TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 188 | 1.7e-52 | TIR domain |
| TIR_2 | PF13676 | 21 - 127 | 2.2e-14 | TIR domain |
| NB-ARC | PF00931 | 212 - 366 | 6.8e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 435 - 504 | 2.2e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 663 - 748 | 5.8e-11 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 668 - 869 | 9.6e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 775 - 844 | 6.8e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 786 - 842 | 1.5e-07 | Leucine rich repeat |
| C-JID | PF20160 | 921 - 1056 | 1.1e-18 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1142 |
| AarI | CACCTGC | 1 cut(s) | 1518 |
| AatII | GACGTC | 2 cut(s) | 642, 1560 |
| Acc16I | TGCGCA | 1 cut(s) | 1446 |
| Acc36I | ACCTGC | 2 cut(s) | 1518, 1710 |
| AccB1I | GGYRCC | 1 cut(s) | 2520 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1483 |
| AccBSI | CCGCTC | 1 cut(s) | 2899 |
| AccI | GTMKAC | 5 cut(s) | 260, 778, 1629, 2464, 2568 |
| AccII | CGCG | 1 cut(s) | 3037 |
| AccIII | TCCGGA | 1 cut(s) | 160 |
| AciI | CCGC | 5 cut(s) | 204, 643, 669, 2897, 2903 |
| AclWI | GGATC | 7 cut(s) | 152, 338, 1199, 2275, 2379, 3018, 3177 |
| AcoI | YGGCCR | 2 cut(s) | 2482, 2601 |
| AcsI | RAATTY | 6 cut(s) | 288, 481, 722, 2231, 2747, 2775 |
| AcuI | CTGAAG | 4 cut(s) | 477, 1052, 1611, 1703 |
| AcyI | GRCGYC | 2 cut(s) | 639, 1557 |
| AfaI | GTAC | 3 cut(s) | 357, 1179, 2789 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1483, 1708, 2803, 2908 |
| AflII | CTTAAG | 1 cut(s) | 2717 |
| AflIII | ACRYGT | 2 cut(s) | 1564, 1837 |
| AjnI | CCWGG | 3 cut(s) | 1522, 2833, 2867 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 564, 596, 1104, 1136, 1639, 1671 |
| AleI | CACNNNNGTG | 1 cut(s) | 2799 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1398, 1430 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw26I | GTCTC | 1 cut(s) | 1021 |
| AlwI | GGATC | 7 cut(s) | 152, 338, 1199, 2275, 2379, 3018, 3177 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1136 |
| Ama87I | CYCGRG | 2 cut(s) | 1940, 2471 |
| Aor13HI | TCCGGA | 1 cut(s) | 160 |
| AoxI | GGCC | 3 cut(s) | 1038, 2482, 2601 |
| ApeKI | GCWGC | 4 cut(s) | 322, 601, 1801, 2827 |
| ApoI | RAATTY | 6 cut(s) | 288, 481, 722, 2231, 2747, 2775 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2293, 2325 |
| AseI | ATTAAT | 1 cut(s) | 3210 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1088, 1116, 1722 |
| AspLEI | GCGC | 3 cut(s) | 1447, 3037, 3311 |
