TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 205 | 8.6e-52 | TIR domain |
| TIR_2 | PF13676 | 26 - 124 | 3.2e-16 | TIR domain |
| NB-ARC | PF00931 | 220 - 376 | 3.3e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 445 - 512 | 1e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 679 - 890 | 1.4e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 708 - 921 | 3.4e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 978 - 1123 | 4.1e-09 | C-JID domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 516 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 139, 2177 |
| AccI | GTMKAC | 1 cut(s) | 2308 |
| AccII | CGCG | 3 cut(s) | 106, 2217, 3278 |
| AccIII | TCCGGA | 2 cut(s) | 2905, 3004 |
| AciI | CCGC | 5 cut(s) | 1648, 1867, 2065, 2217, 2625 |
| AclI | AACGTT | 1 cut(s) | 2091 |
| AclWI | GGATC | 6 cut(s) | 202, 359, 372, 1938, 2706, 3015 |
| AcoI | YGGCCR | 2 cut(s) | 483, 966 |
| AcsI | RAATTY | 7 cut(s) | 1690, 1733, 1766, 1777, 1843, 1993, 2174 |
| AcuI | CTGAAG | 4 cut(s) | 423, 797, 2354, 2396 |
| AcvI | CACGTG | 1 cut(s) | 3227 |
| AdeI | CACNNNGTG | 1 cut(s) | 285 |
| AfaI | GTAC | 9 cut(s) | 734, 872, 1223, 1478, 2221, 2317, 2782, 3161, 3356 |
| AfeI | AGCGCT | 1 cut(s) | 223 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1139, 2177 |
| AflII | CTTAAG | 1 cut(s) | 2060 |
| AflIII | ACRYGT | 3 cut(s) | 820, 1027, 3276 |
| AhlI | ACTAGT | 1 cut(s) | 2383 |
| AjnI | CCWGG | 4 cut(s) | 782, 1561, 2935, 3237 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 594, 626, 2244, 2276, 2783, 2815 |
| Alw21I | GWGCWC | 3 cut(s) | 14, 1035, 2052 |
| Alw26I | GTCTC | 8 cut(s) | 457, 795, 1232, 1824, 1945, 2303, 2343, 2396 |
| Alw44I | GTGCAC | 1 cut(s) | 2048 |
| AlwI | GGATC | 6 cut(s) | 202, 359, 372, 1938, 2706, 3015 |
| Ama87I | CYCGRG | 1 cut(s) | 1386 |
| Aor13HI | TCCGGA | 2 cut(s) | 2905, 3004 |
| Aor51HI | AGCGCT | 1 cut(s) | 223 |
| AoxI | GGCC | 3 cut(s) | 483, 966, 1383 |
| ApaLI | GTGCAC | 1 cut(s) | 2048 |
| ApeKI | GCWGC | 4 cut(s) | 1572, 2888, 2998, 3252 |
| ApoI | RAATTY | 7 cut(s) | 1690, 1733, 1766, 1777, 1843, 1993, 2174 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1456, 1488, 2395, 2427 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 743, 1185, 1527 |
| AspLEI | GCGC | 3 cut(s) | 108, 224, 2217 |
| AspS9I | GGNCC | 4 cut(s) | 1384, 1760, 2029, 2908 |
| AsuC2I | CCSGG | 4 cut(s) | 209, 327, 347, 2313 |
| AsuHPI | GGTGA | 3 cut(s) | 252, 809, 1001 |
| AsuII | TTCGAA | 1 cut(s) | 2968 |
| AvaI | CYCGRG | 1 cut(s) | 1386 |
