TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 51 - 205 | 1.3e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 274 - 342 | 5.6e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 510 - 728 | 2.1e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 511 - 589 | 6.5e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 618 - 695 | 3.8e-07 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 624 - 663 | 9.2e-06 | Leucine rich repeat |
| LRR_8 | PF13855 | 629 - 684 | 5.6e-06 | Leucine rich repeat |
| C-JID | PF20160 | 793 - 931 | 4e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 380, 659, 2660 |
| AarI | CACCTGC | 1 cut(s) | 1035 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1855 |
| AatII | GACGTC | 1 cut(s) | 1077 |
| Acc36I | ACCTGC | 2 cut(s) | 1035, 1233 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1517, 2416 |
| AccI | GTMKAC | 1 cut(s) | 295 |
| AccII | CGCG | 1 cut(s) | 2712 |
| AccIII | TCCGGA | 1 cut(s) | 2124 |
| AciI | CCGC | 8 cut(s) | 160, 186, 903, 1018, 2052, 2115, 2710, 2712 |
| AclWI | GGATC | 4 cut(s) | 458, 729, 816, 939 |
| AcoI | YGGCCR | 2 cut(s) | 2011, 2193 |
| AcsI | RAATTY | 5 cut(s) | 102, 239, 777, 2360, 2388 |
| AcuI | CTGAAG | 1 cut(s) | 1128 |
| AcyI | GRCGYC | 1 cut(s) | 1074 |
| AfaI | GTAC | 5 cut(s) | 696, 742, 1542, 2335, 2402 |
| AfeI | AGCGCT | 1 cut(s) | 2164 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1231, 1517, 2027, 2416, 2645 |
| AflII | CTTAAG | 2 cut(s) | 1597, 2309 |
| AflIII | ACRYGT | 1 cut(s) | 1081 |
| AjiI | CACGTC | 1 cut(s) | 1162 |
| AjnI | CCWGG | 4 cut(s) | 1020, 1510, 2446, 2892 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 81, 113 |
| Alw26I | GTCTC | 2 cut(s) | 1347, 1678 |
| AlwI | GGATC | 4 cut(s) | 458, 729, 816, 939 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1911 |
| Ama87I | CYCGRG | 2 cut(s) | 1463, 2000 |
| Aor13HI | TCCGGA | 1 cut(s) | 2124 |
| Aor51HI | AGCGCT | 1 cut(s) | 2164 |
| AoxI | GGCC | 4 cut(s) | 342, 2011, 2193, 2544 |
| ApeKI | GCWGC | 3 cut(s) | 118, 1778, 2440 |
| ApoI | RAATTY | 5 cut(s) | 102, 239, 777, 2360, 2388 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1822, 1854 |
| AseI | ATTAAT | 2 cut(s) | 1404, 2835 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 605 |
| AspLEI | GCGC | 3 cut(s) | 2165, 2638, 2936 |
| AspS9I | GGNCC | 3 cut(s) | 2523, 2544, 2764 |
| AsuC2I | CCSGG | 2 cut(s) | 1041, 2379 |
| AsuHPI | GGTGA | 2 cut(s) | 407, 2399 |
| AvaI | CYCGRG | 2 cut(s) | 1463, 2000 |
| AvaII | GGWCC | 2 cut(s) | 2523, 2764 |
| AxyI | CCTNAGG | 1 cut(s) | 1230 |
| BalI | TGGCCA | 1 cut(s) | 2195 |
| BauI | CACGAG | 1 cut(s) | 234 |
| BbsI | GAAGAC | 6 cut(s) | 668, 976, 1077, 1568, 1944, 2415 |
| BbvI | GCAGC | 3 cut(s) | 130, 1790, 2427 |
