TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 205 | 4e-50 | TIR domain |
| TIR_2 | PF13676 | 26 - 123 | 2e-15 | TIR domain |
| NB-ARC | PF00931 | 220 - 376 | 2.9e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 444 - 510 | 2.5e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 649 - 956 | 1.4e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 703 - 893 | 6e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 977 - 1111 | 4.5e-08 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 516 |
| AbsI | CCTCGAGG | 1 cut(s) | 2114 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 139, 2162 |
| AccII | CGCG | 2 cut(s) | 106, 3242 |
| AccIII | TCCGGA | 2 cut(s) | 2818, 2998 |
| AciI | CCGC | 2 cut(s) | 1633, 2538 |
| AclWI | GGATC | 6 cut(s) | 202, 359, 372, 1923, 2619, 3009 |
| AcoI | YGGCCR | 2 cut(s) | 483, 1420 |
| AcuI | CTGAAG | 4 cut(s) | 423, 857, 2267, 2309 |
| AdeI | CACNNNGTG | 1 cut(s) | 285 |
| AfaI | GTAC | 5 cut(s) | 1220, 1606, 2206, 2230, 3320 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1136, 2162 |
| AflII | CTTAAG | 2 cut(s) | 1400, 2045 |
| AflIII | ACRYGT | 2 cut(s) | 104, 3240 |
| AhlI | ACTAGT | 1 cut(s) | 1601 |
| AjnI | CCWGG | 3 cut(s) | 1546, 2929, 3201 |
| Alw21I | GWGCWC | 3 cut(s) | 14, 2037, 3310 |
| Alw26I | GTCTC | 8 cut(s) | 457, 792, 1031, 1229, 1809, 1930, 2256, 2309 |
| Alw44I | GTGCAC | 1 cut(s) | 2033 |
| AlwI | GGATC | 6 cut(s) | 202, 359, 372, 1923, 2619, 3009 |
| Ama87I | CYCGRG | 2 cut(s) | 327, 2114 |
| Aor13HI | TCCGGA | 2 cut(s) | 2818, 2998 |
| AoxI | GGCC | 3 cut(s) | 483, 1420, 1744 |
| ApaLI | GTGCAC | 1 cut(s) | 2033 |
| ApeKI | GCWGC | 4 cut(s) | 1557, 2801, 2992, 3216 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2308, 2340 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1182, 1524, 2571, 2779 |
| AspS9I | GGNCC | 2 cut(s) | 1745, 2014 |
| AsuC2I | CCSGG | 2 cut(s) | 209, 2226 |
| AsuHPI | GGTGA | 3 cut(s) | 252, 998, 1024 |
| AvaI | CYCGRG | 2 cut(s) | 327, 2114 |
| AvaII | GGWCC | 1 cut(s) | 2014 |
| AxyI | CCTNAGG | 1 cut(s) | 1131 |
| BaeGI | GKGCMC | 2 cut(s) | 2037, 2696 |
| BalI | TGGCCA | 1 cut(s) | 485 |
| BamHI | GGATCC | 1 cut(s) | 364 |
| BanII | GRGCYC | 2 cut(s) | 2265, 3310 |
| BbsI | GAAGAC | 3 cut(s) | 1544, 1891, 1949 |
| Bbv12I | GWGCWC | 3 cut(s) | 14, 2037, 3310 |
| BbvI | GCAGC | 4 cut(s) | 1569, 2788, 2979, 3203 |
| BceAI | ACGGC | 2 cut(s) | 1407, 1545 |
| BciT130I | CCWGG | 3 cut(s) | 1548, 2931, 3203 |
| BciVI | GTATCC | 2 cut(s) | 1803, 3199 |
| BcnI | CCSGG | 2 cut(s) | 209, 2226 |
| BcoDI | GTCTC | 8 cut(s) | 457, 792, 1031, 1229, 1809, 1930, 2256, 2309 |
| BcuI | ACTAGT | 1 cut(s) | 1601 |
