TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 38 - 183 | 5.6e-41 | TIR domain |
| TIR_2 | PF13676 | 40 - 102 | 8.9e-08 | TIR domain |
| NB-ARC | PF00931 | 195 - 355 | 1.9e-23 | NB-ARC domain |
| NACHT | PF05729 | 207 - 348 | 1.5e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 423 - 494 | 9.4e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 630 - 741 | 1.9e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 683 - 875 | 1.1e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 781 - 854 | 1.2e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 927 - 1071 | 8.2e-09 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3103 |
| AccI | GTMKAC | 2 cut(s) | 751, 1344 |
| AccIII | TCCGGA | 1 cut(s) | 145 |
| AciI | CCGC | 5 cut(s) | 607, 854, 1306, 2731, 3342 |
| AclWI | GGATC | 9 cut(s) | 293, 306, 888, 2512, 2525, 2596, 2618, 2942, 3031 |
| AcoI | YGGCCR | 1 cut(s) | 906 |
| AcsI | RAATTY | 7 cut(s) | 675, 762, 1942, 2102, 2409, 2651, 2793 |
| AcuI | CTGAAG | 6 cut(s) | 102, 357, 1019, 1042, 1667, 2170 |
| AdeI | CACNNNGTG | 1 cut(s) | 222 |
| AfaI | GTAC | 8 cut(s) | 455, 972, 1939, 2294, 2447, 2602, 2904, 3197 |
| AfeI | AGCGCT | 1 cut(s) | 2183 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2636, 2855 |
| AflIII | ACRYGT | 1 cut(s) | 967 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2917 |
| AhlI | ACTAGT | 1 cut(s) | 973 |
| AjiI | CACGTC | 1 cut(s) | 385 |
| AjnI | CCWGG | 5 cut(s) | 173, 1492, 1753, 2782, 2997 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 93, 125, 193, 225, 348, 380, 2976, 3008 |
| Alw21I | GWGCWC | 5 cut(s) | 153, 1095, 2684, 2896, 3193 |
| Alw26I | GTCTC | 6 cut(s) | 52, 54, 307, 1975, 2030, 2820 |
| Alw44I | GTGCAC | 1 cut(s) | 3189 |
| AlwI | GGATC | 9 cut(s) | 293, 306, 888, 2512, 2525, 2596, 2618, 2942, 3031 |
| Aor13HI | TCCGGA | 1 cut(s) | 145 |
| Aor51HI | AGCGCT | 1 cut(s) | 2183 |
| AoxI | GGCC | 4 cut(s) | 906, 1684, 2995, 3183 |
| ApaI | GGGCCC | 1 cut(s) | 3187 |
| ApaLI | GTGCAC | 1 cut(s) | 3189 |
| ApeKI | GCWGC | 5 cut(s) | 72, 327, 1651, 2076, 3246 |
| ApoI | RAATTY | 7 cut(s) | 675, 762, 1942, 2102, 2409, 2651, 2793 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 545, 577 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 792, 1032, 1055, 1467, 2616 |
| AspLEI | GCGC | 1 cut(s) | 2184 |
| AspS9I | GGNCC | 5 cut(s) | 1685, 1884, 2935, 3183, 3184 |
| AsuC2I | CCSGG | 2 cut(s) | 910, 1889 |
| AsuHPI | GGTGA | 5 cut(s) | 1018, 1802, 3023, 3032, 3181 |