| BccI | CCATC | 7 cut(s) | 441, 959, 1309, 2089, 2152, 2215, 2639 |
| BceAI | ACGGC | 1 cut(s) | 1849 |
| BciT130I | CCWGG | 4 cut(s) | 1022, 1512, 2448, 2894 |
| BciVI | GTATCC | 1 cut(s) | 1293 |
| BcnI | CCSGG | 2 cut(s) | 1041, 2379 |
| BcoDI | GTCTC | 2 cut(s) | 1347, 1678 |
| BfaI | CTAG | 8 cut(s) | 95, 507, 755, 812, 839, 2022, 2085, 2880 |
| BfmI | CTRYAG | 2 cut(s) | 1325, 2433 |
| BfoI | RGCGCY | 1 cut(s) | 2166 |
| BfrI | CTTAAG | 2 cut(s) | 1597, 2309 |
| BfuAI | ACCTGC | 2 cut(s) | 1035, 1233 |
| BfuI | GTATCC | 1 cut(s) | 1293 |
| BglII | AGATCT | 4 cut(s) | 814, 1601, 1612, 1969 |
| BisI | GCNGC | 5 cut(s) | 119, 1779, 2053, 2116, 2441 |
| BlsI | GCNGC | 5 cut(s) | 120, 1780, 2054, 2117, 2442 |
| BmcAI | AGTACT | 1 cut(s) | 696 |
| Bme1390I | CCNGG | 6 cut(s) | 1022, 1041, 1512, 2379, 2448, 2894 |
| Bme18I | GGWCC | 2 cut(s) | 2523, 2764 |
| BmeT110I | CYCGRG | 2 cut(s) | 1463, 2000 |
| BmgBI | CACGTC | 1 cut(s) | 1162 |
| BmgT120I | GGNCC | 3 cut(s) | 2523, 2544, 2764 |
| BmiI | GGNNCC | 5 cut(s) | 370, 1167, 1223, 2765, 2950 |
| BmrFI | CCNGG | 6 cut(s) | 1022, 1041, 1512, 2379, 2448, 2894 |
| BmrI | ACTGGG | 4 cut(s) | 707, 755, 1926, 2937 |
| BmuI | ACTGGG | 4 cut(s) | 707, 755, 1926, 2937 |
| BpiI | GAAGAC | 6 cut(s) | 668, 976, 1077, 1568, 1944, 2415 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 215, 247, 217, 249, 396, 428 |
| BpuEI | CTTGAG | 3 cut(s) | 94, 605, 2084 |
| BpuMI | CCSGG | 2 cut(s) | 1041, 2379 |
| BsaBI | GATNNNNATC | 3 cut(s) | 813, 1617, 1968 |
| BsaHI | GRCGYC | 1 cut(s) | 1074 |
| BsaJI | CCNNGG | 2 cut(s) | 1510, 2710 |
| BsaWI | WCCGGW | 1 cut(s) | 2124 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1140, 1170 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1231, 1517, 2027, 2416, 2645 |
| Bse1I | ACTGG | 7 cut(s) | 122, 702, 750, 897, 1105, 1932, 2943 |
| Bse21I | CCTNAGG | 1 cut(s) | 1230 |
| Bse3DI | GCAATG | 3 cut(s) | 1555, 1591, 2291 |
| Bse8I | GATNNNNATC | 3 cut(s) | 813, 1617, 1968 |
| BseAI | TCCGGA | 1 cut(s) | 2124 |
| BseBI | CCWGG | 4 cut(s) | 1022, 1512, 2448, 2894 |
| BseDI | CCNNGG | 2 cut(s) | 1510, 2710 |
| BseJI | GATNNNNATC | 3 cut(s) | 813, 1617, 1968 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1231, 1517, 2027, 2416, 2645 |
| BseMI | GCAATG | 3 cut(s) | 1555, 1591, 2291 |
| BseMII | CTCAG | 7 cut(s) | 315, 1006, 1331, 1400, 1918, 1987, 2531 |
| BseNI | ACTGG | 7 cut(s) | 122, 702, 750, 897, 1105, 1932, 2943 |
| BseRI | GAGGAG | 3 cut(s) | 1714, 2492, 2807 |
| BseXI | GCAGC | 3 cut(s) | 130, 1790, 2427 |
| Bsh1236I | CGCG | 1 cut(s) | 2712 |
| BshFI | GGCC | 4 cut(s) | 344, 2013, 2195, 2546 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1463, 2000 |
