(s) | 231, 413 |
| GluI | GCNGC | 3 cut(s) | 123, 459, 1837 |
| HaeII | RGCGCY | 1 cut(s) | 415 |
| HaeIII | GGCC | 5 cut(s) | 476, 1074, 1167, 1664, 1725 |
| HapII | CCGG | 3 cut(s) | 375, 486, 1559 |
| HgaI | GACGC | 1 cut(s) | 2028 |
| HhaI | GCGC | 2 cut(s) | 232, 414 |
| Hin1I | GRCGYC | 1 cut(s) | 2020 |
| Hin6I | GCGC | 2 cut(s) | 230, 412 |
| HinP1I | GCGC | 2 cut(s) | 230, 412 |
| HindIII | AAGCTT | 2 cut(s) | 1079, 1811 |
| HpaII | CCGG | 3 cut(s) | 375, 486, 1559 |
| HphI | GGTGA | 4 cut(s) | 95, 139, 1384, 1811 |
| Hpy166II | GTNNAC | 2 cut(s) | 1819, 2120 |
| Hpy8I | GTNNAC | 2 cut(s) | 1819, 2120 |
| Hpy99I | CGWCG | 1 cut(s) | 891 |
| HpyAV | CCTTC | 9 cut(s) | 131, 1108, 1178, 1639, 1724, 1785, 1894, 1964, 2066 |
| HpyCH4III | ACNGT | 2 cut(s) | 803, 2048 |
| HpyCH4IV | ACGT | 1 cut(s) | 1657 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1480 |
| HpyF3I | CTNAG | 7 cut(s) | 71, 1283, 1622, 1806, 1989, 2015, 2024 |
| HpySE526I | ACGT | 1 cut(s) | 1657 |
| Hsp92I | GRCGYC | 1 cut(s) | 2020 |
| HspAI | GCGC | 2 cut(s) | 230, 412 |
| Kpn2I | TCCGGA | 1 cut(s) | 485 |
| Ksp22I | TGATCA | 1 cut(s) | 745 |
| LguI | GCTCTTC | 2 cut(s) | 159, 402 |
| Lsp1109I | GCAGC | 3 cut(s) | 109, 445, 1848 |
| LweI | GCATC | 2 cut(s) | 1461, 1591 |
| MaeI | CTAG | 4 cut(s) | 128, 792, 1259, 2245 |
| MaeII | ACGT | 1 cut(s) | 1657 |
| MaeIII | GTNAC | 3 cut(s) | 1040, 1372, 1520 |
| MbiI | CCGCTC | 1 cut(s) | 561 |
| MboII | GAAGA | 8 cut(s) | 27, 30, 176, 252, 419, 1339, 1594, 1654 |
| MfeI | CAATTG | 3 cut(s) | 935, 1010, 1890 |
| MflI | RGATCY | 2 cut(s) | 349, 823 |
| MhlI | GDGCHC | 3 cut(s) | 1426, 1756, 2122 |
| MlsI | TGGCCA | 1 cut(s) | 476 |
| MluNI | TGGCCA | 1 cut(s) | 476 |
| MlyI | GAGTC | 4 cut(s) | 460, 521, 1898, 2118 |
| MmeI | TCCRAC | 5 cut(s) | 595, 760, 909, 1070, 1365 |
| Mox20I | TGGCCA | 1 cut(s) | 476 |
| Mph1103I | ATGCAT | 1 cut(s) | 1476 |
| MroI | TCCGGA | 1 cut(s) | 485 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1097, 1506, 1862, 2055 |
| MscI | TGGCCA | 1 cut(s) | 476 |
| MseI | TTAA | 7 cut(s) | 815, 842, 1077, 1218, 1695, 1748, 1883 |
| MslI | CAYNNNNRTG | 3 cut(s) | 117, 498, 585 |
| Msp20I | TGGCCA | 1 cut(s) | 476 |
| MspCI | CTTAAG | 1 cut(s) | 1076 |
| MspI | CCGG | 3 cut(s) | 375, 486, 1559 |
| MspR9I | CCNGG | 2 cut(s) | 203, 1000 |
| MunI | CAATTG | 3 cut(s) | 935, 1010, 1890 |
| MvaI | CCWGG | 2 cut(s) | 203, 1000 |
| MvnI | CGCG | 1 cut(s) | 230 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1480 |
| NdeI | CATATG | 1 cut(s) | 58 |
| NmuCI | GTSAC | 2 cut(s) | 1372, 1520 |
| NsiI | ATGCAT | 1 cut(s) | 1476 |
| NspI | RCATGY | 1 cut(s) | 1344 |
| NspV | TTCGAA | 1 cut(s) | 1432 |
| PaeR7I | CTCGAG | 2 cut(s) | 244, 468 |
| PceI | AGGCCT | 1 cut(s) | 1664 |
| PciSI | GCTCTTC | 2 cut(s) | 159, 402 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1097, 1506, 1862, 2055 |