| AvaII | GGWCC | 2 cut(s) | 1884, 2935 |
| AxyI | CCTNAGG | 1 cut(s) | 2931 |
| BaeGI | GKGCMC | 2 cut(s) | 3187, 3193 |
| BamHI | GGATCC | 2 cut(s) | 298, 2517 |
| BanII | GRGCYC | 3 cut(s) | 153, 1095, 3187 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1640, 1672 |
| BauI | CACGAG | 1 cut(s) | 2677 |
| BbsI | GAAGAC | 5 cut(s) | 1118, 1283, 2352, 2427, 3331 |
| Bbv12I | GWGCWC | 5 cut(s) | 153, 1095, 2684, 2896, 3193 |
| BbvCI | CCTCAGC | 1 cut(s) | 1414 |
| BbvI | GCAGC | 5 cut(s) | 84, 339, 1638, 2063, 3258 |
| BccI | CCATC | 6 cut(s) | 146, 622, 809, 1250, 1264, 1969 |
| BceAI | ACGGC | 2 cut(s) | 31, 2909 |
| BciT130I | CCWGG | 5 cut(s) | 175, 1494, 1755, 2784, 2999 |
| BciVI | GTATCC | 1 cut(s) | 1743 |
| BclI | TGATCA | 1 cut(s) | 1807 |
| BcnI | CCSGG | 2 cut(s) | 910, 1889 |
| BcoDI | GTCTC | 6 cut(s) | 52, 54, 307, 1975, 2030, 2820 |
| BcuI | ACTAGT | 1 cut(s) | 973 |
| BfmI | CTRYAG | 6 cut(s) | 752, 1869, 2008, 2151, 3144, 3375 |
| BfoI | RGCGCY | 1 cut(s) | 2185 |
| BfuAI | ACCTGC | 1 cut(s) | 3103 |
| BfuI | GTATCC | 1 cut(s) | 1743 |
| BisI | GCNGC | 5 cut(s) | 73, 328, 1652, 2077, 3247 |
| BlsI | GCNGC | 5 cut(s) | 74, 329, 1653, 2078, 3248 |
| BmcAI | AGTACT | 1 cut(s) | 2447 |
| Bme1390I | CCNGG | 7 cut(s) | 175, 910, 1494, 1755, 1889, 2784, 2999 |
| Bme18I | GGWCC | 2 cut(s) | 1884, 2935 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2917 |
| BmgBI | CACGTC | 1 cut(s) | 385 |
| BmgT120I | GGNCC | 5 cut(s) | 1685, 1884, 2935, 3183, 3184 |
| BmiI | GGNNCC | 9 cut(s) | 45, 300, 1687, 1886, 2519, 2543, 2937, 3184, 3185 |
| BmrFI | CCNGG | 7 cut(s) | 175, 910, 1494, 1755, 1889, 2784, 2999 |
| BmrI | ACTGGG | 1 cut(s) | 3025 |
| BmsI | GCATC | 5 cut(s) | 391, 514, 708, 1168, 3149 |
| BmuI | ACTGGG | 1 cut(s) | 3025 |
| BpiI | GAAGAC | 5 cut(s) | 1118, 1283, 2352, 2427, 3331 |
| BpmI | CTGGAG | 3 cut(s) | 2402, 2613, 2759 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1414 |
| BpuEI | CTTGAG | 4 cut(s) | 1729, 1897, 1961, 2065 |
| BpuMI | CCSGG | 2 cut(s) | 910, 1889 |
| BsaBI | GATNNNNATC | 2 cut(s) | 879, 1614 |
| BsaJI | CCNNGG | 4 cut(s) | 909, 1131, 1887, 2998 |
| BsaWI | WCCGGW | 3 cut(s) | 145, 886, 1765 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2817, 2847 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2636, 2855 |
| Bse1I | ACTGG | 5 cut(s) | 900, 926, 2769, 2876, 3020 |
| Bse21I | CCTNAGG | 1 cut(s) | 2931 |
| Bse3DI | GCAATG | 3 cut(s) | 1293, 1965, 2297 |
| Bse8I | GATNNNNATC | 2 cut(s) | 879, 1614 |