| BsiSI | CCGG | 4 cut(s) | 598, 1040, 2125, 2379 |
| BslFI | GGGAC | 3 cut(s) | 749, 1248, 2220 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1231, 1517, 2027, 2416, 2645 |
| BsmAI | GTCTC | 2 cut(s) | 1347, 1678 |
| BsmFI | GGGAC | 3 cut(s) | 749, 1248, 2220 |
| BsmI | GAATGC | 2 cut(s) | 605, 1882 |
| BsnI | GGCC | 4 cut(s) | 344, 2013, 2195, 2546 |
| BsoBI | CYCGRG | 2 cut(s) | 1463, 2000 |
| Bsp13I | TCCGGA | 1 cut(s) | 2124 |
| BspACI | CCGC | 8 cut(s) | 160, 186, 903, 1018, 2052, 2115, 2710, 2712 |
| BspANI | GGCC | 4 cut(s) | 344, 2013, 2195, 2546 |
| BspCNI | CTCAG | 7 cut(s) | 316, 1005, 1330, 1401, 1917, 1986, 2532 |
| BspEI | TCCGGA | 1 cut(s) | 2124 |
| BspFNI | CGCG | 1 cut(s) | 2712 |
| BspHI | TCATGA | 3 cut(s) | 361, 1006, 2962 |
| BspLI | GGNNCC | 5 cut(s) | 370, 1167, 1223, 2765, 2950 |
| BspMI | ACCTGC | 2 cut(s) | 1035, 1233 |
| BspPI | GGATC | 4 cut(s) | 458, 729, 816, 939 |
| BspQI | GCTCTTC | 1 cut(s) | 2904 |
| BspTI | CTTAAG | 2 cut(s) | 1597, 2309 |
| BsrDI | GCAATG | 3 cut(s) | 1555, 1591, 2291 |
| BsrI | ACTGG | 7 cut(s) | 122, 702, 750, 897, 1105, 1932, 2943 |
| BssECI | CCNNGG | 2 cut(s) | 1510, 2710 |
| BssNI | GRCGYC | 1 cut(s) | 1074 |
| BssSI | CACGAG | 1 cut(s) | 234 |
| Bst2BI | CACGAG | 1 cut(s) | 234 |
| Bst2UI | CCWGG | 4 cut(s) | 1022, 1512, 2448, 2894 |
| Bst4CI | ACNGT | 5 cut(s) | 740, 2246, 2333, 2416, 2434 |
| Bst6I | CTCTTC | 4 cut(s) | 754, 816, 916, 2904 |
| BstACI | GRCGYC | 1 cut(s) | 1074 |
| BstAFI | CTTAAG | 2 cut(s) | 1597, 2309 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 988 |
| BstC8I | GCNNGC | 1 cut(s) | 2890 |
| BstDSI | CCRYGG | 1 cut(s) | 2710 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1229 |
| BstFNI | CGCG | 1 cut(s) | 2712 |
| BstH2I | RGCGCY | 1 cut(s) | 2166 |
| BstHHI | GCGC | 3 cut(s) | 2165, 2638, 2936 |
| BstMAI | GTCTC | 2 cut(s) | 1347, 1678 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 988, 2894 |
| BstNI | CCWGG | 4 cut(s) | 1022, 1512, 2448, 2894 |
| BstNSI | RCATGY | 2 cut(s) | 852, 1085 |
| BstSCI | CCNGG | 6 cut(s) | 1020, 1039, 1510, 2377, 2446, 2892 |
| BstSFI | CTRYAG | 2 cut(s) | 1325, 2433 |
| BstUI | CGCG | 1 cut(s) | 2712 |
| BstV1I | GCAGC | 3 cut(s) | 130, 1790, 2427 |
| BstV2I | GAAGAC | 6 cut(s) | 668, 976, 1077, 1568, 1944, 2415 |
| BstX2I | RGATCY | 8 cut(s) | 463, 721, 808, 814, 944, 1601, 1612, 1969 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1100, 2203, 2975 |
| BstYI | RGATCY | 8 cut(s) | 463, 721, 808, 814, 944, 1601, 1612, 1969 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1230 |
| BsuI | GTATCC | 1 cut(s) | 1293 |
| BsuRI | GGCC | 4 cut(s) | 344, 2013, 2195, 2546 |
| BtgI | CCRYGG | 1 cut(s) | 2710 |
| BtgZI | GCGATG | 1 cut(s) | 2860 |
| BtrI | CACGTC | 1 cut(s) | 1162 |