| AvaII | GGWCC | 3 cut(s) | 1760, 2029, 2908 |
| AxyI | CCTNAGG | 1 cut(s) | 1134 |
| BaeGI | GKGCMC | 1 cut(s) | 2052 |
| BalI | TGGCCA | 1 cut(s) | 485 |
| BamHI | GGATCC | 1 cut(s) | 364 |
| BanII | GRGCYC | 1 cut(s) | 3346 |
| BauI | CACGAG | 1 cut(s) | 1551 |
| BbrPI | CACGTG | 1 cut(s) | 3227 |
| BbsI | GAAGAC | 3 cut(s) | 1600, 1906, 1964 |
| Bbv12I | GWGCWC | 3 cut(s) | 14, 1035, 2052 |
| BbvI | GCAGC | 4 cut(s) | 1584, 2875, 2985, 3239 |
| BceAI | ACGGC | 1 cut(s) | 1560 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 568, 602 |
| BciT130I | CCWGG | 4 cut(s) | 784, 1563, 2937, 3239 |
| BciVI | GTATCC | 2 cut(s) | 1818, 3235 |
| BcnI | CCSGG | 4 cut(s) | 209, 327, 347, 2313 |
| BcoDI | GTCTC | 8 cut(s) | 457, 795, 1232, 1824, 1945, 2303, 2343, 2396 |
| BcuI | ACTAGT | 1 cut(s) | 2383 |
| BfaI | CTAG | 7 cut(s) | 728, 1017, 1235, 1322, 1460, 2384, 2465 |
| BfmI | CTRYAG | 1 cut(s) | 2856 |
| BfoI | RGCGCY | 1 cut(s) | 225 |
| BfrI | CTTAAG | 1 cut(s) | 2060 |
| BfuI | GTATCC | 2 cut(s) | 1818, 3235 |
| BglII | AGATCT | 4 cut(s) | 201, 1126, 1231, 2515 |
| BisI | GCNGC | 4 cut(s) | 1573, 2889, 2999, 3253 |
| BlpI | GCTNAGC | 2 cut(s) | 414, 723 |
| BlsI | GCNGC | 4 cut(s) | 1574, 2890, 3000, 3254 |
| BmcAI | AGTACT | 1 cut(s) | 3161 |
| Bme1390I | CCNGG | 8 cut(s) | 209, 327, 347, 784, 1563, 2313, 2937, 3239 |
| Bme18I | GGWCC | 3 cut(s) | 1760, 2029, 2908 |
| BmeT110I | CYCGRG | 1 cut(s) | 1386 |
| BmgT120I | GGNCC | 4 cut(s) | 1384, 1760, 2029, 2908 |
| BmiI | GGNNCC | 5 cut(s) | 324, 366, 880, 2443, 3343 |
| BmrFI | CCNGG | 8 cut(s) | 209, 327, 347, 784, 1563, 2313, 2937, 3239 |
| BmrI | ACTGGG | 1 cut(s) | 827 |
| BmuI | ACTGGG | 1 cut(s) | 827 |
| BpiI | GAAGAC | 3 cut(s) | 1600, 1906, 1964 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2966, 2998, 3061, 3093 |
| BpmI | CTGGAG | 2 cut(s) | 161, 2285 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1192, 2876, 2892 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 414, 723 |
| Bpu14I | TTCGAA | 1 cut(s) | 2968 |
| BpuEI | CTTGAG | 7 cut(s) | 103, 677, 1115, 1672, 2009, 2114, 2288 |
| BpuMI | CCSGG | 4 cut(s) | 209, 327, 347, 2313 |
| BsaAI | YACGTR | 1 cut(s) | 3227 |
| BsaJI | CCNNGG | 2 cut(s) | 207, 2486 |
| BsaWI | WCCGGW | 3 cut(s) | 2695, 2905, 3004 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2393, 2423, 2685, 2715 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1139, 2177 |
| Bse1I | ACTGG | 4 cut(s) | 144, 833, 1691, 1908 |
| Bse21I | CCTNAGG | 1 cut(s) | 1134 |
| Bse3DI | GCAATG | 2 cut(s) | 584, 2040 |