| BfaI | CTAG | 7 cut(s) | 728, 1014, 1232, 1319, 1532, 1602, 2378 |
| BfrI | CTTAAG | 2 cut(s) | 1400, 2045 |
| BfuI | GTATCC | 2 cut(s) | 1803, 3199 |
| BglII | AGATCT | 3 cut(s) | 201, 1228, 2428 |
| BisI | GCNGC | 4 cut(s) | 1558, 2802, 2993, 3217 |
| BlpI | GCTNAGC | 3 cut(s) | 48, 414, 723 |
| BlsI | GCNGC | 4 cut(s) | 1559, 2803, 2994, 3218 |
| Bme1390I | CCNGG | 5 cut(s) | 209, 1548, 2226, 2931, 3203 |
| Bme18I | GGWCC | 1 cut(s) | 2014 |
| BmeT110I | CYCGRG | 2 cut(s) | 327, 2114 |
| BmgT120I | GGNCC | 2 cut(s) | 1745, 2014 |
| BmiI | GGNNCC | 4 cut(s) | 366, 877, 1747, 2356 |
| BmrFI | CCNGG | 5 cut(s) | 209, 1548, 2226, 2931, 3203 |
| BmrI | ACTGGG | 1 cut(s) | 824 |
| BmuI | ACTGGG | 1 cut(s) | 824 |
| BpiI | GAAGAC | 3 cut(s) | 1544, 1891, 1949 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2960, 2992, 3253, 3285 |
| BpmI | CTGGAG | 1 cut(s) | 161 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1189, 2805 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 48, 414, 723 |
| BpuEI | CTTGAG | 6 cut(s) | 103, 677, 1112, 1657, 1994, 3101 |
| BpuMI | CCSGG | 2 cut(s) | 209, 2226 |
| Bsa29I | ATCGAT | 1 cut(s) | 2621 |
| BsaJI | CCNNGG | 3 cut(s) | 207, 2062, 2399 |
| BsaWI | WCCGGW | 4 cut(s) | 2608, 2818, 2875, 2998 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2306, 2336, 2598, 2628 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1136, 2162 |
| Bse118I | RCCGGY | 2 cut(s) | 346, 2332 |
| Bse1I | ACTGG | 4 cut(s) | 144, 830, 1676, 1893 |
| Bse21I | CCTNAGG | 1 cut(s) | 1131 |
| Bse3DI | GCAATG | 1 cut(s) | 2025 |
| BseAI | TCCGGA | 2 cut(s) | 2818, 2998 |
| BseBI | CCWGG | 3 cut(s) | 1548, 2931, 3203 |
| BseCI | ATCGAT | 1 cut(s) | 2621 |
| BseDI | CCNNGG | 3 cut(s) | 207, 2062, 2399 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1136, 2162 |
| BseMI | GCAATG | 1 cut(s) | 2025 |
| BseMII | CTCAG | 9 cut(s) | 39, 189, 1122, 1137, 1792, 2205, 2819, 2958, 3405 |
| BseNI | ACTGG | 4 cut(s) | 144, 830, 1676, 1893 |
| BseRI | GAGGAG | 3 cut(s) | 16, 1019, 3427 |
| BseSI | GKGCMC | 2 cut(s) | 2037, 2696 |
| BseXI | GCAGC | 4 cut(s) | 1569, 2788, 2979, 3203 |
| Bsh1236I | CGCG | 2 cut(s) | 106, 3242 |
| Bsh1285I | CGRYCG | 1 cut(s) | 178 |
| BshFI | GGCC | 3 cut(s) | 485, 1422, 1746 |
| BshVI | ATCGAT | 1 cut(s) | 2621 |
| BsiEI | CGRYCG | 1 cut(s) | 178 |
| BsiHKAI | GWGCWC | 3 cut(s) | 14, 2037, 3310 |
| BsiHKCI | CYCGRG | 2 cut(s) | 327, 2114 |
| BsiSI | CCGG | 8 cut(s) | 209, 347, 2225, 2333, 2609, 2819, 2876, 2999 |
| BslFI | GGGAC | 1 cut(s) | 1268 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 139, 361, 448, 1136, 2162 |