| BtsI | GCAGTG | 1 cut(s) | 222 |
| BtsIMutI | CAGTG | 6 cut(s) | 222, 743, 1912, 1939, 2537, 2950 |
| BveI | ACCTGC | 2 cut(s) | 1035, 1233 |
| Cac8I | GCNNGC | 1 cut(s) | 2890 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1911 |
| CciI | TCATGA | 3 cut(s) | 361, 1006, 2962 |
| CfoI | GCGC | 3 cut(s) | 2165, 2638, 2936 |
| Cfr13I | GGNCC | 3 cut(s) | 2523, 2544, 2764 |
| Cfr42I | CCGCGG | 1 cut(s) | 2713 |
| CseI | GACGC | 2 cut(s) | 1562, 1770 |
| Csp6I | GTAC | 5 cut(s) | 695, 741, 1541, 2334, 2401 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1573, 1608 |
| CviQI | GTAC | 5 cut(s) | 695, 741, 1541, 2334, 2401 |
| DraI | TTTAAA | 1 cut(s) | 1447 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1855 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1855 |
| EaeI | YGGCCR | 2 cut(s) | 2011, 2193 |
| Eam1104I | CTCTTC | 4 cut(s) | 754, 816, 916, 2904 |
| EarI | CTCTTC | 4 cut(s) | 754, 816, 916, 2904 |
| EciI | GGCGGA | 1 cut(s) | 1007 |
| Eco47I | GGWCC | 2 cut(s) | 2523, 2764 |
| Eco47III | AGCGCT | 1 cut(s) | 2164 |
| Eco57I | CTGAAG | 1 cut(s) | 1128 |
| Eco81I | CCTNAGG | 1 cut(s) | 1230 |
| Eco88I | CYCGRG | 2 cut(s) | 1463, 2000 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1229 |
| EcoRII | CCWGG | 4 cut(s) | 1020, 1510, 2446, 2892 |
| EcoT22I | ATGCAT | 1 cut(s) | 984 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 621, 653 |
| FaqI | GGGAC | 3 cut(s) | 749, 1248, 2220 |
| FauI | CCCGC | 3 cut(s) | 179, 2705, 2717 |
| FauNDI | CATATG | 1 cut(s) | 2575 |
| FblI | GTMKAC | 1 cut(s) | 295 |
| Fnu4HI | GCNGC | 5 cut(s) | 119, 1779, 2053, 2116, 2441 |
| Fsp4HI | GCNGC | 5 cut(s) | 119, 1779, 2053, 2116, 2441 |
| FspBI | CTAG | 8 cut(s) | 95, 507, 755, 812, 839, 2022, 2085, 2880 |
| GlaI | GCGC | 3 cut(s) | 2164, 2637, 2935 |
| GluI | GCNGC | 5 cut(s) | 119, 1779, 2053, 2116, 2441 |
| HaeII | RGCGCY | 1 cut(s) | 2166 |
| HaeIII | GGCC | 4 cut(s) | 344, 2013, 2195, 2546 |
| HapII | CCGG | 4 cut(s) | 598, 1040, 2125, 2379 |
| HgaI | GACGC | 2 cut(s) | 1562, 1770 |
| HhaI | GCGC | 3 cut(s) | 2165, 2638, 2936 |
| Hin1I | GRCGYC | 1 cut(s) | 1074 |
| Hin6I | GCGC | 3 cut(s) | 2163, 2636, 2934 |
| HinP1I | GCGC | 3 cut(s) | 2163, 2636, 2934 |
| HincII | GTYRAC | 4 cut(s) | 1432, 1507, 2242, 2603 |
| HindII | GTYRAC | 4 cut(s) | 1432, 1507, 2242, 2603 |
| HindIII | AAGCTT | 3 cut(s) | 1336, 1637, 1685 |
| HpaI | GTTAAC | 1 cut(s) | 2242 |
| HpaII | CCGG | 4 cut(s) | 598, 1040, 2125, 2379 |
| HphI | GGTGA | 2 cut(s) | 407, 2399 |
| HpyAV | CCTTC | 9 cut(s) | 266, 334, 359, 368, 547, 711, 1112, 1475, 2861 |
| HpyCH4III | ACNGT | 5 cut(s) | 740, 2246, 2333, 2416, 2434 |
| HpyCH4IV | ACGT | 2 cut(s) | 1074, 1161 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 988, 2894 |