| BseAI | TCCGGA | 1 cut(s) | 145 |
| BseBI | CCWGG | 5 cut(s) | 175, 1494, 1755, 2784, 2999 |
| BseDI | CCNNGG | 4 cut(s) | 909, 1131, 1887, 2998 |
| BseGI | GGATG | 7 cut(s) | 505, 633, 1463, 1774, 1957, 1961, 2864 |
| BseJI | GATNNNNATC | 2 cut(s) | 879, 1614 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2636, 2855 |
| BseMI | GCAATG | 3 cut(s) | 1293, 1965, 2297 |
| BseMII | CTCAG | 5 cut(s) | 1380, 1428, 2410, 2852, 2922 |
| BseNI | ACTGG | 5 cut(s) | 900, 926, 2769, 2876, 3020 |
| BseRI | GAGGAG | 2 cut(s) | 143, 2216 |
| BseSI | GKGCMC | 2 cut(s) | 3187, 3193 |
| BseXI | GCAGC | 5 cut(s) | 84, 339, 1638, 2063, 3258 |
| Bsh1285I | CGRYCG | 2 cut(s) | 186, 2688 |
| BshFI | GGCC | 4 cut(s) | 908, 1686, 2997, 3185 |
| BsiEI | CGRYCG | 2 cut(s) | 186, 2688 |
| BsiHKAI | GWGCWC | 5 cut(s) | 153, 1095, 2684, 2896, 3193 |
| BsiSI | CCGG | 5 cut(s) | 146, 887, 909, 1766, 1889 |
| BslFI | GGGAC | 3 cut(s) | 28, 283, 2161 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2636, 2855 |
| BsmAI | GTCTC | 6 cut(s) | 52, 54, 307, 1975, 2030, 2820 |
| BsmBI | CGTCTC | 1 cut(s) | 54 |
| BsmFI | GGGAC | 3 cut(s) | 28, 283, 2161 |
| BsmI | GAATGC | 2 cut(s) | 257, 2490 |
| BsnI | GGCC | 4 cut(s) | 908, 1686, 2997, 3185 |
| Bsp120I | GGGCCC | 1 cut(s) | 3183 |
| Bsp1286I | GDGCHC | 6 cut(s) | 153, 1095, 2684, 2896, 3187, 3193 |
| Bsp13I | TCCGGA | 1 cut(s) | 145 |
| Bsp1407I | TGTACA | 1 cut(s) | 3195 |
| BspACI | CCGC | 5 cut(s) | 607, 854, 1306, 2731, 3342 |
| BspANI | GGCC | 4 cut(s) | 908, 1686, 2997, 3185 |
| BspCNI | CTCAG | 5 cut(s) | 1381, 1427, 2409, 2851, 2923 |
| BspEI | TCCGGA | 1 cut(s) | 145 |
| BspLI | GGNNCC | 9 cut(s) | 45, 300, 1687, 1886, 2519, 2543, 2937, 3184, 3185 |
| BspMAI | CTGCAG | 3 cut(s) | 2012, 2155, 3379 |
| BspMI | ACCTGC | 1 cut(s) | 3103 |
| BspPI | GGATC | 9 cut(s) | 293, 306, 888, 2512, 2525, 2596, 2618, 2942, 3031 |
| BspQI | GCTCTTC | 3 cut(s) | 1038, 1482, 3207 |
| BsrDI | GCAATG | 3 cut(s) | 1293, 1965, 2297 |
| BsrGI | TGTACA | 1 cut(s) | 3195 |
| BsrI | ACTGG | 5 cut(s) | 900, 926, 2769, 2876, 3020 |
| BssECI | CCNNGG | 4 cut(s) | 909, 1131, 1887, 2998 |
| BssNAI | GTATAC | 1 cut(s) | 1345 |
| BssSI | CACGAG | 1 cut(s) | 2677 |
| BssT1I | CCWWGG | 1 cut(s) | 1131 |
| Bst1107I | GTATAC | 1 cut(s) | 1345 |
| Bst2BI | CACGAG | 1 cut(s) | 2677 |
| Bst2UI | CCWGG | 5 cut(s) | 175, 1494, 1755, 2784, 2999 |
| Bst4CI | ACNGT | 9 cut(s) | 492, 520, 1349, 1479, 1920, 2390, 2686, 2990, 3195 |