| AspS9I | GGNCC | 2 cut(s) | 3139, 3314 |
| AsuC2I | CCSGG | 1 cut(s) | 2766 |
| AsuHPI | GGTGA | 3 cut(s) | 92, 2253, 2786 |
| AvaI | CYCGRG | 2 cut(s) | 1940, 2471 |
| AvaII | GGWCC | 2 cut(s) | 3139, 3314 |
| AxyI | CCTNAGG | 1 cut(s) | 1707 |
| BalI | TGGCCA | 1 cut(s) | 2603 |
| BanI | GGYRCC | 1 cut(s) | 2520 |
| BauI | CACGAG | 1 cut(s) | 717 |
| BbsI | GAAGAC | 6 cut(s) | 101, 1151, 1459, 1560, 2415, 2802 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvI | GCAGC | 4 cut(s) | 309, 613, 1788, 2814 |
| BccI | CCATC | 4 cut(s) | 1786, 1886, 2560, 2851 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1376, 1410, 2310, 2344, 2921, 2955 |
| BciT130I | CCWGG | 3 cut(s) | 1524, 2835, 2869 |
| BciVI | GTATCC | 1 cut(s) | 1770 |
| BcnI | CCSGG | 1 cut(s) | 2766 |
| BcoDI | GTCTC | 1 cut(s) | 1021 |
| BfaI | CTAG | 5 cut(s) | 578, 732, 1295, 1322, 3255 |
| BfmI | CTRYAG | 1 cut(s) | 3106 |
| BfrI | CTTAAG | 1 cut(s) | 2717 |
| BfuAI | ACCTGC | 2 cut(s) | 1518, 1710 |
| BfuI | GTATCC | 1 cut(s) | 1770 |
| BglII | AGATCT | 3 cut(s) | 443, 1427, 2089 |
| BisI | GCNGC | 5 cut(s) | 204, 323, 602, 1802, 2828 |
| BlsI | GCNGC | 5 cut(s) | 205, 324, 603, 1803, 2829 |
| BmcAI | AGTACT | 1 cut(s) | 1179 |
| Bme1390I | CCNGG | 4 cut(s) | 1524, 2766, 2835, 2869 |
| Bme18I | GGWCC | 2 cut(s) | 3139, 3314 |
| BmeT110I | CYCGRG | 2 cut(s) | 1940, 2471 |
| BmgT120I | GGNCC | 2 cut(s) | 3139, 3314 |
| BmiI | GGNNCC | 6 cut(s) | 853, 1700, 2522, 3140, 3316, 3325 |
| BmrFI | CCNGG | 4 cut(s) | 1524, 2766, 2835, 2869 |
| BmrI | ACTGGG | 4 cut(s) | 1190, 1247, 2397, 3312 |
| BmsI | GCATC | 8 cut(s) | 32, 263, 1452, 2405, 2487, 2839, 3151, 3260 |
| BmuI | ACTGGG | 4 cut(s) | 1190, 1247, 2397, 3312 |
| BpiI | GAAGAC | 6 cut(s) | 101, 1151, 1459, 1560, 2415, 2802 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 211, 243, 698, 730, 700, 732, 1879, 1911 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| BpuEI | CTTGAG | 2 cut(s) | 292, 577 |
| BpuMI | CCSGG | 1 cut(s) | 2766 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaHI | GRCGYC | 2 cut(s) | 639, 1557 |
| BsaWI | WCCGGW | 1 cut(s) | 160 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1483, 1708, 2803, 2908 |
| Bse1I | ACTGG | 8 cut(s) | 605, 1185, 1242, 1380, 1588, 2403, 2667, 3318 |
| Bse21I | CCTNAGG | 1 cut(s) | 1707 |
| Bse3DI | GCAATG | 3 cut(s) | 1326, 2699, 3227 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseAI | TCCGGA | 1 cut(s) | 160 |
| BseBI | CCWGG | 3 cut(s) | 1524, 2835, 2869 |