| HpySE526I | ACGT | 2 cut(s) | 1074, 1161 |
| Hsp92I | GRCGYC | 1 cut(s) | 1074 |
| HspAI | GCGC | 3 cut(s) | 2163, 2636, 2934 |
| Kpn2I | TCCGGA | 1 cut(s) | 2124 |
| KspAI | GTTAAC | 1 cut(s) | 2242 |
| KspI | CCGCGG | 1 cut(s) | 2713 |
| LguI | GCTCTTC | 1 cut(s) | 2904 |
| LmnI | GCTCC | 4 cut(s) | 368, 1171, 2380, 2794 |
| Lsp1109I | GCAGC | 3 cut(s) | 130, 1790, 2427 |
| MaeI | CTAG | 8 cut(s) | 95, 507, 755, 812, 839, 2022, 2085, 2880 |
| MaeII | ACGT | 2 cut(s) | 1074, 1161 |
| MaeIII | GTNAC | 9 cut(s) | 395, 800, 880, 1412, 1782, 1838, 1907, 2327, 2459 |
| MflI | RGATCY | 8 cut(s) | 463, 721, 808, 814, 944, 1601, 1612, 1969 |
| MlsI | TGGCCA | 1 cut(s) | 2195 |
| MluNI | TGGCCA | 1 cut(s) | 2195 |
| MlyI | GAGTC | 5 cut(s) | 1127, 1420, 2038, 2082, 2493 |
| MmeI | TCCRAC | 3 cut(s) | 79, 753, 1871 |
| Mox20I | TGGCCA | 1 cut(s) | 2195 |
| Mph1103I | ATGCAT | 1 cut(s) | 984 |
| MroI | TCCGGA | 1 cut(s) | 2124 |
| MroXI | GAANNNNTTC | 1 cut(s) | 605 |
| MscI | TGGCCA | 1 cut(s) | 2195 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1127 |
| Msp20I | TGGCCA | 1 cut(s) | 2195 |
| MspA1I | CMGCKG | 1 cut(s) | 2712 |
| MspCI | CTTAAG | 2 cut(s) | 1597, 2309 |
| MspI | CCGG | 4 cut(s) | 598, 1040, 2125, 2379 |
| MspR9I | CCNGG | 6 cut(s) | 1022, 1041, 1512, 2379, 2448, 2894 |
| Mva1269I | GAATGC | 2 cut(s) | 605, 1882 |
| MvaI | CCWGG | 4 cut(s) | 1022, 1512, 2448, 2894 |
| MvnI | CGCG | 1 cut(s) | 2712 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 988, 2894 |
| NciI | CCSGG | 2 cut(s) | 1041, 2379 |
| NdeI | CATATG | 1 cut(s) | 2575 |
| NlaIV | GGNNCC | 5 cut(s) | 370, 1167, 1223, 2765, 2950 |
| NmuCI | GTSAC | 7 cut(s) | 395, 1412, 1782, 1838, 1907, 2327, 2459 |
| NsiI | ATGCAT | 1 cut(s) | 984 |
| NspI | RCATGY | 2 cut(s) | 852, 1085 |
| PaeR7I | CTCGAG | 1 cut(s) | 1463 |
| PagI | TCATGA | 3 cut(s) | 361, 1006, 2962 |
| PaqCI | CACCTGC | 1 cut(s) | 1035 |
| PciI | ACATGT | 1 cut(s) | 1081 |
| PciSI | GCTCTTC | 1 cut(s) | 2904 |
| PctI | GAATGC | 2 cut(s) | 605, 1882 |
| PdmI | GAANNNNTTC | 1 cut(s) | 605 |
| PfeI | GAWTC | 8 cut(s) | 17, 228, 578, 1025, 1264, 1423, 1564, 1900 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1517, 2416 |
| PfoI | TCCNGGA | 1 cut(s) | 2377 |
| PkrI | GCNGC | 5 cut(s) | 120, 1780, 2054, 2117, 2442 |
| PleI | GAGTC | 5 cut(s) | 1127, 1419, 2038, 2082, 2493 |
| PpsI | GAGTC | 5 cut(s) | 1127, 1419, 2038, 2082, 2493 |
| PscI | ACATGT | 1 cut(s) | 1081 |
| PshBI | ATTAAT | 2 cut(s) | 1404, 2835 |
| PsiI | TTATAA | 3 cut(s) | 380, 659, 2660 |
| Psp6I | CCWGG | 4 cut(s) | 1020, 1510, 2446, 2892 |
| PspGI | CCWGG | 4 cut(s) | 1020, 1510, 2446, 2892 |
| PspN4I | GGNNCC | 5 cut(s) | 370, 1167, 1223, 2765, 2950 |