| BsmAI | GTCTC | 8 cut(s) | 457, 792, 1031, 1229, 1809, 1930, 2256, 2309 |
| BsmBI | CGTCTC | 1 cut(s) | 1031 |
| BsmFI | GGGAC | 1 cut(s) | 1268 |
| BsmI | GAATGC | 1 cut(s) | 1688 |
| BsnI | GGCC | 3 cut(s) | 485, 1422, 1746 |
| BsoBI | CYCGRG | 2 cut(s) | 327, 2114 |
| Bsp1286I | GDGCHC | 5 cut(s) | 14, 2037, 2265, 2696, 3310 |
| Bsp13I | TCCGGA | 2 cut(s) | 2818, 2998 |
| Bsp1407I | TGTACA | 1 cut(s) | 1218 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 48, 414, 723 |
| BspACI | CCGC | 2 cut(s) | 1633, 2538 |
| BspANI | GGCC | 3 cut(s) | 485, 1422, 1746 |
| BspCNI | CTCAG | 9 cut(s) | 40, 190, 1123, 1138, 1791, 2206, 2818, 2957, 3404 |
| BspDI | ATCGAT | 1 cut(s) | 2621 |
| BspEI | TCCGGA | 2 cut(s) | 2818, 2998 |
| BspFNI | CGCG | 2 cut(s) | 106, 3242 |
| BspHI | TCATGA | 2 cut(s) | 1596, 3363 |
| BspLI | GGNNCC | 4 cut(s) | 366, 877, 1747, 2356 |
| BspPI | GGATC | 6 cut(s) | 202, 359, 372, 1923, 2619, 3009 |
| BspTI | CTTAAG | 2 cut(s) | 1400, 2045 |
| BsrDI | GCAATG | 1 cut(s) | 2025 |
| BsrFI | RCCGGY | 2 cut(s) | 346, 2332 |
| BsrGI | TGTACA | 1 cut(s) | 1218 |
| BsrI | ACTGG | 4 cut(s) | 144, 830, 1676, 1893 |
| BssAI | RCCGGY | 2 cut(s) | 346, 2332 |
| BssECI | CCNNGG | 3 cut(s) | 207, 2062, 2399 |
| BssT1I | CCWWGG | 1 cut(s) | 2399 |
| Bst2UI | CCWGG | 3 cut(s) | 1548, 2931, 3203 |
| Bst4CI | ACNGT | 5 cut(s) | 1082, 2412, 2731, 2738, 3211 |
| Bst6I | CTCTTC | 4 cut(s) | 1650, 1812, 2538, 3290 |
| BstAFI | CTTAAG | 2 cut(s) | 1400, 2045 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2550 |
| BstAUI | TGTACA | 1 cut(s) | 1218 |
| BstC8I | GCNNGC | 4 cut(s) | 300, 2542, 2840, 2897 |
| BstDSI | CCRYGG | 1 cut(s) | 2062 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1134 |
| BstFNI | CGCG | 2 cut(s) | 106, 3242 |
| BstMAI | GTCTC | 8 cut(s) | 457, 792, 1031, 1229, 1809, 1930, 2256, 2309 |
| BstMCI | CGRYCG | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1069, 2389, 2550, 2973, 3053 |
| BstNI | CCWGG | 3 cut(s) | 1548, 2931, 3203 |
| BstNSI | RCATGY | 2 cut(s) | 470, 1818 |
| BstSCI | CCNGG | 5 cut(s) | 207, 1546, 2224, 2929, 3201 |
| BstSLI | GKGCMC | 2 cut(s) | 2037, 2696 |
| BstUI | CGCG | 2 cut(s) | 106, 3242 |
| BstV1I | GCAGC | 4 cut(s) | 1569, 2788, 2979, 3203 |
| BstV2I | GAAGAC | 3 cut(s) | 1544, 1891, 1949 |
| BstX2I | RGATCY | 7 cut(s) | 194, 201, 364, 1228, 1915, 2428, 2611 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 451 |
| BstYI | RGATCY | 7 cut(s) | 194, 201, 364, 1228, 1915, 2428, 2611 |
| Bsu15I | ATCGAT | 1 cut(s) | 2621 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1131 |
| BsuI | GTATCC | 2 cut(s) | 1803, 3199 |
| BsuRI | GGCC | 3 cut(s) | 485, 1422, 1746 |