| BseGI | GGATG | 9 cut(s) | 160, 421, 640, 1467, 1642, 2137, 2420, 2830, 2862 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1483, 1708, 2803, 2908 |
| BseMI | GCAATG | 3 cut(s) | 1326, 2699, 3227 |
| BseMII | CTCAG | 5 cut(s) | 59, 1845, 1877, 2458, 2927 |
| BseNI | ACTGG | 8 cut(s) | 605, 1185, 1242, 1380, 1588, 2403, 2667, 3318 |
| BseRI | GAGGAG | 3 cut(s) | 2191, 2649, 2879 |
| BseXI | GCAGC | 4 cut(s) | 309, 613, 1788, 2814 |
| BseYI | CCCAGC | 1 cut(s) | 2243 |
| BsgI | GTGCAG | 1 cut(s) | 1552 |
| Bsh1236I | CGCG | 1 cut(s) | 3037 |
| BshFI | GGCC | 3 cut(s) | 1040, 2484, 2603 |
| BshNI | GGYRCC | 1 cut(s) | 2520 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1940, 2471 |
| BsiSI | CCGG | 4 cut(s) | 161, 2129, 2318, 2766 |
| BslFI | GGGAC | 2 cut(s) | 1500, 1725 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1483, 1708, 2803, 2908 |
| BsmAI | GTCTC | 1 cut(s) | 1021 |
| BsmBI | CGTCTC | 1 cut(s) | 1021 |
| BsmFI | GGGAC | 2 cut(s) | 1500, 1725 |
| BsmI | GAATGC | 2 cut(s) | 1088, 2353 |
| BsnI | GGCC | 3 cut(s) | 1040, 2484, 2603 |
| BsoBI | CYCGRG | 2 cut(s) | 1940, 2471 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp13I | TCCGGA | 1 cut(s) | 160 |
| BspACI | CCGC | 5 cut(s) | 204, 643, 669, 2897, 2903 |
| BspANI | GGCC | 3 cut(s) | 1040, 2484, 2603 |
| BspCNI | CTCAG | 5 cut(s) | 60, 1846, 1878, 2457, 2928 |
| BspEI | TCCGGA | 1 cut(s) | 160 |
| BspFNI | CGCG | 1 cut(s) | 3037 |
| BspHI | TCATGA | 3 cut(s) | 397, 844, 3337 |
| BspLI | GGNNCC | 6 cut(s) | 853, 1700, 2522, 3140, 3316, 3325 |
| BspMI | ACCTGC | 2 cut(s) | 1518, 1710 |
| BspPI | GGATC | 7 cut(s) | 152, 338, 1199, 2275, 2379, 3018, 3177 |
| BspQI | GCTCTTC | 1 cut(s) | 3279 |
| BspT107I | GGYRCC | 1 cut(s) | 2520 |
| BspTI | CTTAAG | 1 cut(s) | 2717 |
| BsrBI | CCGCTC | 1 cut(s) | 2899 |
| BsrDI | GCAATG | 3 cut(s) | 1326, 2699, 3227 |
| BsrI | ACTGG | 8 cut(s) | 605, 1185, 1242, 1380, 1588, 2403, 2667, 3318 |
| BssNI | GRCGYC | 2 cut(s) | 639, 1557 |
| BssSI | CACGAG | 1 cut(s) | 717 |
| Bst2BI | CACGAG | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 3 cut(s) | 1524, 2835, 2869 |
| Bst4CI | ACNGT | 6 cut(s) | 1292, 1441, 2259, 2654, 2821, 3077 |
| Bst6I | CTCTTC | 5 cut(s) | 1071, 1214, 1237, 1299, 3279 |
| BstACI | GRCGYC | 2 cut(s) | 639, 1557 |
| BstAFI | CTTAAG | 1 cut(s) | 2717 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1471 |
| BstC8I | GCNNGC | 1 cut(s) | 829 |
| BstDEI | CTNAG | 9 cut(s) | 68, 1457, 1707, 1811, 1854, 1886, 2375, 2444, 2936 |