| BseAI | TCCGGA | 2 cut(s) | 2905, 3004 |
| BseBI | CCWGG | 4 cut(s) | 784, 1563, 2937, 3239 |
| BseDI | CCNNGG | 2 cut(s) | 207, 2486 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1139, 2177 |
| BseMI | GCAATG | 2 cut(s) | 584, 2040 |
| BseMII | CTCAG | 9 cut(s) | 189, 756, 1125, 1807, 2220, 2906, 2964, 3173, 3441 |
| BseNI | ACTGG | 4 cut(s) | 144, 833, 1691, 1908 |
| BseRI | GAGGAG | 3 cut(s) | 16, 48, 3463 |
| BseSI | GKGCMC | 1 cut(s) | 2052 |
| BseXI | GCAGC | 4 cut(s) | 1584, 2875, 2985, 3239 |
| BseYI | CCCAGC | 1 cut(s) | 108 |
| Bsh1236I | CGCG | 3 cut(s) | 106, 2217, 3278 |
| Bsh1285I | CGRYCG | 1 cut(s) | 178 |
| BshFI | GGCC | 3 cut(s) | 485, 968, 1385 |
| BsiEI | CGRYCG | 1 cut(s) | 178 |
| BsiHKAI | GWGCWC | 3 cut(s) | 14, 1035, 2052 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1386 |
| BsiSI | CCGG | 8 cut(s) | 209, 327, 347, 969, 2312, 2696, 2906, 3005 |
| BslFI | GGGAC | 1 cut(s) | 1271 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1139, 2177 |
| BsmAI | GTCTC | 8 cut(s) | 457, 795, 1232, 1824, 1945, 2303, 2343, 2396 |
| BsmFI | GGGAC | 1 cut(s) | 1271 |
| BsmI | GAATGC | 3 cut(s) | 1358, 1703, 2369 |
| BsnI | GGCC | 3 cut(s) | 485, 968, 1385 |
| BsoBI | CYCGRG | 1 cut(s) | 1386 |
| Bsp119I | TTCGAA | 1 cut(s) | 2968 |
| Bsp1286I | GDGCHC | 4 cut(s) | 14, 1035, 2052, 3346 |
| Bsp13I | TCCGGA | 2 cut(s) | 2905, 3004 |
| Bsp1407I | TGTACA | 2 cut(s) | 1221, 1476 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 414, 723 |
| BspACI | CCGC | 5 cut(s) | 1648, 1867, 2065, 2217, 2625 |
| BspANI | GGCC | 3 cut(s) | 485, 968, 1385 |
| BspCNI | CTCAG | 9 cut(s) | 190, 757, 1126, 1806, 2221, 2905, 2963, 3174, 3440 |
| BspEI | TCCGGA | 2 cut(s) | 2905, 3004 |
| BspFNI | CGCG | 3 cut(s) | 106, 2217, 3278 |
| BspHI | TCATGA | 1 cut(s) | 3399 |
| BspLI | GGNNCC | 5 cut(s) | 324, 366, 880, 2443, 3343 |
| BspPI | GGATC | 6 cut(s) | 202, 359, 372, 1938, 2706, 3015 |
| BspQI | GCTCTTC | 1 cut(s) | 1551 |
| BspT104I | TTCGAA | 1 cut(s) | 2968 |
| BspTI | CTTAAG | 1 cut(s) | 2060 |
| BsrDI | GCAATG | 2 cut(s) | 584, 2040 |
| BsrGI | TGTACA | 2 cut(s) | 1221, 1476 |
| BsrI | ACTGG | 4 cut(s) | 144, 833, 1691, 1908 |
| BssECI | CCNNGG | 2 cut(s) | 207, 2486 |
| BssNAI | GTATAC | 1 cut(s) | 2309 |
| BssSI | CACGAG | 1 cut(s) | 1551 |
| BssT1I | CCWWGG | 1 cut(s) | 2486 |
| Bst1107I | GTATAC | 1 cut(s) | 2309 |
| Bst2BI | CACGAG | 1 cut(s) | 1551 |
| Bst2UI | CCWGG | 4 cut(s) | 784, 1563, 2937, 3239 |
| Bst4CI | ACNGT | 6 cut(s) | 797, 1085, 2421, 2499, 2992, 3085 |
| Bst6I | CTCTTC | 7 cut(s) | 545, 1551, 1665, 1827, 2340, 2625, 3326 |