| BsuTUI | ATCGAT | 1 cut(s) | 2621 |
| BtgI | CCRYGG | 1 cut(s) | 2062 |
| BtsI | GCAGTG | 1 cut(s) | 2037 |
| BtsIMutI | CAGTG | 2 cut(s) | 439, 2037 |
| Cac8I | GCNNGC | 4 cut(s) | 300, 2542, 2840, 2897 |
| CciI | TCATGA | 2 cut(s) | 1596, 3363 |
| Cfr10I | RCCGGY | 2 cut(s) | 346, 2332 |
| Cfr13I | GGNCC | 2 cut(s) | 1745, 2014 |
| ClaI | ATCGAT | 1 cut(s) | 2621 |
| CseI | GACGC | 2 cut(s) | 2495, 3248 |
| Csp6I | GTAC | 5 cut(s) | 1219, 1605, 2205, 2229, 3319 |
| CviQI | GTAC | 5 cut(s) | 1219, 1605, 2205, 2229, 3319 |
| DraI | TTTAAA | 2 cut(s) | 2242, 3121 |
| DraIII | CACNNNGTG | 1 cut(s) | 285 |
| EaeI | YGGCCR | 2 cut(s) | 483, 1420 |
| Eam1104I | CTCTTC | 4 cut(s) | 1650, 1812, 2538, 3290 |
| EarI | CTCTTC | 4 cut(s) | 1650, 1812, 2538, 3290 |
| Ecl136II | GAGCTC | 1 cut(s) | 3308 |
| Eco130I | CCWWGG | 1 cut(s) | 2399 |
| Eco24I | GRGCYC | 2 cut(s) | 2265, 3310 |
| Eco32I | GATATC | 1 cut(s) | 226 |
| Eco47I | GGWCC | 1 cut(s) | 2014 |
| Eco53kI | GAGCTC | 1 cut(s) | 3308 |
| Eco57I | CTGAAG | 4 cut(s) | 423, 857, 2267, 2309 |
| Eco81I | CCTNAGG | 1 cut(s) | 1131 |
| Eco88I | CYCGRG | 2 cut(s) | 327, 2114 |
| EcoICRI | GAGCTC | 1 cut(s) | 3308 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1134 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1745 |
| EcoRI | GAATTC | 2 cut(s) | 339, 2567 |
| EcoRII | CCWGG | 3 cut(s) | 1546, 2929, 3201 |
| EcoRV | GATATC | 1 cut(s) | 226 |
| EcoT14I | CCWWGG | 1 cut(s) | 2399 |
| EcoT22I | ATGCAT | 1 cut(s) | 1494 |
| EcoT38I | GRGCYC | 2 cut(s) | 2265, 3310 |
| ErhI | CCWWGG | 1 cut(s) | 2399 |
| Esp3I | CGTCTC | 1 cut(s) | 1031 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3205, 3237 |
| FaqI | GGGAC | 1 cut(s) | 1268 |
| FauI | CCCGC | 1 cut(s) | 2545 |
| FauNDI | CATATG | 1 cut(s) | 3153 |
| Fnu4HI | GCNGC | 4 cut(s) | 1558, 2802, 2993, 3217 |
| FriOI | GRGCYC | 2 cut(s) | 2265, 3310 |
| Fsp4HI | GCNGC | 4 cut(s) | 1558, 2802, 2993, 3217 |
| FspBI | CTAG | 7 cut(s) | 728, 1014, 1232, 1319, 1532, 1602, 2378 |
| GluI | GCNGC | 4 cut(s) | 1558, 2802, 2993, 3217 |
| GsuI | CTGGAG | 1 cut(s) | 161 |
| HaeIII | GGCC | 3 cut(s) | 485, 1422, 1746 |
| HapII | CCGG | 8 cut(s) | 209, 347, 2225, 2333, 2609, 2819, 2876, 2999 |
| HgaI | GACGC | 2 cut(s) | 2495, 3248 |
| HincII | GTYRAC | 4 cut(s) | 805, 1477, 1862, 2055 |
| HindII | GTYRAC | 4 cut(s) | 805, 1477, 1862, 2055 |
| HindIII | AAGCTT | 2 cut(s) | 2348, 2561 |
| HpaII | CCGG | 8 cut(s) | 209, 347, 2225, 2333, 2609, 2819, 2876, 2999 |
| HphI | GGTGA | 3 cut(s) | 252, 998, 1024 |
| Hpy166II | GTNNAC | 7 cut(s) | 524, 805, 1477, 1862, 2035, 2055, 2734 |
| Hpy8I | GTNNAC | 7 cut(s) | 524, 805, 1477, 1862, 2035, 2055, 2734 |