| BstEII | GGTNACC | 1 cut(s) | 1100 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1706 |
| BstF5I | GGATG | 9 cut(s) | 160, 421, 640, 1467, 1642, 2137, 2420, 2830, 2862 |
| BstFNI | CGCG | 1 cut(s) | 3037 |
| BstHHI | GCGC | 3 cut(s) | 1447, 3037, 3311 |
| BstMAI | GTCTC | 1 cut(s) | 1021 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 200, 314, 1471, 3204, 3269 |
| BstNI | CCWGG | 3 cut(s) | 1524, 2835, 2869 |
| BstNSI | RCATGY | 3 cut(s) | 1335, 1568, 1841 |
| BstPI | GGTNACC | 1 cut(s) | 1100 |
| BstSCI | CCNGG | 4 cut(s) | 1522, 2764, 2833, 2867 |
| BstSFI | CTRYAG | 1 cut(s) | 3106 |
| BstUI | CGCG | 1 cut(s) | 3037 |
| BstV1I | GCAGC | 4 cut(s) | 309, 613, 1788, 2814 |
| BstV2I | GAAGAC | 6 cut(s) | 101, 1151, 1459, 1560, 2415, 2802 |
| BstX2I | RGATCY | 5 cut(s) | 443, 1427, 2089, 2371, 3169 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1215, 2492, 3350 |
| BstYI | RGATCY | 5 cut(s) | 443, 1427, 2089, 2371, 3169 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1707 |
| BsuI | GTATCC | 1 cut(s) | 1770 |
| BsuRI | GGCC | 3 cut(s) | 1040, 2484, 2603 |
| BtsCI | GGATG | 9 cut(s) | 160, 421, 640, 1467, 1642, 2137, 2420, 2830, 2862 |
| BtsI | GCAGTG | 2 cut(s) | 117, 2068 |
| BtsIMutI | CAGTG | 5 cut(s) | 53, 117, 2068, 2410, 3325 |
| BveI | ACCTGC | 2 cut(s) | 1518, 1710 |
| Cac8I | GCNNGC | 1 cut(s) | 829 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1136 |
| CciI | TCATGA | 3 cut(s) | 397, 844, 3337 |
| CfoI | GCGC | 3 cut(s) | 1447, 3037, 3311 |
| Cfr13I | GGNCC | 2 cut(s) | 3139, 3314 |
| CseI | GACGC | 1 cut(s) | 2579 |
| Csp6I | GTAC | 3 cut(s) | 356, 1178, 2788 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3041, 3076 |
| CviQI | GTAC | 3 cut(s) | 356, 1178, 2788 |
| DdeI | CTNAG | 9 cut(s) | 68, 1457, 1707, 1811, 1854, 1886, 2375, 2444, 2936 |
| DraI | TTTAAA | 2 cut(s) | 930, 1924 |
| EaeI | YGGCCR | 2 cut(s) | 2482, 2601 |
| Eam1104I | CTCTTC | 5 cut(s) | 1071, 1214, 1237, 1299, 3279 |
| EarI | CTCTTC | 5 cut(s) | 1071, 1214, 1237, 1299, 3279 |
| Eco32I | GATATC | 1 cut(s) | 3070 |
| Eco47I | GGWCC | 2 cut(s) | 3139, 3314 |
| Eco57I | CTGAAG | 4 cut(s) | 477, 1052, 1611, 1703 |
| Eco81I | CCTNAGG | 1 cut(s) | 1707 |
| Eco88I | CYCGRG | 2 cut(s) | 1940, 2471 |
| Eco91I | GGTNACC | 1 cut(s) | 1100 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1706 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3314 |
| EcoO65I | GGTNACC | 1 cut(s) | 1100 |
| EcoRI | GAATTC | 2 cut(s) | 288, 481 |
| EcoRII | CCWGG | 3 cut(s) | 1522, 2833, 2867 |
| EcoRV | GATATC | 1 cut(s) | 3070 |