| Bst6I | CTCTTC | 6 cut(s) | 96, 351, 1038, 1482, 1596, 3207 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2673 |
| BstAUI | TGTACA | 1 cut(s) | 3195 |
| BstC8I | GCNNGC | 5 cut(s) | 227, 430, 486, 1310, 2488 |
| BstF5I | GGATG | 7 cut(s) | 505, 633, 1463, 1774, 1957, 1961, 2864 |
| BstH2I | RGCGCY | 1 cut(s) | 2185 |
| BstHHI | GCGC | 1 cut(s) | 2184 |
| BstMAI | GTCTC | 6 cut(s) | 52, 54, 307, 1975, 2030, 2820 |
| BstMCI | CGRYCG | 2 cut(s) | 186, 2688 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 425, 1099, 2506, 2673, 2891 |
| BstNI | CCWGG | 5 cut(s) | 175, 1494, 1755, 2784, 2999 |
| BstNSI | RCATGY | 3 cut(s) | 971, 1302, 3105 |
| BstSCI | CCNGG | 7 cut(s) | 173, 908, 1492, 1753, 1887, 2782, 2997 |
| BstSFI | CTRYAG | 6 cut(s) | 752, 1869, 2008, 2151, 3144, 3375 |
| BstSLI | GKGCMC | 2 cut(s) | 3187, 3193 |
| BstV1I | GCAGC | 5 cut(s) | 84, 339, 1638, 2063, 3258 |
| BstV2I | GAAGAC | 5 cut(s) | 1118, 1283, 2352, 2427, 3331 |
| BstX2I | RGATCY | 4 cut(s) | 298, 2517, 2623, 2947 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1182, 2289 |
| BstYI | RGATCY | 4 cut(s) | 298, 2517, 2623, 2947 |
| BstZ17I | GTATAC | 1 cut(s) | 1345 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2931 |
| BsuI | GTATCC | 1 cut(s) | 1743 |
| BsuRI | GGCC | 4 cut(s) | 908, 1686, 2997, 3185 |
| BtrI | CACGTC | 1 cut(s) | 385 |
| BtsCI | GGATG | 7 cut(s) | 505, 633, 1463, 1774, 1957, 1961, 2864 |
| BtsI | GCAGTG | 1 cut(s) | 156 |
| BtsIMutI | CAGTG | 6 cut(s) | 156, 488, 2194, 2404, 2727, 3191 |
| BveI | ACCTGC | 1 cut(s) | 3103 |
| Cac8I | GCNNGC | 5 cut(s) | 227, 430, 486, 1310, 2488 |
| CfoI | GCGC | 1 cut(s) | 2184 |
| Cfr13I | GGNCC | 5 cut(s) | 1685, 1884, 2935, 3183, 3184 |
| CseI | GACGC | 2 cut(s) | 563, 1509 |
| CsiI | ACCWGGT | 1 cut(s) | 1753 |
| Csp6I | GTAC | 8 cut(s) | 454, 971, 1938, 2293, 2446, 2601, 2903, 3196 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 473, 508 |
| CviQI | GTAC | 8 cut(s) | 454, 971, 1938, 2293, 2446, 2601, 2903, 3196 |
| DraI | TTTAAA | 1 cut(s) | 1671 |
| DraIII | CACNNNGTG | 1 cut(s) | 222 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2917 |
| EaeI | YGGCCR | 1 cut(s) | 906 |
| Eam1104I | CTCTTC | 6 cut(s) | 96, 351, 1038, 1482, 1596, 3207 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2917 |
| EarI | CTCTTC | 6 cut(s) | 96, 351, 1038, 1482, 1596, 3207 |
| Ecl136II | GAGCTC | 2 cut(s) | 151, 1093 |
| Eco130I | CCWWGG | 1 cut(s) | 1131 |
| Eco24I | GRGCYC | 3 cut(s) | 153, 1095, 3187 |