| Hpy99I | CGWCG | 4 cut(s) | 77, 176, 377, 3242 |
| HpyCH4III | ACNGT | 5 cut(s) | 1082, 2412, 2731, 2738, 3211 |
| HpyCH4IV | ACGT | 7 cut(s) | 75, 375, 526, 571, 1024, 2823, 3227 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1069, 2389, 2550, 2973, 3053 |
| HpySE526I | ACGT | 7 cut(s) | 75, 375, 526, 571, 1024, 2823, 3227 |
| Kpn2I | TCCGGA | 2 cut(s) | 2818, 2998 |
| LmnI | GCTCC | 4 cut(s) | 211, 2360, 2989, 3305 |
| Lsp1109I | GCAGC | 4 cut(s) | 1569, 2788, 2979, 3203 |
| MaeI | CTAG | 7 cut(s) | 728, 1014, 1232, 1319, 1532, 1602, 2378 |
| MaeII | ACGT | 7 cut(s) | 75, 375, 526, 571, 1024, 2823, 3227 |
| MaeIII | GTNAC | 4 cut(s) | 434, 944, 1006, 1409 |
| MflI | RGATCY | 7 cut(s) | 194, 201, 364, 1228, 1915, 2428, 2611 |
| MhlI | GDGCHC | 5 cut(s) | 14, 2037, 2265, 2696, 3310 |
| MlsI | TGGCCA | 1 cut(s) | 485 |
| MluI | ACGCGT | 2 cut(s) | 104, 3240 |
| MluNI | TGGCCA | 1 cut(s) | 485 |
| MlyI | GAGTC | 5 cut(s) | 323, 2383, 3271, 3382, 3383 |
| MmeI | TCCRAC | 6 cut(s) | 44, 396, 440, 592, 946, 1186 |
| Mox20I | TGGCCA | 1 cut(s) | 485 |
| Mph1103I | ATGCAT | 1 cut(s) | 1494 |
| MroI | TCCGGA | 2 cut(s) | 2818, 2998 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1182, 1524, 2571, 2779 |
| MscI | TGGCCA | 1 cut(s) | 485 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1575, 1961, 2030 |
| Msp20I | TGGCCA | 1 cut(s) | 485 |
| MspA1I | CMGCKG | 3 cut(s) | 799, 2838, 2895 |
| MspCI | CTTAAG | 2 cut(s) | 1400, 2045 |
| MspI | CCGG | 8 cut(s) | 209, 347, 2225, 2333, 2609, 2819, 2876, 2999 |
| MspR9I | CCNGG | 5 cut(s) | 209, 1548, 2226, 2931, 3203 |
| Mva1269I | GAATGC | 1 cut(s) | 1688 |
| MvaI | CCWGG | 3 cut(s) | 1548, 2931, 3203 |
| MvnI | CGCG | 2 cut(s) | 106, 3242 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1069, 2389, 2550, 2973, 3053 |
| NciI | CCSGG | 2 cut(s) | 209, 2226 |
| NdeI | CATATG | 1 cut(s) | 3153 |
| NlaIV | GGNNCC | 4 cut(s) | 366, 877, 1747, 2356 |
| NmuCI | GTSAC | 3 cut(s) | 434, 944, 1409 |
| NsiI | ATGCAT | 1 cut(s) | 1494 |
| NspI | RCATGY | 2 cut(s) | 470, 1818 |
| PaeR7I | CTCGAG | 1 cut(s) | 2114 |
| PagI | TCATGA | 2 cut(s) | 1596, 3363 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2121 |
| PctI | GAATGC | 1 cut(s) | 1688 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1182, 1524, 2571, 2779 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 139, 2162 |
| PfoI | TCCNGGA | 2 cut(s) | 2929, 3201 |
| PkrI | GCNGC | 4 cut(s) | 1559, 2803, 2994, 3218 |
| Ple19I | CGATCG | 1 cut(s) | 178 |
| PleI | GAGTC | 5 cut(s) | 322, 2382, 3270, 3381, 3383 |
| PpsI | GAGTC | 5 cut(s) | 322, 2382, 3270, 3381, 3383 |