| EcoT22I | ATGCAT | 1 cut(s) | 256 |
| Esp3I | CGTCTC | 1 cut(s) | 1021 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1104, 1136 |
| FaqI | GGGAC | 2 cut(s) | 1500, 1725 |
| FauI | CCCGC | 2 cut(s) | 662, 2910 |
| FblI | GTMKAC | 5 cut(s) | 260, 778, 1629, 2464, 2568 |
| Fnu4HI | GCNGC | 5 cut(s) | 204, 323, 602, 1802, 2828 |
| FokI | GGATG | 9 cut(s) | 167, 428, 647, 1474, 1649, 2144, 2427, 2817, 2869 |
| Fsp4HI | GCNGC | 5 cut(s) | 204, 323, 602, 1802, 2828 |
| FspBI | CTAG | 5 cut(s) | 578, 732, 1295, 1322, 3255 |
| FspI | TGCGCA | 1 cut(s) | 1446 |
| GlaI | GCGC | 3 cut(s) | 1446, 3036, 3310 |
| GluI | GCNGC | 5 cut(s) | 204, 323, 602, 1802, 2828 |
| GsaI | CCCAGC | 1 cut(s) | 2247 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HaeIII | GGCC | 3 cut(s) | 1040, 2484, 2603 |
| HapII | CCGG | 4 cut(s) | 161, 2129, 2318, 2766 |
| HgaI | GACGC | 1 cut(s) | 2579 |
| HhaI | GCGC | 3 cut(s) | 1447, 3037, 3311 |
| Hin1I | GRCGYC | 2 cut(s) | 639, 1557 |
| Hin6I | GCGC | 3 cut(s) | 1445, 3035, 3309 |
| HinP1I | GCGC | 3 cut(s) | 1445, 3035, 3309 |
| HincII | GTYRAC | 6 cut(s) | 261, 610, 1909, 1984, 2650, 2999 |
| HindII | GTYRAC | 6 cut(s) | 261, 610, 1909, 1984, 2650, 2999 |
| HindIII | AAGCTT | 3 cut(s) | 2114, 2162, 2528 |
| HpaI | GTTAAC | 1 cut(s) | 2650 |
| HpaII | CCGG | 4 cut(s) | 161, 2129, 2318, 2766 |
| HphI | GGTGA | 3 cut(s) | 92, 2253, 2786 |
| Hpy99I | CGWCG | 2 cut(s) | 262, 1292 |
| HpyAV | CCTTC | 9 cut(s) | 45, 397, 749, 842, 851, 1030, 1595, 1952, 3236 |
| HpyCH4III | ACNGT | 6 cut(s) | 1292, 1441, 2259, 2654, 2821, 3077 |
| HpyCH4IV | ACGT | 3 cut(s) | 639, 1557, 2597 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 200, 314, 1471, 3204, 3269 |
| HpyF3I | CTNAG | 9 cut(s) | 68, 1457, 1707, 1811, 1854, 1886, 2375, 2444, 2936 |
| HpySE526I | ACGT | 3 cut(s) | 639, 1557, 2597 |
| Hsp92I | GRCGYC | 2 cut(s) | 639, 1557 |
| HspAI | GCGC | 3 cut(s) | 1445, 3035, 3309 |
| Kpn2I | TCCGGA | 1 cut(s) | 160 |
| KspAI | GTTAAC | 1 cut(s) | 2650 |
| LguI | GCTCTTC | 1 cut(s) | 3279 |
| LmnI | GCTCC | 3 cut(s) | 851, 1479, 2904 |
| Lsp1109I | GCAGC | 4 cut(s) | 309, 613, 1788, 2814 |
| LweI | GCATC | 8 cut(s) | 32, 263, 1452, 2405, 2487, 2839, 3151, 3260 |
| MaeI | CTAG | 5 cut(s) | 578, 732, 1295, 1322, 3255 |
| MaeII | ACGT | 3 cut(s) | 639, 1557, 2597 |
| MbiI | CCGCTC | 1 cut(s) | 2899 |
| MfeI | CAATTG | 2 cut(s) | 207, 1992 |
| MflI | RGATCY | 5 cut(s) | 443, 1427, 2089, 2371, 3169 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MlsI | TGGCCA | 1 cut(s) | 2603 |