| BstAFI | CTTAAG | 1 cut(s) | 2060 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2637 |
| BstAUI | TGTACA | 2 cut(s) | 1221, 1476 |
| BstBAI | YACGTR | 1 cut(s) | 3227 |
| BstBI | TTCGAA | 1 cut(s) | 2968 |
| BstC8I | GCNNGC | 4 cut(s) | 300, 2199, 2213, 2629 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1137 |
| BstFNI | CGCG | 3 cut(s) | 106, 2217, 3278 |
| BstH2I | RGCGCY | 1 cut(s) | 225 |
| BstHHI | GCGC | 3 cut(s) | 108, 224, 2217 |
| BstMAI | GTCTC | 8 cut(s) | 457, 795, 1232, 1824, 1945, 2303, 2343, 2396 |
| BstMCI | CGRYCG | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1072, 2476, 2637 |
| BstNI | CCWGG | 4 cut(s) | 784, 1563, 2937, 3239 |
| BstNSI | RCATGY | 4 cut(s) | 470, 824, 1833, 2215 |
| BstSCI | CCNGG | 8 cut(s) | 207, 325, 345, 782, 1561, 2311, 2935, 3237 |
| BstSFI | CTRYAG | 1 cut(s) | 2856 |
| BstSLI | GKGCMC | 1 cut(s) | 2052 |
| BstUI | CGCG | 3 cut(s) | 106, 2217, 3278 |
| BstV1I | GCAGC | 4 cut(s) | 1584, 2875, 2985, 3239 |
| BstV2I | GAAGAC | 3 cut(s) | 1600, 1906, 1964 |
| BstX2I | RGATCY | 8 cut(s) | 194, 201, 364, 1126, 1231, 1930, 2515, 2698 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 451 |
| BstYI | RGATCY | 8 cut(s) | 194, 201, 364, 1126, 1231, 1930, 2515, 2698 |
| BstZ17I | GTATAC | 1 cut(s) | 2309 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1134 |
| BsuI | GTATCC | 2 cut(s) | 1818, 3235 |
| BsuRI | GGCC | 3 cut(s) | 485, 968, 1385 |
| BtsI | GCAGTG | 1 cut(s) | 2052 |
| BtsIMutI | CAGTG | 2 cut(s) | 2052, 3081 |
| Cac8I | GCNNGC | 4 cut(s) | 300, 2199, 2213, 2629 |
| CciI | TCATGA | 1 cut(s) | 3399 |
| CfoI | GCGC | 3 cut(s) | 108, 224, 2217 |
| Cfr13I | GGNCC | 4 cut(s) | 1384, 1760, 2029, 2908 |
| CseI | GACGC | 2 cut(s) | 3158, 3284 |
| Csp6I | GTAC | 9 cut(s) | 733, 871, 1222, 1477, 2220, 2316, 2781, 3160, 3355 |
| CviQI | GTAC | 9 cut(s) | 733, 871, 1222, 1477, 2220, 2316, 2781, 3160, 3355 |
| DraI | TTTAAA | 1 cut(s) | 2329 |
| DraIII | CACNNNGTG | 1 cut(s) | 285 |
| EaeI | YGGCCR | 2 cut(s) | 483, 966 |
| Eam1104I | CTCTTC | 7 cut(s) | 545, 1551, 1665, 1827, 2340, 2625, 3326 |
| EarI | CTCTTC | 7 cut(s) | 545, 1551, 1665, 1827, 2340, 2625, 3326 |
| Eco130I | CCWWGG | 1 cut(s) | 2486 |
| Eco24I | GRGCYC | 1 cut(s) | 3346 |
| Eco47I | GGWCC | 3 cut(s) | 1760, 2029, 2908 |
| Eco47III | AGCGCT | 1 cut(s) | 223 |
| Eco57I | CTGAAG | 4 cut(s) | 423, 797, 2354, 2396 |
| Eco72I | CACGTG | 1 cut(s) | 3227 |
| Eco81I | CCTNAGG | 1 cut(s) | 1134 |