| Eco47I | GGWCC | 2 cut(s) | 1884, 2935 |
| Eco47III | AGCGCT | 1 cut(s) | 2183 |
| Eco53kI | GAGCTC | 2 cut(s) | 151, 1093 |
| Eco57I | CTGAAG | 6 cut(s) | 102, 357, 1019, 1042, 1667, 2170 |
| Eco81I | CCTNAGG | 1 cut(s) | 2931 |
| EcoICRI | GAGCTC | 2 cut(s) | 151, 1093 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1884, 2935, 3183 |
| EcoRII | CCWGG | 5 cut(s) | 173, 1492, 1753, 2782, 2997 |
| EcoT14I | CCWWGG | 1 cut(s) | 1131 |
| EcoT22I | ATGCAT | 4 cut(s) | 257, 1183, 1437, 3164 |
| EcoT38I | GRGCYC | 3 cut(s) | 153, 1095, 3187 |
| ErhI | CCWWGG | 1 cut(s) | 1131 |
| Esp3I | CGTCTC | 1 cut(s) | 54 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 93, 125, 348, 380, 843, 875, 3110, 3142 |
| FaqI | GGGAC | 3 cut(s) | 28, 283, 2161 |
| FauNDI | CATATG | 2 cut(s) | 1000, 3295 |
| FbaI | TGATCA | 1 cut(s) | 1807 |
| FblI | GTMKAC | 2 cut(s) | 751, 1344 |
| Fnu4HI | GCNGC | 5 cut(s) | 73, 328, 1652, 2077, 3247 |
| FokI | GGATG | 7 cut(s) | 492, 640, 1470, 1781, 1944, 1948, 2871 |
| FriOI | GRGCYC | 3 cut(s) | 153, 1095, 3187 |
| Fsp4HI | GCNGC | 5 cut(s) | 73, 328, 1652, 2077, 3247 |
| GlaI | GCGC | 1 cut(s) | 2183 |
| GluI | GCNGC | 5 cut(s) | 73, 328, 1652, 2077, 3247 |
| GsuI | CTGGAG | 3 cut(s) | 2402, 2613, 2759 |
| HaeII | RGCGCY | 1 cut(s) | 2185 |
| HaeIII | GGCC | 4 cut(s) | 908, 1686, 2997, 3185 |
| HapII | CCGG | 5 cut(s) | 146, 887, 909, 1766, 1889 |
| HgaI | GACGC | 2 cut(s) | 563, 1509 |
| HhaI | GCGC | 1 cut(s) | 2184 |
| Hin6I | GCGC | 1 cut(s) | 2182 |
| HinP1I | GCGC | 1 cut(s) | 2182 |
| HindIII | AAGCTT | 5 cut(s) | 107, 362, 1673, 2132, 2507 |
| HpaII | CCGG | 5 cut(s) | 146, 887, 909, 1766, 1889 |
| HphI | GGTGA | 5 cut(s) | 1018, 1802, 3023, 3032, 3181 |
| Hpy166II | GTNNAC | 5 cut(s) | 752, 1345, 1499, 1643, 3191 |
| Hpy8I | GTNNAC | 5 cut(s) | 752, 1345, 1499, 1643, 3191 |
| Hpy99I | CGWCG | 1 cut(s) | 3365 |
| HpyCH4III | ACNGT | 9 cut(s) | 492, 520, 1349, 1479, 1920, 2390, 2686, 2990, 3195 |
| HpyCH4IV | ACGT | 2 cut(s) | 384, 560 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 425, 1099, 2506, 2673, 2891 |
| HpySE526I | ACGT | 2 cut(s) | 384, 560 |
| HspAI | GCGC | 1 cut(s) | 2182 |
| Kpn2I | TCCGGA | 1 cut(s) | 145 |
| Ksp22I | TGATCA | 1 cut(s) | 1807 |
| LguI | GCTCTTC | 3 cut(s) | 1038, 1482, 3207 |
| LmnI | GCTCC | 9 cut(s) | 43, 148, 156, 495, 889, 2203, 2249, 2307, 2547 |
| Lsp1109I | GCAGC | 5 cut(s) | 84, 339, 1638, 2063, 3258 |
| LweI | GCATC | 5 cut(s) | 391, 514, 708, 1168, 3149 |
| MabI | ACCWGGT | 1 cut(s) | 1753 |