| MluNI | TGGCCA | 1 cut(s) | 2603 |
| MlyI | GAGTC | 6 cut(s) | 584, 1636, 1897, 2490, 2731, 2880 |
| MmeI | TCCRAC | 2 cut(s) | 562, 2988 |
| Mox20I | TGGCCA | 1 cut(s) | 2603 |
| Mph1103I | ATGCAT | 1 cut(s) | 256 |
| MroI | TCCGGA | 1 cut(s) | 160 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1088, 1116, 1722 |
| MscI | TGGCCA | 1 cut(s) | 2603 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1610, 1637, 2799 |
| Msp20I | TGGCCA | 1 cut(s) | 2603 |
| MspCI | CTTAAG | 1 cut(s) | 2717 |
| MspI | CCGG | 4 cut(s) | 161, 2129, 2318, 2766 |
| MspR9I | CCNGG | 4 cut(s) | 1524, 2766, 2835, 2869 |
| MunI | CAATTG | 2 cut(s) | 207, 1992 |
| Mva1269I | GAATGC | 2 cut(s) | 1088, 2353 |
| MvaI | CCWGG | 3 cut(s) | 1524, 2835, 2869 |
| MvnI | CGCG | 1 cut(s) | 3037 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 200, 314, 1471, 3204, 3269 |
| NciI | CCSGG | 1 cut(s) | 2766 |
| NlaIV | GGNNCC | 6 cut(s) | 853, 1700, 2522, 3140, 3316, 3325 |
| NmuCI | GTSAC | 8 cut(s) | 80, 878, 1639, 1889, 2259, 2309, 2378, 3124 |
| NsbI | TGCGCA | 1 cut(s) | 1446 |
| NsiI | ATGCAT | 1 cut(s) | 256 |
| NspI | RCATGY | 3 cut(s) | 1335, 1568, 1841 |
| OliI | CACNNNNGTG | 1 cut(s) | 2799 |
| PaeR7I | CTCGAG | 1 cut(s) | 1940 |
| PagI | TCATGA | 3 cut(s) | 397, 844, 3337 |
| PaqCI | CACCTGC | 1 cut(s) | 1518 |
| PciI | ACATGT | 2 cut(s) | 1564, 1837 |
| PciSI | GCTCTTC | 1 cut(s) | 3279 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1760 |
| PctI | GAATGC | 2 cut(s) | 1088, 2353 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1088, 1116, 1722 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1483 |
| PfoI | TCCNGGA | 1 cut(s) | 2764 |
| PkrI | GCNGC | 5 cut(s) | 205, 324, 603, 1803, 2829 |
| PleI | GAGTC | 6 cut(s) | 584, 1636, 1896, 2490, 2730, 2880 |
| PpsI | GAGTC | 6 cut(s) | 584, 1636, 1896, 2490, 2730, 2880 |
| PpuMI | RGGWCCY | 1 cut(s) | 3314 |
| PscI | ACATGT | 2 cut(s) | 1564, 1837 |
| PshBI | ATTAAT | 1 cut(s) | 3210 |
| PsiI | TTATAA | 1 cut(s) | 1142 |
| Psp5II | RGGWCCY | 1 cut(s) | 3314 |
| Psp6I | CCWGG | 3 cut(s) | 1522, 2833, 2867 |
| PspEI | GGTNACC | 1 cut(s) | 1100 |
| PspFI | CCCAGC | 1 cut(s) | 2243 |
| PspGI | CCWGG | 3 cut(s) | 1522, 2833, 2867 |
| PspN4I | GGNNCC | 6 cut(s) | 853, 1700, 2522, 3140, 3316, 3325 |
| PspPI | GGNCC | 2 cut(s) | 3139, 3314 |
| PspPPI | RGGWCCY | 1 cut(s) | 3314 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1136 |
| PsuI | RGATCY | 5 cut(s) | 443, 1427, 2089, 2371, 3169 |
| RsaI | GTAC | 3 cut(s) | 357, 1179, 2789 |