| Eco88I | CYCGRG | 1 cut(s) | 1386 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1137 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1760 |
| EcoRII | CCWGG | 4 cut(s) | 782, 1561, 2935, 3237 |
| EcoT14I | CCWWGG | 1 cut(s) | 2486 |
| EcoT22I | ATGCAT | 1 cut(s) | 1497 |
| EcoT38I | GRGCYC | 1 cut(s) | 3346 |
| ErhI | CCWWGG | 1 cut(s) | 2486 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 867, 899, 3241, 3273 |
| FaqI | GGGAC | 1 cut(s) | 1271 |
| FauI | CCCGC | 1 cut(s) | 2632 |
| FauNDI | CATATG | 1 cut(s) | 3189 |
| FblI | GTMKAC | 1 cut(s) | 2308 |
| Fnu4HI | GCNGC | 4 cut(s) | 1573, 2889, 2999, 3253 |
| FriOI | GRGCYC | 1 cut(s) | 3346 |
| Fsp4HI | GCNGC | 4 cut(s) | 1573, 2889, 2999, 3253 |
| FspBI | CTAG | 7 cut(s) | 728, 1017, 1235, 1322, 1460, 2384, 2465 |
| GlaI | GCGC | 3 cut(s) | 107, 223, 2216 |
| GluI | GCNGC | 4 cut(s) | 1573, 2889, 2999, 3253 |
| GsaI | CCCAGC | 1 cut(s) | 112 |
| GsuI | CTGGAG | 2 cut(s) | 161, 2285 |
| HaeII | RGCGCY | 1 cut(s) | 225 |
| HaeIII | GGCC | 3 cut(s) | 485, 968, 1385 |
| HapII | CCGG | 8 cut(s) | 209, 327, 347, 969, 2312, 2696, 2906, 3005 |
| HgaI | GACGC | 2 cut(s) | 3158, 3284 |
| HhaI | GCGC | 3 cut(s) | 108, 224, 2217 |
| Hin6I | GCGC | 3 cut(s) | 106, 222, 2215 |
| HinP1I | GCGC | 3 cut(s) | 106, 222, 2215 |
| HincII | GTYRAC | 1 cut(s) | 1877 |
| HindII | GTYRAC | 1 cut(s) | 1877 |
| HindIII | AAGCTT | 1 cut(s) | 2435 |
| HpaII | CCGG | 8 cut(s) | 209, 327, 347, 969, 2312, 2696, 2906, 3005 |
| HphI | GGTGA | 3 cut(s) | 252, 809, 1001 |
| Hpy166II | GTNNAC | 5 cut(s) | 524, 733, 1877, 2050, 2309 |
| Hpy8I | GTNNAC | 5 cut(s) | 524, 733, 1877, 2050, 2309 |
| Hpy99I | CGWCG | 3 cut(s) | 77, 377, 3278 |
| HpyCH4III | ACNGT | 6 cut(s) | 797, 1085, 2421, 2499, 2992, 3085 |
| HpyCH4IV | ACGT | 8 cut(s) | 75, 375, 526, 571, 1027, 2091, 3226, 3263 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1072, 2476, 2637 |
| HpySE526I | ACGT | 8 cut(s) | 75, 375, 526, 571, 1027, 2091, 3226, 3263 |
| HspAI | GCGC | 3 cut(s) | 106, 222, 2215 |
| Kpn2I | TCCGGA | 2 cut(s) | 2905, 3004 |
| LguI | GCTCTTC | 1 cut(s) | 1551 |
| LmnI | GCTCC | 5 cut(s) | 211, 996, 2447, 2995, 3341 |
| Lsp1109I | GCAGC | 4 cut(s) | 1584, 2875, 2985, 3239 |
| MaeI | CTAG | 7 cut(s) | 728, 1017, 1235, 1322, 1460, 2384, 2465 |
| MaeII | ACGT | 8 cut(s) | 75, 375, 526, 571, 1027, 2091, 3226, 3263 |
| MaeIII | GTNAC | 5 cut(s) | 434, 947, 1009, 1412, 1462 |
| MfeI | CAATTG | 1 cut(s) | 2247 |
| MflI | RGATCY | 8 cut(s) | 194, 201, 364, 1126, 1231, 1930, 2515, 2698 |
| MhlI | GDGCHC | 4 cut(s) | 14, 1035, 2052, 3346 |