| MaeII | ACGT | 2 cut(s) | 384, 560 |
| MaeIII | GTNAC | 8 cut(s) | 820, 845, 976, 1862, 2224, 2833, 3011, 3257 |
| MfeI | CAATTG | 5 cut(s) | 2175, 2549, 2662, 2671, 3027 |
| MflI | RGATCY | 4 cut(s) | 298, 2517, 2623, 2947 |
| MhlI | GDGCHC | 6 cut(s) | 153, 1095, 2684, 2896, 3187, 3193 |
| MlyI | GAGTC | 4 cut(s) | 828, 2032, 2338, 2822 |
| MmeI | TCCRAC | 3 cut(s) | 526, 1028, 2569 |
| Mph1103I | ATGCAT | 4 cut(s) | 257, 1183, 1437, 3164 |
| MroI | TCCGGA | 1 cut(s) | 145 |
| MroXI | GAANNNNTTC | 5 cut(s) | 792, 1032, 1055, 1467, 2616 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3167 |
| MspA1I | CMGCKG | 2 cut(s) | 1039, 1308 |
| MspI | CCGG | 5 cut(s) | 146, 887, 909, 1766, 1889 |
| MspR9I | CCNGG | 7 cut(s) | 175, 910, 1494, 1755, 1889, 2784, 2999 |
| MunI | CAATTG | 5 cut(s) | 2175, 2549, 2662, 2671, 3027 |
| Mva1269I | GAATGC | 2 cut(s) | 257, 2490 |
| MvaI | CCWGG | 5 cut(s) | 175, 1494, 1755, 2784, 2999 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 425, 1099, 2506, 2673, 2891 |
| NciI | CCSGG | 2 cut(s) | 910, 1889 |
| NdeI | CATATG | 2 cut(s) | 1000, 3295 |
| NlaIV | GGNNCC | 9 cut(s) | 45, 300, 1687, 1886, 2519, 2543, 2937, 3184, 3185 |
| NmuCI | GTSAC | 3 cut(s) | 820, 976, 3011 |
| NsiI | ATGCAT | 4 cut(s) | 257, 1183, 1437, 3164 |
| NspI | RCATGY | 3 cut(s) | 971, 1302, 3105 |
| PciI | ACATGT | 1 cut(s) | 967 |
| PciSI | GCTCTTC | 3 cut(s) | 1038, 1482, 3207 |
| PctI | GAATGC | 2 cut(s) | 257, 2490 |
| PdmI | GAANNNNTTC | 5 cut(s) | 792, 1032, 1055, 1467, 2616 |
| PfeI | GAWTC | 7 cut(s) | 527, 942, 1615, 1954, 2048, 2095, 2699 |
| PflFI | GACNNNGTC | 1 cut(s) | 1503 |
| PfoI | TCCNGGA | 1 cut(s) | 2782 |
| PkrI | GCNGC | 5 cut(s) | 74, 329, 1653, 2078, 3248 |
| Ple19I | CGATCG | 1 cut(s) | 186 |
| PleI | GAGTC | 4 cut(s) | 827, 2031, 2337, 2822 |
| PpsI | GAGTC | 4 cut(s) | 827, 2031, 2337, 2822 |
| PpuMI | RGGWCCY | 2 cut(s) | 1884, 2935 |
| PscI | ACATGT | 1 cut(s) | 967 |
| Psp124BI | GAGCTC | 2 cut(s) | 153, 1095 |
| Psp5II | RGGWCCY | 2 cut(s) | 1884, 2935 |
| Psp6I | CCWGG | 5 cut(s) | 173, 1492, 1753, 2782, 2997 |
| PspGI | CCWGG | 5 cut(s) | 173, 1492, 1753, 2782, 2997 |
| PspN4I | GGNNCC | 9 cut(s) | 45, 300, 1687, 1886, 2519, 2543, 2937, 3184, 3185 |
| PspOMI | GGGCCC | 1 cut(s) | 3183 |
| PspPI | GGNCC | 5 cut(s) | 1685, 1884, 2935, 3183, 3184 |
| PspPPI | RGGWCCY | 2 cut(s) | 1884, 2935 |
| PstI | CTGCAG | 3 cut(s) | 2012, 2155, 3379 |
| PsuI | RGATCY | 4 cut(s) | 298, 2517, 2623, 2947 |