| PsiI | TTATAA | 1 cut(s) | 516 |
| Psp124BI | GAGCTC | 1 cut(s) | 3310 |
| Psp6I | CCWGG | 3 cut(s) | 1546, 2929, 3201 |
| PspGI | CCWGG | 3 cut(s) | 1546, 2929, 3201 |
| PspN4I | GGNNCC | 4 cut(s) | 366, 877, 1747, 2356 |
| PspPI | GGNCC | 2 cut(s) | 1745, 2014 |
| PspXI | VCTCGAGB | 1 cut(s) | 2114 |
| PsuI | RGATCY | 7 cut(s) | 194, 201, 364, 1228, 1915, 2428, 2611 |
| PvuI | CGATCG | 1 cut(s) | 178 |
| PvuII | CAGCTG | 3 cut(s) | 799, 2838, 2895 |
| RsaI | GTAC | 5 cut(s) | 1220, 1606, 2206, 2230, 3320 |
| RsaNI | GTAC | 5 cut(s) | 1219, 1605, 2205, 2229, 3319 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1575, 1961, 2030 |
| SacI | GAGCTC | 1 cut(s) | 3310 |
| SatI | GCNGC | 4 cut(s) | 1558, 2802, 2993, 3217 |
| Sau96I | GGNCC | 2 cut(s) | 1745, 2014 |
| SchI | GAGTC | 5 cut(s) | 323, 2383, 3271, 3382, 3383 |
| ScrFI | CCNGG | 5 cut(s) | 209, 1548, 2226, 2931, 3203 |
| SduI | GDGCHC | 5 cut(s) | 14, 2037, 2265, 2696, 3310 |
| Sfr274I | CTCGAG | 1 cut(s) | 2114 |
| SinI | GGWCC | 1 cut(s) | 2014 |
| SlaI | CTCGAG | 1 cut(s) | 2114 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1575, 1961, 2030 |
| SmlI | CTYRAG | 9 cut(s) | 82, 656, 1091, 1400, 1636, 1973, 2045, 2114, 3080 |
| SmoI | CTYRAG | 9 cut(s) | 82, 656, 1091, 1400, 1636, 1973, 2045, 2114, 3080 |
| SpeI | ACTAGT | 1 cut(s) | 1601 |
| SsiI | CCGC | 2 cut(s) | 1633, 2538 |
| SspI | AATATT | 2 cut(s) | 1934, 2778 |
| SspMI | CTAG | 7 cut(s) | 728, 1014, 1232, 1319, 1532, 1602, 2378 |
| SstI | GAGCTC | 1 cut(s) | 3310 |
| StyD4I | CCNGG | 5 cut(s) | 207, 1546, 2224, 2929, 3201 |
| StyI | CCWWGG | 1 cut(s) | 2399 |
| TaaI | ACNGT | 5 cut(s) | 1082, 2412, 2731, 2738, 3211 |
| TaiI | ACGT | 7 cut(s) | 78, 378, 529, 574, 1027, 2826, 3230 |
| TatI | WGTACW | 2 cut(s) | 1218, 2204 |
| TscAI | CASTG | 2 cut(s) | 439, 2037 |
| TseFI | GTSAC | 3 cut(s) | 434, 944, 1409 |
| TseI | GCWGC | 4 cut(s) | 1557, 2801, 2992, 3216 |
| Tsp45I | GTSAC | 3 cut(s) | 434, 944, 1409 |
| TspGWI | ACGGA | 4 cut(s) | 357, 2079, 2844, 3385 |
| TspRI | CASTG | 2 cut(s) | 439, 2037 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 139, 2162 |
| Vha464I | CTTAAG | 2 cut(s) | 1400, 2045 |
| VneI | GTGCAC | 1 cut(s) | 2033 |
| VpaK11BI | GGWCC | 1 cut(s) | 2014 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1134 |
| XbaI | TCTAGA | 2 cut(s) | 1231, 2377 |
| XceI | RCATGY | 2 cut(s) | 470, 1818 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 60, 286 |
| XhoI | CTCGAG | 1 cut(s) | 2114 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1182, 1524, 2571, 2779 |
| XspI | CTAG | 7 cut(s) | 728, 1014, 1232, 1319, 1532, 1602, 2378 |
| Zsp2I | ATGCAT | 1 cut(s) | 1494 |