| MlsI | TGGCCA | 1 cut(s) | 485 |
| MluI | ACGCGT | 1 cut(s) | 3276 |
| MluNI | TGGCCA | 1 cut(s) | 485 |
| MlyI | GAGTC | 3 cut(s) | 2470, 3304, 3419 |
| MmeI | TCCRAC | 5 cut(s) | 44, 396, 592, 1189, 3281 |
| Mox20I | TGGCCA | 1 cut(s) | 485 |
| Mph1103I | ATGCAT | 1 cut(s) | 1497 |
| MroI | TCCGGA | 2 cut(s) | 2905, 3004 |
| MroXI | GAANNNNTTC | 3 cut(s) | 743, 1185, 1527 |
| MscI | TGGCCA | 1 cut(s) | 485 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1590, 1921, 1976, 2045, 3144 |
| Msp20I | TGGCCA | 1 cut(s) | 485 |
| MspCI | CTTAAG | 1 cut(s) | 2060 |
| MspI | CCGG | 8 cut(s) | 209, 327, 347, 969, 2312, 2696, 2906, 3005 |
| MspR9I | CCNGG | 8 cut(s) | 209, 327, 347, 784, 1563, 2313, 2937, 3239 |
| MunI | CAATTG | 1 cut(s) | 2247 |
| Mva1269I | GAATGC | 3 cut(s) | 1358, 1703, 2369 |
| MvaI | CCWGG | 4 cut(s) | 784, 1563, 2937, 3239 |
| MvnI | CGCG | 3 cut(s) | 106, 2217, 3278 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1072, 2476, 2637 |
| NciI | CCSGG | 4 cut(s) | 209, 327, 347, 2313 |
| NdeI | CATATG | 1 cut(s) | 3189 |
| NlaIV | GGNNCC | 5 cut(s) | 324, 366, 880, 2443, 3343 |
| NmuCI | GTSAC | 4 cut(s) | 434, 947, 1412, 1462 |
| NsiI | ATGCAT | 1 cut(s) | 1497 |
| NspI | RCATGY | 4 cut(s) | 470, 824, 1833, 2215 |
| NspV | TTCGAA | 1 cut(s) | 2968 |
| PaeI | GCATGC | 1 cut(s) | 2215 |
| PagI | TCATGA | 1 cut(s) | 3399 |
| PciI | ACATGT | 1 cut(s) | 820 |
| PciSI | GCTCTTC | 1 cut(s) | 1551 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3304 |
| PctI | GAATGC | 3 cut(s) | 1358, 1703, 2369 |
| PdmI | GAANNNNTTC | 3 cut(s) | 743, 1185, 1527 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 139, 2177 |
| PfoI | TCCNGGA | 2 cut(s) | 2935, 3237 |
| PkrI | GCNGC | 4 cut(s) | 1574, 2890, 3000, 3254 |
| Ple19I | CGATCG | 1 cut(s) | 178 |
| PleI | GAGTC | 3 cut(s) | 2469, 3303, 3419 |
| PmaCI | CACGTG | 1 cut(s) | 3227 |
| PmlI | CACGTG | 1 cut(s) | 3227 |
| PpsI | GAGTC | 3 cut(s) | 2469, 3303, 3419 |
| Ppu21I | YACGTR | 1 cut(s) | 3227 |
| PpuMI | RGGWCCY | 1 cut(s) | 1760 |
| PscI | ACATGT | 1 cut(s) | 820 |
| PsiI | TTATAA | 1 cut(s) | 516 |
| Psp1406I | AACGTT | 1 cut(s) | 2091 |
| Psp5II | RGGWCCY | 1 cut(s) | 1760 |
| Psp6I | CCWGG | 4 cut(s) | 782, 1561, 2935, 3237 |
| PspCI | CACGTG | 1 cut(s) | 3227 |
| PspFI | CCCAGC | 1 cut(s) | 108 |
| PspGI | CCWGG | 4 cut(s) | 782, 1561, 2935, 3237 |
| PspN4I | GGNNCC | 5 cut(s) | 324, 366, 880, 2443, 3343 |
| PspPI | GGNCC | 4 cut(s) | 1384, 1760, 2029, 2908 |
| PspPPI | RGGWCCY | 1 cut(s) | 1760 |
| PsuI | RGATCY | 8 cut(s) | 194, 201, 364, 1126, 1231, 1930, 2515, 2698 |