| PsyI | GACNNNGTC | 1 cut(s) | 1503 |
| PvuI | CGATCG | 1 cut(s) | 186 |
| PvuII | CAGCTG | 1 cut(s) | 1039 |
| RsaI | GTAC | 8 cut(s) | 455, 972, 1939, 2294, 2447, 2602, 2904, 3197 |
| RsaNI | GTAC | 8 cut(s) | 454, 971, 1938, 2293, 2446, 2601, 2903, 3196 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3167 |
| SacI | GAGCTC | 2 cut(s) | 153, 1095 |
| SapI | GCTCTTC | 3 cut(s) | 1038, 1482, 3207 |
| SatI | GCNGC | 5 cut(s) | 73, 328, 1652, 2077, 3247 |
| Sau96I | GGNCC | 5 cut(s) | 1685, 1884, 2935, 3183, 3184 |
| ScaI | AGTACT | 1 cut(s) | 2447 |
| SchI | GAGTC | 4 cut(s) | 828, 2032, 2338, 2822 |
| ScrFI | CCNGG | 7 cut(s) | 175, 910, 1494, 1755, 1889, 2784, 2999 |
| SduI | GDGCHC | 6 cut(s) | 153, 1095, 2684, 2896, 3187, 3193 |
| SexAI | ACCWGGT | 1 cut(s) | 1753 |
| SfaNI | GCATC | 5 cut(s) | 391, 514, 708, 1168, 3149 |
| SfcI | CTRYAG | 6 cut(s) | 752, 1869, 2008, 2151, 3144, 3375 |
| SinI | GGWCC | 2 cut(s) | 1884, 2935 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3167 |
| SmlI | CTYRAG | 4 cut(s) | 1708, 1876, 1976, 2080 |
| SmoI | CTYRAG | 4 cut(s) | 1708, 1876, 1976, 2080 |
| SpeI | ACTAGT | 1 cut(s) | 973 |
| SsiI | CCGC | 5 cut(s) | 607, 854, 1306, 2731, 3342 |
| SspI | AATATT | 3 cut(s) | 1804, 2017, 3368 |
| SstI | GAGCTC | 2 cut(s) | 153, 1095 |
| StyD4I | CCNGG | 7 cut(s) | 173, 908, 1492, 1753, 1887, 2782, 2997 |
| StyI | CCWWGG | 1 cut(s) | 1131 |
| TaaI | ACNGT | 9 cut(s) | 492, 520, 1349, 1479, 1920, 2390, 2686, 2990, 3195 |
| TaiI | ACGT | 2 cut(s) | 387, 563 |
| TaqI | TCGA | 3 cut(s) | 90, 165, 345 |
| TatI | WGTACW | 4 cut(s) | 970, 2445, 2600, 3195 |
| TfiI | GAWTC | 7 cut(s) | 527, 942, 1615, 1954, 2048, 2095, 2699 |
| TscAI | CASTG | 6 cut(s) | 163, 495, 2194, 2404, 2727, 3198 |
| TseFI | GTSAC | 3 cut(s) | 820, 976, 3011 |
| TseI | GCWGC | 5 cut(s) | 72, 327, 1651, 2076, 3246 |
| Tsp45I | GTSAC | 3 cut(s) | 820, 976, 3011 |
| TspGWI | ACGGA | 2 cut(s) | 1222, 2907 |
| TspRI | CASTG | 6 cut(s) | 163, 495, 2194, 2404, 2727, 3198 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1503 |
| VneI | GTGCAC | 1 cut(s) | 3189 |
| VpaK11BI | GGWCC | 2 cut(s) | 1884, 2935 |
| XapI | RAATTY | 7 cut(s) | 675, 762, 1942, 2102, 2409, 2651, 2793 |
| XbaI | TCTAGA | 1 cut(s) | 3091 |
| XceI | RCATGY | 3 cut(s) | 971, 1302, 3105 |
| XmiI | GTMKAC | 2 cut(s) | 751, 1344 |
| XmnI | GAANNNNTTC | 5 cut(s) | 792, 1032, 1055, 1467, 2616 |
| ZrmI | AGTACT | 1 cut(s) | 2447 |
| Zsp2I | ATGCAT | 4 cut(s) | 257, 1183, 1437, 3164 |