| PspPI | GGNCC | 3 cut(s) | 2523, 2544, 2764 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1911 |
| PsuI | RGATCY | 8 cut(s) | 463, 721, 808, 814, 944, 1601, 1612, 1969 |
| RsaI | GTAC | 5 cut(s) | 696, 742, 1542, 2335, 2402 |
| RsaNI | GTAC | 5 cut(s) | 695, 741, 1541, 2334, 2401 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1127 |
| SacII | CCGCGG | 1 cut(s) | 2713 |
| SapI | GCTCTTC | 1 cut(s) | 2904 |
| SatI | GCNGC | 5 cut(s) | 119, 1779, 2053, 2116, 2441 |
| Sau96I | GGNCC | 3 cut(s) | 2523, 2544, 2764 |
| ScaI | AGTACT | 1 cut(s) | 696 |
| SchI | GAGTC | 5 cut(s) | 1127, 1420, 2038, 2082, 2493 |
| ScrFI | CCNGG | 6 cut(s) | 1022, 1041, 1512, 2379, 2448, 2894 |
| SfcI | CTRYAG | 2 cut(s) | 1325, 2433 |
| Sfr274I | CTCGAG | 1 cut(s) | 1463 |
| Sfr303I | CCGCGG | 1 cut(s) | 2713 |
| SgrBI | CCGCGG | 1 cut(s) | 2713 |
| SinI | GGWCC | 2 cut(s) | 2523, 2764 |
| SlaI | CTCGAG | 1 cut(s) | 1463 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1127 |
| SmlI | CTYRAG | 6 cut(s) | 109, 584, 1463, 1597, 2099, 2309 |
| SmoI | CTYRAG | 6 cut(s) | 109, 584, 1463, 1597, 2099, 2309 |
| SsiI | CCGC | 8 cut(s) | 160, 186, 903, 1018, 2052, 2115, 2710, 2712 |
| SspI | AATATT | 2 cut(s) | 452, 834 |
| SspMI | CTAG | 8 cut(s) | 95, 507, 755, 812, 839, 2022, 2085, 2880 |
| StyD4I | CCNGG | 6 cut(s) | 1020, 1039, 1510, 2377, 2446, 2892 |
| TaaI | ACNGT | 5 cut(s) | 740, 2246, 2333, 2416, 2434 |
| TaiI | ACGT | 2 cut(s) | 1077, 1164 |
| TaqI | TCGA | 4 cut(s) | 1464, 2091, 2219, 2426 |
| TatI | WGTACW | 3 cut(s) | 694, 740, 1540 |
| TauI | GCSGC | 2 cut(s) | 2055, 2118 |
| TfiI | GAWTC | 8 cut(s) | 17, 228, 578, 1025, 1264, 1423, 1564, 1900 |
| TscAI | CASTG | 6 cut(s) | 222, 750, 1912, 1939, 2544, 2950 |
| TseFI | GTSAC | 7 cut(s) | 395, 1412, 1782, 1838, 1907, 2327, 2459 |
| TseI | GCWGC | 3 cut(s) | 118, 1778, 2440 |
| Tsp45I | GTSAC | 7 cut(s) | 395, 1412, 1782, 1838, 1907, 2327, 2459 |
| TspGWI | ACGGA | 3 cut(s) | 1276, 2515, 2756 |
| TspRI | CASTG | 6 cut(s) | 222, 750, 1912, 1939, 2544, 2950 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1517, 2416 |
| Vha464I | CTTAAG | 2 cut(s) | 1597, 2309 |
| VpaK11BI | GGWCC | 2 cut(s) | 2523, 2764 |
| VspI | ATTAAT | 2 cut(s) | 1404, 2835 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1229 |
| XapI | RAATTY | 5 cut(s) | 102, 239, 777, 2360, 2388 |
| XbaI | TCTAGA | 3 cut(s) | 811, 838, 2084 |
| XceI | RCATGY | 2 cut(s) | 852, 1085 |
| XhoI | CTCGAG | 1 cut(s) | 1463 |
| XmiI | GTMKAC | 1 cut(s) | 295 |
| XmnI | GAANNNNTTC | 1 cut(s) | 605 |
| XspI | CTAG | 8 cut(s) | 95, 507, 755, 812, 839, 2022, 2085, 2880 |
| ZraI | GACGTC | 1 cut(s) | 1075 |
| ZrmI | AGTACT | 1 cut(s) | 696 |
| Zsp2I | ATGCAT | 1 cut(s) | 984 |