| RsaNI | GTAC | 3 cut(s) | 356, 1178, 2788 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1610, 1637, 2799 |
| SalI | GTCGAC | 1 cut(s) | 259 |
| SapI | GCTCTTC | 1 cut(s) | 3279 |
| SatI | GCNGC | 5 cut(s) | 204, 323, 602, 1802, 2828 |
| Sau96I | GGNCC | 2 cut(s) | 3139, 3314 |
| ScaI | AGTACT | 1 cut(s) | 1179 |
| SchI | GAGTC | 6 cut(s) | 584, 1636, 1897, 2490, 2731, 2880 |
| ScrFI | CCNGG | 4 cut(s) | 1524, 2766, 2835, 2869 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SfaNI | GCATC | 8 cut(s) | 32, 263, 1452, 2405, 2487, 2839, 3151, 3260 |
| SfcI | CTRYAG | 1 cut(s) | 3106 |
| Sfr274I | CTCGAG | 1 cut(s) | 1940 |
| SinI | GGWCC | 2 cut(s) | 3139, 3314 |
| SlaI | CTCGAG | 1 cut(s) | 1940 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1610, 1637, 2799 |
| SmlI | CTYRAG | 4 cut(s) | 271, 592, 1940, 2717 |
| SmoI | CTYRAG | 4 cut(s) | 271, 592, 1940, 2717 |
| SsiI | CCGC | 5 cut(s) | 204, 643, 669, 2897, 2903 |
| SspI | AATATT | 4 cut(s) | 935, 1317, 2098, 3202 |
| SspMI | CTAG | 5 cut(s) | 578, 732, 1295, 1322, 3255 |
| StyD4I | CCNGG | 4 cut(s) | 1522, 2764, 2833, 2867 |
| TaaI | ACNGT | 6 cut(s) | 1292, 1441, 2259, 2654, 2821, 3077 |
| TaiI | ACGT | 3 cut(s) | 642, 1560, 2600 |
| TaqI | TCGA | 7 cut(s) | 218, 260, 1360, 1806, 1941, 2499, 2813 |
| TatI | WGTACW | 1 cut(s) | 1177 |
| TauI | GCSGC | 1 cut(s) | 206 |
| TscAI | CASTG | 5 cut(s) | 53, 124, 2068, 2410, 3325 |
| TseFI | GTSAC | 8 cut(s) | 80, 878, 1639, 1889, 2259, 2309, 2378, 3124 |
| TseI | GCWGC | 4 cut(s) | 322, 601, 1801, 2827 |
| Tsp45I | GTSAC | 8 cut(s) | 80, 878, 1639, 1889, 2259, 2309, 2378, 3124 |
| TspGWI | ACGGA | 5 cut(s) | 880, 1490, 1752, 1753, 3131 |
| TspRI | CASTG | 5 cut(s) | 53, 124, 2068, 2410, 3325 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1483 |
| Vha464I | CTTAAG | 1 cut(s) | 2717 |
| VpaK11BI | GGWCC | 2 cut(s) | 3139, 3314 |
| VspI | ATTAAT | 1 cut(s) | 3210 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1706 |
| XapI | RAATTY | 6 cut(s) | 288, 481, 722, 2231, 2747, 2775 |
| XbaI | TCTAGA | 1 cut(s) | 1294 |
| XceI | RCATGY | 3 cut(s) | 1335, 1568, 1841 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2559, 2747 |
| XhoI | CTCGAG | 1 cut(s) | 1940 |
| XmiI | GTMKAC | 5 cut(s) | 260, 778, 1629, 2464, 2568 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1088, 1116, 1722 |
| XspI | CTAG | 5 cut(s) | 578, 732, 1295, 1322, 3255 |
| ZraI | GACGTC | 2 cut(s) | 640, 1558 |
| ZrmI | AGTACT | 1 cut(s) | 1179 |
| Zsp2I | ATGCAT | 1 cut(s) | 256 |