| PfeI | GAWTC | 8 cut(s) | 225, 1287, 1429, 1537, 1585, 1863, 1963, 2087 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1412, 2213 |
| PfoI | TCCNGGA | 1 cut(s) | 201 |
| PkrI | GCNGC | 3 cut(s) | 124, 460, 1838 |
| PleI | GAGTC | 4 cut(s) | 460, 520, 1898, 2118 |
| PpsI | GAGTC | 4 cut(s) | 460, 520, 1898, 2118 |
| PsiI | TTATAA | 1 cut(s) | 992 |
| Psp124BI | GAGCTC | 1 cut(s) | 1756 |
| Psp6I | CCWGG | 2 cut(s) | 201, 998 |
| PspGI | CCWGG | 2 cut(s) | 201, 998 |
| PspPI | GGNCC | 2 cut(s) | 1165, 1711 |
| PspXI | VCTCGAGB | 1 cut(s) | 468 |
| PsuI | RGATCY | 2 cut(s) | 349, 823 |
| RsaI | GTAC | 1 cut(s) | 565 |
| RsaNI | GTAC | 1 cut(s) | 564 |
| RseI | CAYNNNNRTG | 3 cut(s) | 117, 498, 585 |
| SacI | GAGCTC | 1 cut(s) | 1756 |
| SapI | GCTCTTC | 2 cut(s) | 159, 402 |
| SaqAI | TTAA | 7 cut(s) | 815, 842, 1077, 1218, 1695, 1748, 1883 |
| SatI | GCNGC | 3 cut(s) | 123, 459, 1837 |
| Sau96I | GGNCC | 2 cut(s) | 1165, 1711 |
| SchI | GAGTC | 4 cut(s) | 460, 521, 1898, 2118 |
| ScrFI | CCNGG | 2 cut(s) | 203, 1000 |
| SduI | GDGCHC | 3 cut(s) | 1426, 1756, 2122 |
| SfaNI | GCATC | 2 cut(s) | 1461, 1591 |
| SfcI | CTRYAG | 3 cut(s) | 648, 1449, 2193 |
| Sfr274I | CTCGAG | 2 cut(s) | 244, 468 |
| SfuI | TTCGAA | 1 cut(s) | 1432 |
| SinI | GGWCC | 1 cut(s) | 1711 |
| SlaI | CTCGAG | 2 cut(s) | 244, 468 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 117, 498, 585 |
| SmlI | CTYRAG | 6 cut(s) | 244, 468, 1076, 1632, 1952, 2126 |
| SmoI | CTYRAG | 6 cut(s) | 244, 468, 1076, 1632, 1952, 2126 |
| SseBI | AGGCCT | 1 cut(s) | 1664 |
| SsiI | CCGC | 2 cut(s) | 561, 1278 |
| SspI | AATATT | 3 cut(s) | 1326, 1380, 2231 |
| SspMI | CTAG | 4 cut(s) | 128, 792, 1259, 2245 |
| SstI | GAGCTC | 1 cut(s) | 1756 |
| StuI | AGGCCT | 1 cut(s) | 1664 |
| StyD4I | CCNGG | 2 cut(s) | 201, 998 |
| TaaI | ACNGT | 2 cut(s) | 803, 2048 |
| TaiI | ACGT | 1 cut(s) | 1660 |
| TaqI | TCGA | 9 cut(s) | 245, 263, 469, 754, 1111, 1432, 1728, 1758, 2094 |
| TaqII | GACCGA | 1 cut(s) | 147 |
| TfiI | GAWTC | 8 cut(s) | 225, 1287, 1429, 1537, 1585, 1863, 1963, 2087 |
| Tru1I | TTAA | 7 cut(s) | 815, 842, 1077, 1218, 1695, 1748, 1883 |
| Tru9I | TTAA | 7 cut(s) | 815, 842, 1077, 1218, 1695, 1748, 1883 |
| TscAI | CASTG | 1 cut(s) | 2226 |
| TseFI | GTSAC | 2 cut(s) | 1372, 1520 |
| TseI | GCWGC | 3 cut(s) | 122, 458, 1836 |
| Tsp45I | GTSAC | 2 cut(s) | 1372, 1520 |
| TspRI | CASTG | 1 cut(s) | 2226 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1412, 2213 |
| Vha464I | CTTAAG | 1 cut(s) | 1076 |
| VneI | GTGCAC | 1 cut(s) | 2118 |
| VpaK11BI | GGWCC | 1 cut(s) | 1711 |
| XapI | RAATTY | 4 cut(s) | 1912, 2097, 2172, 2239 |
| XbaI | TCTAGA | 3 cut(s) | 127, 791, 1258 |
| XceI | RCATGY | 1 cut(s) | 1344 |
| XhoI | CTCGAG | 2 cut(s) | 244, 468 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1097, 1506, 1862, 2055 |
| XspI | CTAG | 4 cut(s) | 128, 792, 1259, 2245 |
| Zsp2I | ATGCAT | 1 cut(s) | 1476 |