| PvuI | CGATCG | 1 cut(s) | 178 |
| RsaI | GTAC | 9 cut(s) | 734, 872, 1223, 1478, 2221, 2317, 2782, 3161, 3356 |
| RsaNI | GTAC | 9 cut(s) | 733, 871, 1222, 1477, 2220, 2316, 2781, 3160, 3355 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1590, 1921, 1976, 2045, 3144 |
| SapI | GCTCTTC | 1 cut(s) | 1551 |
| SatI | GCNGC | 4 cut(s) | 1573, 2889, 2999, 3253 |
| Sau96I | GGNCC | 4 cut(s) | 1384, 1760, 2029, 2908 |
| ScaI | AGTACT | 1 cut(s) | 3161 |
| SchI | GAGTC | 3 cut(s) | 2470, 3304, 3419 |
| ScrFI | CCNGG | 8 cut(s) | 209, 327, 347, 784, 1563, 2313, 2937, 3239 |
| SduI | GDGCHC | 4 cut(s) | 14, 1035, 2052, 3346 |
| SfcI | CTRYAG | 1 cut(s) | 2856 |
| SfuI | TTCGAA | 1 cut(s) | 2968 |
| SinI | GGWCC | 3 cut(s) | 1760, 2029, 2908 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1590, 1921, 1976, 2045, 3144 |
| SmlI | CTYRAG | 8 cut(s) | 82, 656, 1094, 1651, 1988, 2060, 2129, 2267 |
| SmoI | CTYRAG | 8 cut(s) | 82, 656, 1094, 1651, 1988, 2060, 2129, 2267 |
| SpeI | ACTAGT | 1 cut(s) | 2383 |
| SphI | GCATGC | 1 cut(s) | 2215 |
| SsiI | CCGC | 5 cut(s) | 1648, 1867, 2065, 2217, 2625 |
| SspI | AATATT | 1 cut(s) | 1949 |
| SspMI | CTAG | 7 cut(s) | 728, 1017, 1235, 1322, 1460, 2384, 2465 |
| StyD4I | CCNGG | 8 cut(s) | 207, 325, 345, 782, 1561, 2311, 2935, 3237 |
| StyI | CCWWGG | 1 cut(s) | 2486 |
| TaaI | ACNGT | 6 cut(s) | 797, 1085, 2421, 2499, 2992, 3085 |
| TaiI | ACGT | 8 cut(s) | 78, 378, 529, 574, 1030, 2094, 3229, 3266 |
| TatI | WGTACW | 4 cut(s) | 870, 1221, 1476, 3159 |
| TscAI | CASTG | 2 cut(s) | 2052, 3088 |
| TseFI | GTSAC | 4 cut(s) | 434, 947, 1412, 1462 |
| TseI | GCWGC | 4 cut(s) | 1572, 2888, 2998, 3252 |
| Tsp45I | GTSAC | 4 cut(s) | 434, 947, 1412, 1462 |
| TspGWI | ACGGA | 3 cut(s) | 357, 422, 2094 |
| TspRI | CASTG | 2 cut(s) | 2052, 3088 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 139, 2177 |
| Vha464I | CTTAAG | 1 cut(s) | 2060 |
| VneI | GTGCAC | 1 cut(s) | 2048 |
| VpaK11BI | GGWCC | 3 cut(s) | 1760, 2029, 2908 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1137 |
| XapI | RAATTY | 7 cut(s) | 1690, 1733, 1766, 1777, 1843, 1993, 2174 |
| XbaI | TCTAGA | 2 cut(s) | 1234, 2464 |
| XceI | RCATGY | 4 cut(s) | 470, 824, 1833, 2215 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 39, 60, 286 |
| XmiI | GTMKAC | 1 cut(s) | 2308 |
| XmnI | GAANNNNTTC | 3 cut(s) | 743, 1185, 1527 |
| XspI | CTAG | 7 cut(s) | 728, 1017, 1235, 1322, 1460, 2384, 2465 |
| ZrmI | AGTACT | 1 cut(s) | 3161 |
| Zsp2I | ATGCAT | 1 cut(s) | 1497 |